ClCG07G000870 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCCTAACCATATTCCTACAATTGTCACTGTCGCCGTCGCCACCACCGACGAAGATAAGAGCTCAAAAACAACAATCGAAGAGACCGATCAAATCAGCAACGAAATGGGCAGTGGGCGCTCCTACGAGTGCGTATTTTGCAAACGAGGGTTCACAACAGCTCAAGCCCTAGGCGGCCACATGAACATCCATCGCAAAGATCGTGTTAAAACCAAGCCTAATACCCCCTCTAAGCCTGAACCCTTCAATAACCATCATTCAACTCTTCGCCCGACAACGACAACGGCCACGACGACAATATCTCATCACCAATCTTTTCAAACCTATTTCCCCACTTCTTCCACTTGGTGTTTGGGTACTACTACTACACCACCCCATGATCATCAATTCTCATATGTACATAACAACAATCCTCAAGTTTTGAATACTTTCAAGGATCAAAATTGGACGACAACCAACATGAGCCTCGCCTCGCAGTCGTTGCCTACCCTTGCCTCGACCAATCGTCGAGACAAGGGATCGGATGGCAATGGTGGTGACTACAATGATGATAATGATGATGAACTTGATTTGGAGCTTCGACTCGGGCATGATCGGTAGTAGTAGTAATAGTAATATTATATAATTCAATGTTTTTTCCTATGATATATAATTTGTGTGTGCAGTTATATTTTTATATATATCTATATATATATATATCTATATAAATCTCTATATATATTTTTGTTGTGTGTATAGACATGGGGTTTTGTATTTTCCTTTTTGAAGAGAGAGCATTATTTGAATTTGGTGCATCATCATTATAAGGATTTTCGAATAAAGGAAAAGGCAGTACAAAAATTTGGATTATTGAGAGATACAAAATATCGCCGCCGTCCTCCGGTGCCGGCCGACCGTTTGCTGCTGCTGCCGCCGCCGCCCTCTATTGTTTTTGTAGGATCCATATAA ATGGACCCTAACCATATTCCTACAATTGTCACTGTCGCCGTCGCCACCACCGACGAAGATAAGAGCTCAAAAACAACAATCGAAGAGACCGATCAAATCAGCAACGAAATGGGCAGTGGGCGCTCCTACGAGTGCGTATTTTGCAAACGAGGGTTCACAACAGCTCAAGCCCTAGGCGGCCACATGAACATCCATCGCAAAGATCGTGTTAAAACCAAGCCTAATACCCCCTCTAAGCCTGAACCCTTCAATAACCATCATTCAACTCTTCGCCCGACAACGACAACGGCCACGACGACAATATCTCATCACCAATCTTTTCAAACCTATTTCCCCACTTCTTCCACTTGGTGTTTGGGTACTACTACTACACCACCCCATGATCATCAATTCTCATATGTACATAACAACAATCCTCAAGTTTTGAATACTTTCAAGGATCAAAATTGGACGACAACCAACATGAGCCTCGCCTCGCAGTCGTTGCCTACCCTTGCCTCGACCAATCGTCGAGACAAGGGATCGGATGGCAATGGTGGTGACTACAATGATGATAATGATGATGAACTTGATTTGGAGCTTCGACTCGGGCATGATCGAGAGCATTATTTGAATTTGGTGCATCATCATTATAAGGATTTTCGAATAAAGGAAAAGGCAGTACAAAAATTTGGATTATTGAGAGATACAAAATATCGCCGCCGTCCTCCGGTGCCGGCCGACCGTTTGCTGCTGCTGCCGCCGCCGCCCTCTATTGTTTTTGTAGGATCCATATAA ATGGACCCTAACCATATTCCTACAATTGTCACTGTCGCCGTCGCCACCACCGACGAAGATAAGAGCTCAAAAACAACAATCGAAGAGACCGATCAAATCAGCAACGAAATGGGCAGTGGGCGCTCCTACGAGTGCGTATTTTGCAAACGAGGGTTCACAACAGCTCAAGCCCTAGGCGGCCACATGAACATCCATCGCAAAGATCGTGTTAAAACCAAGCCTAATACCCCCTCTAAGCCTGAACCCTTCAATAACCATCATTCAACTCTTCGCCCGACAACGACAACGGCCACGACGACAATATCTCATCACCAATCTTTTCAAACCTATTTCCCCACTTCTTCCACTTGGTGTTTGGGTACTACTACTACACCACCCCATGATCATCAATTCTCATATGTACATAACAACAATCCTCAAGTTTTGAATACTTTCAAGGATCAAAATTGGACGACAACCAACATGAGCCTCGCCTCGCAGTCGTTGCCTACCCTTGCCTCGACCAATCGTCGAGACAAGGGATCGGATGGCAATGGTGGTGACTACAATGATGATAATGATGATGAACTTGATTTGGAGCTTCGACTCGGGCATGATCGAGAGCATTATTTGAATTTGGTGCATCATCATTATAAGGATTTTCGAATAAAGGAAAAGGCAGTACAAAAATTTGGATTATTGAGAGATACAAAATATCGCCGCCGTCCTCCGGTGCCGGCCGACCGTTTGCTGCTGCTGCCGCCGCCGCCCTCTATTGTTTTTGTAGGATCCATATAA MDPNHIPTIVTVAVATTDEDKSSKTTIEETDQISNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPNTPSKPEPFNNHHSTLRPTTTTATTTISHHQSFQTYFPTSSTWCLGTTTTPPHDHQFSYVHNNNPQVLNTFKDQNWTTTNMSLASQSLPTLASTNRRDKGSDGNGGDYNDDNDDELDLELRLGHDREHYLNLVHHHYKDFRIKEKAVQKFGLLRDTKYRRRPPVPADRLLLLPPPPSIVFVGSI Homology
BLAST of ClCG07G000870 vs. NCBI nr
Match: XP_038888824.1 (protein LATE FLOWERING-like [Benincasa hispida]) HSP 1 Score: 342.4 bits (877), Expect = 3.3e-90 Identity = 175/201 (87.06%), Postives = 179/201 (89.05%), Query Frame = 0
BLAST of ClCG07G000870 vs. NCBI nr
Match: XP_004149183.1 (transcriptional regulator SUPERMAN [Cucumis sativus]) HSP 1 Score: 323.6 bits (828), Expect = 1.6e-84 Identity = 170/204 (83.33%), Postives = 182/204 (89.22%), Query Frame = 0
BLAST of ClCG07G000870 vs. NCBI nr
Match: KAA0066293.1 (transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]) HSP 1 Score: 321.2 bits (822), Expect = 7.9e-84 Identity = 172/203 (84.73%), Postives = 184/203 (90.64%), Query Frame = 0
BLAST of ClCG07G000870 vs. NCBI nr
Match: XP_016901597.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]) HSP 1 Score: 321.2 bits (822), Expect = 7.9e-84 Identity = 172/203 (84.73%), Postives = 184/203 (90.64%), Query Frame = 0
BLAST of ClCG07G000870 vs. NCBI nr
Match: KAE8650710.1 (hypothetical protein Csa_011458 [Cucumis sativus]) HSP 1 Score: 281.6 bits (719), Expect = 7.0e-72 Identity = 146/169 (86.39%), Postives = 154/169 (91.12%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07 Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.8e-07 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.4e-05 Identity = 59/179 (32.96%), Postives = 80/179 (44.69%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy Swiss-Prot
Match: Q6S591 (Zinc finger protein JAGGED OS=Arabidopsis thaliana OX=3702 GN=JAG PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.9e-04 Identity = 39/110 (35.45%), Postives = 47/110 (42.73%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy TrEMBL
Match: A0A5A7VDP2 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003440 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 3.8e-84 Identity = 172/203 (84.73%), Postives = 184/203 (90.64%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy TrEMBL
Match: A0A1S4E031 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103494911 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 3.8e-84 Identity = 172/203 (84.73%), Postives = 184/203 (90.64%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy TrEMBL
Match: A0A6J1JZP2 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491156 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60 Identity = 145/213 (68.08%), Postives = 160/213 (75.12%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy TrEMBL
Match: A0A6J1HUE7 (transcriptional regulator TAC1-like OS=Cucurbita maxima OX=3661 GN=LOC111466951 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 5.6e-59 Identity = 138/206 (66.99%), Postives = 151/206 (73.30%), Query Frame = 0
BLAST of ClCG07G000870 vs. ExPASy TrEMBL
Match: A0A6J1EXQ3 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111437442 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 9.5e-59 Identity = 147/222 (66.22%), Postives = 159/222 (71.62%), Query Frame = 0
BLAST of ClCG07G000870 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.6e-10 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of ClCG07G000870 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 ) HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08 Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 0
BLAST of ClCG07G000870 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.7e-07 Identity = 58/179 (32.40%), Postives = 89/179 (49.72%), Query Frame = 0
BLAST of ClCG07G000870 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 ) HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07 Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of ClCG07G000870 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 4.9e-07 Identity = 55/199 (27.64%), Postives = 88/199 (44.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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