CaUC09G170990 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCCTCTCTTCTTTTCAAATTAAACTGGCCATGGCTGCAGCCGATAGCCAGAACTTCAACCTCCCTCCCGGATTCCGATTCTATCCGACTGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCCGCCTTGTTGCCTTGCCACCCCGATGTCATTCCCGATCTCAACCTCTTCACCTACGATCCTTGGGAGCTAGAAGGTATAATTATTTGTTAGATGATATAATATTAAATTAGTTTTTAAGTGTTTAAGATTATTTATTTATTAGATGTGGAAGGAAAAGTTTGGTTGCTGATTCGTAGTGTTTTAGGGAAGGCGTTGGGAGAGGGAAACCGTTGGTATTTCTACAGCAGAAAAATTGATGTTCGAGTTACTGATAATGGGTATTGGAATCCATTGGGAAGAGATGACCCTGTTCTCTCCACCGCCACCTCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTTCACGTTCAAGACGCCGCCGCCGGACCTCTCAAAACTAACTGGATAATGCATGAGTATCGTCTTGCCGACACTGCCGCCTCTTCTTCTTCCTCCTCCAGACGCCGTGGACGTCCGAAAAGAGTACGCCACCTCATCTCTCCTCAAACCAATTTTCCATTTTTTTTTTAAAAAAATAAATGTTAAAAGAAAATACTTTATTAATATTTCTTTTACCTACTTAAAAAAACGCTTTTTTTTTAGAGGAATATCTTTTCTTATGGGGGGAAATGTTTTTTTCCCCCTACAAAATCAATCTTTCTATAAATATTAATAATTTAATGTTTTTTTTTAAAGTATAACTTTTGAATTACCAAGTTATTTTTTCTTTAATAAAATCGAATTTATTTAAAATCTATTTTTTTAAAAAAAAAAATTAAAGTTGACTTTTAAGTTTTAACTGATTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAACCTTCAACATATATATGGAAATAAAACAGTATTTAAACTCTTAAGGTATTTCAAATAAACTTAAAAAAAGACCTCCAAACTATATGAAATTTATGTTAAAAAACATTAATAAATAGTTCAATGGTAATTAATATAGATTTTTTTTTTTTTTTTTTAAAGTCAGAGATAGAGATAAAAAATAAAGGAATAGGTGGATTAGATATATAATGTATACATTAGTTCAACAACAAAATAAAAGGATAAAATATAACATTTTGAAATTTGGAGGCTAAATTAAAATTAAACTCAAAATTTTAAGAATTAAAAGTGTAACATTTTAAAATTTAAGAATCAAATAAAAATTAAACTAAAATTTAGGAACTAAAAAGATTTTTTCTATGTTTTTTTTTTTTTTGGTTCAGCTAGATGTAGAAATTTTTTGGTTGAGAATTTATTTTTGTTGAGCTACGTGTATATTAAATTATAAAAATAATTTGGTGGGTTGGTTTGGTTATTACAGGATTATAGCAAATGGGTATTATGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGACGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGTTGGACGATCTCGATGAAATAAGCTTACCCAATCGCATCCAATGAAGAAGATCATTAATTAATTAATTAAATATGCCTCCCAAACACAGCCTTACCACGTGGCCTATTGTACTTATTATTATTACATTCTCCTCCACCCAACTCTCTCTAAATTACCAACCCAACCCACTTCTTTTATATATTTTCCACCTTTTTATCTCTTTATGTTCCTTTTTATTAATTAGTTCTATATATTTGAGAGGAAAAAAAAAAAAAAATCCCATTTTACTTTTAATTTTTCTTTTTTCATGCAAATTTCTTCTCAATACTCAAGTTTAGTTTTAGATTTTTCTTTTTCCCTTCACTTCTCACTAAATAATATGGTACAATTTTGCCTCTTTCCCCTT CTTTCCTCTCTTCTTTTCAAATTAAACTGGCCATGGCTGCAGCCGATAGCCAGAACTTCAACCTCCCTCCCGGATTCCGATTCTATCCGACTGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCCGCCTTGTTGCCTTGCCACCCCGATGTCATTCCCGATCTCAACCTCTTCACCTACGATCCTTGGGAGCTAGAAGATGTGGAAGGAAAAGTTTGGTTGCTGATTCGTAGTGTTTTAGGGAAGGCGTTGGGAGAGGGAAACCGTTGGTATTTCTACAGCAGAAAAATTGATGTTCGAGTTACTGATAATGGGTATTGGAATCCATTGGGAAGAGATGACCCTGTTCTCTCCACCGCCACCTCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTTCACGTTCAAGACGCCGCCGCCGGACCTCTCAAAACTAACTGGATAATGCATGAGTATCGTCTTGCCGACACTGCCGCCTCTTCTTCTTCCTCCTCCAGACGCCGTGGACGTCCGAAAAGAGATTATAGCAAATGGGTATTATGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGACGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGTTGGACGATCTCGATGAAATAAGCTTACCCAATCGCATCCAATGAAGAAGATCATTAATTAATTAATTAAATATGCCTCCCAAACACAGCCTTACCACGTGGCCTATTGTACTTATTATTATTACATTCTCCTCCACCCAACTCTCTCTAAATTACCAACCCAACCCACTTCTTTTATATATTTTCCACCTTTTTATCTCTTTATGTTCCTTTTTATTAATTAGTTCTATATATTTGAGAGGAAAAAAAAAAAAAAATCCCATTTTACTTTTAATTTTTCTTTTTTCATGCAAATTTCTTCTCAATACTCAAGTTTAGTTTTAGATTTTTCTTTTTCCCTTCACTTCTCACTAAATAATATGGTACAATTTTGCCTCTTTCCCCTT ATGGCTGCAGCCGATAGCCAGAACTTCAACCTCCCTCCCGGATTCCGATTCTATCCGACTGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCCGCCTTGTTGCCTTGCCACCCCGATGTCATTCCCGATCTCAACCTCTTCACCTACGATCCTTGGGAGCTAGAAGATGTGGAAGGAAAAGTTTGGTTGCTGATTCGTAGTGTTTTAGGGAAGGCGTTGGGAGAGGGAAACCGTTGGTATTTCTACAGCAGAAAAATTGATGTTCGAGTTACTGATAATGGGTATTGGAATCCATTGGGAAGAGATGACCCTGTTCTCTCCACCGCCACCTCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTTCACGTTCAAGACGCCGCCGCCGGACCTCTCAAAACTAACTGGATAATGCATGAGTATCGTCTTGCCGACACTGCCGCCTCTTCTTCTTCCTCCTCCAGACGCCGTGGACGTCCGAAAAGAGATTATAGCAAATGGGTATTATGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGACGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGTTGGACGATCTCGATGAAATAAGCTTACCCAATCGCATCCAATGA MAAADSQNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELEDVEGKVWLLIRSVLGKALGEGNRWYFYSRKIDVRVTDNGYWNPLGRDDPVLSTATSEVVGMKKYFLFHVQDAAAGPLKTNWIMHEYRLADTAASSSSSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEDGAELSCLDEVFLTLDDLDEISLPNRIQ Homology
BLAST of CaUC09G170990 vs. NCBI nr
Match: XP_038888469.1 (NAC domain-containing protein 104 [Benincasa hispida]) HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102 Identity = 190/216 (87.96%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of CaUC09G170990 vs. NCBI nr
Match: XP_011658766.1 (NAC domain-containing protein 104 [Cucumis sativus] >KGN43677.1 hypothetical protein Csa_017076 [Cucumis sativus]) HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102 Identity = 187/216 (86.57%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of CaUC09G170990 vs. NCBI nr
Match: XP_008455246.1 (PREDICTED: NAC domain-containing protein 104 [Cucumis melo]) HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101 Identity = 187/215 (86.98%), Postives = 194/215 (90.23%), Query Frame = 0
BLAST of CaUC09G170990 vs. NCBI nr
Match: KAG6571701.1 (NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.5 bits (929), Expect = 2.6e-96 Identity = 179/221 (81.00%), Postives = 188/221 (85.07%), Query Frame = 0
BLAST of CaUC09G170990 vs. NCBI nr
Match: XP_022963618.1 (NAC domain-containing protein 104-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95 Identity = 181/223 (81.17%), Postives = 188/223 (84.30%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy Swiss-Prot
Match: Q8GWK6 (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 4.0e-68 Identity = 124/205 (60.49%), Postives = 154/205 (75.12%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy Swiss-Prot
Match: A0SPJ8 (NAC transcription factor NAM-1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NAM-1 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29 Identity = 79/206 (38.35%), Postives = 109/206 (52.91%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy Swiss-Prot
Match: D2SMN4 (NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum OX=77009 GN=NAM-B1 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29 Identity = 79/206 (38.35%), Postives = 109/206 (52.91%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28 Identity = 79/203 (38.92%), Postives = 108/203 (53.20%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.8e-28 Identity = 80/206 (38.83%), Postives = 114/206 (55.34%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy TrEMBL
Match: A0A0A0K5V4 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 8.9e-103 Identity = 187/216 (86.57%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy TrEMBL
Match: A0A1S3C0L6 (NAC domain-containing protein 104 OS=Cucumis melo OX=3656 GN=LOC103495457 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 7.5e-102 Identity = 187/215 (86.98%), Postives = 194/215 (90.23%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy TrEMBL
Match: A0A6J1HIE6 (NAC domain-containing protein 104-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463897 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 6.2e-96 Identity = 181/223 (81.17%), Postives = 188/223 (84.30%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy TrEMBL
Match: A0A6J1HV08 (NAC domain-containing protein 104-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467069 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95 Identity = 180/223 (80.72%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of CaUC09G170990 vs. ExPASy TrEMBL
Match: A0A6J1HFQ5 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463897 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94 Identity = 181/224 (80.80%), Postives = 188/224 (83.93%), Query Frame = 0
BLAST of CaUC09G170990 vs. TAIR 10
Match: AT5G64530.1 (xylem NAC domain 1 ) HSP 1 Score: 259.2 bits (661), Expect = 2.8e-69 Identity = 124/205 (60.49%), Postives = 154/205 (75.12%), Query Frame = 0
BLAST of CaUC09G170990 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 ) HSP 1 Score: 126.3 bits (316), Expect = 2.9e-29 Identity = 72/198 (36.36%), Postives = 104/198 (52.53%), Query Frame = 0
BLAST of CaUC09G170990 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 122.9 bits (307), Expect = 3.2e-28 Identity = 71/179 (39.66%), Postives = 96/179 (53.63%), Query Frame = 0
BLAST of CaUC09G170990 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 ) HSP 1 Score: 121.3 bits (303), Expect = 9.3e-28 Identity = 73/184 (39.67%), Postives = 98/184 (53.26%), Query Frame = 0
BLAST of CaUC09G170990 vs. TAIR 10
Match: AT4G27410.3 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27 Identity = 78/197 (39.59%), Postives = 103/197 (52.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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