Lsi06G015800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G015800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Golgin subfamily A member 6-like protein 2
Location	chr06: 26216297 .. 26217664 (-)
RNA-Seq Expression	Lsi06G015800
Synteny	Lsi06G015800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATATCAGATTCTCAACTCCAATGGGGTCACAGGTCAAATCTGTCTGTATTTTCTTGTATATAAAATGACAGCCATTCACGAGCCTCATAGACGGTTTCCACTAATCATTAACTCTGAGAGAGAGCTAACCAAGTAGAGCAAGGGATAAACACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTACAAACTCCACATCAAACACATCTCTCTCCCTTATTTCCTGTCTATAAGACCAGCTTCAAAAACTTACTCAATAACCCAGAAAAGCTAAAGAAGCAAAGCCTTCACTAAGATGGGTGTATGCTCAAGCAAAGATGGGAGTGATATTTGTGAAGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGGCTCAAAGAGGAGGTTAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAAGGAAATTTTGGAGAAAAGACTGCAACAGAATGGGAAATGGAGGGAACTCCAAATTCAATCTTTGAGCAGATACAACAAGAAAGAGCGCGAAGAGATGAAGCCATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGTATGACTATGATCTCATCTTAAAATCTTATTTTCCCTTTGTTTCTGAATTTTTTGTTGATTGTCTTTCAATTCACTAGTTTAAGCTCATGATTAGAGATTAATGAAGGCTAGCAAAAAACTAAGACTGGAAAAATTCAATAAATGAACATTAGATCTTCCATCACTAACAGGCACTCTAATCATTTGCTTTGATAGGAGATGGATTATACTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAACTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAGGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGATAGAACCTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAAGTAGGCATGAAAACAGAATTTTCAATACCACATTAGAATTAAGAACAAATAATGAAATGCCAATTGGAACTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTTACCTTTGCCCATTTCAACCCAAATGTTATTCTCATTATCATTTTGTTGGCATGGTCCAAAAGGTAAACATTCTTGTTCTTTAG

mRNA sequence

CACATATCAGATTCTCAACTCCAATGGGGTCACAGGTCAAATCTGTCTGTATTTTCTTGTATATAAAATGACAGCCATTCACGAGCCTCATAGACGGTTTCCACTAATCATTAACTCTGAGAGAGAGCTAACCAAGTAGAGCAAGGGATAAACACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTACAAACTCCACATCAAACACATCTCTCTCCCTTATTTCCTGTCTATAAGACCAGCTTCAAAAACTTACTCAATAACCCAGAAAAGCTAAAGAAGCAAAGCCTTCACTAAGATGGGTGTATGCTCAAGCAAAGATGGGAGTGATATTTGTGAAGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGGCTCAAAGAGGAGGTTAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAAGGAAATTTTGGAGAAAAGACTGCAACAGAATGGGAAATGGAGGGAACTCCAAATTCAATCTTTGAGCAGATACAACAAGAAAGAGCGCGAAGAGATGAAGCCATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAACTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAGGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAAATTAAGAACAAATAATGAAATGCCAATTGGAACTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTTACCTTTGCCCATTTCAACCCAAATGTTATTCTCATTATCATTTTGTTGGCATGGTCCAAAAGGTAAACATTCTTGTTCTTTAG

Coding sequence (CDS)

ATGGGTGTATGCTCAAGCAAAGATGGGAGTGATATTTGTGAAGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGGCTCAAAGAGGAGGTTAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAAGGAAATTTTGGAGAAAAGACTGCAACAGAATGGGAAATGGAGGGAACTCCAAATTCAATCTTTGAGCAGATACAACAAGAAAGAGCGCGAAGAGATGAAGCCATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAACTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAGGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAAATTAAGAACAAATAATGAAATGCCAATTGGAACTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTTACCTTTGCCCATTTCAACCCAAATGTTATTCTCATTATCATTTTGTTGGCATGGTCCAAAAGGTAAACATTCTTGTTCTTTAG

Protein sequence

MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKCVQEGCYLCPFQPKCYSHYHFVGMVQKVNILVL

Homology

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BLAST of Lsi06G015800 vs. ExPASy Swiss-Prot
Match: Q8IIG7 (Uncharacterized protein PF11_0207 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF11_0207 PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.2e-04
Identity = 54/186 (29.03%), Postives = 98/186 (52.69%), Query Frame = 0


Query: 14  EDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKML 73
           ++++K +KE+I+ ++EE++ V  E+ +E K   K+ +    KE   K  K+ +KEEVK  
Sbjct: 545 KEEIKEVKEEIKEVKEEIKEVKEEIKEEIK-EVKEEIKEEIKEE-IKEVKEEIKEEVKEE 604

Query: 74  RKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEAIEKWKQLYHAIKI 133
            K+VKE I E++E    E      E++     + E+I++E     E I+  +++   IK 
Sbjct: 605 IKEVKEEIKEVKEEIKEEVKEEIKEVKEEIKEVKEEIKEEIKEVKEEIK--EEVKEEIKE 664

Query: 134 ELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKA--LKEQVVSMEQE-KYKRNRE 193
           E+ ++ +   N       ++E T+  K     KEET K   + ++V+  +QE K K  R 
Sbjct: 665 EIKEIKEELKNDI-----SSETTKEEKNTEHKKEETEKKKFIPKRVIMYQQELKEKEERN 721

Query: 194 IDILRQ 197
           + +L Q
Sbjct: 725 LKLLEQ 721

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BLAST of Lsi06G015800 vs. ExPASy TrEMBL
Match: A0A0A0LS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.2e-98
Identity = 195/220 (88.64%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETFHKCVC 217

[Close]

BLAST of Lsi06G015800 vs. ExPASy TrEMBL
Match: A0A5D3BGY2 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001180 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.0e-97
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETSHKCVC 217

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BLAST of Lsi06G015800 vs. ExPASy TrEMBL
Match: A0A1S3CLU2 (uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.0e-97
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETSHKCVC 217

[Close]

BLAST of Lsi06G015800 vs. ExPASy TrEMBL
Match: A0A5A7UW79 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001160 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.6e-97
Identity = 191/220 (86.82%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVR V++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVREVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETSHKCVC 217

[Close]

BLAST of Lsi06G015800 vs. ExPASy TrEMBL
Match: A0A6J1EVL0 (uncharacterized protein LOC111438196 OS=Cucurbita moschata OX=3662 GN=LOC111438196 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.1e-94
Identity = 187/220 (85.00%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSK GS+IC+DDV GLKEKIRLLREEVRGVMSEMD+E KAHEKDMV+FAFKEA WK
Sbjct: 1   MGVCSSKGGSNICDDDVGGLKEKIRLLREEVRGVMSEMDREVKAHEKDMVMFAFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKK+L+EEVKMLRKKVKE +TEIEEGNFGEKTATEWE+E TPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKKLREEVKMLRKKVKERMTEIEEGNFGEKTATEWEIERTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGA ERTEAL+TEL AKEETIKALKEQV SM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGANERTEALQTELLAKEETIKALKEQVASM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQEKYKR+ EIDILRQSLRIMT  + N    I T  SC C
Sbjct: 181 EQEKYKRDTEIDILRQSLRIMTSKKENQ---IETFHSCVC 217

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BLAST of Lsi06G015800 vs. NCBI nr
Match: XP_038879675.1 (uncharacterized protein LOC120071454 [Benincasa hispida])

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-98
Identity = 196/220 (89.09%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I ED+VKGLKEKIRLLREEVRGVMS MDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIYEDEVKGLKEKIRLLREEVRGVMSVMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRLKEEVKMLRKKVKESITEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WGA+ERTEALKTEL+AKEETIKALKE+VVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGASERTEALKTELEAKEETIKALKEEVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQEKYKRNREIDILRQSLRIMT   +  E  I     C C
Sbjct: 181 EQEKYKRNREIDILRQSLRIMT---SKKEQQIEPFHKCVC 217

[Close]

BLAST of Lsi06G015800 vs. NCBI nr
Match: XP_004138095.1 (uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical protein Csa_013066 [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 2.5e-98
Identity = 195/220 (88.64%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETFHKCVC 217

[Close]

BLAST of Lsi06G015800 vs. NCBI nr
Match: XP_008464528.1 (PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo] >TYJ98513.1 golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 366.3 bits (939), Expect = 2.1e-97
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETSHKCVC 217

[Close]

BLAST of Lsi06G015800 vs. NCBI nr
Match: KAA0057829.1 (golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-96
Identity = 191/220 (86.82%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVR V++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVREVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETSHKCVC 217

[Close]

BLAST of Lsi06G015800 vs. NCBI nr
Match: XP_023530768.1 (uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.9 bits (912), Expect = 2.8e-94
Identity = 188/220 (85.45%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSK GS+IC+DDV GLKEKIRLLREEVRGVMSEMDKE KAHEKDMV+FAFKEA WK
Sbjct: 1   MGVCSSKGGSNICDDDVGGLKEKIRLLREEVRGVMSEMDKEVKAHEKDMVMFAFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKK+L+EEVKMLRKKVKE +TEIEEGNFGEKTATEWE+E TPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKKLREEVKMLRKKVKERMTEIEEGNFGEKTATEWEIERTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGA ERTEAL+TEL AKEETIKALKEQV SM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGANERTEALQTELLAKEETIKALKEQVASM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQEKYKR+ EIDILRQSLRIMT   +  E  I T  SC C
Sbjct: 181 EQEKYKRDTEIDILRQSLRIMT---SKKEKQIETFHSCVC 217

[Close]

BLAST of Lsi06G015800 vs. TAIR 10
Match: AT3G23930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 89/215 (41.40%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEA--G 60
           MG C+SK        + +G++      +++ RG    + KE    EK M +   KEA   
Sbjct: 1   MGGCTSK-------QERRGVRSVKETSKDQSRG-RRHLIKERDEREKVMFL-QLKEAERE 60

Query: 61  WKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRD 120
           W+ E+K+L+EEV+ LRKK++E     EE     KT T  E E     + E++  ERA RD
Sbjct: 61  WRKERKKLREEVRRLRKKLEER----EEA----KTTTTEEREYW-KWVVEEMCVERAVRD 120

Query: 121 EAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTEA-----LKTELQAK 180
           EA+EKWKQLY AIK ELD LI  T +  G       L     E TEA     L+ E++ K
Sbjct: 121 EAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLEEQEEEETEAKRVEVLRDEVRVK 180

Query: 181 EETIKALKEQVVSMEQEKYKRNREIDILRQSLRIM 202
           EET++ L+EQ+V M+++KY++ REID+LRQSLRI+
Sbjct: 181 EETVETLEEQIVLMDRQKYEKEREIDLLRQSLRIL 197

[Close]

BLAST of Lsi06G015800 vs. TAIR 10
Match: AT4G13540.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 79/199 (39.70%), Postives = 116/199 (58.29%), Query Frame = 0


Query: 9   GSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAGWKTEKKRL 68
           G    +D+    K +I++   E R      +   +  EK+ V+ A K  E  W+ E+KRL
Sbjct: 2   GGSTSKDERNSSKRRIKVKANEQR----RRETRRELDEKERVILALKMAETEWRKERKRL 61

Query: 69  KEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEAIEKWKQ 128
           +EEVK LR+K++E     EEG   +    EWE       + EQ+  ERA R+EA+E+WKQ
Sbjct: 62  REEVKRLRQKMEEK----EEGKAKQH---EWEW------VVEQMCLERAVREEAVERWKQ 121

Query: 129 LYHAIKIELDDLIQRTHNGDGLYWGATER----TEALKTELQAKEETIKALKEQVVSMEQ 188
           LY AIK ELDDLI  T+ G+ L     E      + L+ E++A+ ETI+ LK ++  ME+
Sbjct: 122 LYFAIKNELDDLIHTTY-GEALRQKPQEEVAKAVQELRKEVKARGETIETLKGRINLMEK 181

Query: 189 EKYKRNREIDILRQSLRIM 202
           ++  + REID+LRQSLRI+
Sbjct: 182 QQNGKEREIDLLRQSLRIL 182

The following BLAST results are available for this feature:

BLAST of Lsi06G015800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8IIG7	8.2e-04	29.03	Uncharacterized protein PF11_0207 OS=Plasmodium falciparum (isolate 3D7) OX=3632...	[more]

BLAST of Lsi06G015800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS07	1.2e-98	88.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1	[more]
A0A5D3BGY2	1.0e-97	87.27	Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLU2	1.0e-97	87.27	uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=...	[more]
A0A5A7UW79	8.6e-97	86.82	Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1EVL0	3.1e-94	85.00	uncharacterized protein LOC111438196 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]

BLAST of Lsi06G015800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879675.1	1.1e-98	89.09	uncharacterized protein LOC120071454 [Benincasa hispida]	[more]
XP_004138095.1	2.5e-98	88.64	uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical ...	[more]
XP_008464528.1	2.1e-97	87.27	PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo] >TYJ98513.1 golgi...	[more]
KAA0057829.1	1.8e-96	86.82	golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa]	[more]
XP_023530768.1	2.8e-94	85.45	uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi06G015800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23930.1	1.6e-23	41.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G13540.1	1.4e-22	39.70	unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsi...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	COILS	Coil	Coil	coord: 10..37
None	No IPR available	COILS	Coil	Coil	coord: 156..183
None	No IPR available	PANTHER	PTHR37226	GOLGIN FAMILY A PROTEIN	coord: 1..208
None	No IPR available	PANTHER	PTHR37226:SF4	GOLGIN FAMILY A PROTEIN	coord: 1..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G015800.1	Lsi06G015800.1	mRNA