CcUC03G058780 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G058780
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr03: 30648914 .. 30652738 (-)
RNA-Seq ExpressionCcUC03G058780
SyntenyCcUC03G058780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGAGATCGTCAAGAATCTCACCCATTCGATCTCAAGGTCTAAGAATTCGATGGATCCGAGCAACGACAATGCCAAGAAGAAGAAGAGAGGCTCTTCCGACGAAGCTCGAGACGACGGAGACGGCTCTAAGAGACTTTGCCCCTCTTTTCCAACTAGGTTTGATTTCTTTTTTACTTTTCATCTCTCCTTCTTTACGTATAACTTTATATTTGCTTGTTTTTTCCTTTGATCTTTTCACCGTTCCAAGTTCCATTAGTTCCCTTTTTCCTTAACCCTTTTTTTTTTTTTTTTTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGAATATTAAAAAAAAAAAAAAAAAACTATATATTCTTGCTTCATTTCATCTTCATTAGATCAAGTGTTGAGTTTTATGTCTTAAATCTGTTATCTGGCACTTTGAATGATTATGTATGGGATCGATGCAATTGTTATTAAGTTTTCATTTTAGACTTTATTTTGGGTCTATTTTGTTTAGGGTTAGGAAGGGGGTGTTGTGTATAAATTACCCTCTAACTCGTATCTACCTATATCTATGTCTTTTGTACCGTGTTGATTCTTAAGATAATAAAACAGTCCCATCTTATCAATGGATGTAACTAACACTTGGTTGTGTATCATGTAAATCTGTGTATTAATTTTCTTGTCTTGATTTTTTTGTGCTTGTCAATTGTTTCTGTTATAACCTATGGTGTTATAAATCATCTCTTTTTGGTCCTGGAGTGTGACGAGGGTGTTAGAGGGGTGTCAACCTAGTTGAGATGTCTTGGTGTACTTACTGATCCCTCCTGTCTTGTGAATATTTTTTTAAAAAAACCATCTCTTTTTTGTAATTATGATGTTTCAACTATAGTTCTAAACTGAAAACTCTTTTTGCAACCCCTTCGCCCATTTTGATTTCATTGTATATGAGCTTCCCTCTAGCTCTTTGTATATATTTTTTATGAATGAAATCTATATCGGCTCGAGGGCATGATGATGGTGCTATGGAAGTGTCAACCTAGTTGGGATGTCCTGGTGCACCCCCTAATCTCTTCTCTCTCAGTATTTTGTTCAACCTTGTTCGATCTCTTGTTGAATTGGTGACTCACCTGCAACATAAGTTTTTCATACCTGGGTTCATGTCATGATTTTGACTCCAAAAAATTGACTAGAATTGGTTGGGTGGGTATCCCAAAGTGAAGAAGTATTACTAATTTCTTGATTTTGTATGGGAAAATAGGAAAATTTTCATACGTAATTCATCTACAAAGATAGGACATTAATGATGAACTAAATCAAGTGGCCAGTTACAAACAATACAAATACAAACAATAATGAAGAAAGGAAAACGATTCTATTTTTTCATTATTAATAATATAGGGTTATATGGAATCGAATCGTAGACCTTCTTGATAAAACAGATCAAACTTATTATTATCAAAATGATTTGAACTGTTTCAAAGACCCAACATGCATTTTTTGCATTGGGCTCTTTCATTAACTGCTAATTATTTCTGTTATAACAAATTGATCAAATATTATTCAAGTGCTTAAATTGGCATGCTTTCAATTAATGTAGCCTCTAATTGCACTTCTCAATCAAAGTCCTTTGATTATTATAGCTATTCTGTTTAATTGGTATATGCATTTTTTTTTTTTTTTTTCATTATCTATATGTTCCTCACACACATTTAATGAAGAGCTTGGTATCTTTGTCGAAAAAAATAAACAGCAAACATGAGATGGGAAAAGAAGTAACTACTGCATCTGGGTCTGGATCATTGAAATTTAAATTATGTTTTTGCAATCCCATTGCCTCCCACATTTTCACCAACAACGAGATAAAATCTGAAAATGGGGAGCCATTGGGAGTTGTAATTTGTGATGCCACCAACTCCAACACTGTCATCTCGACCGGTCGTTTGTCGTCCGCCCTAGTTGAGTTCTTCCTCCTCCCTGGAGGGTTCAATTCTGGCAAACGACGAGATAACGAAATACCTTGGACGTCGAGTGATTTCGACAAAAGCATCTTGACTCCAAGAGAATGGAGAAGACCTTTGATCATTGGTAATGATCTCCAACTTTGCCTACAAAATGGAGTTGGCTTTGTCAACAATCTGATTGTCACTGACAACTCAAGTTGGATGAAATCAAAGATGTTTTGTTTGGGAGTCAAAATTAAAGAGAACAAGTTTTTAGTCGAGTTTGGTAGGATTGGAGAAGCTGTTTCCGAACCTTTTAGGGTCATGGATCACCGAGGGGAAGGTATAATTAATTCTCCCTTTTCTCTCTTTTGATAAACTTAATAACATTTTAAATACATAATTTCCTTCATTTTATAATATTAATTAGGGAATAAAAAACATCACCCTCCAAGTATGGAAGATGAAGTATGGCGACTCGAAGGCATAGCTAAAGATGGTACATATCACAAAAACTTATCTTCCAAAGGCATAATGAATGTGGGTGATTTCTTGGATGCATATCGTCGGATGGGTCCTACGTCTTTGAGAATGGTATCTTAATTTATTTTAAGAACAATACTTGAGTACATCCTGAAGTTGCACCTATCTTTTTTAGCCACCAACAACAAAACATAAGAATTTGGTGAGCTATATTAACATGATGAGTGTAACCTAGAATGCACACAAGGTTTGTTTCTATTTTAAATGATTAGAAGTCAATTCATTAAATTTGAAGTTTTATGTTCATATATACATGTGTAGATTCTTGGAAAGAGAGTGTTAGACAAGACATGGAACATTATGGTTAAGAATGCTAAGGAATGTGTGGTTGATGTTCCAGTTAATAATGATCAAACTCTTCAGGTTTAATATCTCTCTCTCTCTCTCTAGCTATTCAAATGAAAGCTTAAACCTAGTTAATATATGCCAAAAACAGGTCAGTCATTTTGTAGAAACTGGGGTGGAAGCTAATTCCAACAAGAATTTAGAAGTTGATGAGCAAAGCTTTGAGGTTACTGTTCTTTCTCTCTCTCTTTCTCTCTACTCAAATTATGAAAGCTTACTTCCTTTATATCTTGTTAAAAAAAATAAAAATAAATAAAAAAAAAACTTAAACTTACTGTTGGAATGTCATAAATCTATTATCTAGCTCCTAAAACCTAAGTTCAATTCATAGTTGGCATATTTATATTATTTAGGGATATTTACAATTTTGACCCTAGGATTTAGAGAAGTGCATTTTATAAACTCTCTAACCCTTGGTGGTGTCATTATTTTACATTATTCTCTCTCTAATAAAATTGTTCTTCCTCTGCTCGTAGTTATAACTAGCATATTGTTAGTAAATCATGTAAATCTGTGTGTCGATTATCTATTCTTTTACGTTTTCTATATATATATTTGTCGATTTTATAACAATTATATGACAAAAATATAGCGCAATAATTTGGTGGAAACCGAGGCGAAAGCTAATCCCAACCAAAATTTTGAAGTTCACGACCAAAATCAAAGCTTTGAGGTTACTTCTCTCTCTTTCTTTCTCTCAATTGAAATGATCTTAAACCATGCTGATATCATATGCAACAAGGAAATAATTTTGAGGAAAACGAGGTTCAAGCTAATTGCAAGAACAATTTTGAAATTGATGAACAAAATCAAAACTTTGAGTTAATGGATTATTCTCTATTTATATAAAACAGGCAAATGTTTTGGTGGAAAATGAAATGGAAGCTAATTCCAACGAGAATTTTGAGGGTGATGAGCAAAAAAAGTATG

mRNA sequence

CTTGAGATCGTCAAGAATCTCACCCATTCGATCTCAAGGTCTAAGAATTCGATGGATCCGAGCAACGACAATGCCAAGAAGAAGAAGAGAGGCTCTTCCGACGAAGCTCGAGACGACGGAGACGGCTCTAAGAGACTTTGCCCCTCTTTTCCAACTAGGCAAATGTTTTGGTGGAAAATGAAATGGAAGCTAATTCCAACGAGAATTTTGAGGGTGATGAGCAAAAAAAGTATG

Coding sequence (CDS)

CTTGAGATCGTCAAGAATCTCACCCATTCGATCTCAAGGTCTAAGAATTCGATGGATCCGAGCAACGACAATGCCAAGAAGAAGAAGAGAGGCTCTTCCGACGAAGCTCGAGACGACGGAGACGGCTCTAAGAGACTTTGCCCCTCTTTTCCAACTAGGCAAATGTTTTGGTGGAAAATGAAATGGAAGCTAATTCCAACGAGAATTTTGAGGGTGATGAGCAAAAAAAGTATG

Protein sequence

LEIVKNLTHSISRSKNSMDPSNDNAKKKKRGSSDEARDDGDGSKRLCPSFPTRQMFWWKMKWKLIPTRILRVMSKKSM
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..44

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G058780.1CcUC03G058780.1mRNA