Cla97C11G223930 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G223930
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr11: 29707375 .. 29710050 (-)
RNA-Seq Expression	Cla97C11G223930
Synteny	Cla97C11G223930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAGGGTAAGTTTAGGGTGTTTTGGAATGAATTAGGCAATTTTTGAGTTCATTTGAGGCTTTTTGTATTTTTTGTTAGAAAATGCTCAAATGTGATCCATTGAGCTCTGTACCCCATCAACACAATATGTAGCTCACTGTTTGTTGTACTTTACCCATGAGAATGAGTCGTAGAGTGAGATTTACCTTGAAAAAGGTTGAATCCATCCAAAATGGCACCTTAGTTTTGTAGGCTTGATTCAAAGATCATTTGTATCATTTTCCCAACTTATTCTTGTAGTTCTTTGACGTTTTCTTATTTAGTTTCTAGCAATTCTTTATTTGCTACATTGCAACCCATGGAATTTAACTTAATGAAATATGTTCATTCTAATTTACTTATGAGCTAAGTTATTTAAGGGATTAAGTCAGGTGGATACCCTAAGGATGACATGACTTAAGCCAATGCAACTGCATCACGTTACATTCATGCTTTCTGTTTCTTTTGTTGAATGATCGTTATCTTGCTAGGATAAATTGGTCATTTAAGTTAGCATGCCAGTGGGGTCTTAATACTAATAGGGTTAAGATATAAGTGGAACTCACAAAAGAATATGCCACTAAAAGCCTAGACAAAGATTGTCATGTACTTGTCCTTAGACATCAGGCACGTCATAAGGCTAAGAAATTGCATGACTTCATCTAGGATTTAATGAACTATAGAAATATAAGACAATATACTTAGGCTTCTAAAGGCACTTGTAAAATAAGATTGAACGAGAGTTGTTCTTGGTTCATAGGATAATGATGAGATTATGATGCTATTGCATAACCTAAGGTATCTTATCTATGGGTTGAAGCTTGACCTATAATCCTTATTTCTTATTACTGCTTACCTTTAATATTTGCAAGTAATCCCAAAATCCACTTATTTTCTAGTTACCCCTTAGTTTGTATTGAAAACTATGTGTGTTGAAATAATTGAATTGTTTTATAGTCTCCTATGAAACTTTCTTCCTTTTTATAAAGTATTTAAAGTTTGGTTTATTTTCACAAAATATAGTTCGTTGGATCTTGTGAATGCGGTGCTGCTTTCATAAAAAAAGATAATCTGTTCTATCCTAAGAGACAATTACTCATAAAACTCAGATACTCGAGTGAGTAAAATTATCTTGAGAAGACAACGTGAATTCGTTGGGCTCAAATTCTCTATTATATATATATATAAACAAAGATCTTGGACTAATAATTATATAAATTTAAACTTTGAATTTTCATATACAAGTGTATCAATTTACAATTTTCTTTTGATTTTGTTCGAAAAATATAGTGTGAGACTTACATTTATTTCAATTAAACTCCTAAGTTGTCATCATTGAGTCAGTTCATATTATTTATTGAGATTATCTTTGAAAACCGCTAATGCATCAAGTCTTATACATTTGTAGATTTCTTCAATGTTGGATAAACAATATAACATGGATGTACGAACAATTTTTAAAATAAATTCTAACTTAGAGTCTAAATTGATTTACTTAAGAAAACTTAGAGGTTTAACTGATAAAATTTTAAGTCTTACATATTTAGTTTTGGACTTTTATTGATACTATCAAAATGTTTAGAAATATAAATTGATATTTTCTTAAAATTTATGAAATTATAAACATAAAAACTGTAGTTTAATACATTTCTTCATGCCAACTTGAATATAACTCAATTGACCTTGTATATATTATCGATTCTTCGACCTAGAGGTTAAGATGCGGATCCTCCTATACATGTTGGACTTATATGACATTTATTCATAAAACGGTGCGTTTTACTCCAATCATCCATCCAATTTTCACAATTTCGTTTTTGTCCAAATCTCGGGGTCTCAGTTCGAAGTGTGAAGCCCGTACAAATTTTTCTTGTAGAATTATTGCAAAGTGCGATAAAGAAAGGAAAAAAAAAGAAAAGAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAGAGAGAAGAGCGAAGGGAAGTTCCATTAGAACCAACAAATTTTCTCTTTGATTTCGCGGCTCTCGCGAAGTCCCTCTCTGCAAATAACAGAGTACAAAGGAGGAAGAGATCTATGGTGTTATTGCTCAGAATAAATCAGTTCCTCCTAATGTTCTTTTGAATCGCATTCTTGGGTAAGTCTCTGAATCTCAATCTGTTAACAAATGGATTGAAATCGAATTTCGTAAATTGGACACCCCATTTTGAAGCCACTTCTTTGTTGTTGTTTCACTTTCGATGTTGACTTCTTTTTCCCTTCTCAGTGTTTCTCATTATGTTAGCCTGTCGCCATTGCGTATCTTAGTTCCTCCAACCCGTCATATGTCTTATGTTGACACCCACTTGCTTTACTTCGGGTTCAAGGGCTGCTGCGCATTATCTTATGTTTATATCAATTGTTCTTTTCATGAATTTGGATTCTGTTTCGTTGTCAAATCCATGGGTTTGGTTGGTATGGATAATTTTGTATTTCTTTGGTGTTCGCCAATGCTATTCCAGATTTGATATTTGAGGCTGCAGTTGGGATTGGTGAAGACAAACTTTGCTGGTGGATTTGAGGTTGTTGGTTGGATTATTTCTTCAAAAAATGAGGGAAATCTGGAGATGAGATGGTTGAGTTGGTCTTACATTGTGGTTTAG

mRNA sequence

ATGGTTCAGGAAGAAGAAGAAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAGAGAGAAGAGCGAAGGGAAGTTCCATTAGAACCAACAAATTTTCTCTTTGATTTCGCGGCTCTCGCGAAGTCCCTCTCTGCAAATAACAGAGTACAAAGGAGGAAGAGATCTATGTTGGGATTGGTGAAGACAAACTTTGCTGGTGGATTTGAGGTTGTTGGTTGGATTATTTCTTCAAAAAATGAGGGAAATCTGGAGATGAGATGGTTGAGTTGGTCTTACATTGTGGTTTAG

Coding sequence (CDS)

ATGGTTCAGGAAGAAGAAGAAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAGAGAGAAGAGCGAAGGGAAGTTCCATTAGAACCAACAAATTTTCTCTTTGATTTCGCGGCTCTCGCGAAGTCCCTCTCTGCAAATAACAGAGTACAAAGGAGGAAGAGATCTATGTTGGGATTGGTGAAGACAAACTTTGCTGGTGGATTTGAGGTTGTTGGTTGGATTATTTCTTCAAAAAATGAGGGAAATCTGGAGATGAGATGGTTGAGTTGGTCTTACATTGTGGTTTAG

Protein sequence

MVQEEEEEEEERKKERKREERREVPLEPTNFLFDFAALAKSLSANNRVQRRKRSMLGLVKTNFAGGFEVVGWIISSKNEGNLEMRWLSWSYIVV

Homology

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BLAST of Cla97C11G223930 vs. NCBI nr
Match: KAG7037413.1 (hypothetical protein SDJN02_01039, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 62.4 bits (150), Expect = 2.4e-06
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 54 SMLGLVKTNFAGGFEVVGWIISSKNEGNLEMRWLSWSYIVV 95
          S LGLVKTNF   F V GWI+ S+NEGNLE+RWLS S IVV
Sbjct: 46 SYLGLVKTNFGSEFGVAGWIVCSRNEGNLELRWLSLSQIVV 86

The following BLAST results are available for this feature:

BLAST of Cla97C11G223930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037413.1	2.4e-06	70.73	hypothetical protein SDJN02_01039, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cla97C11G223930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C11G223930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C11G223930 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G223930.1	Cla97C11G223930.1	mRNA