Lsi08G003220 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAAACAAAATTCTCTGTAATAATCGCCGTTGTGGCGGTGGCTTTGGTGGCAGCGGGCGTGGTGGTGGAAGGATACGGCGGAAAAGTAGGCGGAAGAATGGAGATCAAAGACGTGAAGAGGAATGAAGAAGTGCAGCGATTAGGAAGATTCAGCGTGGAGGAGTACAATCGGATGGGAGGCAGCGGCGGAGGAGAGGTGAAATTCGCGGCGGTGATTGCGGCGGAGAGGCAGGTGGTGTCGGGAACGAAGTACTATTTGAGAATTTTGGGGATTCAGAATGGGGAGAGGAAGATTTTTGATTCGGTTGTGATTGTGAAGCCGTGGATTGGTTCTAAGCGCCTTCTGGATTTTTCGGCTTCCAGAGTTTTGAGCACTTCAATTTTTAATTTCTGA ATGGCGGAAACAAAATTCTCTGTAATAATCGCCGTTGTGGCGGTGGCTTTGGTGGCAGCGGGCGTGGTGGTGGAAGGATACGGCGGAAAAGTAGGCGGAAGAATGGAGATCAAAGACGTGAAGAGGAATGAAGAAGTGCAGCGATTAGGAAGATTCAGCGTGGAGGAGTACAATCGGATGGGAGGCAGCGGCGGAGGAGAGGTGAAATTCGCGGCGGTGATTGCGGCGGAGAGGCAGGTGGTGTCGGGAACGAAGTACTATTTGAGAATTTTGGGGATTCAGAATGGGGAGAGGAAGATTTTTGATTCGGTTGTGATTGTGAAGCCGTGGATTGGTTCTAAGCGCCTTCTGGATTTTTCGGCTTCCAGAGTTTTGAGCACTTCAATTTTTAATTTCTGA ATGGCGGAAACAAAATTCTCTGTAATAATCGCCGTTGTGGCGGTGGCTTTGGTGGCAGCGGGCGTGGTGGTGGAAGGATACGGCGGAAAAGTAGGCGGAAGAATGGAGATCAAAGACGTGAAGAGGAATGAAGAAGTGCAGCGATTAGGAAGATTCAGCGTGGAGGAGTACAATCGGATGGGAGGCAGCGGCGGAGGAGAGGTGAAATTCGCGGCGGTGATTGCGGCGGAGAGGCAGGTGGTGTCGGGAACGAAGTACTATTTGAGAATTTTGGGGATTCAGAATGGGGAGAGGAAGATTTTTGATTCGGTTGTGATTGTGAAGCCGTGGATTGGTTCTAAGCGCCTTCTGGATTTTTCGGCTTCCAGAGTTTTGAGCACTTCAATTTTTAATTTCTGA MAETKFSVIIAVVAVALVAAGVVVEGYGGKVGGRMEIKDVKRNEEVQRLGRFSVEEYNRMGGSGGGEVKFAAVIAAERQVVSGTKYYLRILGIQNGERKIFDSVVIVKPWIGSKRLLDFSASRVLSTSIFNF Homology
BLAST of Lsi08G003220 vs. ExPASy Swiss-Prot
Match: Q5N806 (Cysteine proteinase inhibitor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0915200 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.6e-19 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy Swiss-Prot
Match: Q0JGM8 (Cysteine proteinase inhibitor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0915401 PE=3 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18 Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy Swiss-Prot
Match: Q10993 (Cysteine proteinase inhibitor B OS=Helianthus annuus OX=4232 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18 Identity = 49/97 (50.52%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy Swiss-Prot
Match: A2XS65 (Cysteine proteinase inhibitor 10 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_014908 PE=3 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15 Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy Swiss-Prot
Match: P0C579 (Cysteine proteinase inhibitor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0350100 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15 Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy TrEMBL
Match: A0A0A0KC20 (Cystatin OS=Cucumis sativus OX=3659 GN=Csa_6G022340 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47 Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy TrEMBL
Match: A0A1S3CPD1 (cysteine proteinase inhibitor B OS=Cucumis melo OX=3656 GN=LOC103503076 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 9.5e-47 Identity = 109/132 (82.58%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy TrEMBL
Match: A0A6J1H8E3 (cysteine proteinase inhibitor B OS=Cucurbita moschata OX=3662 GN=LOC111461002 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.1e-37 Identity = 84/125 (67.20%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy TrEMBL
Match: A0A6J1KTZ7 (cysteine proteinase inhibitor B-like OS=Cucurbita maxima OX=3661 GN=LOC111498186 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36 Identity = 82/125 (65.60%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Lsi08G003220 vs. ExPASy TrEMBL
Match: A0A5A7VC11 (Cysteine proteinase inhibitor B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1312G00040 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 3.4e-36 Identity = 85/98 (86.73%), Postives = 87/98 (88.78%), Query Frame = 0
BLAST of Lsi08G003220 vs. NCBI nr
Match: XP_038886316.1 (cysteine proteinase inhibitor 4 [Benincasa hispida]) HSP 1 Score: 203.8 bits (517), Expect = 9.4e-49 Identity = 112/132 (84.85%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of Lsi08G003220 vs. NCBI nr
Match: XP_004138536.1 (cysteine proteinase inhibitor B [Cucumis sativus] >KGN45922.1 hypothetical protein Csa_005586 [Cucumis sativus]) HSP 1 Score: 199.1 bits (505), Expect = 2.3e-47 Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of Lsi08G003220 vs. NCBI nr
Match: XP_008465470.1 (PREDICTED: cysteine proteinase inhibitor B [Cucumis melo]) HSP 1 Score: 196.1 bits (497), Expect = 2.0e-46 Identity = 109/132 (82.58%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of Lsi08G003220 vs. NCBI nr
Match: XP_022960190.1 (cysteine proteinase inhibitor B [Cucurbita moschata]) HSP 1 Score: 164.5 bits (415), Expect = 6.4e-37 Identity = 84/125 (67.20%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of Lsi08G003220 vs. NCBI nr
Match: KAG7025292.1 (hypothetical protein SDJN02_11787, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.5 bits (410), Expect = 2.4e-36 Identity = 83/125 (66.40%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of Lsi08G003220 vs. TAIR 10
Match: AT2G31980.1 (PHYTOCYSTATIN 2 ) HSP 1 Score: 81.3 bits (199), Expect = 6.6e-16 Identity = 40/105 (38.10%), Postives = 69/105 (65.71%), Query Frame = 0
BLAST of Lsi08G003220 vs. TAIR 10
Match: AT3G12490.1 (cystatin B ) HSP 1 Score: 61.2 bits (147), Expect = 7.1e-10 Identity = 31/89 (34.83%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Lsi08G003220 vs. TAIR 10
Match: AT3G12490.2 (cystatin B ) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-09 Identity = 36/125 (28.80%), Postives = 72/125 (57.60%), Query Frame = 0
BLAST of Lsi08G003220 vs. TAIR 10
Match: AT2G40880.1 (cystatin A ) HSP 1 Score: 57.8 bits (138), Expect = 7.8e-09 Identity = 28/92 (30.43%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Lsi08G003220 vs. TAIR 10
Match: AT5G05110.1 (Cystatin/monellin family protein ) HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08 Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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