Clc03G00870 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G00870
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	60S acidic ribosomal protein P0
Location	ClcChr03: 778366 .. 781054 (+)
RNA-Seq Expression	Clc03G00870
Synteny	Clc03G00870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCATTCCTATTAGGGTTTCTTATTCCGGCAAATTTCTTCCCCCAATCTTCAGCCATGGTTCTCAAACCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTTCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCTAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGTTCCATCAGAATCCATTCTGAGAAGACCGGTAACACCGCCACCATGAACCTCCTCCCTCATCTTGTGGTACGGACTCCCCCCCCTCTCCCTTTAACTCCATTTTGGTTTTTGTGGTCTCTTGTTAATCTCAACGAGATTTCTTCGATCCATAGGGAAACGTCGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTATATATATATATATTGTGTTTTTGGGTTTGTACTTTGTGCTATGATATCCATGTATATTGCCTGAGGCTTGTTTGGTAATTTCCGTACAAGTTATGTGCTAGTTTTCAGATTTGCCTTTTACTTATTGTTCTGATAAAAGAGTTATCATTGCAAATATTATGATGGTTTGTTGATAAAAATGAATTGATCATTGAGAAAGGTATAAGATTTGTATGAAACTGTATCATAATGTGATAATCAAGTGAATGGTTTATTCATTCTAGAAGTTAAAACCGCTAATTACGTTAAGAAAAGAAAATGTGACAATTTTTAAATAATAACGTTCAAGCAAATGTGACTCAAGATTTATTGTATGGATGCCTGCAGTTCATGGTTCAGTTTAGTTGGATTATTTTGAGGAAGTTTGTTCTATCTATTTTGGTTTTAAAGATTCCACCTTTAGTTTGTTTTCAAATTTGTTTTTTAGAGTGTACGGGTTGATTCGAGATTGTTTTGATCTAATTTGTTTTAATCAATGGGTATGAGGTTGAGGTAGTTCTATATCATACGTTAACGGAGAAAGTGCTTGGCAGCCTCCTCGAATAATTTCAATACTTACGCTCAATATTGTTTATTTGTACAACTTTTATACATGATATGCATTTATGGAAACAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGACGTGGTTGTTCCTCCAGGAAACACTGGACTCGATCCTTCCCAGACATCTTTCTTTCAGGTTTCTTATAAAACTAATTTCCTCCATTTTTAAACTATTCAACTTGGAAAACGATATTAACTTGGAAGTCGAATTGATCTTAGGTGCTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGGGCTAATCAAGAAAGGAGACAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGAAAATGGTTCTGTTTTCGATCCAGAGGTGCTTGATCTTACAGAAGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGGTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGTTCGTTTAAACACCTTTACATATCGAAGGCTTAGATATAATTTTGGTGCCGGAAGTTTTGGTTTTCAACAACTTTCTATTTAGATCCAGTTTTGATTTGATAAAGTTTTGTTTTGATCTTTTTAATTACTTTCTAAATTAGACCTTTTAACAGCTAAAACCTCAACTTTACCCTTCAAATTTGTTAAGTTTTACATTCATTAGTCCCTACGATAGAAGTAATGATCTGAACAAATCTGAAAATTTAACCCCCTCTCTATATATATAGATTACAACAAATGGGGTAGAAGTTCCTACTAACTTTTTAATATGGCATATTTTTATGGACATTTTAGTGGATCCACTTATCTTAGACATTCATTTTAGTAGGATCCATCTATCTGTTAAATTCAGTAGTAAAAATTATTTATGAACTTGAAAGGAGTTACATTTTAAAATGGTATGATGGGACTTATTTGGTATGATGAAAATTTTGTAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTTCTGCGGTGGCCGAGTCTGGAGGCGCTACCTCAGCCGCTGCTGCCCCTGCCGCGAAGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCAGATGAGGATATGATCATGGGTCTGTTTGACTAAGTTCAAAGTTCAGAAAATTATTCCAACCCATCTAGTTTTATGTTTTTATGTTTTTATGTTTTTATGTTTATATGATCAGAAGAGATATTTTCAGTTGGTTTGTCAAATTTGTGGTGAAGATTTTGTGCTTTTTTACTGTTCTTCTTGTGAACATGAACCACTCATTTGATAATGAATGGTGGTTGAGTGGTTACTCGTTTTCTTAACATTAGAACTTTATTTTATTATATGCTCTACTGAAGATTGAAGAACTAGTCCATTAAAAAGAAAAACGTGTTGTGTTGTGTTGTGCTCACCTTGTCTTTTTGTCTTTTACCACCACAAAACTTATTTAATGGAAGCTCTTTTTCTCTC

mRNA sequence

CACCATTCCTATTAGGGTTTCTTATTCCGGCAAATTTCTTCCCCCAATCTTCAGCCATGGTTCTCAAACCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTTCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCTAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGTTCCATCAGAATCCATTCTGAGAAGACCGGTAACACCGCCACCATGAACCTCCTCCCTCATCTTGTGGGAAACGTCGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGACGTGGTTGTTCCTCCAGGAAACACTGGACTCGATCCTTCCCAGACATCTTTCTTTCAGGTGCTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGGGCTAATCAAGAAAGGAGACAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGAAAATGGTTCTGTTTTCGATCCAGAGGTGCTTGATCTTACAGAAGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGGTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTTCTGCGGTGGCCGAGTCTGGAGGCGCTACCTCAGCCGCTGCTGCCCCTGCCGCGAAGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCAGATGAGGATATGATCATGGGTCTGTTTGACTAAGTTCAAAGTTCAGAAAATTATTCCAACCCATCTAGTTTTATGTTTTTATGTTTTTATGTTTTTATGTTTATATGATCAGAAGAGATATTTTCAGTTGGTTTGTCAAATTTGTGGTGAAGATTTTGTGCTTTTTTACTGTTCTTCTTGTGAACATGAACCACTCATTTGATAATGAATGGTGGTTGAGTGGTTACTCGTTTTCTTAACATTAGAACTTTATTTTATTATATGCTCTACTGAAGATTGAAGAACTAGTCCATTAAAAAGAAAAACGTGTTGTGTTGTGTTGTGCTCACCTTGTCTTTTTGTCTTTTACCACCACAAAACTTATTTAATGGAAGCTCTTTTTCTCTC

Coding sequence (CDS)

ATGGTTCTCAAACCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTTCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCTAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGTTCCATCAGAATCCATTCTGAGAAGACCGGTAACACCGCCACCATGAACCTCCTCCCTCATCTTGTGGGAAACGTCGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGACGTGGTTGTTCCTCCAGGAAACACTGGACTCGATCCTTCCCAGACATCTTTCTTTCAGGTGCTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGGGCTAATCAAGAAAGGAGACAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGAAAATGGTTCTGTTTTCGATCCAGAGGTGCTTGATCTTACAGAAGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGGTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTTCTGCGGTGGCCGAGTCTGGAGGCGCTACCTCAGCCGCTGCTGCCCCTGCCGCGAAGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCAGATGAGGATATGATCATGGGTCTGTTTGACTAA

Protein sequence

MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTMMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKLGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAPHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPAAKEEKKEEPEEESDEDMIMGLFD

Homology

[Close]

BLAST of Clc03G00870 vs. NCBI nr
Match: XP_038895318.1 (60S acidic ribosomal protein P0-like [Benincasa hispida])

HSP 1 Score: 575.1 bits (1481), Expect = 3.8e-160
Identity = 307/324 (94.75%), Postives = 316/324 (97.53%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKK  YDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT
Sbjct: 1   MVLKPTRAQKKAQYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+A  NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNSAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIVLSVY+NGSVFDPEVLDLTEEDLLEKFLAGVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALAVAVAT+YSFPQADEIKE+LKDP+KFAAAAAP+AVAESGGA  AAAAP
Sbjct: 241 PHMLINAYKNALAVAVATDYSFPQADEIKEYLKDPNKFAAAAAPAAVAESGGA--AAAAP 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
           AA+EEKKEEPEEESDEDMIMGLFD
Sbjct: 301 AAQEEKKEEPEEESDEDMIMGLFD 322

[Close]

BLAST of Clc03G00870 vs. NCBI nr
Match: XP_022150896.1 (60S acidic ribosomal protein P0-like [Momordica charantia])

HSP 1 Score: 559.7 bits (1441), Expect = 1.7e-155
Identity = 297/324 (91.67%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKK+ YDQKLCRLL EYSQVLIVGADNVGSNQLQ+IR+GLRGDSIVLMGKNT
Sbjct: 1   MVLKPTRAQKKSQYDQKLCRLLGEYSQVLIVGADNVGSNQLQNIRQGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTA M+L+PHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVMSLVPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DLLEKFL GVSMVAS+SLA+SFPTLA A
Sbjct: 181 LGIRPFSYGLLVLSVYDNGSVFSPEVLDLTEDDLLEKFLTGVSMVASVSLALSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALAVAVATEYSFPQA+E+KEFLKDPSKFAA AAP+A AESGGA  AAAAP
Sbjct: 241 PHMLINAYKNALAVAVATEYSFPQAEEVKEFLKDPSKFAAVAAPAAAAESGGAAPAAAAP 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
           AAKEE KEEP EESDEDMIMGLFD
Sbjct: 301 AAKEE-KEEPAEESDEDMIMGLFD 323

[Close]

BLAST of Clc03G00870 vs. NCBI nr
Match: XP_022964942.1 (60S acidic ribosomal protein P0-like [Cucurbita moschata] >XP_023520060.1 60S acidic ribosomal protein P0-like [Cucurbita pepo subsp. pepo] >KAG6583371.1 60S acidic ribosomal protein P0-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019142.1 60S acidic ribosomal protein P0-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553.1 bits (1424), Expect = 1.6e-153
Identity = 297/324 (91.67%), Postives = 310/324 (95.68%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MV+KPTRAQKKT YD+KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVVKPTRAQKKTQYDKKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+A MNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP+A  ESGGA SAAAAP
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESGGA-SAAAAP 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
            A+EEK  EPEEESD DMIMGLFD
Sbjct: 301 -AEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of Clc03G00870 vs. NCBI nr
Match: XP_022970458.1 (60S acidic ribosomal protein P0-like [Cucurbita maxima])

HSP 1 Score: 552.4 bits (1422), Expect = 2.7e-153
Identity = 295/324 (91.05%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT YD KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTQYDNKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+A MNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP+A  ESGGA +AAA  
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESGGAPAAAA-- 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
            A+EEK  EPEEESD DMIMGLFD
Sbjct: 301 PAEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of Clc03G00870 vs. NCBI nr
Match: XP_008457380.1 (PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo] >XP_016902088.1 PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo] >TYJ97321.1 60S acidic ribosomal protein P0-like [Cucumis melo var. makuwa])

HSP 1 Score: 551.2 bits (1419), Expect = 5.9e-153
Identity = 296/325 (91.08%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTA  NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVF P VLDLTEEDLLEKFLAGVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP+A A+     S  AAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAK-----SVVAAP 300

Query: 301 AAKEEKKEEPEEESD-EDMIMGLFD 325
           AA E+KKEEPEEESD EDMIMGLFD
Sbjct: 301 AAMEDKKEEPEEESDEEDMIMGLFD 320

[Close]

BLAST of Clc03G00870 vs. ExPASy Swiss-Prot
Match: P50346 (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.3e-136
Identity = 254/324 (78.40%), Postives = 285/324 (87.96%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M  K T+A+KK  YD KLC L+EEY Q+L+V +DNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+R+H+EKTGN A +NL+P LVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LI+KGDKVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DL+ KF AGVSMV S+SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN LAVAV T+YSFP+AD++KE+LKDPSKFA AA  +  A SG    A AA 
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASG----APAAA 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
           A +EEKKEEP EESD+DM   LFD
Sbjct: 301 AKEEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Clc03G00870 vs. ExPASy Swiss-Prot
Match: P57691 (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 3.9e-131
Identity = 247/323 (76.47%), Postives = 286/323 (88.54%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE +GNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVAT+Y+FPQA+++KEFLKDPSKF  AAA +  A++GG ++ A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AKEEKKEEPEEESDEDMIMGLFD 325
             EEKKEE +EE D +   GLFD
Sbjct: 301 KVEEKKEESDEE-DYEGGFGLFD 321

[Close]

BLAST of Clc03G00870 vs. ExPASy Swiss-Prot
Match: P41095 (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP0 PE=1 SV=3)

HSP 1 Score: 467.6 bits (1202), Expect = 1.1e-130
Identity = 243/324 (75.00%), Postives = 285/324 (87.96%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD+KLC+LL+EY++VLI  ADNVGSNQLQ IRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           +++R I++H++ TGN   + L+P LVGNVGLIFTKGDLKEV+EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           P+DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSE+ALL+K
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL++ +VY++GSVF PEVLDLTE+DL+EKF +GVSMVAS+SLA+S+PT+A A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +N YKN LAVAV TEYS+P AD+IKE+LKDPSKFA AA     A+SG   +AA + 
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAA--PVAADSG---AAAPSA 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
           A +EEKKEEPEEESD D+ M LFD
Sbjct: 301 AKEEEKKEEPEEESDGDLGMSLFD 319

[Close]

BLAST of Clc03G00870 vs. ExPASy Swiss-Prot
Match: Q42112 (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 SV=2)

HSP 1 Score: 467.2 bits (1201), Expect = 1.5e-130
Identity = 246/323 (76.16%), Postives = 283/323 (87.62%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE TGNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+  +  A++GG   A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 300

Query: 302 AKEEKKEEPEEESDEDMIMGLFD 325
           AK E+KEE +EE D     GLFD
Sbjct: 301 AKVEEKEESDEE-DYGGDFGLFD 318

[Close]

BLAST of Clc03G00870 vs. ExPASy Swiss-Prot
Match: O04204 (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 7.3e-130
Identity = 245/323 (75.85%), Postives = 277/323 (85.76%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD KLC+LL EYSQ+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++KTGN A ++LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+V SVY+NGSVF+PEVL+LTE+DL+EKF AGVSM+ ++SLA+S+PT+A A
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN LAVA+ATEYSFPQA+ +KEFLKDP+KFA A A     ESGGA  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLF 324
                 +EE  EESD DM   LF
Sbjct: 301 ------EEEAAEESDGDMGFDLF 316

[Close]

BLAST of Clc03G00870 vs. ExPASy TrEMBL
Match: A0A6J1DCV2 (60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111018938 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.1e-156
Identity = 297/324 (91.67%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKK+ YDQKLCRLL EYSQVLIVGADNVGSNQLQ+IR+GLRGDSIVLMGKNT
Sbjct: 1   MVLKPTRAQKKSQYDQKLCRLLGEYSQVLIVGADNVGSNQLQNIRQGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTA M+L+PHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVMSLVPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DLLEKFL GVSMVAS+SLA+SFPTLA A
Sbjct: 181 LGIRPFSYGLLVLSVYDNGSVFSPEVLDLTEDDLLEKFLTGVSMVASVSLALSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALAVAVATEYSFPQA+E+KEFLKDPSKFAA AAP+A AESGGA  AAAAP
Sbjct: 241 PHMLINAYKNALAVAVATEYSFPQAEEVKEFLKDPSKFAAVAAPAAAAESGGAAPAAAAP 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
           AAKEE KEEP EESDEDMIMGLFD
Sbjct: 301 AAKEE-KEEPAEESDEDMIMGLFD 323

[Close]

BLAST of Clc03G00870 vs. ExPASy TrEMBL
Match: A0A6J1HJ11 (60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111464893 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.5e-154
Identity = 297/324 (91.67%), Postives = 310/324 (95.68%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MV+KPTRAQKKT YD+KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVVKPTRAQKKTQYDKKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+A MNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP+A  ESGGA SAAAAP
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESGGA-SAAAAP 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
            A+EEK  EPEEESD DMIMGLFD
Sbjct: 301 -AEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of Clc03G00870 vs. ExPASy TrEMBL
Match: A0A6J1I3W8 (60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111469430 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 295/324 (91.05%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT YD KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTQYDNKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+A MNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP+A  ESGGA +AAA  
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESGGAPAAAA-- 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLFD 325
            A+EEK  EPEEESD DMIMGLFD
Sbjct: 301 PAEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of Clc03G00870 vs. ExPASy TrEMBL
Match: A0A1S3C6N6 (60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103497088 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.9e-153
Identity = 296/325 (91.08%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTA  NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVF P VLDLTEEDLLEKFLAGVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP+A A+     S  AAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAK-----SVVAAP 300

Query: 301 AAKEEKKEEPEEESD-EDMIMGLFD 325
           AA E+KKEEPEEESD EDMIMGLFD
Sbjct: 301 AAMEDKKEEPEEESDEEDMIMGLFD 320

[Close]

BLAST of Clc03G00870 vs. ExPASy TrEMBL
Match: A0A5D3BFC6 (60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001270 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.9e-153
Identity = 296/325 (91.08%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTA  NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVF P VLDLTEEDLLEKFLAGVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP+A A+     S  AAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAK-----SVVAAP 300

Query: 301 AAKEEKKEEPEEESD-EDMIMGLFD 325
           AA E+KKEEPEEESD EDMIMGLFD
Sbjct: 301 AAMEDKKEEPEEESDEEDMIMGLFD 320

[Close]

BLAST of Clc03G00870 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 469.2 bits (1206), Expect = 2.8e-132
Identity = 247/323 (76.47%), Postives = 286/323 (88.54%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE +GNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVAT+Y+FPQA+++KEFLKDPSKF  AAA +  A++GG ++ A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AKEEKKEEPEEESDEDMIMGLFD 325
             EEKKEE +EE D +   GLFD
Sbjct: 301 KVEEKKEESDEE-DYEGGFGLFD 321

[Close]

BLAST of Clc03G00870 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 467.2 bits (1201), Expect = 1.0e-131
Identity = 246/323 (76.16%), Postives = 283/323 (87.62%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE TGNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+  +  A++GG   A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 300

Query: 302 AKEEKKEEPEEESDEDMIMGLFD 325
           AK E+KEE +EE D     GLFD
Sbjct: 301 AKVEEKEESDEE-DYGGDFGLFD 318

[Close]

BLAST of Clc03G00870 vs. TAIR 10
Match: AT2G40010.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 464.9 bits (1195), Expect = 5.2e-131
Identity = 245/323 (75.85%), Postives = 277/323 (85.76%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD KLC+LL EYSQ+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++KTGN A ++LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+V SVY+NGSVF+PEVL+LTE+DL+EKF AGVSM+ ++SLA+S+PT+A A
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN LAVA+ATEYSFPQA+ +KEFLKDP+KFA A A     ESGGA  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 AAKEEKKEEPEEESDEDMIMGLF 324
                 +EE  EESD DM   LF
Sbjct: 301 ------EEEAAEESDGDMGFDLF 316

[Close]

BLAST of Clc03G00870 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 394.4 bits (1012), Expect = 8.6e-110
Identity = 217/323 (67.18%), Postives = 252/323 (78.02%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+                               
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILV------------------------------- 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
             RS+RIHSE TGNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  --RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+  +  A++GG   A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 285

Query: 302 AKEEKKEEPEEESDEDMIMGLFD 325
           AK E+KEE +EE D     GLFD
Sbjct: 301 AKVEEKEESDEE-DYGGDFGLFD 285

The following BLAST results are available for this feature:

BLAST of Clc03G00870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895318.1	3.8e-160	94.75	60S acidic ribosomal protein P0-like [Benincasa hispida]	[more]
XP_022150896.1	1.7e-155	91.67	60S acidic ribosomal protein P0-like [Momordica charantia]	[more]
XP_022964942.1	1.6e-153	91.67	60S acidic ribosomal protein P0-like [Cucurbita moschata] >XP_023520060.1 60S ac...	[more]
XP_022970458.1	2.7e-153	91.05	60S acidic ribosomal protein P0-like [Cucurbita maxima]	[more]
XP_008457380.1	5.9e-153	91.08	PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo] >XP_016902088.1 P...	[more]

BLAST of Clc03G00870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50346	2.3e-136	78.40	60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P57691	3.9e-131	76.47	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ...	[more]
P41095	1.1e-130	75.00	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP...	[more]
Q42112	1.5e-130	76.16	60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 ...	[more]
O04204	7.3e-130	75.85	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ...	[more]

BLAST of Clc03G00870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCV2	8.1e-156	91.67	60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111018938 P...	[more]
A0A6J1HJ11	7.5e-154	91.67	60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111464893 PE...	[more]
A0A6J1I3W8	1.3e-153	91.05	60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111469430 PE=3...	[more]
A0A1S3C6N6	2.9e-153	91.08	60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103497088 PE=3 SV=...	[more]
A0A5D3BFC6	2.9e-153	91.08	60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Clc03G00870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11250.1	2.8e-132	76.47	Ribosomal protein L10 family protein	[more]
AT3G09200.1	1.0e-131	76.16	Ribosomal protein L10 family protein	[more]
AT2G40010.1	5.2e-131	75.85	Ribosomal protein L10 family protein	[more]
AT3G09200.2	8.6e-110	67.18	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 114..183 e-value: 4.3E-20 score: 71.5
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 9..108 e-value: 2.0E-19 score: 69.6
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 114..185 e-value: 4.8E-33 score: 114.7
IPR030670	60S acidic ribosomal protein P0	PIRSF	PIRSF039087	L10E	coord: 2..324 e-value: 5.7E-134 score: 442.6
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 6..209 e-value: 1.2E-46 score: 159.9
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 9..134
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 235..323 e-value: 6.2E-18 score: 65.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..324
None	No IPR available	PANTHER	PTHR45699:SF13	60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE	coord: 1..324
None	No IPR available	PANTHER	PTHR45699	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 1..324
None	No IPR available	CDD	cd05795	Ribosomal_P0_L10e	coord: 9..185 e-value: 5.95802E-89 score: 261.739

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G00870.1	Clc03G00870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome