Clc10G13420 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G13420
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	polygalacturonase QRT3-like
Location	ClcChr10: 27056927 .. 27058862 (+)
RNA-Seq Expression	Clc10G13420
Synteny	Clc10G13420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGCAATTTCCAATCTAATATTTGACCACTCGGAAATTGAGACCAGCCGCCCACAGCAGATTATTGCCCGTACCCTCCTCCATCTCAAGTTAATTCAAGCATATATGTATCTTCGTAAATATACATCTTCTAGTTCTAATTCATCTCATTTCAGTGCCATTTAATTAATAAGTGAGATATGAATCTCAGAAACTATGCTTATACTTTTAGGCCCTTCCCAGGCTTTGTTTATGCAATTATTATCAGCGCATTTATCATTGTGAGTGAGAGCTCATATTCCACTTCTTATGAAGATCATCACTTCATGAGACGCCTTGACAACTATCAATACAATAGCCTCTCTTCTGCAGCTCCTACTCAACCTCATCTCACGGTAACTCTCTCTCTCTTTCTATTGACACGAAATTAGAGTTGGCATTGATTGGATTGGAATTGTCTAACCATATGATGAACAAATGATGAAGGCAACATCGGGATCACGTGTTTATCATGTGGTTGCCTATGGAGCCGATCCCACTGGGGAATCTGACAGCACCGAGGCAATAGAGAAAGCCATCTCTGATGCATTTCAGTATCCCACGAATGGTCATTTGATGAAAGGCATTTTAGACCTTGGAGGTTCTCAACTTCACCTAGATGGAGGGACTTACAAGATCAGTCGGCCCTTACGCTTACCAGACATAGCTGCTGGCAATTTTATGGTACCTATTATATAATACTACTCTCCCTGTTGAGGATCCCACATTATAAAGAATAAAGATGAGGAAACCTCACAATCTTTATAAGATACATGAATTACTCTTCTCATTGTCGATTGGTTTTAAGATAGAGCTTATGTTTATCTAATATCTACTATCTTATCTTGGATCGGATGCAATATGATAAAAATGCATTTACACATGTGGACAGATACATGGAGGATCATTACGCGCATCAGAATCTTTTCCAAGCAATAGCCATCTTATTGAATTAAGGCCGTCATCACCTTCTGTAATGTATGAATATATCACACTGAAGGACCTAATGTTAAACTGCAATTTCAGAGGAGGTGGGATAGCCATTATCAACTCATTGAGAACTACAGTAGATAACTGTTACATATCACACTTCACGAGCGAGGGGATCGTAATTGAAGGTGGGCATGAAAGTTACATACGAAACTCCTTCATCGGGCAACACATCAATGTCGGTGGAGACCGAGGCGAAAAGGACTTCTCGGGGATTGGAGTGAAAATAATGGGAAACGACAATTTGTTGAGGGACATAGTGATATATTCAGCAGAGATTGGAGTGATGGTGTTGGGACAAGCAAATGTGATAATGGGAGTGCATTGTTACAACAAGGCGAGGGGATTGGGTGGAATAGGAATTTATGTGAAGGAACCTGGTTTTACACAAACAAGGATAGTAAATTGCTACTTGGATTACACAGGAGTGGTGGTGGAGGATCCAGTTCAAGTGCATATAACAGGATGCTTCTTCTTAGGGAATGCAGTGGTTGTATTGAAATCAATAGGGGGAGTAATAAGTGGATTAAATATCGTCGATAACATGTTCTCCGGAGATTATACAGGAGTGAAAATAGTTGAGTTGGATGAATCCAAAACTCCCTTCACTAGAATTGATCAAGTGGTGGTGGATAGAAATAATGTCCGTGGGATGGTGGTTAAGACGACGGTGGGAAGAGGATCCACGAGGGCAAATGGAACAACTTGGACAGTTGATTTCTCAAGCCTATTGTTATTCCCTAACCTCATAAAAAATGTAGTGTACTCATTGGAGATGGAGCAGAGTCAGGGTCAAGGTCAGATTCAGGTATTTCCAAATCATGTGTTAACTAATCTAAAGCACAACCGAGTAACTGTCCAGTCCAATGTGCCAGCAGCAGCTACACTACATGTTCAAGTACACCAAACAACCTATGCCTTATGA

mRNA sequence

ATGACTGCAATTTCCAATCTAATATTTGACCACTCGGAAATTGAGACCAGCCGCCCACAGCAGATTATTGCCCGTACCCTCCTCCATCTCAAGTTAATTCAAGCATATATGCCCTTCCCAGGCTTTGTTTATGCAATTATTATCAGCGCATTTATCATTGTGAGTGAGAGCTCATATTCCACTTCTTATGAAGATCATCACTTCATGAGACGCCTTGACAACTATCAATACAATAGCCTCTCTTCTGCAGCTCCTACTCAACCTCATCTCACGGCAACATCGGGATCACGTGTTTATCATGTGGTTGCCTATGGAGCCGATCCCACTGGGGAATCTGACAGCACCGAGGCAATAGAGAAAGCCATCTCTGATGCATTTCAGTATCCCACGAATGGTCATTTGATGAAAGGCATTTTAGACCTTGGAGGTTCTCAACTTCACCTAGATGGAGGGACTTACAAGATCAGTCGGCCCTTACGCTTACCAGACATAGCTGCTGGCAATTTTATGATACATGGAGGATCATTACGCGCATCAGAATCTTTTCCAAGCAATAGCCATCTTATTGAATTAAGGCCGTCATCACCTTCTGTAATGTATGAATATATCACACTGAAGGACCTAATGTTAAACTGCAATTTCAGAGGAGGTGGGATAGCCATTATCAACTCATTGAGAACTACAGTAGATAACTGTTACATATCACACTTCACGAGCGAGGGGATCGTAATTGAAGGTGGGCATGAAAGTTACATACGAAACTCCTTCATCGGGCAACACATCAATGTCGGTGGAGACCGAGGCGAAAAGGACTTCTCGGGGATTGGAGTGAAAATAATGGGAAACGACAATTTGTTGAGGGACATAGTGATATATTCAGCAGAGATTGGAGTGATGGTGTTGGGACAAGCAAATGTGATAATGGGAGTGCATTGTTACAACAAGGCGAGGGGATTGGGTGGAATAGGAATTTATGTGAAGGAACCTGGTTTTACACAAACAAGGATAGTAAATTGCTACTTGGATTACACAGGAGTGGTGGTGGAGGATCCAGTTCAAGTGCATATAACAGGATGCTTCTTCTTAGGGAATGCAGTGGTTGTATTGAAATCAATAGGGGGAGTAATAAGTGGATTAAATATCGTCGATAACATGTTCTCCGGAGATTATACAGGAGTGAAAATAGTTGAGTTGGATGAATCCAAAACTCCCTTCACTAGAATTGATCAAGTGGTGGTGGATAGAAATAATGTCCGTGGGATGGTGGTTAAGACGACGGTGGGAAGAGGATCCACGAGGGCAAATGGAACAACTTGGACAGTTGATTTCTCAAGCCTATTGTTATTCCCTAACCTCATAAAAAATGTAGTGTACTCATTGGAGATGGAGCAGAGTCAGGGTCAAGGTCAGATTCAGGTATTTCCAAATCATGTGTTAACTAATCTAAAGCACAACCGAGTAACTGTCCAGTCCAATGTGCCAGCAGCAGCTACACTACATGTTCAAGTACACCAAACAACCTATGCCTTATGA

Coding sequence (CDS)

ATGACTGCAATTTCCAATCTAATATTTGACCACTCGGAAATTGAGACCAGCCGCCCACAGCAGATTATTGCCCGTACCCTCCTCCATCTCAAGTTAATTCAAGCATATATGCCCTTCCCAGGCTTTGTTTATGCAATTATTATCAGCGCATTTATCATTGTGAGTGAGAGCTCATATTCCACTTCTTATGAAGATCATCACTTCATGAGACGCCTTGACAACTATCAATACAATAGCCTCTCTTCTGCAGCTCCTACTCAACCTCATCTCACGGCAACATCGGGATCACGTGTTTATCATGTGGTTGCCTATGGAGCCGATCCCACTGGGGAATCTGACAGCACCGAGGCAATAGAGAAAGCCATCTCTGATGCATTTCAGTATCCCACGAATGGTCATTTGATGAAAGGCATTTTAGACCTTGGAGGTTCTCAACTTCACCTAGATGGAGGGACTTACAAGATCAGTCGGCCCTTACGCTTACCAGACATAGCTGCTGGCAATTTTATGATACATGGAGGATCATTACGCGCATCAGAATCTTTTCCAAGCAATAGCCATCTTATTGAATTAAGGCCGTCATCACCTTCTGTAATGTATGAATATATCACACTGAAGGACCTAATGTTAAACTGCAATTTCAGAGGAGGTGGGATAGCCATTATCAACTCATTGAGAACTACAGTAGATAACTGTTACATATCACACTTCACGAGCGAGGGGATCGTAATTGAAGGTGGGCATGAAAGTTACATACGAAACTCCTTCATCGGGCAACACATCAATGTCGGTGGAGACCGAGGCGAAAAGGACTTCTCGGGGATTGGAGTGAAAATAATGGGAAACGACAATTTGTTGAGGGACATAGTGATATATTCAGCAGAGATTGGAGTGATGGTGTTGGGACAAGCAAATGTGATAATGGGAGTGCATTGTTACAACAAGGCGAGGGGATTGGGTGGAATAGGAATTTATGTGAAGGAACCTGGTTTTACACAAACAAGGATAGTAAATTGCTACTTGGATTACACAGGAGTGGTGGTGGAGGATCCAGTTCAAGTGCATATAACAGGATGCTTCTTCTTAGGGAATGCAGTGGTTGTATTGAAATCAATAGGGGGAGTAATAAGTGGATTAAATATCGTCGATAACATGTTCTCCGGAGATTATACAGGAGTGAAAATAGTTGAGTTGGATGAATCCAAAACTCCCTTCACTAGAATTGATCAAGTGGTGGTGGATAGAAATAATGTCCGTGGGATGGTGGTTAAGACGACGGTGGGAAGAGGATCCACGAGGGCAAATGGAACAACTTGGACAGTTGATTTCTCAAGCCTATTGTTATTCCCTAACCTCATAAAAAATGTAGTGTACTCATTGGAGATGGAGCAGAGTCAGGGTCAAGGTCAGATTCAGGTATTTCCAAATCATGTGTTAACTAATCTAAAGCACAACCGAGTAACTGTCCAGTCCAATGTGCCAGCAGCAGCTACACTACATGTTCAAGTACACCAAACAACCTATGCCTTATGA

Protein sequence

MTAISNLIFDHSEIETSRPQQIIARTLLHLKLIQAYMPFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLDNYQYNSLSSAAPTQPHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLHLDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFSGDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLEMEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQTTYAL

Homology

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BLAST of Clc10G13420 vs. NCBI nr
Match: XP_008443524.2 (PREDICTED: polygalacturonase QRT3-like [Cucumis melo] >KAA0053667.1 polygalacturonase QRT3-like [Cucumis melo var. makuwa] >TYK00836.1 polygalacturonase QRT3-like [Cucumis melo var. makuwa])

HSP 1 Score: 879.4 bits (2271), Expect = 1.5e-251
Identity = 438/469 (93.39%), Postives = 456/469 (97.23%), Query Frame = 0


Query: 42  FVYAIIISAFIIVSESSYSTSYEDHHFMRRLDNYQYNSLSSAAPTQPHLTATSGSRVYHV 101
           FV+AIIIS F+ VSESSYSTSYEDHHFMRR+DNY+YN+LSSAAP++P LTA SGSRVYHV
Sbjct: 18  FVHAIIISTFVTVSESSYSTSYEDHHFMRRVDNYRYNTLSSAAPSRPPLTAMSGSRVYHV 77

Query: 102 VAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLHLDGGTYKISRPLRL 161
           VAYGADPTGESDSTEAIEKAISDAF+YPT+GHLMKGILDLGGSQLHLDGGTYKISRPLRL
Sbjct: 78  VAYGADPTGESDSTEAIEKAISDAFEYPTDGHLMKGILDLGGSQLHLDGGTYKISRPLRL 137

Query: 162 PDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI 221
           PD +AGNFMIHGGSLRASESFPSN HLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI
Sbjct: 138 PDTSAGNFMIHGGSLRASESFPSNGHLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI 197

Query: 222 INSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG 281
           INSLRTTVDNCY+SHF SEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG
Sbjct: 198 INSLRTTVDNCYVSHFRSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG 257

Query: 282 NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTRIVNCYL 341
           NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKAR LGG+GIYVKEPGFTQTRIVNCYL
Sbjct: 258 NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARALGGVGIYVKEPGFTQTRIVNCYL 317

Query: 342 DYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFSGDYTGVKIVELDES 401
           DYTGVV EDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFSGDYTGV+IVELDES
Sbjct: 318 DYTGVVAEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFSGDYTGVRIVELDES 377

Query: 402 KTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE 461
           KTPFTRIDQVVVDRNNVRGMVVK+TVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE
Sbjct: 378 KTPFTRIDQVVVDRNNVRGMVVKSTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE 437

Query: 462 MEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQTTYAL 511
           MEQS+GQGQIQV PNHVLTNL HNRVTV+SN+  AATLHVQVHQTTYAL
Sbjct: 438 MEQSEGQGQIQVLPNHVLTNLTHNRVTVRSNLAIAATLHVQVHQTTYAL 486

[Close]

BLAST of Clc10G13420 vs. NCBI nr
Match: XP_004141189.2 (polygalacturonase QRT3 [Cucumis sativus] >KGN59673.1 hypothetical protein Csa_001831 [Cucumis sativus])

HSP 1 Score: 864.8 bits (2233), Expect = 3.8e-247
Identity = 438/475 (92.21%), Postives = 453/475 (95.37%), Query Frame = 0


Query: 36  YMPFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLDNYQYNSLSSAAPTQPHLTATSG 95
           + PF GFVYAIII+AF+ VSESSYSTSYEDHHFMRR+DNY+YNSLSSA P+    TA SG
Sbjct: 10  FRPFLGFVYAIIITAFVTVSESSYSTSYEDHHFMRRVDNYRYNSLSSAPPS----TAMSG 69

Query: 96  SRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLHLDGGTYKI 155
           SRVYHVVAYGADPTGESDSTEAIEKAI DAF+YPT+GHLMKGILDLGGSQLHLDGGTYKI
Sbjct: 70  SRVYHVVAYGADPTGESDSTEAIEKAIFDAFEYPTDGHLMKGILDLGGSQLHLDGGTYKI 129

Query: 156 SRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKDLMLNCNFR 215
           SRPLRLPDI AGNFMIHGGSLRASESFPSN HLIELRPSSP+VMYEYITLKDLMLNCNFR
Sbjct: 130 SRPLRLPDIPAGNFMIHGGSLRASESFPSNGHLIELRPSSPAVMYEYITLKDLMLNCNFR 189

Query: 216 GGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGI 275
           GGGIAIINSLRTTVDNCYISHF SEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGI
Sbjct: 190 GGGIAIINSLRTTVDNCYISHFMSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGI 249

Query: 276 GVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTR 335
           GVKIMGNDNLLRDIVIYSAEIGVMVLGQANV+MGVHCYNKAR LGGIGIYVKEPGFTQTR
Sbjct: 250 GVKIMGNDNLLRDIVIYSAEIGVMVLGQANVMMGVHCYNKARALGGIGIYVKEPGFTQTR 309

Query: 336 IVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFSGDYTGVKI 395
           IVNCYLDYTGVVVEDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFSGDYTGV+I
Sbjct: 310 IVNCYLDYTGVVVEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFSGDYTGVRI 369

Query: 396 VELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLLLFPNLIKN 455
           VELDES TPFTRIDQVVVDRNNVRGMVVK+TVGRGSTRANGTTWTVDFSSLLLFPNLIKN
Sbjct: 370 VELDESMTPFTRIDQVVVDRNNVRGMVVKSTVGRGSTRANGTTWTVDFSSLLLFPNLIKN 429

Query: 456 VVYSLEMEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQTTYAL 511
           VVYSLEMEQSQG    QVFPNHVLTNL HNRVTV+SN+  AATLHVQVHQTTYAL
Sbjct: 430 VVYSLEMEQSQG----QVFPNHVLTNLTHNRVTVRSNLAIAATLHVQVHQTTYAL 476

[Close]

BLAST of Clc10G13420 vs. NCBI nr
Match: XP_038905582.1 (polygalacturonase QRT3-like [Benincasa hispida])

HSP 1 Score: 862.4 bits (2227), Expect = 1.9e-246
Identity = 436/476 (91.60%), Postives = 454/476 (95.38%), Query Frame = 0


Query: 36  YMPFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLDNYQYNSLSSAAPTQPHLTATSG 95
           + PF GFVYAIIISA +IVSESSYSTSYEDHH MRR+DNY Y SLSS AP++ HLT TSG
Sbjct: 10  FRPFLGFVYAIIISALVIVSESSYSTSYEDHHLMRRIDNYPY-SLSSVAPSRSHLTETSG 69

Query: 96  SRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLHLDGGTYKI 155
           SRVYHVVAYGADPTGESDSTEAIEKAISDAF Y T+GHLMKGILDLGGSQLHLDGGTYKI
Sbjct: 70  SRVYHVVAYGADPTGESDSTEAIEKAISDAFSYATDGHLMKGILDLGGSQLHLDGGTYKI 129

Query: 156 SRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKDLMLNCNFR 215
           SRPLRLPD+AAGNFMIHGGSLRASESFPS+ HLIELRPSSPSVMYEYITLKDLMLNCNFR
Sbjct: 130 SRPLRLPDVAAGNFMIHGGSLRASESFPSDGHLIELRPSSPSVMYEYITLKDLMLNCNFR 189

Query: 216 GGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGI 275
           GGGIAIINSLRTTVDNCYISH TSEGIVIEGGHESYIRNSFIGQHINVGGD  EKDFSGI
Sbjct: 190 GGGIAIINSLRTTVDNCYISHLTSEGIVIEGGHESYIRNSFIGQHINVGGDGYEKDFSGI 249

Query: 276 GVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTR 335
           GVK+MGNDN+LRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGG+GIYVK+PGFTQTR
Sbjct: 250 GVKVMGNDNVLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGVGIYVKQPGFTQTR 309

Query: 336 IVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFSGDYTGVKI 395
           IVNCYLDYTG+VVEDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMF+GDYTGVKI
Sbjct: 310 IVNCYLDYTGIVVEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFAGDYTGVKI 369

Query: 396 VELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTR-ANGTTWTVDFSSLLLFPNLIK 455
           VELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTR  NGTTWTVDFSSLLLFPNLI+
Sbjct: 370 VELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRVTNGTTWTVDFSSLLLFPNLIR 429

Query: 456 NVVYSLEMEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQTTYAL 511
           NVVYSLEMEQS+GQG  QVFPNHVLTNL HNRVTV+SNV  AATLHVQVHQTTYAL
Sbjct: 430 NVVYSLEMEQSEGQG--QVFPNHVLTNLAHNRVTVRSNVAVAATLHVQVHQTTYAL 482

[Close]

BLAST of Clc10G13420 vs. NCBI nr
Match: XP_022983336.1 (polygalacturonase QRT3-like [Cucurbita maxima])

HSP 1 Score: 844.0 bits (2179), Expect = 7.0e-241
Identity = 429/485 (88.45%), Postives = 452/485 (93.20%), Query Frame = 0


Query: 38  PFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLD-----NYQYNSLSSAA-----PTQ 97
           PF  FVYA+ IS F+IVSESSYSTSYED HFMRRLD     NYQY+ LSSA+     P+Q
Sbjct: 12  PFIAFVYAVTISEFVIVSESSYSTSYED-HFMRRLDPSRLHNYQYDGLSSASPSHTYPSQ 71

Query: 98  PHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLH 157
            HLT  SGSRVYHVV+YGADPTGE+DSTEAIEKAISDAF+YPT+ HLMKGILDLGGSQ+H
Sbjct: 72  SHLTPISGSRVYHVVSYGADPTGETDSTEAIEKAISDAFRYPTDAHLMKGILDLGGSQIH 131

Query: 158 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKD 217
           LDGGTYKISRPLRLPDIAAGNFMIHGGSLRAS+SFPS+ HLIELRPSSPSVMYEYITLKD
Sbjct: 132 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASDSFPSDGHLIELRPSSPSVMYEYITLKD 191

Query: 218 LMLNCNFRGGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDR 277
           LMLNCNFRGGGIAI+NS+RTTVDNCYISHF SEGIVIEGGHESYIRNSFIGQHIN+GGDR
Sbjct: 192 LMLNCNFRGGGIAIVNSVRTTVDNCYISHFMSEGIVIEGGHESYIRNSFIGQHINMGGDR 251

Query: 278 GEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVK 337
           GEKDFSGIGVK+MGNDN+LRDIVIYSAEIGVM+LGQANV+MGVHCYNKARGLGGIGIYV 
Sbjct: 252 GEKDFSGIGVKMMGNDNVLRDIVIYSAEIGVMLLGQANVLMGVHCYNKARGLGGIGIYVG 311

Query: 338 EPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFS 397
            PGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFS
Sbjct: 312 SPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFS 371

Query: 398 GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL 457
           GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWT DFSSLL
Sbjct: 372 GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTFDFSSLL 431

Query: 458 LFPNLIKNVVYSLEMEQS--QGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQ 511
           LF NLIKNV YSLEMEQ+  QGQGQ+QVFPNH LTN+ HNRVTVQSNV  AATLHVQVHQ
Sbjct: 432 LFRNLIKNVGYSLEMEQTQGQGQGQVQVFPNHALTNVSHNRVTVQSNVAVAATLHVQVHQ 491

[Close]

BLAST of Clc10G13420 vs. NCBI nr
Match: XP_022934866.1 (polygalacturonase QRT3-like [Cucurbita moschata])

HSP 1 Score: 841.3 bits (2172), Expect = 4.5e-240
Identity = 430/486 (88.48%), Postives = 450/486 (92.59%), Query Frame = 0


Query: 38  PFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLD-----NYQYNSLSSAA-----PTQ 97
           PF  FVYA+ IS F+IVSESSYSTSYED  FMRRLD     NYQYN LSSA+     P+Q
Sbjct: 12  PFIAFVYAVTISEFVIVSESSYSTSYED-RFMRRLDPSRLHNYQYNGLSSASPSHTYPSQ 71

Query: 98  PHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLH 157
            HLT  SGSRVYHVVAYGADPTGESDSTEAIEKAISDAF+YPT+ HLMKGILDLGGSQ+H
Sbjct: 72  SHLTPLSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFRYPTDAHLMKGILDLGGSQIH 131

Query: 158 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKD 217
           LDGGTYKISRPLRLPDIAAGNFMIHGGSLRAS+SFPS+ HLIELR SSPSVMYEYITLKD
Sbjct: 132 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASDSFPSDGHLIELRSSSPSVMYEYITLKD 191

Query: 218 LMLNCNFRGGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDR 277
           LMLNCNFRGGGIAI+NSLRTTVDNCYISHF SEGIVIEGGHESYIRNSFIGQHIN+GGDR
Sbjct: 192 LMLNCNFRGGGIAIVNSLRTTVDNCYISHFMSEGIVIEGGHESYIRNSFIGQHINMGGDR 251

Query: 278 GEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVK 337
           GEKDFSGIGVK++GNDN+LRDIVIYSAEIGVMVLGQANV+MGVHCYNKARGLGGIGIYV 
Sbjct: 252 GEKDFSGIGVKMIGNDNVLRDIVIYSAEIGVMVLGQANVLMGVHCYNKARGLGGIGIYVG 311

Query: 338 EPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFS 397
            PGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFS
Sbjct: 312 SPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFS 371

Query: 398 GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL 457
           GDYTGV+IVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL
Sbjct: 372 GDYTGVRIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL 431

Query: 458 LFPNLIKNVVYSLEMEQS----QGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQV 510
           LF NLIKNV YSLEMEQ+    QGQGQ+QVFPNH LTN+ HNRVTVQSNV  AATLHVQV
Sbjct: 432 LFRNLIKNVGYSLEMEQTQGQGQGQGQVQVFPNHALTNVSHNRVTVQSNVAVAATLHVQV 491

[Close]

BLAST of Clc10G13420 vs. ExPASy Swiss-Prot
Match: O49432 (Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 2.7e-139
Identity = 259/487 (53.18%), Postives = 339/487 (69.61%), Query Frame = 0


Query: 28  LHLKLIQAYMPFPGFVYAIIISAFIIVSESSYSTSYEDHHFMR------RLDNYQYNSLS 87
           + L+  Q  MP    + ++++S  +   + S S S  D            L      +L 
Sbjct: 1   MELRKSQVAMPVFLAIMSLMVSQVVFAEKDSGSMSPHDRALAEMQALKASLVRRNLPALV 60

Query: 88  SAAPTQPHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDL 147
           S  PT P   A  G RVY V++YGADPTG+ DST+AI KA+ +AF  P +G LM+GI DL
Sbjct: 61  SPPPTPPQ--AVPGPRVYQVISYGADPTGKLDSTDAILKAMEEAFDGPNHGVLMQGINDL 120

Query: 148 GGSQLHLDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMY- 207
           GG+++ L GG+Y ISRPLR P   AGN +I GG+LRAS  FP + +LIEL+  S  + Y 
Sbjct: 121 GGARIDLQGGSYLISRPLRFPSAGAGNLLISGGTLRASNDFPVDRYLIELKDESSKLQYI 180

Query: 208 -EYITLKDLMLNCNFRGGGIAIINSLRTTVDNCYISHF-TSEGIVIEGGHESYIRNSFIG 267
            EYITL+DL+++CN+RGG IA+INSLRT++DNCYI+ F  + GI+++ GHE+YIRNSF+G
Sbjct: 181 FEYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLG 240

Query: 268 QHINVGGDRGEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARG 327
           QHI  GGDRGE+ FSG  + +MGNDN + D VI+SA IGVMV GQAN++ GVHCYNKA G
Sbjct: 241 QHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATG 300

Query: 328 LGGIGIYVKEPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISG 387
            GG GIY++ PG TQ RIVN YLDYTG+V EDPVQ+ I+G FFLG+A ++LKSI G I G
Sbjct: 301 FGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRG 360

Query: 388 LNIVDNMFSGDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTT 447
           ++IVDNMFSG   GV+IV+LD+  T F  + QVVVDRN+V GMV K+TV RGS   NGT+
Sbjct: 361 VSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTS 420

Query: 448 WTVDFSSLLLFPNLIKNVVYSLEMEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAAT 506
           WTVDF+ +LLFP+LI +V Y+L   ++       VFP H L N+  NRV V++N P   T
Sbjct: 421 WTVDFNPVLLFPDLINHVQYTLVASEA------GVFPLHALRNVSDNRVVVETNAPVTGT 479

[Close]

BLAST of Clc10G13420 vs. ExPASy TrEMBL
Match: A0A5D3BRF5 (Polygalacturonase QRT3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00390 PE=4 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 7.2e-252
Identity = 438/469 (93.39%), Postives = 456/469 (97.23%), Query Frame = 0


Query: 42  FVYAIIISAFIIVSESSYSTSYEDHHFMRRLDNYQYNSLSSAAPTQPHLTATSGSRVYHV 101
           FV+AIIIS F+ VSESSYSTSYEDHHFMRR+DNY+YN+LSSAAP++P LTA SGSRVYHV
Sbjct: 18  FVHAIIISTFVTVSESSYSTSYEDHHFMRRVDNYRYNTLSSAAPSRPPLTAMSGSRVYHV 77

Query: 102 VAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLHLDGGTYKISRPLRL 161
           VAYGADPTGESDSTEAIEKAISDAF+YPT+GHLMKGILDLGGSQLHLDGGTYKISRPLRL
Sbjct: 78  VAYGADPTGESDSTEAIEKAISDAFEYPTDGHLMKGILDLGGSQLHLDGGTYKISRPLRL 137

Query: 162 PDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI 221
           PD +AGNFMIHGGSLRASESFPSN HLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI
Sbjct: 138 PDTSAGNFMIHGGSLRASESFPSNGHLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI 197

Query: 222 INSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG 281
           INSLRTTVDNCY+SHF SEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG
Sbjct: 198 INSLRTTVDNCYVSHFRSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG 257

Query: 282 NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTRIVNCYL 341
           NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKAR LGG+GIYVKEPGFTQTRIVNCYL
Sbjct: 258 NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARALGGVGIYVKEPGFTQTRIVNCYL 317

Query: 342 DYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFSGDYTGVKIVELDES 401
           DYTGVV EDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFSGDYTGV+IVELDES
Sbjct: 318 DYTGVVAEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFSGDYTGVRIVELDES 377

Query: 402 KTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE 461
           KTPFTRIDQVVVDRNNVRGMVVK+TVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE
Sbjct: 378 KTPFTRIDQVVVDRNNVRGMVVKSTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE 437

Query: 462 MEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQTTYAL 511
           MEQS+GQGQIQV PNHVLTNL HNRVTV+SN+  AATLHVQVHQTTYAL
Sbjct: 438 MEQSEGQGQIQVLPNHVLTNLTHNRVTVRSNLAIAATLHVQVHQTTYAL 486

[Close]

BLAST of Clc10G13420 vs. ExPASy TrEMBL
Match: A0A1S3B7S6 (polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103487092 PE=4 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 7.2e-252
Identity = 438/469 (93.39%), Postives = 456/469 (97.23%), Query Frame = 0


Query: 42  FVYAIIISAFIIVSESSYSTSYEDHHFMRRLDNYQYNSLSSAAPTQPHLTATSGSRVYHV 101
           FV+AIIIS F+ VSESSYSTSYEDHHFMRR+DNY+YN+LSSAAP++P LTA SGSRVYHV
Sbjct: 18  FVHAIIISTFVTVSESSYSTSYEDHHFMRRVDNYRYNTLSSAAPSRPPLTAMSGSRVYHV 77

Query: 102 VAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLHLDGGTYKISRPLRL 161
           VAYGADPTGESDSTEAIEKAISDAF+YPT+GHLMKGILDLGGSQLHLDGGTYKISRPLRL
Sbjct: 78  VAYGADPTGESDSTEAIEKAISDAFEYPTDGHLMKGILDLGGSQLHLDGGTYKISRPLRL 137

Query: 162 PDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI 221
           PD +AGNFMIHGGSLRASESFPSN HLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI
Sbjct: 138 PDTSAGNFMIHGGSLRASESFPSNGHLIELRPSSPSVMYEYITLKDLMLNCNFRGGGIAI 197

Query: 222 INSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG 281
           INSLRTTVDNCY+SHF SEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG
Sbjct: 198 INSLRTTVDNCYVSHFRSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMG 257

Query: 282 NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTRIVNCYL 341
           NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKAR LGG+GIYVKEPGFTQTRIVNCYL
Sbjct: 258 NDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARALGGVGIYVKEPGFTQTRIVNCYL 317

Query: 342 DYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFSGDYTGVKIVELDES 401
           DYTGVV EDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFSGDYTGV+IVELDES
Sbjct: 318 DYTGVVAEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFSGDYTGVRIVELDES 377

Query: 402 KTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE 461
           KTPFTRIDQVVVDRNNVRGMVVK+TVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE
Sbjct: 378 KTPFTRIDQVVVDRNNVRGMVVKSTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLE 437

Query: 462 MEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQTTYAL 511
           MEQS+GQGQIQV PNHVLTNL HNRVTV+SN+  AATLHVQVHQTTYAL
Sbjct: 438 MEQSEGQGQIQVLPNHVLTNLTHNRVTVRSNLAIAATLHVQVHQTTYAL 486

[Close]

BLAST of Clc10G13420 vs. ExPASy TrEMBL
Match: A0A0A0LD06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837050 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 1.8e-247
Identity = 438/475 (92.21%), Postives = 453/475 (95.37%), Query Frame = 0


Query: 36  YMPFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLDNYQYNSLSSAAPTQPHLTATSG 95
           + PF GFVYAIII+AF+ VSESSYSTSYEDHHFMRR+DNY+YNSLSSA P+    TA SG
Sbjct: 10  FRPFLGFVYAIIITAFVTVSESSYSTSYEDHHFMRRVDNYRYNSLSSAPPS----TAMSG 69

Query: 96  SRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLHLDGGTYKI 155
           SRVYHVVAYGADPTGESDSTEAIEKAI DAF+YPT+GHLMKGILDLGGSQLHLDGGTYKI
Sbjct: 70  SRVYHVVAYGADPTGESDSTEAIEKAIFDAFEYPTDGHLMKGILDLGGSQLHLDGGTYKI 129

Query: 156 SRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKDLMLNCNFR 215
           SRPLRLPDI AGNFMIHGGSLRASESFPSN HLIELRPSSP+VMYEYITLKDLMLNCNFR
Sbjct: 130 SRPLRLPDIPAGNFMIHGGSLRASESFPSNGHLIELRPSSPAVMYEYITLKDLMLNCNFR 189

Query: 216 GGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGI 275
           GGGIAIINSLRTTVDNCYISHF SEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGI
Sbjct: 190 GGGIAIINSLRTTVDNCYISHFMSEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGI 249

Query: 276 GVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTR 335
           GVKIMGNDNLLRDIVIYSAEIGVMVLGQANV+MGVHCYNKAR LGGIGIYVKEPGFTQTR
Sbjct: 250 GVKIMGNDNLLRDIVIYSAEIGVMVLGQANVMMGVHCYNKARALGGIGIYVKEPGFTQTR 309

Query: 336 IVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFSGDYTGVKI 395
           IVNCYLDYTGVVVEDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFSGDYTGV+I
Sbjct: 310 IVNCYLDYTGVVVEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFSGDYTGVRI 369

Query: 396 VELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLLLFPNLIKN 455
           VELDES TPFTRIDQVVVDRNNVRGMVVK+TVGRGSTRANGTTWTVDFSSLLLFPNLIKN
Sbjct: 370 VELDESMTPFTRIDQVVVDRNNVRGMVVKSTVGRGSTRANGTTWTVDFSSLLLFPNLIKN 429

Query: 456 VVYSLEMEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQTTYAL 511
           VVYSLEMEQSQG    QVFPNHVLTNL HNRVTV+SN+  AATLHVQVHQTTYAL
Sbjct: 430 VVYSLEMEQSQG----QVFPNHVLTNLTHNRVTVRSNLAIAATLHVQVHQTTYAL 476

[Close]

BLAST of Clc10G13420 vs. ExPASy TrEMBL
Match: A0A6J1J1V1 (polygalacturonase QRT3-like OS=Cucurbita maxima OX=3661 GN=LOC111481950 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 3.4e-241
Identity = 429/485 (88.45%), Postives = 452/485 (93.20%), Query Frame = 0


Query: 38  PFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLD-----NYQYNSLSSAA-----PTQ 97
           PF  FVYA+ IS F+IVSESSYSTSYED HFMRRLD     NYQY+ LSSA+     P+Q
Sbjct: 12  PFIAFVYAVTISEFVIVSESSYSTSYED-HFMRRLDPSRLHNYQYDGLSSASPSHTYPSQ 71

Query: 98  PHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLH 157
            HLT  SGSRVYHVV+YGADPTGE+DSTEAIEKAISDAF+YPT+ HLMKGILDLGGSQ+H
Sbjct: 72  SHLTPISGSRVYHVVSYGADPTGETDSTEAIEKAISDAFRYPTDAHLMKGILDLGGSQIH 131

Query: 158 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKD 217
           LDGGTYKISRPLRLPDIAAGNFMIHGGSLRAS+SFPS+ HLIELRPSSPSVMYEYITLKD
Sbjct: 132 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASDSFPSDGHLIELRPSSPSVMYEYITLKD 191

Query: 218 LMLNCNFRGGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDR 277
           LMLNCNFRGGGIAI+NS+RTTVDNCYISHF SEGIVIEGGHESYIRNSFIGQHIN+GGDR
Sbjct: 192 LMLNCNFRGGGIAIVNSVRTTVDNCYISHFMSEGIVIEGGHESYIRNSFIGQHINMGGDR 251

Query: 278 GEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVK 337
           GEKDFSGIGVK+MGNDN+LRDIVIYSAEIGVM+LGQANV+MGVHCYNKARGLGGIGIYV 
Sbjct: 252 GEKDFSGIGVKMMGNDNVLRDIVIYSAEIGVMLLGQANVLMGVHCYNKARGLGGIGIYVG 311

Query: 338 EPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFS 397
            PGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFS
Sbjct: 312 SPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFS 371

Query: 398 GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL 457
           GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWT DFSSLL
Sbjct: 372 GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTFDFSSLL 431

Query: 458 LFPNLIKNVVYSLEMEQS--QGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQVHQ 511
           LF NLIKNV YSLEMEQ+  QGQGQ+QVFPNH LTN+ HNRVTVQSNV  AATLHVQVHQ
Sbjct: 432 LFRNLIKNVGYSLEMEQTQGQGQGQVQVFPNHALTNVSHNRVTVQSNVAVAATLHVQVHQ 491

[Close]

BLAST of Clc10G13420 vs. ExPASy TrEMBL
Match: A0A6J1F315 (polygalacturonase QRT3-like OS=Cucurbita moschata OX=3662 GN=LOC111441905 PE=4 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 2.2e-240
Identity = 430/486 (88.48%), Postives = 450/486 (92.59%), Query Frame = 0


Query: 38  PFPGFVYAIIISAFIIVSESSYSTSYEDHHFMRRLD-----NYQYNSLSSAA-----PTQ 97
           PF  FVYA+ IS F+IVSESSYSTSYED  FMRRLD     NYQYN LSSA+     P+Q
Sbjct: 12  PFIAFVYAVTISEFVIVSESSYSTSYED-RFMRRLDPSRLHNYQYNGLSSASPSHTYPSQ 71

Query: 98  PHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDLGGSQLH 157
            HLT  SGSRVYHVVAYGADPTGESDSTEAIEKAISDAF+YPT+ HLMKGILDLGGSQ+H
Sbjct: 72  SHLTPLSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFRYPTDAHLMKGILDLGGSQIH 131

Query: 158 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMYEYITLKD 217
           LDGGTYKISRPLRLPDIAAGNFMIHGGSLRAS+SFPS+ HLIELR SSPSVMYEYITLKD
Sbjct: 132 LDGGTYKISRPLRLPDIAAGNFMIHGGSLRASDSFPSDGHLIELRSSSPSVMYEYITLKD 191

Query: 218 LMLNCNFRGGGIAIINSLRTTVDNCYISHFTSEGIVIEGGHESYIRNSFIGQHINVGGDR 277
           LMLNCNFRGGGIAI+NSLRTTVDNCYISHF SEGIVIEGGHESYIRNSFIGQHIN+GGDR
Sbjct: 192 LMLNCNFRGGGIAIVNSLRTTVDNCYISHFMSEGIVIEGGHESYIRNSFIGQHINMGGDR 251

Query: 278 GEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARGLGGIGIYVK 337
           GEKDFSGIGVK++GNDN+LRDIVIYSAEIGVMVLGQANV+MGVHCYNKARGLGGIGIYV 
Sbjct: 252 GEKDFSGIGVKMIGNDNVLRDIVIYSAEIGVMVLGQANVLMGVHCYNKARGLGGIGIYVG 311

Query: 338 EPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISGLNIVDNMFS 397
            PGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNA+VVLKSIGGVISGLNIVDNMFS
Sbjct: 312 SPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNALVVLKSIGGVISGLNIVDNMFS 371

Query: 398 GDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL 457
           GDYTGV+IVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL
Sbjct: 372 GDYTGVRIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTTWTVDFSSLL 431

Query: 458 LFPNLIKNVVYSLEMEQS----QGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAATLHVQV 510
           LF NLIKNV YSLEMEQ+    QGQGQ+QVFPNH LTN+ HNRVTVQSNV  AATLHVQV
Sbjct: 432 LFRNLIKNVGYSLEMEQTQGQGQGQGQVQVFPNHALTNVSHNRVTVQSNVAVAATLHVQV 491

[Close]

BLAST of Clc10G13420 vs. TAIR 10
Match: AT4G20050.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 496.9 bits (1278), Expect = 1.9e-140
Identity = 259/487 (53.18%), Postives = 339/487 (69.61%), Query Frame = 0


Query: 28  LHLKLIQAYMPFPGFVYAIIISAFIIVSESSYSTSYEDHHFMR------RLDNYQYNSLS 87
           + L+  Q  MP    + ++++S  +   + S S S  D            L      +L 
Sbjct: 1   MELRKSQVAMPVFLAIMSLMVSQVVFAEKDSGSMSPHDRALAEMQALKASLVRRNLPALV 60

Query: 88  SAAPTQPHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDL 147
           S  PT P   A  G RVY V++YGADPTG+ DST+AI KA+ +AF  P +G LM+GI DL
Sbjct: 61  SPPPTPPQ--AVPGPRVYQVISYGADPTGKLDSTDAILKAMEEAFDGPNHGVLMQGINDL 120

Query: 148 GGSQLHLDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMY- 207
           GG+++ L GG+Y ISRPLR P   AGN +I GG+LRAS  FP + +LIEL+  S  + Y 
Sbjct: 121 GGARIDLQGGSYLISRPLRFPSAGAGNLLISGGTLRASNDFPVDRYLIELKDESSKLQYI 180

Query: 208 -EYITLKDLMLNCNFRGGGIAIINSLRTTVDNCYISHF-TSEGIVIEGGHESYIRNSFIG 267
            EYITL+DL+++CN+RGG IA+INSLRT++DNCYI+ F  + GI+++ GHE+YIRNSF+G
Sbjct: 181 FEYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLG 240

Query: 268 QHINVGGDRGEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARG 327
           QHI  GGDRGE+ FSG  + +MGNDN + D VI+SA IGVMV GQAN++ GVHCYNKA G
Sbjct: 241 QHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATG 300

Query: 328 LGGIGIYVKEPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISG 387
            GG GIY++ PG TQ RIVN YLDYTG+V EDPVQ+ I+G FFLG+A ++LKSI G I G
Sbjct: 301 FGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRG 360

Query: 388 LNIVDNMFSGDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTT 447
           ++IVDNMFSG   GV+IV+LD+  T F  + QVVVDRN+V GMV K+TV RGS   NGT+
Sbjct: 361 VSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTS 420

Query: 448 WTVDFSSLLLFPNLIKNVVYSLEMEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAAT 506
           WTVDF+ +LLFP+LI +V Y+L   ++       VFP H L N+  NRV V++N P   T
Sbjct: 421 WTVDFNPVLLFPDLINHVQYTLVASEA------GVFPLHALRNVSDNRVVVETNAPVTGT 479

[Close]

BLAST of Clc10G13420 vs. TAIR 10
Match: AT4G20050.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 496.9 bits (1278), Expect = 1.9e-140
Identity = 259/487 (53.18%), Postives = 339/487 (69.61%), Query Frame = 0


Query: 28  LHLKLIQAYMPFPGFVYAIIISAFIIVSESSYSTSYEDHHFMR------RLDNYQYNSLS 87
           + L+  Q  MP    + ++++S  +   + S S S  D            L      +L 
Sbjct: 1   MELRKSQVAMPVFLAIMSLMVSQVVFAEKDSGSMSPHDRALAEMQALKASLVRRNLPALV 60

Query: 88  SAAPTQPHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGILDL 147
           S  PT P   A  G RVY V++YGADPTG+ DST+AI KA+ +AF  P +G LM+GI DL
Sbjct: 61  SPPPTPPQ--AVPGPRVYQVISYGADPTGKLDSTDAILKAMEEAFDGPNHGVLMQGINDL 120

Query: 148 GGSQLHLDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIELRPSSPSVMY- 207
           GG+++ L GG+Y ISRPLR P   AGN +I GG+LRAS  FP + +LIEL+  S  + Y 
Sbjct: 121 GGARIDLQGGSYLISRPLRFPSAGAGNLLISGGTLRASNDFPVDRYLIELKDESSKLQYI 180

Query: 208 -EYITLKDLMLNCNFRGGGIAIINSLRTTVDNCYISHF-TSEGIVIEGGHESYIRNSFIG 267
            EYITL+DL+++CN+RGG IA+INSLRT++DNCYI+ F  + GI+++ GHE+YIRNSF+G
Sbjct: 181 FEYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLG 240

Query: 268 QHINVGGDRGEKDFSGIGVKIMGNDNLLRDIVIYSAEIGVMVLGQANVIMGVHCYNKARG 327
           QHI  GGDRGE+ FSG  + +MGNDN + D VI+SA IGVMV GQAN++ GVHCYNKA G
Sbjct: 241 QHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATG 300

Query: 328 LGGIGIYVKEPGFTQTRIVNCYLDYTGVVVEDPVQVHITGCFFLGNAVVVLKSIGGVISG 387
            GG GIY++ PG TQ RIVN YLDYTG+V EDPVQ+ I+G FFLG+A ++LKSI G I G
Sbjct: 301 FGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRG 360

Query: 388 LNIVDNMFSGDYTGVKIVELDESKTPFTRIDQVVVDRNNVRGMVVKTTVGRGSTRANGTT 447
           ++IVDNMFSG   GV+IV+LD+  T F  + QVVVDRN+V GMV K+TV RGS   NGT+
Sbjct: 361 VSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTS 420

Query: 448 WTVDFSSLLLFPNLIKNVVYSLEMEQSQGQGQIQVFPNHVLTNLKHNRVTVQSNVPAAAT 506
           WTVDF+ +LLFP+LI +V Y+L   ++       VFP H L N+  NRV V++N P   T
Sbjct: 421 WTVDFNPVLLFPDLINHVQYTLVASEA------GVFPLHALRNVSDNRVVVETNAPVTGT 479

[Close]

BLAST of Clc10G13420 vs. TAIR 10
Match: AT4G20040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 377.9 bits (969), Expect = 1.3e-104
Identity = 198/448 (44.20%), Postives = 278/448 (62.05%), Query Frame = 0


Query: 79  SLSSAAPTQPHLTATSGSRVYHVVAYGADPTGESDSTEAIEKAISDAFQYPTNGHLMKGI 138
           +LS  +    H     G +V + + YGADPTG  DS++AI +A++DAFQ  T   ++  +
Sbjct: 50  TLSPVSSPSSHSPKMVG-KVIYPIGYGADPTGGQDSSDAILEALTDAFQLQTGLEMLPRV 109

Query: 139 LDLGGSQLHLDGGTYKISRPLRLPDIAAGNFMIHGGSLRASESFPSNSHLIEL------- 198
            DLGG  + L GG+Y I +PLR P    GN ++ GG+ RASE FP + HL+EL       
Sbjct: 110 ADLGGLVIDLQGGSYMIGKPLRFPSSGGGNLVVKGGTFRASELFPGDRHLVELVASNAKK 169

Query: 199 -------------RPSSPSVMYEYITLKDLMLNCNFRGGGIAIINSLRTTVDNCYISHFT 258
                        +  S  + YE +T +D++ +  FRGGGI +I+S R  + NCY  HFT
Sbjct: 170 PMKMSPEESFSDQKDQSSGIFYEDVTFQDVLFDSRFRGGGILVIDSARIRITNCYFLHFT 229

Query: 259 SEGIVIEGGHESYIRNSFIGQHINVGGDRGEKDFSGIGVKIMGNDNLLRDIVIYSAEIGV 318
           ++GI ++GGHE+YI NSF+GQH  VGGDR E+ F+G G+ I  NDN + D+VI+SA IG+
Sbjct: 230 TQGIKVQGGHETYISNSFLGQHSTVGGDREERGFTGTGIDISSNDNAITDVVIFSAGIGI 289

Query: 319 MVLGQANVIMGVHCYNKARGLGGIGIYVKEPGFTQTRIVNCYLDYTGVVVEDPVQVHITG 378
            + G AN++ GVHCYNKA   GGIGI VK      TRI NCYLDYTG+V+EDPV VH+T 
Sbjct: 290 SLNGGANMVTGVHCYNKATWFGGIGILVKS---HLTRIDNCYLDYTGIVIEDPVHVHVTN 349

Query: 379 CFFLGNAVVVLKSIGGVISGLNIVDNMFSGD-YTGVKIVELDESKTPFTRIDQVVVDRNN 438
             FLG+A +VL+S+ G ISG+NIV+NMFSG       IV+L+     F  I+QVV+D+NN
Sbjct: 350 ALFLGDANIVLRSVHGKISGVNIVNNMFSGTAKNNFPIVKLEGE---FHDINQVVIDQNN 409

Query: 439 VRGMVVKTTVGRGSTRANGTTWTVDFSSLLLFPNLIKNVVYSLEMEQSQGQGQIQVFPNH 498
             GM++K+T G+    ANGT W  DFS +L+FPN I +  +S   +  Q        P +
Sbjct: 410 AEGMMLKSTTGKAMVSANGTRWIADFSPVLVFPNRINHYQHSFFAQSGQ-------IPAN 469

Query: 499 VLTNLKHNRVTVQSNVPAAATLHVQVHQ 506
            +TN+ +N V V+++     T+ +  +Q
Sbjct: 470 AVTNVSNNMVVVETDRAVTGTVSIIAYQ 483

The following BLAST results are available for this feature:

BLAST of Clc10G13420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443524.2	1.5e-251	93.39	PREDICTED: polygalacturonase QRT3-like [Cucumis melo] >KAA0053667.1 polygalactur...	[more]
XP_004141189.2	3.8e-247	92.21	polygalacturonase QRT3 [Cucumis sativus] >KGN59673.1 hypothetical protein Csa_00...	[more]
XP_038905582.1	1.9e-246	91.60	polygalacturonase QRT3-like [Benincasa hispida]	[more]
XP_022983336.1	7.0e-241	88.45	polygalacturonase QRT3-like [Cucurbita maxima]	[more]
XP_022934866.1	4.5e-240	88.48	polygalacturonase QRT3-like [Cucurbita moschata]	[more]

BLAST of Clc10G13420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49432	2.7e-139	53.18	Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1	[more]

BLAST of Clc10G13420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BRF5	7.2e-252	93.39	Polygalacturonase QRT3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3B7S6	7.2e-252	93.39	polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103487092 PE=4 SV=1	[more]
A0A0A0LD06	1.8e-247	92.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837050 PE=4 SV=1	[more]
A0A6J1J1V1	3.4e-241	88.45	polygalacturonase QRT3-like OS=Cucurbita maxima OX=3661 GN=LOC111481950 PE=4 SV=...	[more]
A0A6J1F315	2.2e-240	88.48	polygalacturonase QRT3-like OS=Cucurbita moschata OX=3662 GN=LOC111441905 PE=4 S...	[more]

BLAST of Clc10G13420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20050.1	1.9e-140	53.18	Pectin lyase-like superfamily protein	[more]
AT4G20050.2	1.9e-140	53.18	Pectin lyase-like superfamily protein	[more]
AT4G20040.1	1.3e-104	44.20	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 99..462 e-value: 8.7E-25 score: 89.5
IPR024535	Pectate lyase superfamily protein	PFAM	PF12708	Pectate_lyase_3	coord: 101..318 e-value: 2.7E-7 score: 30.7
IPR039279	Polygalacturonase QRT3-like	PANTHER	PTHR33928	POLYGALACTURONASE QRT3	coord: 38..509
None	No IPR available	PANTHER	PTHR33928:SF4	POLYGALACTURONASE QRT3-LIKE	coord: 38..509
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 95..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G13420.2	Clc10G13420.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0004650	polygalacturonase activity