Cla97C01G006450.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C01G006450.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr01: 6403982 .. 6407154 (-)
Sequence length	396
RNA-Seq Expression	Cla97C01G006450.1
Synteny	Cla97C01G006450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGAGAGGGAGATCGAGAACAGAGGGAGACGAGGGAAGAGGGAGAGTTGCACAGACCGAGAGCAAAGGGAGATCGAGAGAAGAGGGAGAGTTACATAGACCGAGAGCAGCGTAAGGACCAAGGGCACGGGAGAGTCACTCGTGAGGGAGAGGAAAGCGGCAAACAAAATGAAGATTGAAAAAGATACAAAACCCTAATTTGAAATTTCATTTTCACTTATAATATATATATATATATATATATATATATGTATAAAATTAGTAATTCGGGTTGGGTTGGGTCAATCCGAATTTTGAAAATTTCAACCCGAGACACAACCCAACCCGAAAAAAACCAAATAAAATAACCCAACCCAACCCTTCTACTTCAGGTTGGGTAGTCCGGGTTGTTTAGGTTGTCGGGTTATTTGAACACCCCTAAGGAAACCTCCTTGGCTCCACACTGGGAAATGGCAAAACATTCTGCACCACGCTTTCGACCCTGTGACACCATGTCTTATGGGTGTGATATTTAAAGGCTAAATTATAAAAAATGCCTTTGAACTATGCACTTTGCGTAAAAAATGCCCATAAACTTTCAAAAATTTCAAAAATACCCTTAAACTTTCAGAAAGAAAGAGTTTAAAAATACTATTGTCCTTAGTTTTCGATGGAAACCGTTAAAATTTTGTTTCAAAAATACCCCTCAACTTTTCAAAAGTTTCAAAAATGCCCTTCACTAAAAAAAAGTTCAAAAATACCGTAAGTATATGAACATAAATCATTAATACCTCGTTGCAAAAATAACTTTAAAATTAAAAAAAAATAAAAAAATAAAAAAATAAAATTGCTCCAAACATTAATATTGTGATTAATTTATTTGAAGTTTTCTTAAGTTAGAAAAGAATTAATTTTAAAACAAATTATATAGATATATTCATTTTTTTATAGAGATACTCTTATTTTTCTCTTAATTTTTCAATTCTTAGCTTACACCAATTTTCCCACCAACCAAAATTTTAAGTTAAAACATAAAATATCACAAAATTCTAAAATCAAAATCTCCCCTTCAATATACCAAAACGACAAATAATCAATAATAAAAAATGTATTCGGTTATTAACACACACTCAACTACTAACATACGACTTTGTTAAAAGATTTATGTCCTAAATCCCTGATGATTCCTCTTTCTTCTTATTATAGTCCATATACCTTAACTGGAGTGTGCAATTTCACTCATTCATTTATTTTAGATAAACAAATGTCACACAATTAACAAAAAGGGAGAGTAAGAGGGTATTGAAGAAGGGAGGGGAGAAAAAAGATGGACAATAGAGAAGTAAAGCGACATTGACGGTTTTTATTCACACAACAGAAAGAGTATTTTTGAACTCATTTTGAAAGTTTAAGGGTATTTTTGAAACTTTTGAAAGTTAGAGATATTTTTGACACAAAGTATAAAGTTTAGGGGTATTTTGTATAATTTAGCCTATTTTAAAATTTTAAACTTAAAAAATATATGTGTTTAGTTTTATGAAAAATGAGACACTCAAAATTAAACAAAAATCATAAGGATCTCTATAGTAAAGAATTTGAAAACAAGGGATTCAATAAAAACAAAACTGTATTTCATGTTTTTAGATATGTGTTTGGTAGCAGATTATGGGCTCCTTTAGATTAACTTAAAAAATAGAGACAGTTGCAAATATAACAATCAGGATCAAAGTATTTATAGATATAATATAATGCAAAAAAAAAAAAAATGCAAATATAGCAAAATTTAGATTTTTCTTTCAAAGTCTATTAGCAATTGATCATATTAATAACGGGGTCTATCAATGATATACCATAATACTGATAGAGTCTATCATTGATAAGTTTTGTTATATTTGTAATTTTTAAAAAATGTTGCTGCACAACTAATTATTATCGCTAAAAGTGTTATCCAATGCAATTATTCGAAAATAAATGTTTCCAAAAATTCATTTTCATTTAAACATTTTTATAAGAACTGTTTGAAATAAATACACTAATGGGTTTCAAAATCAATTTTGAGTGGTTGTCAAACATGTATCTTTCTTTTTAAATGACTTGTTTTTTTTAATTAAATATTTGAAAAAGTATTCCAAACACACTCAAAGAAATTGAATTTTAATTTAATCAGTACTTTAAAATGTGTGATGATTATTTTGTAGTATTATATAACCTATAATGTAGTACATAATACATCTTCTATTTTTTTAAAAATTAATTGAATTTAAAACATGATTATATTTTTAAATTTTTTATTTTTATTTAATATAATTTTATATTTTAAAATTTAAAATTCAAAATCTGTAGGGTGAAAACATATAAAAGTTGTTTTTAGAATTTACGCTACAAAATTTGGAAACGATTTTTAACCAAAATTCTTTACCAAATAACCCTTATTTTTTTCATTTTAATTTGAAGCATTTTTCTTTTTAAAATAAAACCTACAACCAAATCTTCATCTTCTTCTCTTCCCCTCCCTCTCATTGTCGTGAAAAGAGGCCAGCCGCAGCTCCTCCCCTTTTCGTTTCAGTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGGGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAGTTTTGGTAACTACCCATTCTATTTCCACCAAATATTTGAGTTACTCGCTTCTTAACTGCTTAAATAGGTAGGATTAAGCGTATTCGGACATGTTTCCTTTAGGATTCAAGTCCATTTGGATAAGTTTCAGTGGGTAGAACACTCTAAATATCCTTTCTAACTACTTTAAGGTTCTTTTAAGTTTGTCTCTAATATTTGTAATACTTGAAAGCTCGTATTTGTAGATCTGGAGTATTTTTGGAACTATCTGAACACTTTTTAGTGAGGACCCAAGATGTTTTTGTGAGTTTTAGCCATTAGAACTCTATTTAGATCCTTTTGGAATTAAATTAAAGTGCCGTAAATTAGTTTATAACTTTGGATATTCTCTATTTCTAGTTTAGACTCAGATTTGAGGCTTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGGTAAGTGGAATTCTACTTGA

mRNA sequence

ATGAGAGGAGAGGGAGATCGAGAACAGAGGGAGACGAGGGAAGAGGGAGAGTTGCACAGACCGAGAGCAAAGGGAGATCGAGAGAAGAGGGAGAGTTACATAGACCGAGAGCAGCGTAAGGACCAAGGGCACGGGAGAGTCACTCTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGGGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAGTTTTGTTTAGACTCAGATTTGAGGCTTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGGTAAGTGGAATTCTACTTGA

Coding sequence (CDS)

ATGAGAGGAGAGGGAGATCGAGAACAGAGGGAGACGAGGGAAGAGGGAGAGTTGCACAGACCGAGAGCAAAGGGAGATCGAGAGAAGAGGGAGAGTTACATAGACCGAGAGCAGCGTAAGGACCAAGGGCACGGGAGAGTCACTCTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGGGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAGTTTTGTTTAGACTCAGATTTGAGGCTTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGGTAAGTGGAATTCTACTTGA

Protein sequence

MRGEGDREQRETREEGELHRPRAKGDREKRESYIDREQRKDQGHGRVTLPARPPSTETHNAFPFRRRAPPILRPTRIWRVKACESFARVLFRLRFEAFGLRLKVALGMNYDYSFSSTFETLNQVLGKWNST

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C01G006450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G006450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G006450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G006450.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C01G006450	Cla97C01G006450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C01G006450.1-exon	Cla97C01G006450.1-exon-Cla97Chr01:6403982..6404107	exon
Cla97C01G006450.1-exon	Cla97C01G006450.1-exon-Cla97Chr01:6404481..6404605	exon
Cla97C01G006450.1-exon	Cla97C01G006450.1-exon-Cla97Chr01:6407010..6407154	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C01G006450.1-cds	Cla97C01G006450.1-cds-Cla97Chr01:6403982..6404107	CDS
Cla97C01G006450.1-cds	Cla97C01G006450.1-cds-Cla97Chr01:6404481..6404605	CDS
Cla97C01G006450.1-cds	Cla97C01G006450.1-cds-Cla97Chr01:6407010..6407154	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C01G006450.1	Cla97C01G006450.1-protein	polypeptide