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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGACAAATAAAGAGCCTGGCTATCTTCGTATCGAACTTCCCGGTGGGCCTCTGCTAGGCAATCGGAGTACTACTATTATTATATTATTCCACCAGGGCCTCCGCTGACACTTCCCCCGGCGGCTAGGCCCCTACTTTAGGCACAGGCTTTCTCGAAACAAAGGAGAATGAAAGCTAATATTTCACTGTTTTCGTTCCAAAAATCTCGAAAGACAGCTCGCTTGAAGAAAACTCTTTTAGAGCCTGGTACAAGCCAAGCCCCTTCGATTCGGCAACAAGAGTCGGTTATAGAATAGTCTTTTGGTCAGCTTTCCCGTTCTTGAAGACTTTCTGGCCGGTAGGCTTTATAGCGGACCTGCCTACATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATCCTTTACTCCGACAGCATCTAGGGTTCCTCGAACAATGTGATATCTCACACCGGGTAAATCCGATTTAATTGATTGAAAATTTCCTACCTCAAGATTATTATTTGAATAAAGTTTTGTAAAAAAAAAGGATTTATTACTTTTTATTATAATAAATAAATGTATATTCGGATTAACCCATCAATTAGATAGATCCAAAATAAAAATCTTTTTCACAAAAAAAGAAATAAAACAATAAAAATACATAATAACAATCCATATCAGCATTTTCTACCGAGTTTATTTAACTTAAGAGACTCAAATAATCTTTCCCTAAAATAAAGTGAAAAAGATGTATGAATTGTTACCTGGATTTACAATTATTCATTACAGACAAACACAAAATACGAAAAAATGTTGAAGGGTGATATAAAATTGGTCTATTTCCAGCATCATATCCATAGTTAGCGCATTCATCATAATTAGAAGCTCCAGCTCCGTATCAAGGTCACGGTCGATATCGTCACTATCATCAATATCGCCACTATCATCAATATCGTCACTATCATCAATAAGAAAACCCTCAGGCTTGTTATCCAGGAACGTGTTCAGAAATACTGTAATGAAAGGAAGATAGGAGTTTGTCGCTAGGTATTTGACCAAATAGGATCGTCCAGTTCCAGGTCCAATGCCATTCAGAAGCAGAAGCTGTGGGCTTCCGAGAGCCCCAGCACAGAGCATCACCTCTCCCTTTTCACGCACCATTGCATGGCCCTCTTTGGTCGCGAAAAACAACCCCAATTGCCGATTGCTTCGGTCCGAAGTTGTCGGAACGAATCGTTTGCTTTATCGAACAAAGCTTTATTAGGGGGTCTTGGTTGGCCCCCTATTTTCAACCATTACAGCTGGCGTCGACCAGCTTTGCGATACGGACGAACACAAAAAAGAACGCTGGCAGCAGAAATGCAAAAGAGAAGAGCAAAGATTCCAAATCCTATTTCTTAA mRNA sequence ATGACAAATAAAGAGCCTGGCTATCTTCGTATCGAACTTCCCGGTGGGCCTCTGCTAGGCAATCGGAACAGCTCGCTTGAAGAAAACTCTTTTAGAGCCTGGTACAAGCCAAGCCCCTTCGATTCGGCAACAAGAGTCGGTTATAGAATAGTCTTTTGGTCAGCTTTCCCGTTCTTGAAGACTTTCTGGCCGAAGCTCCAGCTCCGTATCAAGGTCACGGTCGATATCGTCACTATCATCAATATCGCCACTATCATCAATATCGTATTTGACCAAATAGGATCGTCCAGTTCCAGGTCCAATGCCATTCAGAAGCAGAAGCTGTGGGCTTCCGAGAGCCCCAGCACAGAGCATCACCTCTCCCTTTTCACGCACCATTGCATGGCCCTCTTTGGTCGCGAAAAACAACCCCAATTGCCGATTGCTTCGGTCCGAAGTTGTCGGAACGAATCGTTTGCTTTATCGAACAAAGCTTTATTAGGGGGTCTTGGTTGGCCCCCTATTTTCAACCATTACAGCTGGCGTCGACCAGCTTTGCGATACGGACGAACACAAAAAAGAACGCTGGCAGCAGAAATGCAAAAGAGAAGAGCAAAGATTCCAAATCCTATTTCTTAA Coding sequence (CDS) ATGACAAATAAAGAGCCTGGCTATCTTCGTATCGAACTTCCCGGTGGGCCTCTGCTAGGCAATCGGAACAGCTCGCTTGAAGAAAACTCTTTTAGAGCCTGGTACAAGCCAAGCCCCTTCGATTCGGCAACAAGAGTCGGTTATAGAATAGTCTTTTGGTCAGCTTTCCCGTTCTTGAAGACTTTCTGGCCGAAGCTCCAGCTCCGTATCAAGGTCACGGTCGATATCGTCACTATCATCAATATCGCCACTATCATCAATATCGTATTTGACCAAATAGGATCGTCCAGTTCCAGGTCCAATGCCATTCAGAAGCAGAAGCTGTGGGCTTCCGAGAGCCCCAGCACAGAGCATCACCTCTCCCTTTTCACGCACCATTGCATGGCCCTCTTTGGTCGCGAAAAACAACCCCAATTGCCGATTGCTTCGGTCCGAAGTTGTCGGAACGAATCGTTTGCTTTATCGAACAAAGCTTTATTAGGGGGTCTTGGTTGGCCCCCTATTTTCAACCATTACAGCTGGCGTCGACCAGCTTTGCGATACGGACGAACACAAAAAAGAACGCTGGCAGCAGAAATGCAAAAGAGAAGAGCAAAGATTCCAAATCCTATTTCTTAA Protein sequence MTNKEPGYLRIELPGGPLLGNRNSSLEENSFRAWYKPSPFDSATRVGYRIVFWSAFPFLKTFWPKLQLRIKVTVDIVTIINIATIINIVFDQIGSSSSRSNAIQKQKLWASESPSTEHHLSLFTHHCMALFGREKQPQLPIASVRSCRNESFALSNKALLGGLGWPPIFNHYSWRRPALRYGRTQKRTLAAEMQKRRAKIPNPIS
Homology
BLAST of CmUC11G211480 vs. NCBI nr
Match: KAG6583631.1 (hypothetical protein SDJN03_19563, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11 Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0 Query: 22 RNSSL-EENSFRAWYKPSPFDSATRVGYRIVFWSAFPFLKTFWP 65 ++SSL EENSFRAWYKPSPFD ATRVGYRIVFWS FPF + FWP Sbjct: 99 KDSSLEEENSFRAWYKPSPFDLATRVGYRIVFWSTFPFFQAFWP 142
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6583631.1 | 1.1e-11 | 81.82 | hypothetical protein SDJN03_19563, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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