Lsi09G000930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G000930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	short-chain dehydrogenase TIC 32, chloroplastic-like
Location	chr09: 828349 .. 830112 (+)
RNA-Seq Expression	Lsi09G000930
Synteny	Lsi09G000930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATCCTTAGAATTTCTGTCAATTAAAAAAAGTTCCTAAAACGAAGCGAGAAGCGATTCCCACTTGGCGAGTGGCCGTGAAGATTGATCAGATAGAAGAGAGAGGAAGGAATGTGGTTTCTTAGCAAGAAAGGGGCATCTGGGTTCTCAGCTTCTTCCACAGCTGAAGAAGTTACAGAAGGAATCGATGGGACAGGTCTCACAGCCATTGTTACAGGTCATTTTCCAATCTCCACAATAGCATGAATTTGGTTTAATCAATGACGTGCTTCTTTTCTCTATTGTCGAATTGATTGAACAAATTGCCCCGTTTCTTGTGAATTTTTGTTGCTGTTACTTATTTAAGTTGCGTATCAGATTTCAAACAAAAGAAATATGGAGATAAGGCGTGGCTGTTGCTCTCTATTTCGTCTTCCTCTGATAATTTTTCCTGAAGCTTTCAGAGATTAAGGCCATCGTTTAGCTTAGAGCTTGTTTATGGGTTATTGGGTTTCATTCCTTTGTATATGGGTTATTGGGTTTCATTCCTTTTAATGGGAGTTACTGTGTTTGAATGTATCATTGATTGAAAAAATAATATGCCCGATTGGCCAAATGTTTCCACAGCTTTGTATTTTACAATGTTTTGCTTTGTTGGTTCACCAAATTATATACTCACTGATCAAAAAGTAGATTGACCAAATTATATACTCACTGATCAAAAAGTAAATTAATGGGTAGACAATGAGCATAATGCTGAGGGATGTGATTAATCTTCTCTTTTGGAGTTGCCTTTGGTGTTTGATGAAAATTAAGTTTCACTTTTGAAGGAGCCTGAATTTTCTCATCATAGGGTCTTCTGCATTAACACAGGCGCATCAAGTGGCATTGGTACTGAAACCGCTCGTGTCCTTGCGTTGCGCGGAGTACATGTAGTAATGGCGGTTAGGAATGTAGTAACTGGTAGGGAGGTCCAAGAAGCCATTGTCAAGGAAAACCCAACTGCCAAAGTTGATACCATGGAGTTGGACCTGAGCTCAATGGCATCTGTTCAGAATTTTGCATCAAATTTCAAGTCCTCAGGTCTTCCACTGAACATTCTCGTGTAAGATGGCAAACTGTATGACTTAATAATATGGATTCTTTGTTACATTTGCAATCTGAATATATGGATCTTCTCATTCCTTCATCTAGCTTATGATTTTCATGTAGCATTCAGACCAAATGACACTCTGAAACTACATCAATTTCGATATTATTAAATAATGAGTGATGCAAGAGACATCTCTATATTTTCCAAATATTAATCATGAGTCATGGCTAACATTAGTATAATTAGTAGCAAAAAGAGGAGAAAATTGAACAATTACACCATTAGTACTTATCTTTTCTTCGTTCAGTAATAATGCAGGAGTCATGGCTTCCCCTTTCTTGCTCTCGAAGGACAAGATAGAATTGCAATTTGCAACAAACCATGTGGGTAAGTACATCACCAATAGAGAAGGACTGATTGTTGCTCTCTTTTGTAGTGGATGATAGGAAATCGACGGTCTAGTCATTCTTGTCCCATGGTGCCCTAATACTTGATTGTTCTCTCTGCAGGACATTTTCTTTTGACAAATCTTTTGTTAGAGACATTGAAAAAGACAGCAAAAGAAAGTAACAAAGAAGGAAGGATTGTCAATGTCTCATCACGACGGCACCAATTTTCATATCGTGAAGGCATCCGATTTGACAAAATCAATGATCGATCAAGGTCTTCTTTCTATCACCCTTTGCTATAA

mRNA sequence

TTTAATCCTTAGAATTTCTGTCAATTAAAAAAAGTTCCTAAAACGAAGCGAGAAGCGATTCCCACTTGGCGAGTGGCCGTGAAGATTGATCAGATAGAAGAGAGAGGAAGGAATGTGGTTTCTTAGCAAGAAAGGGGCATCTGGGTTCTCAGCTTCTTCCACAGCTGAAGAAGTTACAGAAGGAATCGATGGGACAGGTCTCACAGCCATTGTTACAGTTTCACTTTTGAAGGAGCCTGAATTTTCTCATCATAGGGTCTTCTGCATTAACACAGGCGCATCAAGTGGCATTGGTACTGAAACCGCTCGTGTCCTTGCGTTGCGCGGAGTACATGTAGTAATGGCGGTTAGGAATGTAGTAACTGGTAGGGAGGTCCAAGAAGCCATTGTCAAGGAAAACCCAACTGCCAAAGTTGATACCATGGAGTTGGACCTGAGCTCAATGGCATCTGTTCAGAATTTTGCATCAAATTTCAAGTCCTCAGGTCTTCCACTGAACATTCTCGTTAATAATGCAGGAGTCATGGCTTCCCCTTTCTTGCTCTCGAAGGACAAGATAGAATTGCAATTTGCAACAAACCATGTGGGACATTTTCTTTTGACAAATCTTTTGTTAGAGACATTGAAAAAGACAGCAAAAGAAAGTAACAAAGAAGGAAGGATTGTCAATGTCTCATCACGACGGCACCAATTTTCATATCGTGAAGGCATCCGATTTGACAAAATCAATGATCGATCAAGGTCTTCTTTCTATCACCCTTTGCTATAA

Coding sequence (CDS)

ATGTGGTTTCTTAGCAAGAAAGGGGCATCTGGGTTCTCAGCTTCTTCCACAGCTGAAGAAGTTACAGAAGGAATCGATGGGACAGGTCTCACAGCCATTGTTACAGTTTCACTTTTGAAGGAGCCTGAATTTTCTCATCATAGGGTCTTCTGCATTAACACAGGCGCATCAAGTGGCATTGGTACTGAAACCGCTCGTGTCCTTGCGTTGCGCGGAGTACATGTAGTAATGGCGGTTAGGAATGTAGTAACTGGTAGGGAGGTCCAAGAAGCCATTGTCAAGGAAAACCCAACTGCCAAAGTTGATACCATGGAGTTGGACCTGAGCTCAATGGCATCTGTTCAGAATTTTGCATCAAATTTCAAGTCCTCAGGTCTTCCACTGAACATTCTCGTTAATAATGCAGGAGTCATGGCTTCCCCTTTCTTGCTCTCGAAGGACAAGATAGAATTGCAATTTGCAACAAACCATGTGGGACATTTTCTTTTGACAAATCTTTTGTTAGAGACATTGAAAAAGACAGCAAAAGAAAGTAACAAAGAAGGAAGGATTGTCAATGTCTCATCACGACGGCACCAATTTTCATATCGTGAAGGCATCCGATTTGACAAAATCAATGATCGATCAAGGTCTTCTTTCTATCACCCTTTGCTATAA

Protein sequence

MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGIGTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASNFKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNKEGRIVNVSSRRHQFSYREGIRFDKINDRSRSSFYHPLL

Homology

[Close]

BLAST of Lsi09G000930 vs. ExPASy Swiss-Prot
Match: A2RVM0 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70
Identity = 142/212 (66.98%), Postives = 167/212 (78.77%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF   KGASGFS+ STAEEVT G+DGTGLTAIV                   TGASSGI
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G ETARVL+LRGVHVVMAVRN  +G +V+E IVK+ P AK+D MELDLSSM SV+ FAS 
Sbjct: 61  GVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASE 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           +KS+GLPLN+L+NNAG+MA PF+LSKD IELQFATNH+GHFLLT LLL+T+K T++ES +
Sbjct: 121 YKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKR 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRSRSS 213
           EGRIVN+SS  H+FSY EG+RFDKIND+S  S
Sbjct: 181 EGRIVNLSSEAHRFSYPEGVRFDKINDKSSYS 193

[Close]

BLAST of Lsi09G000930 vs. ExPASy Swiss-Prot
Match: Q6RVV4 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.4e-68
Identity = 140/210 (66.67%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MW-FLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSG 60
           MW F SKKG SGFS SSTAE+VT GID TGLTAIV                   TGASSG
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIV-------------------TGASSG 60

Query: 61  IGTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFAS 120
           IG ET RVLALRG HV+M VRN+V  ++V++ I+K+ P+AKVD +ELDLSS+ SV+ FAS
Sbjct: 61  IGAETTRVLALRGAHVIMGVRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFAS 120

Query: 121 NFKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESN 180
            F SSG PLNIL+NNAG+MA PF LSKD IELQFATNH+GHFLLTNLLL+T+KKT +ES 
Sbjct: 121 EFNSSGRPLNILINNAGIMACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESK 180

Query: 181 KEGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           KEGRIVNV+S  H+F+Y EGIRFDKIND+S
Sbjct: 181 KEGRIVNVASEAHRFAYPEGIRFDKINDQS 191

[Close]

BLAST of Lsi09G000930 vs. ExPASy Swiss-Prot
Match: A0A078ISJ6 (Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=TIC32B PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-48
Identity = 106/207 (51.21%), Postives = 138/207 (66.67%), Query Frame = 0


Query: 6   KKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGIGTETA 65
           K G SG+ ++STAE+VT  ID   LTAI+                   TG +SGIG E A
Sbjct: 10  KAGKSGYGSASTAEDVTHSIDAKHLTAII-------------------TGGTSGIGLEAA 69

Query: 66  RVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASNFKSSG 125
           RVL +RG HV++A RN     + +E I++  P A++D ++LDLSS+ SV++F   F +  
Sbjct: 70  RVLGMRGAHVIIAARNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALN 129

Query: 126 LPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNKEGRIV 185
           +PLNIL+NNAGVM  PF LS+D IE QFATNH+GHFLLTNLLL+ +K +A+ES  EGRIV
Sbjct: 130 VPLNILINNAGVMFCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIV 189

Query: 186 NVSSRRHQFSYREGIRFDKINDRSRSS 213
           N+SS  H ++Y EGI FD IND  R S
Sbjct: 190 NLSSIAHTYTYTEGIMFDYINDPDRYS 197

[Close]

BLAST of Lsi09G000930 vs. ExPASy Swiss-Prot
Match: A0A078IS66 (Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=TIC32A PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.0e-48
Identity = 106/207 (51.21%), Postives = 138/207 (66.67%), Query Frame = 0


Query: 6   KKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGIGTETA 65
           K G SG+ ++STAE+VT  ID   LTAI+                   TG +SGIG E A
Sbjct: 10  KAGKSGYGSASTAEDVTHSIDAKHLTAII-------------------TGGTSGIGLEAA 69

Query: 66  RVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASNFKSSG 125
           RVL +RG HV++A RN     + +E I++  P A++D ++LDLSS+ SV++F   F +  
Sbjct: 70  RVLGMRGAHVIIASRNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALN 129

Query: 126 LPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNKEGRIV 185
           +PLNIL+NNAGVM  PF LS+D IE QFATNH+GHFLLTNLLL+ +K +A+ES  EGRIV
Sbjct: 130 VPLNILINNAGVMFCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIV 189

Query: 186 NVSSRRHQFSYREGIRFDKINDRSRSS 213
           N+SS  H ++Y EGI FD IND  R S
Sbjct: 190 NLSSIAHTYTYTEGIMFDYINDPDRYS 197

[Close]

BLAST of Lsi09G000930 vs. ExPASy Swiss-Prot
Match: Q5F389 (WW domain-containing oxidoreductase OS=Gallus gallus OX=9031 GN=WWOX PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-26
Identity = 73/184 (39.67%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 12  FSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGIGTETARVLALR 71
           +  +STA E+ +G D +G   I+                   TGA+SGIG ETA+  AL 
Sbjct: 107 YDGNSTAMEILQGRDLSGKVIII-------------------TGANSGIGFETAKSFALH 166

Query: 72  GVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASNFKSSGLPLNIL 131
           G +V++A RN+  G +  + I++E   AKV+ M LDL+S+ SVQNFA  FKS  +PL+IL
Sbjct: 167 GAYVILACRNMSRGNDAVQRILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHIL 226

Query: 132 VNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNKEGRIVNVSSRR 191
           V NA +  S + L++D +E  F  NH+GHF L  LL + L++++       R+V VSS  
Sbjct: 227 VCNAAIFGSSWCLTEDGLESTFQVNHLGHFYLVQLLEDILRRSS-----PARVVVVSSES 266

Query: 192 HQFS 196
           H+F+
Sbjct: 287 HRFT 266

[Close]

BLAST of Lsi09G000930 vs. ExPASy TrEMBL
Match: A0A0A0KNI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141110 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.5e-86
Identity = 178/209 (85.17%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF+S+KG SGFSASSTAEEVT+GI+GTGLTAIV                   TGASSGI
Sbjct: 1   MWFVSRKGPSGFSASSTAEEVTQGINGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           GTETARVLALRGVHVVMAVRNV TGREVQEAI+KENPTAKVDTMELDLSSMASV+NFASN
Sbjct: 61  GTETARVLALRGVHVVMAVRNVATGREVQEAIIKENPTAKVDTMELDLSSMASVRNFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAK S +
Sbjct: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKNSER 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND+S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDQS 190

[Close]

BLAST of Lsi09G000930 vs. ExPASy TrEMBL
Match: A0A6J1I6C2 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111471521 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-84
Identity = 178/209 (85.17%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWFLS+KG SGFSASSTAEEVTEGIDGTGLTAIV                   TGASSGI
Sbjct: 1   MWFLSRKGPSGFSASSTAEEVTEGIDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G+ETARVLALRGV VVMAVRNV TGR+VQEAIVKENPTAKVDTMELDLSSMASV+ FASN
Sbjct: 61  GSETARVLALRGVRVVMAVRNVATGRKVQEAIVKENPTAKVDTMELDLSSMASVRKFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           F SSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTA ES K
Sbjct: 121 FNSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTATESKK 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDPS 190

[Close]

BLAST of Lsi09G000930 vs. ExPASy TrEMBL
Match: A0A6J1E3K6 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430279 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-84
Identity = 178/209 (85.17%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWFLS+KG SGFSASSTAEEVTEGIDGTGL AIV                   TGASSGI
Sbjct: 1   MWFLSRKGPSGFSASSTAEEVTEGIDGTGLIAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G+ETARVLALRGV VVMAVRNV TGR+VQEAIVKENPTAKVDTMELDLSSMASV+NFASN
Sbjct: 61  GSETARVLALRGVRVVMAVRNVATGRKVQEAIVKENPTAKVDTMELDLSSMASVRNFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           F SSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTA ES K
Sbjct: 121 FNSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTATESKK 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDPS 190

[Close]

BLAST of Lsi09G000930 vs. ExPASy TrEMBL
Match: A0A1S3AUT5 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103482904 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 4.2e-84
Identity = 173/209 (82.78%), Postives = 184/209 (88.04%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF+++KG SGFSASSTAEEVT+GI+G GLTAIV                   TGASSGI
Sbjct: 1   MWFVNRKGPSGFSASSTAEEVTQGINGNGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           GTETARVLALRGVHV+MAVRNV TGREVQ+ IVKENPTAKVDTMELDLSSMASV+NF SN
Sbjct: 61  GTETARVLALRGVHVIMAVRNVATGREVQKVIVKENPTAKVDTMELDLSSMASVRNFTSN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAK+S +
Sbjct: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKDSER 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND+S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDQS 190

[Close]

BLAST of Lsi09G000930 vs. ExPASy TrEMBL
Match: A0A5A7TIJ9 (Short-chain dehydrogenase TIC 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001080 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 7.2e-84
Identity = 172/209 (82.30%), Postives = 185/209 (88.52%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF+++KG SGFSASSTAEEVT+GI+G GLTAIV                   TGASSGI
Sbjct: 1   MWFVNRKGPSGFSASSTAEEVTQGINGNGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G+ETARVLALRGVHV+MAVRNV TGREVQ+AIVKENPTAKVDTMELDLSSMASV+NF SN
Sbjct: 61  GSETARVLALRGVHVIMAVRNVATGREVQKAIVKENPTAKVDTMELDLSSMASVRNFTSN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           FKSSGLPLNILVNNAGVMASPFLLSKDK+ELQFATNHVGHFLLTNLLLETLKKTAK+S +
Sbjct: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKLELQFATNHVGHFLLTNLLLETLKKTAKDSER 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND+S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDQS 190

[Close]

BLAST of Lsi09G000930 vs. NCBI nr
Match: XP_038875177.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 332.8 bits (852), Expect = 2.2e-87
Identity = 182/210 (86.67%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWFLSKKG SGFSASSTAEEVTEGIDGTGLTAIV                   TGASSGI
Sbjct: 1   MWFLSKKGPSGFSASSTAEEVTEGIDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           GTETARVLALRGVHVVMAVRN+ TGREVQEAIVKENP+AKVDTMELDLSSMASVQNFASN
Sbjct: 61  GTETARVLALRGVHVVMAVRNLATGREVQEAIVKENPSAKVDTMELDLSSMASVQNFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           FKSSGLPL+ILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKES+K
Sbjct: 121 FKSSGLPLSILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESDK 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRSR 211
           EGRIVNVSSRRHQFSYREGI+F+KIND+SR
Sbjct: 181 EGRIVNVSSRRHQFSYREGIQFEKINDQSR 191

[Close]

BLAST of Lsi09G000930 vs. NCBI nr
Match: XP_011654654.1 (short-chain dehydrogenase TIC 32, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 7.2e-86
Identity = 178/209 (85.17%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF+S+KG SGFSASSTAEEVT+GI+GTGLTAIV                   TGASSGI
Sbjct: 1   MWFVSRKGPSGFSASSTAEEVTQGINGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           GTETARVLALRGVHVVMAVRNV TGREVQEAI+KENPTAKVDTMELDLSSMASV+NFASN
Sbjct: 61  GTETARVLALRGVHVVMAVRNVATGREVQEAIIKENPTAKVDTMELDLSSMASVRNFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAK S +
Sbjct: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKNSER 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND+S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDQS 190

[Close]

BLAST of Lsi09G000930 vs. NCBI nr
Match: XP_004145893.1 (short-chain dehydrogenase TIC 32, chloroplastic isoform X1 [Cucumis sativus] >KGN49937.1 hypothetical protein Csa_000242 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 7.2e-86
Identity = 178/209 (85.17%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF+S+KG SGFSASSTAEEVT+GI+GTGLTAIV                   TGASSGI
Sbjct: 1   MWFVSRKGPSGFSASSTAEEVTQGINGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           GTETARVLALRGVHVVMAVRNV TGREVQEAI+KENPTAKVDTMELDLSSMASV+NFASN
Sbjct: 61  GTETARVLALRGVHVVMAVRNVATGREVQEAIIKENPTAKVDTMELDLSSMASVRNFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAK S +
Sbjct: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKNSER 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND+S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDQS 190

[Close]

BLAST of Lsi09G000930 vs. NCBI nr
Match: XP_023549790.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 179/209 (85.65%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWFLS+KG SGFSASSTAEEVTEGIDGTGLTAIV                   TGASSGI
Sbjct: 1   MWFLSRKGPSGFSASSTAEEVTEGIDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G+ETARVLALRGV VVMAVRNV TGR+VQEAIVKENPTAKVDTMELDLSSMASV+NFASN
Sbjct: 61  GSETARVLALRGVRVVMAVRNVATGRKVQEAIVKENPTAKVDTMELDLSSMASVRNFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           F SSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTA ES K
Sbjct: 121 FNSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTATESKK 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDPS 190

[Close]

BLAST of Lsi09G000930 vs. NCBI nr
Match: XP_022922236.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 321.6 bits (823), Expect = 5.1e-84
Identity = 178/209 (85.17%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWFLS+KG SGFSASSTAEEVTEGIDGTGL AIV                   TGASSGI
Sbjct: 1   MWFLSRKGPSGFSASSTAEEVTEGIDGTGLIAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G+ETARVLALRGV VVMAVRNV TGR+VQEAIVKENPTAKVDTMELDLSSMASV+NFASN
Sbjct: 61  GSETARVLALRGVRVVMAVRNVATGRKVQEAIVKENPTAKVDTMELDLSSMASVRNFASN 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           F SSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTA ES K
Sbjct: 121 FNSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTATESKK 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRS 210
           EGRIVNVSSRRHQFSYREGIRFDKIND S
Sbjct: 181 EGRIVNVSSRRHQFSYREGIRFDKINDPS 190

[Close]

BLAST of Lsi09G000930 vs. TAIR 10
Match: AT4G23430.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 268.5 bits (685), Expect = 4.8e-72
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF   KGASGFS+ STAEEVT G+DGTGLTAIV                   TGASSGI
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G ETARVL+LRGVHVVMAVRN  +G +V+E IVK+ P AK+D MELDLSSM SV+ FAS 
Sbjct: 61  GVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASE 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           +KS+GLPLN+L+NNAG+MA PF+LSKD IELQFATNH+GHFLLT LLL+T+K T++ES +
Sbjct: 121 YKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKR 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRSRS 212
           EGRIVN+SS  H+FSY EG+RFDKIND+S S
Sbjct: 181 EGRIVNLSSEAHRFSYPEGVRFDKINDKSSS 192

[Close]

BLAST of Lsi09G000930 vs. TAIR 10
Match: AT4G23430.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 8.2e-72
Identity = 142/212 (66.98%), Postives = 167/212 (78.77%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF   KGASGFS+ STAEEVT G+DGTGLTAIV                   TGASSGI
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G ETARVL+LRGVHVVMAVRN  +G +V+E IVK+ P AK+D MELDLSSM SV+ FAS 
Sbjct: 61  GVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASE 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           +KS+GLPLN+L+NNAG+MA PF+LSKD IELQFATNH+GHFLLT LLL+T+K T++ES +
Sbjct: 121 YKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKR 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRSRSS 213
           EGRIVN+SS  H+FSY EG+RFDKIND+S  S
Sbjct: 181 EGRIVNLSSEAHRFSYPEGVRFDKINDKSSYS 193

[Close]

BLAST of Lsi09G000930 vs. TAIR 10
Match: AT4G23420.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-71
Identity = 143/212 (67.45%), Postives = 165/212 (77.83%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF   KGASGFS+ STAEEVT G+DGTGLTAIV                   TGASSGI
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G ETARVLALRGVHVVMAVRN   G +V+E IVK+ P AKVD MEL+LSSM SV+ FAS 
Sbjct: 61  GVETARVLALRGVHVVMAVRNTGAGAKVKEDIVKQVPGAKVDVMELELSSMESVRKFASE 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           +KS+GLPLN+L+NNAG+MA PF+LSKD IELQFATNH+GHFLLT LLL+T+K T++ES +
Sbjct: 121 YKSAGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKNTSRESKR 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRSRSS 213
           EGRIVNVSS  H++SY EG+RFDKIND S  S
Sbjct: 181 EGRIVNVSSEAHRYSYPEGVRFDKINDESSYS 193

[Close]

BLAST of Lsi09G000930 vs. TAIR 10
Match: AT4G23420.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-71
Identity = 143/212 (67.45%), Postives = 165/212 (77.83%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MWF   KGASGFS+ STAEEVT G+DGTGLTAIV                   TGASSGI
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G ETARVLALRGVHVVMAVRN   G +V+E IVK+ P AKVD MEL+LSSM SV+ FAS 
Sbjct: 61  GVETARVLALRGVHVVMAVRNTGAGAKVKEDIVKQVPGAKVDVMELELSSMESVRKFASE 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           +KS+GLPLN+L+NNAG+MA PF+LSKD IELQFATNH+GHFLLT LLL+T+K T++ES +
Sbjct: 121 YKSAGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKNTSRESKR 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRSRSS 213
           EGRIVNVSS  H++SY EG+RFDKIND S  S
Sbjct: 181 EGRIVNVSSEAHRYSYPEGVRFDKINDESSYS 193

[Close]

BLAST of Lsi09G000930 vs. TAIR 10
Match: AT4G11410.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 260.4 bits (664), Expect = 1.3e-69
Identity = 142/210 (67.62%), Postives = 164/210 (78.10%), Query Frame = 0


Query: 1   MWFLSKKGASGFSASSTAEEVTEGIDGTGLTAIVTVSLLKEPEFSHHRVFCINTGASSGI 60
           MW    KGASGFSA STAEEVT GIDGTGLTAIV                   TGASSGI
Sbjct: 1   MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIV-------------------TGASSGI 60

Query: 61  GTETARVLALRGVHVVMAVRNVVTGREVQEAIVKENPTAKVDTMELDLSSMASVQNFASN 120
           G ET RVLALRGVHVVMAVRN  +G +V++ I+KE P AK+D M+LDLSSMASV++FAS 
Sbjct: 61  GEETTRVLALRGVHVVMAVRNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASE 120

Query: 121 FKSSGLPLNILVNNAGVMASPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKESNK 180
           ++S  LPLN+L+NNAG+MA PFLLS D IELQFATNH+GHFLLTNLLLE +KKTA ESN+
Sbjct: 121 YQSLDLPLNLLINNAGIMACPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNR 180

Query: 181 EGRIVNVSSRRHQFSYREGIRFDKINDRSR 211
           EGRIV VSS  H+F+YREG++FDKIND +R
Sbjct: 181 EGRIVIVSSEGHRFAYREGVQFDKINDEAR 191

The following BLAST results are available for this feature:

BLAST of Lsi09G000930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVM0	1.2e-70	66.98	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6RVV4	2.4e-68	66.67	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
A0A078ISJ6	4.7e-48	51.21	Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A0A078IS66	8.0e-48	51.21	Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
Q5F389	3.0e-26	39.67	WW domain-containing oxidoreductase OS=Gallus gallus OX=9031 GN=WWOX PE=2 SV=2	[more]

BLAST of Lsi09G000930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNI0	3.5e-86	85.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141110 PE=3 SV=1	[more]
A0A6J1I6C2	2.5e-84	85.17	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E3K6	2.5e-84	85.17	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=36...	[more]
A0A1S3AUT5	4.2e-84	82.78	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7TIJ9	7.2e-84	82.30	Short-chain dehydrogenase TIC 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Lsi09G000930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875177.1	2.2e-87	86.67	short-chain dehydrogenase TIC 32, chloroplastic-like [Benincasa hispida]	[more]
XP_011654654.1	7.2e-86	85.17	short-chain dehydrogenase TIC 32, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_004145893.1	7.2e-86	85.17	short-chain dehydrogenase TIC 32, chloroplastic isoform X1 [Cucumis sativus] >KG...	[more]
XP_023549790.1	1.0e-84	85.65	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
XP_022922236.1	5.1e-84	85.17	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Lsi09G000930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23430.1	4.8e-72	67.30	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.2	8.2e-72	66.98	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23420.1	1.1e-71	67.45	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23420.2	1.1e-71	67.45	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G11410.1	1.3e-69	67.62	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 176..192 score: 29.5 coord: 126..137 score: 50.51 coord: 50..67 score: 39.2
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 54..191 e-value: 2.8E-24 score: 85.7
None	No IPR available	GENE3D	3.40.50.720		coord: 28..216 e-value: 2.9E-41 score: 143.4
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 2..210
None	No IPR available	PANTHER	PTHR24320:SF205	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED	coord: 2..210
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 54..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G000930.1	Lsi09G000930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity