Clc10G10870 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G10870
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	MuDRA-like transposase
Location	ClcChr10: 24143762 .. 24150660 (+)
RNA-Seq Expression	Clc10G10870
Synteny	Clc10G10870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAGCAAGATTGTGGAGCTGGAGTTGACCTATAACTTCTTGGGGCTAGCTTCAACATCTAAATCAACTATTCGATGGGCCTGGAAAGGAACCCCACCTAGCCTCCTCAAGAAAGCTTTGCATAGTAGGCTGTAGACACTACCTCTGGCTTGGTATTTGGAGGATTGAAAATTGAGGAAGGAAAGAAATCAGGTGATTGGTTAAAGAGCTGTCTCATAAGAGAGTTACTACTAACTACATTGCTTCATGAGGATATGAATGTACATATAAATTGAGAAACTCAGATCTGTCTGTCTTGCTCATGAAGATCACCATGACTGAATACAATTACATCTCTATTCAGATTTCAGAACATGGAAAATACTTTCCAAGTTGAAGACAGTATAAATAAACCAAGAGCTATCATTTTAAACCTTGATGCTGTTTTTGCCATCGAGTTTCATTACGAGCAGCTTTCTCGAGTGTGAAATCTATCCAGCTGATCTCTAAGAAAAAGTTCCATCCGTTCTCTTCTGTTGAACAAAATACTTCGGAACTCTTCTTTGCCATGGGAGTTGCAAACAGAAAGGCCTCACGTGTTCTTATACGTTCTCTAAGTTATTTTCCAAAATGTTTGTGTGCATATGTTTAGGGGCTTTATGCAAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATACCACCTAAGACTGTTGTCCATCCTATAGTTGCTCCAATCTCTTACCTTCAACCGATAAAAGTGTTGCAATTTTTTATCCTTTGATAAGCTTTCGCCTAAACGATTGTTAAAAAAAAAAAAAAAAAAGAGTAGACTAGATTACAAAAAATACCTATGAATTTTACTCTTTGTTTTAACAATAACTATTTTCTTTTAGAAGTTGTAATATTACTTTTAATCTTTTGTAAACCTTTCAAGACCACCGTTAAGGATTGGTAGTGATTAGGATGCTTGCTTGGATTAAGTCTAAAAGAACAATGGTCTAATACATTGGCATCTTGGCCAAAGCATTGCAATTGTTCCACGATCCAGCTCAACATCATAGAAGGCCTTCATGATTTCAAGTAACTCTCATTGATATTGTGTGAAGGACATTAGTAAAATATTCATCGAGATTTTTGTATAGATGACTCAAATCTGATTGTACTAATAATTGAATGACCTAGATTTTGAAAACAATGAGAACTAACCTTTTGCTTCCATAAGTTTTTAGATCGCACTAGCCACTTTCTCCATCTCTGGCTTGCATTCCTCCTTTAAATCCTTACCCTCATGTTTCTCTTTCTTCTTTTCAAACATTGGAAGCAGAGCAAATCCTCACATTCCTCTTTCAAAAAGAAGGAAAGAAAGAAGAAATGTGGGGAAAAGAGGGAGGGTAGTAGGTAGCACGAGTGAGAGGAGAGAAAGGAACACGAGTTAGAGGGATGAAGAAATTAGTGAGCTGGAGTTGAGTGGTATGTGACTTAAACAAAATGTTAGTATTCATTGTTTTTAAAATTTGGGTCATCTGAATAAAATGGAAAATTTCACAAAATGACCTAAAAACAAAAGCTTATTTATGACTAACATATTTCTAAAAACTTTGTTGGTATTGACCTTTTTGGCATATGAAATACCAAATTTACCCTCATGATAAAACCCCAACACCCATCTTCTTCCAATGGTCTAACTTAATTTCGGTTTTCCCAATTCCCTTCTAACTATCGTATTCAATGCAAAACCAACATTCCACCATAACATTTATTTTTCACCAACATTTTACCAAGCATTGAATAACATTGATATGAAGCAATATAGGACAAGTAATGGGAGGTCACTCTTAGCTATTCACTTCCAGTTGAATACTCCAAATTCTCCCATTGTTCTCTCAGTTTTAGGCGAACGTTCTCACTATCGATCATTTCAAATTTTGTTCAGTTGTGTGTTCAGAAATGAAAAGAATAATAATGTAAGTTTTAACTTTTTCATACTTCGCTCAATTTATATCATTCAGTTTATGGCAAAGCGAATGATTATACATACCACAATATAGACGATCACTTATATAATGATAAGGGATCGCCTATATTATGGTATATGTGATCGCCTACCATCATATAAGTGAGCGCTCACCATATTATTGTCAATAACAATTGAATCTAATTGTATTGTAGATCAATGACGCTATTTCGAATCTTTGTATGATATGGTGAGGTGTGGGATCAAACCGACAGTAATTACGTTGGAGATTCTATGAAAGGTTTAAAGGTTAGAAATGATATAACGTGTAGTGAATTAATCGGTATTCTGCATGAACGTGTAAATATCAATCCAAAGAGGTTCGTTATACAAATCAAATGTTGTCATAATCTATTGGTCCCAACTCCTCCAATTGACATAATCAATGATGAAGACCTTAGTTTTTTTTTAGAAGGCAATGATGCATCTTGGATGCCGTTGTTTGTATCAGTGACACCGAATGGCAGTGATGGAATAGACATTAAGAATTCGACCATTCCAACCATTCCAACTAGTCAACATTTTGACTTTTCAACCATTCCAACGCACAATATTCTTATCATGTCTTCATTAAACAAGAATGTCGAGCCGTGTAATTTGGGGGATGATAGAAATGAAACTTGGTTAGGTCACAATGCCCAATCGAGATGTTCTCCATAGTTCGATACTAACCATGGATACAGACAACTTTCAGGACCACAAACAGTCCCAACACCTTTTGTTCAGATTCCAACCCCACTTACTCCCATTCCACCAATGGTGATGCCCTCGGTTCCAACCCAGTCGAGTGTTCGGACCCAACCATTTGTAGATGTACCTAGACCATTTGATGGGCCATCATATGATGACATTATCTCAAGACTGCACAACTGTCTTAACGACGAGGACAAATGATTTATCAGTTAAATTGTCAATACTAGCAATAAGAAAAAACTTTGACTACTGTGTAAAGAAGTCGACAAAGAGTTTGTTAACTGTACGGTGTTTAGTGGAGGAATGTAAGTGGCGGGTTCGTGCAAAAAGATTAGAAGGTAAAGACTCCTTCAAAGTGATGACGTATCCAAACGTCCACACATGCACACTTGAAATAAGAAGTGGTAATCACCGATAAGCTAAAAGTTGGGTTATTGGTCATTTAATTAAGTTCGAATATGATCAAGTTGGTCGATCGTATCGCCTAAGTGATATAATTGAAGATGTACAAAGAGATTATGGGGTGAATATAAACTATGGACGATCTTACTACGCAAGAGAGTACACATTAGTGTATGCTAGAGGGTCGTCAGAAGGATCATATGCAATTGTTAACGCATATGGTGAGGCATTGAAGCTTACAAATCCAAGTACAATTTTTTAGGTTGAAATAGAAGAACAATATTTTAAGTACGCTTTCATGGCATTGGGATCGTGTATTAAGGGATGCTTGAACTGCATTCGCCCTGTAGTTGCTGTTGATGGGACCCACTTGCATGAGAAATATAAAGGTATGTTGTTAATAGCAACGTGTGTAGATGGTAATAACAACATATACCCTCTTGCTTTCGACATTGTAGATGGTGAGAATGATGCATCCTAGAGTTGGTTCATGACTAATTTGAATGCCTCGATTGAATATTCAAGGATTAGTCATTGTATCAGATCGTCATATCTAACTTGCGAAGGCAGTCACAATTATATTTCTTAATGTATTTGATGCCTTATACATATATCACATTCGGAATAATTTGATCGATAAATTAAAAAACAAAGATATAATCCCACACTTCTATCTTGCGACCAAAGCTTATAGGATGTTTGAGTTTGAAATATATTGGGTTAAGCTCCAACCATATCCTAGGGTGACGACCTATCTTTAAGAAATTGGATATAGCGGTGGTCAAAAGTTTATCAAGTTCATTGTAGGTATGACAAGATGACCACGAACATAGTAGAATGCCTCAATGGAGTATTAAAAGATGCTTGAGAACTTTCTATTACAAAGCTATTAGAGTATATACGTGAGTGACTACATGGTTGGTTCTACATCTGTCCTACACATGGAATAGCATATACAATCATCGTTTCTGACTATGCAATGAAAATTCTAAAAGTAGAAGAATTAAATTCTAGAACATATCGTACTTTCCTAGTTGACATGCATGTAATTAACGTAGATGATGGATACTTGGGGGTTTGGTTGATTTGCGTTCTTGTATATGTAGTTGTATGGAGTATAATTGCTTGGAGATTCCATGCTCTCGTGCAATTGCGGCGGTGGCGCTTCGCAACATTAATGTTCAAACATCTTGTGCAAAGTGGTTTGTTGTTGAATGTGTACTTGCCTAGTATGTGGAACCAATTTACCTCGTTGGATGTAGACAAGAATGGGAATGAGGGCTAGATTTTGAAGACTTCAAAGTTTTACCACCGAAAAGGTACCAAGCATTGGTCGACGTCAGACCCTTTGAATACCTTCTGTTGGGGAGGAACCACAACAAATACACAGATGTACAAGACGTGGTGGCAAAGGACATAAAAAGAAGACCCGTAGACAGACATTGATAACACCAGGCACGAGTCCGTATAGGGTGAATGACATGTAAGCGATTGTTTATCGGTTGATATGTGATTGTTTACATTTCAATGGTCAATTGTGTATTCAATATGTGAGCTATTGCATAACAAATAGTAAGTGATCGCCTACTACATGATAAGCGATCACTTATGAGTTGATACGCGATTGTTTACATTTCAGTGGGTGATCGCATATTCAATATGTGAGCTATCGCATAACAAATAGTAAGTGATCGCCTACTACATGATAAATGATTGCCTACCATGTTGTAAGCAATTGCCTACTATATGATAAGTGATCGCCTACTAAAAAGTAAGCAATCACATACCAATTGGTAAGTGATCGTTTATCCAAATGGTAAGCGATCACATATCAATTGTTAAGCATTCACATATTGTATTATCTGGCGGATCATGCAAATGTCAAATTTGATGGCCTAAATTGAATGAGAATTAGATGAGTTATACAACTTTATTAGAAATTACCATAAATATTTATTTGCTCACAACTCGACCACGTATTGTTTTCTAAACAAAGGCATGTTATCTTGTTTTAGGCTTTCCCTATCTGTATTAGTTACAAGATATTCTATAAACTTAGCACAAAAAATGACACAATCAAGAGATTGTTGTATTGGAAGGTCACCTTCGATTGCCTCATTCCCATGGCCCATACTTGAATCTACCATTTGTCTTATCGAACCCAACAACTATCAAGATGGAGGGTATTGCTCTAGATAGTGTTCGCAAACCATCCTCCACGATTTTGGTATCGATATCGTTTGGCATGGAGTCGAATATGAAGATAATGTTGGAACGCATGTTAATGACAACCATGAGCCAATGTTGTCTCATGTTTATTGGCCAACAAATGAACTCAACATCCGTCCACGCAGGTTTATACTCTTTATGTTGGCCAAGCACGTAGTCTACATAGTACTTATTGTCTTCCCAGAACATACTATATGCTCCTTGGTTTGTCCAGACTGCCAAATTTCCATCCTTCATTACCAATCCATCTTCACGGATCTTTCACGAAGTGCCTTTTGGCTCGATGATGGCATCCTAAAAGTAATATATATATATATATATATATATATATATATATGAAGTGTTATCAAAGACTTATATACGATATAAGGGTGATTTCTAAAGTGAAATTCCTTACCATGAAGCTGGAATCCACCGCTGTAAACAAATACTTGTAGAGGTTAGGTCTTGAATGCAGCTTACGTTTCATGTGCATCACTAAGAGGTCTAGATGATCGCATATACCTAAACATCGCATATAGTAACCTAAACGAACAATATGAGAAATAAAATTTTAAATGATCTAAATTTAACATAAATGATCGCGTATACCTAAACATAGCATATAGTAACCTAAACGATCGTGTATATTAACCTAAATGATCGCAACCTAAACGATTTGCATAAACCATGCAAGGGACGATAGTAGGGAAGTATCTCTCAACAAGGACTAAATGTGTCATCTTAGCAAACTGTAAAAAAATTCAGCGATCGTGTATAATCAATTAAGCGATCATGTATAAAAAAGCTAACGATCATGTATAAACAATTAAGCGATCATGTATAAACAAATAAGTGATCATGTATAAATAGCTAAGCGATCATGTATTAACAATTAAGCAATCGTGTATTAATGGCAAACGATCGTGTATTTACGGCAAGCGATTGTGTATAAACAGCTAAGCAATTGTGTATTAACAACTAAATGATTGTGTATTAAAAGCTAAGCGATCTTTTATCACAAACTAAGCAATCGTGTACTAAAACATATAAGTGATTGTGTAATAAAACCTAATCGATCGTGTATAGCAAACTATGCGATATTGTATTAGAAAATAGGCGATCGTTTATATAGTATTAAGCGAACGATATACATTTCTAAAAAACAACGATAGAGAAGAGGAACATACCTTCTAGATTACTAGAACGATGTCGATAGTGTAGAAACGAACGATGAAAGGGGATGGAAACGCTTGGAGATGATGAGAGAAACTTGGGGAAAATGTAGACAATTAAGAAAATATGAAAAAGAGAGCGTGAGGAGAACTTAAAAGATCGTGAATGTGAACAATCGTTCACCTTCTATTGTTTAATGCGTGCCTTTTCAAATTGGGGGTAAAAATGATATTTTACATATGAAAAATGTCAATAAGACTTCAGTTTTTAAGAAGTGAGGTGAGTCCCAAGATGTTCTTAGTTTTTGGGTCATTTGATACAATTTTCCAGATAAAAACTCATATCTTATCTATCCAATTCATCTCCACTCCTATTTTAAGGTGAAAATTTGAGACAAGATCG

mRNA sequence

ATGCTGAGCAAGATTGTGGAGCTGGAGTTGACCTATAACTTCTTGGGGCTAGCTTCAACATCTAAATCAACTATTCGATGGGCCTGGAAAGGAACCCCACCTAGCCTCCTCAAGAAAGCTTTGCATATGACACCGAATGGCAGTGATGGAATAGACATTAAGAATTCGACCATTCCAACCATTCCAACTAGTCAACATTTTGACTTTTCAACCATTCCAACGCACAATATTCTTATCATGTCTTCATTAAACAAGAATGTCGAGCCGTATTCCAACCCCACTTACTCCCATTCCACCAATGGTGATGCCCTCGGTTCCAACCCAGTCGAGTGTTCGGACCCAACCATTTGTAGATTTGGTCGATCGTATCGCCTAAGTGATATAATTGAAGATGTACAAAGAGATTATGGGGTGAATATAAACTATGGACGATCTTACTACGCAAGAGAGTACACATTAGTGTATGCTAGAGGGTCGTCAGAAGGATCATATGCAATTGTTAACGCATATGGTGAGGCATTGAAGCTTACAAATCCAATTGCTGTTGATGGGACCCACTTGCATGAGAAATATAAAGTTGTATGGAGTATAATTGCTTGGAGATTCCATGCTCTCGTGCAATTGCGGCGGTGGCGCTTCGCAACATTAATGTTCAAACATCTTGTGCAAAGTGGTTTGTTGTTGAATGTGTACTTGCCTAGTATGTGGAACCAATTTACCTCGTTGGATGTAGACAAGAATGGGAATGAGGGCTAGATTTTGAAGACTTCAAAGTTTTACCACCGAAAAGGTACCAAGCATTGGTCGACGTCAGACCCTTTGAATACCTTCTGTTGGGGAGGAACCACAACAAATACACAGATGTACAAGACGTGGTGGCAAAGGACATAAAAAGAAGACCCGTAGACAGACATTGATAACACCAGGCACGAGTCCGTATAGGGTGAATGACATGTGAAAATTTGAGACAAGATCG

Coding sequence (CDS)

ATGCTGAGCAAGATTGTGGAGCTGGAGTTGACCTATAACTTCTTGGGGCTAGCTTCAACATCTAAATCAACTATTCGATGGGCCTGGAAAGGAACCCCACCTAGCCTCCTCAAGAAAGCTTTGCATATGACACCGAATGGCAGTGATGGAATAGACATTAAGAATTCGACCATTCCAACCATTCCAACTAGTCAACATTTTGACTTTTCAACCATTCCAACGCACAATATTCTTATCATGTCTTCATTAAACAAGAATGTCGAGCCGTATTCCAACCCCACTTACTCCCATTCCACCAATGGTGATGCCCTCGGTTCCAACCCAGTCGAGTGTTCGGACCCAACCATTTGTAGATTTGGTCGATCGTATCGCCTAAGTGATATAATTGAAGATGTACAAAGAGATTATGGGGTGAATATAAACTATGGACGATCTTACTACGCAAGAGAGTACACATTAGTGTATGCTAGAGGGTCGTCAGAAGGATCATATGCAATTGTTAACGCATATGGTGAGGCATTGAAGCTTACAAATCCAATTGCTGTTGATGGGACCCACTTGCATGAGAAATATAAAGTTGTATGGAGTATAATTGCTTGGAGATTCCATGCTCTCGTGCAATTGCGGCGGTGGCGCTTCGCAACATTAATGTTCAAACATCTTGTGCAAAGTGGTTTGTTGTTGAATGTGTACTTGCCTAGTATGTGGAACCAATTTACCTCGTTGGATGTAGACAAGAATGGGAATGAGGGCTAG

Protein sequence

MLSKIVELELTYNFLGLASTSKSTIRWAWKGTPPSLLKKALHMTPNGSDGIDIKNSTIPTIPTSQHFDFSTIPTHNILIMSSLNKNVEPYSNPTYSHSTNGDALGSNPVECSDPTICRFGRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNPIAVDGTHLHEKYKVVWSIIAWRFHALVQLRRWRFATLMFKHLVQSGLLLNVYLPSMWNQFTSLDVDKNGNEG

Homology

[Close]

BLAST of Clc10G10870 vs. NCBI nr
Match: XP_038896643.1 (uncharacterized protein LOC120084906 [Benincasa hispida])

HSP 1 Score: 113.2 bits (282), Expect = 3.2e-21
Identity = 57/87 (65.52%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 120 GRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNP 179
           G++YRL DIIEDV+RDYGVNI+YG++Y A+EY LVYARGS EGS+AIV AYGE LK TNP
Sbjct: 13  GQTYRLRDIIEDVRRDYGVNISYGQAYRAKEYGLVYARGSPEGSHAIVRAYGETLKFTNP 72

Query: 180 --------------IAVDGTHLHEKYK 193
                         I VDGTHLHEKYK
Sbjct: 73  GTIFEGFLNCIRPVIVVDGTHLHEKYK 99

[Close]

BLAST of Clc10G10870 vs. NCBI nr
Match: XP_038904293.1 (uncharacterized protein LOC120090647 [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 6.9e-16
Identity = 61/162 (37.65%), Postives = 79/162 (48.77%), Query Frame = 0


Query: 80  MSSLNKNVEPY------SNPTYSHSTNGDALGSNPVECSDPTICRFGRSYRLSDIIEDVQ 139
           MSSL+ ++EPY      S   + HS+                  RF R+YRL DI+E+V+
Sbjct: 1   MSSLDDHIEPYNLKDDQSEVCFGHSSER----------------RFVRTYRLRDIVEEVR 60

Query: 140 RDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNP-------------- 199
           RDYGVNI+Y ++Y+ REY L +ARG  +GSY I  AYGE LKL NP              
Sbjct: 61  RDYGVNISYEQAYHTREYELTFARGLPKGSYTIARAYGETLKLANPDMIFEVEIKDKKYF 120

Query: 200 ---------------------IAVDGTHLHEKYKVVWSIIAW 201
                                I VDGT+LH+KYK V  I  +
Sbjct: 121 KYVFMALGPCIRGFLNCIYAAIVVDGTYLHKKYKGVLLIATY 146

[Close]

BLAST of Clc10G10870 vs. NCBI nr
Match: XP_038895820.1 (uncharacterized protein LOC120083989 [Benincasa hispida])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-14
Identity = 55/108 (50.93%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 120 GRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNP 179
           GR+Y  +DIIEDV+RDYGVNI+YG +Y  REY LVYARGS E SYAIV A G+A KL NP
Sbjct: 26  GRTYCPTDIIEDVRRDYGVNISYGWTY--REYRLVYARGSPEESYAIVRASGKAFKLANP 85

Query: 180 -----------------------------------IAVDGTHLHEKYK 193
                                              IAVDGTHLHEKYK
Sbjct: 86  GTIFKVEVEDGQYFKYVFMALGSCIRGFLNCIRPVIAVDGTHLHEKYK 131

[Close]

BLAST of Clc10G10870 vs. NCBI nr
Match: XP_038884809.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Benincasa hispida])

HSP 1 Score: 88.6 bits (218), Expect = 8.4e-14
Identity = 51/108 (47.22%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 120 GRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTN- 179
           GR Y L  IIEDV+R+YGVNI YGR+Y  +EY L+Y RG  EGSYAIV AY EALKL N 
Sbjct: 39  GRIYYLRYIIEDVRREYGVNITYGRAYCTKEYRLMYTRGPPEGSYAIVRAYDEALKLANL 98

Query: 180 ----------------------------------PIAVDGTHLHEKYK 193
                                              I VDGTH HEKYK
Sbjct: 99  GTIFEVEVEDVQYFKYVFMALCPCIRGFLNCIRPVIVVDGTHFHEKYK 146

[Close]

BLAST of Clc10G10870 vs. NCBI nr
Match: XP_038876499.1 (uncharacterized protein LOC120068931 [Benincasa hispida])

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13
Identity = 51/108 (47.22%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 120 GRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNP 179
           GR+YR  DIIEDV+R+YGVNI Y R+Y  REY LVY RGS +GSY +V AY EALKL N 
Sbjct: 112 GRTYRPRDIIEDVRREYGVNITYRRAYRTREYGLVYPRGSPKGSYDVVRAYDEALKLINS 171

Query: 180 -----------------------------------IAVDGTHLHEKYK 193
                                              I VD THLHEKYK
Sbjct: 172 STIFDVEVEDEQYFKYVFMALGPCIKGFLNCILPIIVVDRTHLHEKYK 219

[Close]

BLAST of Clc10G10870 vs. ExPASy TrEMBL
Match: A0A5A7V2Q6 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold160G00220 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 118 RFGRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLT 177
           R  R Y+  DIIED+++DYG+N++Y +++ ARE      RGS E SY ++  YGEALKLT
Sbjct: 60  RVSRLYKPCDIIEDMRQDYGINMSYEKAWRARENAYERVRGSPEESYNLLRRYGEALKLT 119

Query: 178 NP---------IAVDGTHLHEKYK 193
           NP         I +DGT L  KY+
Sbjct: 120 NPGFLNCIRSIIVMDGTFLKNKYR 143

[Close]

BLAST of Clc10G10870 vs. ExPASy TrEMBL
Match: A0A5A7TEC4 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00700 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-10
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 120 GRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNP 179
           GR Y+  DIIED+++DYG+N++Y +++ ARE      RGS E SY +++ YGEALK TNP
Sbjct: 311 GRIYKPRDIIEDMRQDYGINMSYEKAWRARENAYERVRGSPEESYNLLHRYGEALKFTNP 370

Query: 180 ---------IAVDGTHLHEKYK 193
                    I +DGT L  KY+
Sbjct: 371 GFLNCIRPIIVMDGTFLKNKYR 392

[Close]

BLAST of Clc10G10870 vs. ExPASy TrEMBL
Match: A0A5A7V6Q4 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G00450 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.6e-10
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 120 GRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNP 179
           GR Y+  DIIED+++DYGVN++Y +++ ARE      RGS E SY ++  YGEALK TNP
Sbjct: 120 GRIYKPRDIIEDMRQDYGVNMSYEKAWCARENAYERVRGSPEESYNLLRRYGEALKFTNP 179

Query: 180 ---------IAVDGTHLHEKYK 193
                    I +DGT L  KY+
Sbjct: 180 GFLNCIRPVIVMDGTFLKNKYR 201

[Close]

BLAST of Clc10G10870 vs. ExPASy TrEMBL
Match: A0A5A7VF66 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold62G00120 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-10
Identity = 57/162 (35.19%), Postives = 78/162 (48.15%), Query Frame = 0


Query: 48  SDGIDIKNSTIPTIPTSQHFDFSTIPTHNILIMSSLNKNVEPYSNPTYSHSTNG------ 107
           S+  D+K   +   P       S  PT N   M  LNK+    S      + N       
Sbjct: 77  SNDRDLKFYILSENPLEVPLYLSFEPTSN-RSMKVLNKDYNSVSGSNQVQNLNPHPPIGM 136

Query: 108 DALGSNPVECSDPTICRFGRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSE 167
           D L  N V+  +  +   GR Y+  DIIED+++DYG+N+ Y +++ ARE      RGS E
Sbjct: 137 DTLDENEVDIGE--VQGPGRIYKPRDIIEDMRQDYGINMIYEKAWRARENAYERVRGSPE 196

Query: 168 GSYAIVNAYGEALKLTNP---------IAVDGTHLHEKYKVV 195
            SY ++  YGEALK TNP         I +D T L  KY+VV
Sbjct: 197 ESYNLLRRYGEALKFTNPGFLNCIRPVIVMDETFLKNKYRVV 235

[Close]

BLAST of Clc10G10870 vs. ExPASy TrEMBL
Match: A0A5A7U9N8 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00440 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-10
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 120 GRSYRLSDIIEDVQRDYGVNINYGRSYYAREYTLVYARGSSEGSYAIVNAYGEALKLTNP 179
           GR Y+  DIIED+++DYG+N++Y +++ ARE      RGS E SY ++  YGEALK TNP
Sbjct: 845 GRIYKPRDIIEDMRQDYGINMSYEKAWRARENAYERVRGSPEESYNLLRRYGEALKFTNP 904

Query: 180 ---------IAVDGTHLHEKYK 193
                    I +DGT L  KY+
Sbjct: 905 GFLNCIRLVIVMDGTFLKNKYR 926

The following BLAST results are available for this feature:

BLAST of Clc10G10870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896643.1	3.2e-21	65.52	uncharacterized protein LOC120084906 [Benincasa hispida]	[more]
XP_038904293.1	6.9e-16	37.65	uncharacterized protein LOC120090647 [Benincasa hispida]	[more]
XP_038895820.1	1.3e-14	50.93	uncharacterized protein LOC120083989 [Benincasa hispida]	[more]
XP_038884809.1	8.4e-14	47.22	protein FAR-RED ELONGATED HYPOCOTYL 3-like [Benincasa hispida]	[more]
XP_038876499.1	1.4e-13	47.22	uncharacterized protein LOC120068931 [Benincasa hispida]	[more]

BLAST of Clc10G10870 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G10870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V2Q6	2.1e-10	46.43	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A5A7TEC4	3.6e-10	46.34	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3...	[more]
A0A5A7V6Q4	3.6e-10	47.56	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7...	[more]
A0A5A7VF66	4.7e-10	35.19	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A5A7U9N8	4.7e-10	46.34	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3...	[more]

BLAST of Clc10G10870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G10870.1	Clc10G10870.1	mRNA