CmUC01G011560 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G011560
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	photosystem I subunit O
Location	CmU531Chr01: 19071955 .. 19075738 (-)
RNA-Seq Expression	CmUC01G011560
Synteny	CmUC01G011560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGAACATCCCACCACCACACACCACAAATAATTGTTTTTGTTTGATGAAAAATACTTTGATACATAAGTAGAAAACGGCCCACTTTATCCAAAAAATTCCGAGGTGTCAAAGCTTGATTCATCAGAAATTGATTCACTATCCAAAGCAATCAAATCCACAATCCCCAAAATCTCATCCACACAAATTTCCCAACAAAATCCCAACCTCTTTCCCTCACTTCTACAAAACAACCGCACCACCCAAGCTCTGATCCGCACCAATCCTCTCAAAAAATGGCCACCGCCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGTAATCCACCGCTACCTCCAATCAACCCATCTCCAACTTTCTGCTGCACATCTGTAATTGATTTTGGGCATTTTTCTTGTCTTCCCAGGGTTCGTCAGGTCACCGCTCGCCGCCAGGAATCCTCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGGTATGTGATTAGTGATTGTCCGATTTGGAGAATGATTGGTTGTTTGTTGTGATTTTGATTTTGTGTGGGGGAATGAAGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGCACTGATCGGGTGGATTGCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTAAATTACATTTCCCGCTAACTTCTTTTTTTTTTAACAAAAAAGAATTAATTTAATTTTAGTATTTAGGCCATTTCATATTTATTTGATTTTTTATTTTCGAAATTTAAAAAACGAGTGAAATTAAAAGAACAAAGTAGTTTTTGGTTTTTACATTTTAATTAAGAATTCAAATATTTCTTTTAAATAGGAGGGATTATGGTAAAAGATTTGGGAAGAAATAAATATGAACTTCTAAAATAAAAAATTAAAATTGAAATGGTATCTAATGAGGTCTTATTTATTTGATTTGGATTTGAATCTCCAATTTCAAAATTCAAATGAAAATATGTCAATTATTATTTGCGCTATAATTGCTTGCATTCAAATTTTGCTTGGATTTGTACTCATTCTACTCTAAACTCTTTATAGATTATTATTTTTTCTAATTAAAAATGAGTATGATATAGTTAAAAAATGTAGGAGAAACATGAAGCACTTTAAAATTGTAGTAATAACATGATGCACGTTTGTAACTAAAACTATATAAACTCTTTATTAAATAATTAAATATCAATCAATAATAATGACGAACTTAAATATTTTGGACAAATATGAATTTATGTCTTCAAATTTTGGGAGTTGTATTAATTAAAATTTTGAACTCATAACTTTATCAATTTAAATCATGAACTTTCTTAAGTGTATCAATAAGTCTTTCTGTAGATTTCATTGGATTAATATTGTGGAAACTTATGATTTGAGCCAATTAAACCCTCAATTTTCATTACTAAATTAATTTAGATATGTCATTACAATTACGTTTGAAAATCATATATGCATTGATTCTTAAACGCGTGTACACTTCTTCAAATGTCGATTTTACAAAACGAACAATATTATAGTAAATGCATGAATGATTATCAAAGAAAATTTTGACCAAGAGTCTAAATTGGTCAATTTATGAAAGTTTAGGGGTTTAATTAATATAATTATGAGTTTCACACAAGATTTTTTAAAATGGAACGTAATGGAAGGTGTAAATTGATACACGTACAAAAGTTAAAAGTTTATATTAATACTTTCACCAATAAATTTTTTATAACTATTTGACTTTTGTTTTGTCATTCACCTTCACCAATGTTTTTGAAAATCAAACCAACATTTAAAAATAAAAAAAATGTAGTTTTTAAAAATTTATTTTTATTTTAGAATTTGACTAAGAATTAAAGTGTTTCTTTAAGAAATTTACCTACCCAAAATGGAATATATGAGAAATTAAACATAATTTCAAAAATAAAAAATAAAAAATTAAATTGTTACTTATTGAGGCTGTAGTTATTAAATTTTTATTTTATTATTATTATTTTTTTGTTGAAATTTGGTTAAAAGACCTAATGTTTACCTTGGGAAGAGGAAAACCATGATTAAAGAATGGTGAGAAAACACAAAACCAAAAAGTTAAATAGTTATTCAAGTAAGCCTTAAATTTTTTAAAAATCTTTAGAAATTATTTAGAAGTAAGAATTATTTAAGGTTGAATTACCATGTTCATCCTTTACTGTTGAATTTGAGTTTTTCTATATTCAAATATTTAATTTCAGTTTTTTAGTCTCAATATATCTTAAATTTAGTCACCACCATTAGTTTATGGTTGGTTTTTTATAAAACTTTTGTTATCTATTATCATTTTTCTATAAATTTTAAAAACATATTTATATATTATATTTATTTGTATGAAAATTATTATTATTATATAACCAATTTTAATGAAAATTAACTCCGAAGAACAAAGTTCAAAGTTTATTAAAAATACAGACTAAAATTGAATCCAACCTGGAACAACGACCAAAATGATATTTTAATTACAATGATTGAAATAAAATTAAAATGTGTGTATTTCAGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAGTGAAAATGTAATAATTCTTAAAAAGGAGAGGGAATTCTAGTATTTATTATTCATGTTTATAAGTTATAAGTAGTGTTTGTGGCCATCATTTTCTTCATGTAAATCGCAACCTCCAAATCTTGGTATAACCTTGTGTTTATTAATGAAATGCCGCCTCGCTAATCCTACTCAACTCAGTTGTTTGAACTATTAAGTTCAAAGGAAAAGTGATAAGTAACACTCGAGGACATGTGATATGAACGGAGGAACCTTAAACATGCAATATGAACATAAACAATGAGCCATACATGCTGTCCAAGTTTACACTAGGCAAAGAAGAAGAATTATATGAAGTCAAGTGGAATTTATGAAGAATGAAGCTTCATTTAATGAACAAAGACTTCAAGCTACTTCAAATGGGATGTCATTTACTCTTAGATGGTTACAAATGCATGAAATATGGTTAAAAAATATTAATCTCGGATTTATTGTATTTATTAAATGTATTTTTCAGTTTTGAGTCATTTTATGTGATTTTATGTTACAATTTCATCATGGCTTATAATGGTCATTAATTATGAGTGTTATAACTCTTTGAATGCCTCATAGAATGTTTAAGGTTAGATTTTGAGACCTATATAATCCCATGTAATTATTCAAAAATGAGAGATGGAAGAGATTTGAAAATGTAGTAAAAGAGCCTTTGAGCTAGAAACCTTGTGCTATGTTTCTTTTGCGATTCTATGGTGTTTAGGTTGCATGTCCAAAACCATGCAAACTTGACTTGATCGATCTTGTTTGTGGAGTGATTCGAAGATCAAGGATCAATGGAAGCATGAATTTTTGTTCGATCCGTGGTTTTGTTGATCGTCTAAGTAATGACCATTATAAGTAACACTCGAGGACTCTGATACCAAATAATAAGTAACACTCAATGACTTAGATTTAACAACCTTGACGACAAACAAGACTTTTAGATCTCAAACTCAAACACTTGAAATTAAGATGATCTCAGCCCCTAGGAATGACTAGATGACG

mRNA sequence

ATCTGAACATCCCACCACCACACACCACAAATAATTGTTTTTGTTTGATGAAAAATACTTTGATACATAAGTAGAAAACGGCCCACTTTATCCAAAAAATTCCGAGGTGTCAAAGCTTGATTCATCAGAAATTGATTCACTATCCAAAGCAATCAAATCCACAATCCCCAAAATCTCATCCACACAAATTTCCCAACAAAATCCCAACCTCTTTCCCTCACTTCTACAAAACAACCGCACCACCCAAGCTCTGATCCGCACCAATCCTCTCAAAAAATGGCCACCGCCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGGTCACCGCTCGCCGCCAGGAATCCTCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGCACTGATCGGGTGGATTGCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAGTGAAAATGTAATAATTCTTAAAAAGGAGAGGGAATTCTAGTATTTATTATTCATGTTTATAAGTTATAAGTAGTGTTTGTGGCCATCATTTTCTTCATGTAAATCGCAACCTCCAAATCTTGGTATAACCTTGTGTTTATTAATGAAATGCCGCCTCGCTAATCCTACTCAACTCAGTTGTTTGAACTATTAAGTTCAAAGGAAAAGTGATAAGTAACACTCGAGGACATGTGATATGAACGGAGGAACCTTAAACATGCAATATGAACATAAACAATGAGCCATACATGCTGTCCAAGTTTACACTAGGCAAAGAAGAAGAATTATATGAAGTCAAGTGGAATTTATGAAGAATGAAGCTTCATTTAATGAACAAAGACTTCAAGCTACTTCAAATGGGATGTCATTTACTCTTAGATGGTTACAAATGCATGAAATATGGTTAAAAAATATTAATCTCGGATTTATTGTATTTATTAAATGTATTTTTCAGTTTTGAGTCATTTTATGTGATTTTATGTTACAATTTCATCATGGCTTATAATGGTCATTAATTATGAGTGTTATAACTCTTTGAATGCCTCATAGAATGTTTAAGGTTAGATTTTGAGACCTATATAATCCCATGTAATTATTCAAAAATGAGAGATGGAAGAGATTTGAAAATGTAGTAAAAGAGCCTTTGAGCTAGAAACCTTGTGCTATGTTTCTTTTGCGATTCTATGGTGTTTAGGTTGCATGTCCAAAACCATGCAAACTTGACTTGATCGATCTTGTTTGTGGAGTGATTCGAAGATCAAGGATCAATGGAAGCATGAATTTTTGTTCGATCCGTGGTTTTGTTGATCGTCTAAGTAATGACCATTATAAGTAACACTCGAGGACTCTGATACCAAATAATAAGTAACACTCAATGACTTAGATTTAACAACCTTGACGACAAACAAGACTTTTAGATCTCAAACTCAAACACTTGAAATTAAGATGATCTCAGCCCCTAGGAATGACTAGATGACG

Coding sequence (CDS)

ATGGCCACCGCCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGGTCACCGCTCGCCGCCAGGAATCCTCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGCACTGATCGGGTGGATTGCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAGTGA

Protein sequence

MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

Homology

[Close]

BLAST of CmUC01G011560 vs. NCBI nr
Match: XP_038895620.1 (photosystem I subunit O [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 5.2e-72
Identity = 138/147 (93.88%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MATAFATSSSVVGLGT+SLSSPSSR+PRLVSGFV+ P+ ARNP AVARASGGRFTCFERD
Sbjct: 1   MATAFATSSSVVGLGTASLSSPSSRSPRLVSGFVKLPVTARNPFAVARASGGRFTCFERD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 147

[Close]

BLAST of CmUC01G011560 vs. NCBI nr
Match: XP_022142590.1 (photosystem I subunit O [Momordica charantia])

HSP 1 Score: 271.9 bits (694), Expect = 3.1e-69
Identity = 134/148 (90.54%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MATAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFER 60
           MATAFATSS++VGLG +SSLSSPSSR+PRL S FV+SP AARNPL+VARASGGRFTCFER
Sbjct: 1   MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPAAARNPLSVARASGGRFTCFER 60

Query: 61  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120
           DWLRRDLNVIGF LIGW+APSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL
Sbjct: 61  DWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120

Query: 121 ITWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           +TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 VTWHLGLFITLTFGQIGFKGRTEDYFSK 148

[Close]

BLAST of CmUC01G011560 vs. NCBI nr
Match: XP_008463649.1 (PREDICTED: photosystem I subunit O [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 9.2e-69
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MATAFAT SSV GLGT+SLSSPSSR+PRLVSGF++SP+AARNPL V RAS GRFTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVINGKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmUC01G011560 vs. NCBI nr
Match: XP_004139499.1 (photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical protein Csa_022779 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MATAFAT SSV GLGT+SLSSPSSR+PRLVSGF++ P+AARNPL+VA ASGG+FTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmUC01G011560 vs. NCBI nr
Match: XP_022973174.1 (photosystem I subunit O [Cucurbita maxima])

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA+AFATSSSVVGLG+SSLSSPSSR+PRLVSGF++ P+ ARNP  VAR+ GGRFTCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of CmUC01G011560 vs. ExPASy Swiss-Prot
Match: Q949Q5 (Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.9e-57
Identity = 106/145 (73.10%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA  FAT S+V+GLG SS++     T    S F++  L+A+NPL +A ASGGR TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSIT-----TKPFSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GF LIGW+APSSIP INGKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYF 146
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of CmUC01G011560 vs. ExPASy TrEMBL
Match: A0A6J1CLD0 (photosystem I subunit O OS=Momordica charantia OX=3673 GN=LOC111012668 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 134/148 (90.54%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MATAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFER 60
           MATAFATSS++VGLG +SSLSSPSSR+PRL S FV+SP AARNPL+VARASGGRFTCFER
Sbjct: 1   MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPAAARNPLSVARASGGRFTCFER 60

Query: 61  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120
           DWLRRDLNVIGF LIGW+APSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL
Sbjct: 61  DWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120

Query: 121 ITWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           +TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 VTWHLGLFITLTFGQIGFKGRTEDYFSK 148

[Close]

BLAST of CmUC01G011560 vs. ExPASy TrEMBL
Match: A0A1S3CJR4 (photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.4e-69
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MATAFAT SSV GLGT+SLSSPSSR+PRLVSGF++SP+AARNPL V RAS GRFTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVINGKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmUC01G011560 vs. ExPASy TrEMBL
Match: A0A0A0LT61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.8e-69
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MATAFAT SSV GLGT+SLSSPSSR+PRLVSGF++ P+AARNPL+VA ASGG+FTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of CmUC01G011560 vs. ExPASy TrEMBL
Match: A0A6J1IDS7 (photosystem I subunit O OS=Cucurbita maxima OX=3661 GN=LOC111471677 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.6e-69
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA+AFATSSSVVGLG+SSLSSPSSR+PRLVSGF++ P+ ARNP  VAR+ GGRFTCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of CmUC01G011560 vs. ExPASy TrEMBL
Match: A0A6J1EID2 (photosystem I subunit O OS=Cucurbita moschata OX=3662 GN=LOC111434359 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 127/147 (86.39%), Postives = 135/147 (91.84%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA+AFATSSSVVGLG+SSLSSPSSR+PRLVS FV+ P+ ARNP  V R+ GGR TCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of CmUC01G011560 vs. TAIR 10
Match: AT1G08380.1 (photosystem I subunit O )

HSP 1 Score: 221.9 bits (564), Expect = 3.5e-58
Identity = 106/145 (73.10%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MATAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA  FAT S+V+GLG SS++     T    S F++  L+A+NPL +A ASGGR TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSIT-----TKPFSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GF LIGW+APSSIP INGKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYF 146
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

The following BLAST results are available for this feature:

BLAST of CmUC01G011560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895620.1	5.2e-72	93.88	photosystem I subunit O [Benincasa hispida]	[more]
XP_022142590.1	3.1e-69	90.54	photosystem I subunit O [Momordica charantia]	[more]
XP_008463649.1	9.2e-69	91.16	PREDICTED: photosystem I subunit O [Cucumis melo]	[more]
XP_004139499.1	1.2e-68	90.48	photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical protein Csa_0...	[more]
XP_022973174.1	1.6e-68	88.44	photosystem I subunit O [Cucurbita maxima]	[more]

BLAST of CmUC01G011560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949Q5	4.9e-57	73.10	Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1	[more]

BLAST of CmUC01G011560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLD0	1.5e-69	90.54	photosystem I subunit O OS=Momordica charantia OX=3673 GN=LOC111012668 PE=4 SV=1	[more]
A0A1S3CJR4	4.4e-69	91.16	photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1	[more]
A0A0A0LT61	5.8e-69	90.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1	[more]
A0A6J1IDS7	7.6e-69	88.44	photosystem I subunit O OS=Cucurbita maxima OX=3661 GN=LOC111471677 PE=4 SV=1	[more]
A0A6J1EID2	2.7e-66	86.39	photosystem I subunit O OS=Cucurbita moschata OX=3662 GN=LOC111434359 PE=4 SV=1	[more]

BLAST of CmUC01G011560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08380.1	3.5e-58	73.10	photosystem I subunit O	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017498	Photosystem I PsaO	TIGRFAM	TIGR03059	TIGR03059	coord: 67..145 e-value: 4.0E-38 score: 127.7
IPR017498	Photosystem I PsaO	PANTHER	PTHR36311	PHOTOSYSTEM I SUBUNIT O	coord: 1..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR36311:SF2	BNAC08G43200D PROTEIN	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G011560.1	CmUC01G011560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
molecular_function	GO:0003729	mRNA binding