Lsi05G012770 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G012770
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	MADS-box transcription factor FBP22
Location	chr05: 20508941 .. 20517349 (+)
RNA-Seq Expression	Lsi05G012770
Synteny	Lsi05G012770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAATCAGTATGGAATATAATTTATTTATTTATTTATTTGGAATGTCTTTCCTTTTATGTGTGGTTTAGAGGAAATGTTAGAGGACAAAGGGAATATAAATTAGTGTATAAATGAAAGAGGAAATATAACAATAAGGGCATTGAGTCCCTGGAGAGAAAGAAGGGATAAATGCAACACTTGATCAATAATCAACCAATCCCTCCTGTGTGTGTAAAAAACGTTTCTAGGGTTTCTAAAATTTCTTCCATTTCCTTTTCTCCTAACCTTCTAACCGTTTTCCCCATTTTCCCCAAAATCACTTCTTTTTGTGTTGGGGGGCCTTCTTTTTTTCCATTTTTAAACCAAAAAACAAACTCTTTCTTATTCTAGGGTTTCTGGGTTTTTAGTTTTTTTAAAGCTATTTTTGTTGCTTTTTCACTACTACTACTATTTCTTAATGATTTTTTTGTTTGTTTGGTAAGATGTATGCATAAATCCATTATTGAAGCAGCTATAATTTTTTAAATTTGGGTCCTGATTTTAAAGTTTTTAAAGTAAAAAAAGAAAAGAAAATTAATAGAAAATGGTGAGAGGAAAAGTAGAAATGAAAAGGATAGAAAATGCGACAAGTCGACAGGTAACATTCTCAAAGCGTAGAAATGGACTGTTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCAGTCATCATTTTCTCACAAAAAGGCCGTCTCTATGAATTTGCAAGCTCTGAGTATGTTTTCTTTTCTTTTCTTTCTTTTTTAATTGAAAGAAAAAAAAAAAAAAACCAATTTTCTGTTTTTAAGTTTGAATAAATGGTTTGGTTTGCAGCTATTCTATATCCACTTTTTTTCCCCTCTCTGAATCAAACCTACTTCCTGTGCTATAGTTTATTCGAGTTGTTGTACTTTTTTTTTTTTGTGATTTTTTGAAGATTTTCTGGAAATTTTAATCATTTGCCCCCACCTCTAAGGTTCCATAGGGTTTTTTCCCCCTTTCCTTTAGGGGGGGTTAGATTTGAGAGAGTTATGTAGCCTGTGTTCGTGTAATCTGAGTTTTAGCTCTCTGATTTTTTGTATTTTGTATTTAGAAAGAACTTATTCATCCATATTGAATTTTAAACAATCGTTCTCAAAAGGGCAACAATGGTTCATGTTGTTGGCATAAGTTGGGTTAAGTGGTTAATGAGAAAATTAGAACCTACAATTGCATAAAGAGCCAAATTTACATAGTTTTTGTAATTTCTATTCGATTAAATTACTGTAATAAATCTAAAGTAAAGTATATTTATGTTATCTTAGTATAATTAAGTTCAAAATGAATATTATATATATACTTTTTTTTTTTTTTTTCCTTCCTTCTGTTGATAAGGCTTGCTTCTCTTGTTGCCTCTAGGAATGTCTGTTTGTTGTAAATTTTTAGAGCAGATAACATAATTGTCTATGAATTAGCAGCTTTCCGAGTATTCTTTTAGTTAGGATAAATGTCTTTCTAGTGTTGGCCATGACACATTCGTTCTTGATAGAGGTTGTTTAGGGGCCCGTAATCGAATGTATTTGGATTGTAATGTAATTCAAAACTCATGTTTGGACGGAACGTTTTGAGCCTGATTTGTAATATTAAACTCATTTCGTTTCGACAGTTTTTAACTAAACTCTCTTTCCCACCGTTTCACAACTGTATTTCTGTTTCACTCTCGATACCTCATGCATTCCACAACACTCCTCTGATTTCCATTAATCTTGATTACATTCCAGCCTCCCAAACAGAATTGTTTGCTTGCTTAAAAAAAAAAAAAAGCATTTATATACTATTTTTTTTCTTGTATGATTTGAGAAGTATATACTATCTTTACTCTAGCTAATTTAAAACTAATTTATTTTAATAAATTTAAAATAAAATACAATTTATTTTTATTACTTCAAATATTGTTGTTAATTTGAAAAACTAAGTTTTTTAAGTTCAACAATTGACCGGGAGAGTGAGAGATCGAACCATCAACTTTTTGGATGGTAATTAGTGTCTTATTAACTTTAAAACTAGTTAATACATATATTATTGATCCAAGAGTTGGTCTAATATTCAAATTTTACACCCCACAGAGTGATTTTATTTTTTAAAATTCTTGTCTAATTTTTTAAAATTGTGAATAAACAAAATTTGAAAACCATAAATGGAAGTAGTTTGTTTGTTGTTCTAGGCTCTAATTTTTTACCTAACATAAATAAAAGCATTATCTAAAAACAGTTGACTTATAAAAATTTATTTTGATTTTCTTTTAAAAAAATTAATATATAAACATTGAACTTAAAGAATAATTTTCAATTAAAACATCTATTTTATTCTGAACTTAAAAGGTTGGAGAACAAGAATTAACAAAGAATTACCAAACAGTTTCTCCAAAAAAAAAATAATAATAAATAAATATATCAAACAGTTTAAGTATATATATATATATATATATAATTGACCAATAGACAGTTTCCAAACGTGGTTCTATTTTTTTTTTTTTTTCAATTCTCAAAAGAGTAAACTCCAAATAAGAAATTTAAATGTTACTGAACGAGTCCTTAAAGTAAAAATCATGTATTTGGCTTAGGAATCAAATATTACCTTGTTCTAATATCATAAAGTTGAACATTGAACTTAAATTAGGTGTTAAAATTAATACGAAGTCAGGTTTGGGTTGTGGTTATATGTTTGTTCTTTTGCCTATGTTTGATCGTTTTTCCATTTAATTATGTGGCTATGTTTTGATGAACGACGTGACATGGTTCAAAAATTAAATAAAAGATCTACTTTTGTTGAATGAAATGCTATCGAATTTATTTGAATTATACTCGTTCATGTGGTAGGACAAATGCATACAAAATTATTCTTGGAACTTCTTTTTTCTTTTTGTCTTTTTTTTCCTTCTAACAAATAAATATATTGAATTGTAGAGTAAATATAAGCATGATAGGGTTTATAGGTAAGTGAATATATATCATTAACTATAGGCAGTAAAAACAGTAGATTATTGTAGGGATAAGGAGGAGGAAAGAAAAATGAGGAGTGAAAAGTGAAGTGGGCAGTACTATAGACTGTAGGAGATGAAATGAATTGGTATAAGGGAGGTGAATACTTCACTTTTTTTCCTTTATCAAGTACGAGTGATGTTGAATGAATGGACAGAGTGAATAGTGCAATAGGGATAAGGATGGTAAATACTAGTACTATTATTCCAAAATAATAATAATAATAATAACAATAAAATCCTTTAAAACTTATTTCGGAAGAATTAATATAATATATTATGGTTTCAGGATGCCGAGAATTGTAGAGCGCTATCGCAAATGTTCAAGAGATGGGAAAAACTGTACCAAATTTGATAGACAACTACAATTACAGGTCTTTCCCCTCCTCAACTACCAACATATATTTTTCCTCATAAATTATTCACTTTACTCCAATTATATTTTCATCTTTCTAACTTTATGTTTTTGTTTCTCCTTTAAATTGTTTCTTGAATTTTCATTTTTGTTCATTTGTGATATGGATAACTTCCAACTAATTGATTTAAAATATTTATAATGTGAACTTTTAATTAATTTTAATACTGACAACAATTATTGAAATTTAATTCAATTCAATTCAAATTAATAAATAGAATATCACTCGAATTAACTACATAAAAAAAATTATACTTAAAATTCAAGGTAAATATATAATACTTTAAAATATAATGATCAAATAGAAATTAAATTCAAAATTATAATTATAATTATAGCGTAATGTTTTGAATCTTAAGAAAAAAAAGACTAAGAGACTAAAAAATATTTTCAAAATTACCCATATTACTTATATTACTTATGTTTGTTTGGCATGTATAACCAAGGAAAGAAATAAATATGGAAAATAACCATCGCATAATTAGCAAAGCACCTTGAGCCAATCATATCATTGTTTATATTGAGTTGAATCTATATATATCGTAGTCTTTGCTTCTCACCTTCTTCTTAGTTAAGACTATAACGTTGGTTCCTGGATTTTATCATTTTCCATTTATTGTTTAGCAATTAAGGCTTGAAGCTGAAAGCATTAATAAGAAGATGGAGTTGATGCAACTTTCTCACAGGTAAATTTTTATTCATTTCATTTAATTAAATTCCTCTCTTTTCCAATATGGAATAATGTCTCAATATATATATACATACAGGAAGCTGTTAGGATATGGACTGGATTCTTGTTCTCTTGATGAACTTCAACTACTTGATGCTCAGCTTCAACGAAGCCTGTTCCAAATTAGAGCCAGAAAGGTACATATGTAAATAAATATAAGTTTTAAATTAATTATAAATTCACTCCCTATGAATTGAGGTTTTGTGTCATTCGTCCCCGTTAATTTTTCAAAATTAATAATGTAGTTCTTAAACTTATATATATATATATTTTTTAAAATCCGCTTAAGATATACTAGATATAATTATATCTGAAGTATTTGACTATTTTTAAAGTTTGGGGATTAAATAGATAAATATTTGCTTTAGGACTTAACATCTGGTAATTTAATCATATATGATTTATCGACTAACTATTATTGCCCTCGATTTCAATTTTTTTCCTTCATTATTAATTTCTCGAGAATCAAACATAGTTGAAAAACATTAGATTTCAGAACTCATATGCTTGAAAATGGGGTGTGTTCTAGGCTCAGCTATACAAGGAGCAGATACAACAATTACAAGAAAAGGTAATTAATTCAGTTAGAAATGTCTTTTAAAATCCTTTTCTTTTTTCTTTTTCATTTTTTTTTTTTTTCTTTTATTATAATTATTATCACACTTATTTTTTTTTTTTTGTCAAATTCAGGAAAGACTCCTTTCAGAAGAAAACAGGAAATTGTCTTTAAAGGTGAATAACTCTTTCGAACTCGTTTTTATTATTAATTTTTTTTTTTAATTTTTTTTTTGTGTGTTTGATACTGTTTTGTTTAAAAATTTGTACGTTAGTTGAGTTAAGCTGCATTTTCCTAATGATTTATCACATGGAGGAAAAGATTTGTTCGCTATACAAATTAAGTTGGTATTTAGAAATAAATCATAAATAACATTTTTAATTTTGGCAGAGATCATAGAAATGAAAATATAGGTATATAGAAGCCCATCCTTATCATTTATTTTGGAAGGATTTTTAAGTAAAATTGCTTCTTGTTGATTCATTTGTTTCATTTAGATGGAGCTAAAACTAAGGTACATTTATAAGTGTAGATAGTATTTAAGATATTTCAGCTTATGTGTTATTAGTTGGATGGGCCTAGAACGTCTGAAGCATAGTAGTGATAAACATGGAAGTGATGGTGGTGAGATGTTCTTTTTTGGTTTGAACATATCTTGGAGGCAAATCCGGTCGCCCACCGTTAAAGTCCGCGTCTTTGATTGCCATTTATGGTTTGGCTCCTTCCCGGGAACATCATACGAGTGTTCTGTTATCAATTTGATGCAGCGGGAAGGAAAATATATTAAGCCAAGTCTATGGCTAAATAAGGAACTTCATTCCTAAAACTTGAGAGGATTCTCCCTAAAGAACAATGTTCTATAATCAAATTGATATAAAAAAACAAAAAAAAAAATTCTATTACAACTCTAAAGTGACTATTTATAACCTTACAAAAAAAATAAAATAATTAACTAATTAATTCTAGAATCACTTAAAATATAAAAAAATTACTATAAACATAAAAAATATCAAACTATTTACAAATATAAAAAAAATTTCATTGTATTCTATCGCTGATAGATAATAAAATTTTGGGTTAATTTCAAATATAGAAAAATGAGTCAAACTATTTACAAATATAGAAAATTTTTACAATCTATCAGTGATAGATCGCGATAGAATTCTATCGCTTTCTATCGCTCAAGCGATATAATTTATTTGTTTGAGCGATAGAAAGCGATAGAATTCTATCGCGGTCTATCACTAATAGACAGTGGAATTTTTCTATGTTTGTAAATAGTTTGACTTTTTTTTTTTATATTTGAAAATGACCATAAAATATACTAATTAATCTATAATTCTCCGCATTAATTTTTTTTATTATTAAAAGCCATAATAAACGTCTAATAAATTAACATAGATATTATTATTATTTAGTTTTAAGAACTTATTTTTACTTTTTTATTCTAAAATTTGAGAGAACATGAAATAAGAAACACTTTTTCAAATATTTAGTAAATGGAAAAGAATAACTACACCCTTAACCAATGCAGTTTCGTTTTTCTTTATTAAAAAAGGAAATAATACAAATATGAAACAAAATATGCCCTTAAACATTTAATAATTAAATTGACTTGTATTGATCAGTTAAAACGATTAAACATTTTTTTTTTAGTTAAAAAAAACGATTATACATTTATAATTTAAATTCGTCCACAACTACAGGAATCTACATATGTTCTCTGTTTCTGCATTAAAAAAGGGGATAATCTGAATATAACTATTTAATTCTTATATGTATTCAGAACTTGTCCAGCGCTTGCCCCTCAACGGTCACATTTTTCATTTTTTTAACAGTGTTTTAATCAGTATTCAAAACAAAAATATTGAGTTTTCGTCTATAAAATTCAACATTTATTACTGGTAACTCTTTGAATTATTTTTTAATGTTGTTTTAAAAAAAGTTTTCAAATAATAAGTTATAGTATCCAATCATAACAAATTTGTCTGTATGAAATCTCACTCTCAAAAGTAATATTAGTGAGAAGAAATCTAATCTAGAGAGCTACAAGATAAGAGTTTTAAAAAACAGAGAAGTTATTTAAGAATTATTTAAGGCAAATATCAATTTATACTCTTAAACTTTGGGTGTTATATCAATTTAAACTCCAAACTAATAATTGTATAAATTTAAATCTTAAACTTTCACGTGTGTCCATTTAAACTTGAATGTATCAATTTAAATTCTTTTTTATGTTTTATTTAAATACACTTATGAAAGTTTAGAGTTTAAATTCAAATACTTATGAAATTTTGAAGTTTAAGTTGAAAGTTGAAAGTTTTAATTGATATAACTATTAGTTTAAGGTTTAAATTGATTTAAAAATTGAGGGTTGAATGCATTTTCGAATGTCTCTTCCTTTCCTACATGACTATAGTTGGATTTATATAAAATTTTGTAATATTAATTTCAAAGTTAGATGTTAGATTCTTCTATTCCCACCCACATATATTAAAAACTTCTCCCTTTTTGTGGTTTTAGTACCAAATGAAATTTACATATGGTTATAAAATTAAGGTTAAAATATTATTTTGGTCTCTATACCTTGAAGTTTGTTTAATTTTAGTTTTTATACATTCAATTATCCAATTTTAATTCTTATATTTTCAATAAATCTTAAAATTTGTCTTTAATGCTAGTTTATTATTATTAGTTGTTTTAAATTGTTATCTATAGTATTTTTTCTATAAATTTTAAAAACATCTTCACATATTTACCTATTTTATTTTCTAGTTTAAAAATTAGTATTTTTATTTAATCAATTTCGAAAAAAGTTAATTTTGAGGGATTAAGGGTCCGTTTGGATTGATTAGAGAAAAAAAAGTGTTTTTTTAAAAGAATTCATTTTTATTTAAATAATTTTGACAAAAATTGTTTTAAATACACTTCAAAAGCTATTTTGAGTGGTTGTTAAATACTTCAATTTTTTCCAAGATGACTTATTTTTAAAATTAAACAAATGTATTCCAAACACATTCTGAATTTAAGATTTATTGAAAATATAGAGACTAAAATTGAACAAATTAAAAGTATAAGGACCAAAATAGTATTTTAAACTAAAATTAAATTCATCAAAGTCATCATAGTCTTAACATTAAATTTTTTATTATCTCCTTGAAAAAAACAAGTTTTACTCGGCTCCCAAAAAAAAAAAAAAGTTACTCGATAAAAATGAAATTTGCATATGGTAGCGAGTGAACAAAATCATTGAAAAAAAAAAAGGTTCACTTTTTCCGTTCTATTTTCTTTTTGGTGTCCGTTCCGTCGTTTGTTGTAGCGGTTAAAGGAGTCAAAAGAGTTTCTTGCACGCTACCTTCTTCTTCTCGTACGTTTAAACAAAAATTTTTATTTTACCCTAAACCAATAATTTTAATTTTCACACTGTAATCGCAGGCCGCAGCTCACGGTGTTGCCACCACGTACGGCTGCCGGAGAAGCCCTAGTTCGGCAGTCGACACCCAATTGGCAATTTGATCGTACGTGCATGCTACATATTCAACGTTACCCATACACAAAAAAGTTTTATTATATATAGTTTATAGTTCATTTTATTTCCCTTGTAATATTATTGTGATTTTTAATTGTTTATGGCACCAATAAACATCTTCCAAATTTATGTAATTTTGTGTTTTAACT

mRNA sequence

CTTTAATCAGTATGGAATATAATTTATTTATTTATTTATTTGGAATGTCTTTCCTTTTATGTGTGGTTTAGAGGAAATGTTAGAGGACAAAGGGAATATAAATTAGTGTATAAATGAAAGAGGAAATATAACAATAAGGGCATTGAGTCCCTGGAGAGAAAGAAGGGATAAATGCAACACTTGATCAATAATCAACCAATCCCTCCTGTGTGTGTAAAAAACGTTTCTAGGGTTTCTAAAATTTCTTCCATTTCCTTTTCTCCTAACCTTCTAACCGTTTTCCCCATTTTCCCCAAAATCACTTCTTTTTGTGTTGGGGGGCCTTCTTTTTTTCCATTTTTAAACCAAAAAACAAACTCTTTCTTATTCTAGGGTTTCTGGGTTTTTAGTTTTTTTAAAGCTATTTTTGTTGCTTTTTCACTACTACTACTATTTCTTAATGATTTTTTTGTTTGTTTGGTAAGATGTATGCATAAATCCATTATTGAAGCAGCTATAATTTTTTAAATTTGGGTCCTGATTTTAAAGTTTTTAAAGTAAAAAAAGAAAAGAAAATTAATAGAAAATGGTGAGAGGAAAAGTAGAAATGAAAAGGATAGAAAATGCGACAAGTCGACAGGTAACATTCTCAAAGCGTAGAAATGGACTGTTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCAGTCATCATTTTCTCACAAAAAGGCCGTCTCTATGAATTTGCAAGCTCTGAATTTTCTGGAAATTTTAATCATTTGCCCCCACCTCTAAGGTTCCATAGGAGTAAATATAAGCATGATAGGGTTTATAGGATGCCGAGAATTGTAGAGCGCTATCGCAAATGTTCAAGAGATGGGAAAAACTGTACCAAATTTGATAGACAACTACAATTACAGCAATTAAGGCTTGAAGCTGAAAGCATTAATAAGAAGATGGAGTTGATGCAACTTTCTCACAGGAAGCTGTTAGGATATGGACTGGATTCTTGTTCTCTTGATGAACTTCAACTACTTGATGCTCAGCTTCAACGAAGCCTGTTCCAAATTAGAGCCAGAAAGGCTCAGCTATACAAGGAGCAGATACAACAATTACAAGAAAAGGAAAGACTCCTTTCAGAAGAAAACAGGAAATTGTCTTTAAAGATGGAGCTAAAACTAAGTTGGATGGGCCTAGAACGTCTGAAGCATAGTAGTGATAAACATGGAAGTGATGGTGGTGAGATGTTCTTTTTTGGTTTGAACATATCTTGGAGGCAAATCCGGTCGCCCACCGTTAAAGTCCGCAACTTGTCCAGCGCTTGCCCCTCAACGCGGTTAAAGGAGTCAAAAGAGTTTCTTGCACGCTACCTTCTTCTTCTCGCCGCAGCTCACGGTGTTGCCACCACGTACGGCTGCCGGAGAAGCCCTAGTTCGGCAGTCGACACCCAATTGGCAATTTGATCGTACGTGCATGCTACATATTCAACGTTACCCATACACAAAAAAGTTTTATTATATATAGTTTATAGTTCATTTTATTTCCCTTGTAATATTATTGTGATTTTTAATTGTTTATGGCACCAATAAACATCTTCCAAATTTATGTAATTTTGTGTTTTAACT

Coding sequence (CDS)

ATGGTGAGAGGAAAAGTAGAAATGAAAAGGATAGAAAATGCGACAAGTCGACAGGTAACATTCTCAAAGCGTAGAAATGGACTGTTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCAGTCATCATTTTCTCACAAAAAGGCCGTCTCTATGAATTTGCAAGCTCTGAATTTTCTGGAAATTTTAATCATTTGCCCCCACCTCTAAGGTTCCATAGGAGTAAATATAAGCATGATAGGGTTTATAGGATGCCGAGAATTGTAGAGCGCTATCGCAAATGTTCAAGAGATGGGAAAAACTGTACCAAATTTGATAGACAACTACAATTACAGCAATTAAGGCTTGAAGCTGAAAGCATTAATAAGAAGATGGAGTTGATGCAACTTTCTCACAGGAAGCTGTTAGGATATGGACTGGATTCTTGTTCTCTTGATGAACTTCAACTACTTGATGCTCAGCTTCAACGAAGCCTGTTCCAAATTAGAGCCAGAAAGGCTCAGCTATACAAGGAGCAGATACAACAATTACAAGAAAAGGAAAGACTCCTTTCAGAAGAAAACAGGAAATTGTCTTTAAAGATGGAGCTAAAACTAAGTTGGATGGGCCTAGAACGTCTGAAGCATAGTAGTGATAAACATGGAAGTGATGGTGGTGAGATGTTCTTTTTTGGTTTGAACATATCTTGGAGGCAAATCCGGTCGCCCACCGTTAAAGTCCGCAACTTGTCCAGCGCTTGCCCCTCAACGCGGTTAAAGGAGTCAAAAGAGTTTCTTGCACGCTACCTTCTTCTTCTCGCCGCAGCTCACGGTGTTGCCACCACGTACGGCTGCCGGAGAAGCCCTAGTTCGGCAGTCGACACCCAATTGGCAATTTGA

Protein sequence

MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASSEFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLEAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQLQEKERLLSEENRKLSLKMELKLSWMGLERLKHSSDKHGSDGGEMFFFGLNISWRQIRSPTVKVRNLSSACPSTRLKESKEFLARYLLLLAAAHGVATTYGCRRSPSSAVDTQLAI

Homology

[Close]

BLAST of Lsi05G012770 vs. ExPASy Swiss-Prot
Match: Q9FIS1 (MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.6e-46
Identity = 111/206 (53.88%), Postives = 145/206 (70.39%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++++IIFSQ+GRLYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          M + +ERYRK ++D +  +  D Q+ LQQL+ E
Sbjct: 61  D--------------------------MQKTIERYRKYTKDHET-SNHDSQIHLQQLKQE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           A  +  K+EL++   RKLLG G+ SCSL+ELQ +D+QLQRSL ++R RKAQL+KEQ+++L
Sbjct: 121 ASHMITKIELLEFHKRKLLGQGIASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKL 178

Query: 181 QEKERLLSEENRKLSLKMELKLSWMG 207
           + KE+ L EEN KL  K  +   W G
Sbjct: 181 KAKEKQLLEENVKLHQKNVIN-PWRG 178

[Close]

BLAST of Lsi05G012770 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.6e-41
Identity = 112/241 (46.47%), Postives = 154/241 (63.90%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK +MKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEV++IIFS KG+LYEFASS
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
                                      M   ++RY + ++D +  TK   +  +Q L+ E
Sbjct: 61  --------------------------NMQDTIDRYLRHTKD-RVSTKPVSEENMQHLKYE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           A ++ KK+E ++ S RKLLG G+ +CS++ELQ ++ QL++S+  IRARK Q++KEQI+QL
Sbjct: 121 AANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQL 180

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSS---DKHGSDGGEM---FFFGLNISWR 236
           ++KE+ L+ EN KLS K     S +   + + S+   D+  S   E+    F GL  S R
Sbjct: 181 KQKEKALAAENEKLSEKWGSHESEVWSNKNQESTGRGDEESSPSSEVETQLFIGLPCSSR 214

[Close]

BLAST of Lsi05G012770 vs. ExPASy Swiss-Prot
Match: Q9LT93 (MADS-box protein AGL71 OS=Arabidopsis thaliana OX=3702 GN=AGL71 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-40
Identity = 102/232 (43.97%), Postives = 150/232 (64.66%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK+E+K+IEN TSRQVTFSKRR+GL KKA+ELSVLCDA+VA I+FSQ GRL+E++SS
Sbjct: 1   MVRGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAIVFSQSGRLHEYSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          M +I++RY K S       +   +  LQ+L++E
Sbjct: 61  Q--------------------------MEKIIDRYGKFSNAFYVAERPQVERYLQELKME 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
            + + KK++L+++ HRKLLG GLDSCS+ ELQ +D Q+++SL  +R+RKA+LY +Q+++L
Sbjct: 121 IDRMVKKIDLLEVHHRKLLGQGLDSCSVTELQEIDTQIEKSLRIVRSRKAELYADQLKKL 180

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSSDKHGSDGGEMFFFGLNIS 233
           +EKER L  E ++L  ++ +  S  G     H + KH S+     F GL ++
Sbjct: 181 KEKERELLNERKRLLEEVNMHHSSKGNTEGGHRT-KHSSEVETDLFIGLPVT 205

[Close]

BLAST of Lsi05G012770 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39
Identity = 102/208 (49.04%), Postives = 135/208 (64.90%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEVA++IFS + +LYEF+SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERY-RKCSRDGKNCTKFDRQLQLQQLRL 120
             +                            +ERY R+    G N  + D     QQ R 
Sbjct: 61  SIAAT--------------------------IERYQRRIKEIGNNHKRNDNS---QQARD 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           E   + KK+E +++S RKLLG G+D+CS++ELQ L+ QL RSL +IRA+K QL +E+I++
Sbjct: 121 ETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEK 173

Query: 181 LQEKERLLSEENRKLSLKMELKLSWMGL 208
           L+ +ER L +EN+      +LK  W+G+
Sbjct: 181 LKAEERNLVKENK------DLKEKWLGM 173

[Close]

BLAST of Lsi05G012770 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 5.4e-39
Identity = 103/202 (50.99%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEVA+IIFS +G+LYEF+SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRD-GKNCTKFDRQLQLQQLRL 120
                                      +P+ VERY+K  +D G N  + D     QQ + 
Sbjct: 61  S-------------------------SIPKTVERYQKRIQDLGSNHKRNDNS---QQSKD 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           E   + +K+E +++S RK++G GLD+ S++ELQ L+ QL RSL +IRA+K QL +E+ ++
Sbjct: 121 ETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEK 174

Query: 181 LQEKERLLSEENRKLSLKMELK 202
           L+EKER L  EN+ L  K E++
Sbjct: 181 LKEKERNLIAENKMLMEKCEMQ 174

[Close]

BLAST of Lsi05G012770 vs. ExPASy TrEMBL
Match: A0A1S3AXN7 (MADS-box protein AGL42-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484032 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 156/202 (77.23%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNG+LKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGVLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRD-GKNCTKFDRQLQLQQLRL 120
           E                          MP+I++RYRKC+ D   N TKFDRQLQLQQ RL
Sbjct: 61  E--------------------------MPKIMDRYRKCTIDANNNNTKFDRQLQLQQSRL 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           EAESINKKMELMQLSH KLLGYGLD+CSLDELQ+LDAQLQRSLFQIRARKAQLYKEQIQQ
Sbjct: 121 EAESINKKMELMQLSHGKLLGYGLDNCSLDELQVLDAQLQRSLFQIRARKAQLYKEQIQQ 176

Query: 181 LQEKERLLSEENRKLSLKMELK 202
           LQEKE+LL EENR LSLK   K
Sbjct: 181 LQEKEKLLWEENRILSLKAAAK 176

[Close]

BLAST of Lsi05G012770 vs. ExPASy TrEMBL
Match: A0A1S3AYR2 (MADS-box protein AGL42-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484032 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 155/198 (78.28%), Postives = 163/198 (82.32%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNG+LKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGVLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRD-GKNCTKFDRQLQLQQLRL 120
           E                          MP+I++RYRKC+ D   N TKFDRQLQLQQ RL
Sbjct: 61  E--------------------------MPKIMDRYRKCTIDANNNNTKFDRQLQLQQSRL 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           EAESINKKMELMQLSH KLLGYGLD+CSLDELQ+LDAQLQRSLFQIRARKAQLYKEQIQQ
Sbjct: 121 EAESINKKMELMQLSHGKLLGYGLDNCSLDELQVLDAQLQRSLFQIRARKAQLYKEQIQQ 172

Query: 181 LQEKERLLSEENRKLSLK 198
           LQEKE+LL EENR LSLK
Sbjct: 181 LQEKEKLLWEENRILSLK 172

[Close]

BLAST of Lsi05G012770 vs. ExPASy TrEMBL
Match: A0A6J1CGY1 (MADS-box protein AGL42-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011422 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 6.6e-64
Identity = 162/295 (54.92%), Postives = 180/295 (61.02%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDA++AVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQIAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          + RIVERYRKC+RDGKN +K D+QLQLQ+L+ E
Sbjct: 61  D--------------------------IQRIVERYRKCARDGKNNSKIDKQLQLQELKNE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           AESI++K+EL+QLS RKLLGYGLDSCSLDELQ +DAQLQRSLF IRARKAQLYKEQI+QL
Sbjct: 121 AESISEKIELVQLSQRKLLGYGLDSCSLDELQEIDAQLQRSLFLIRARKAQLYKEQIEQL 180

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSSDKHGSDGGEMFFFGLNISWRQIRSPT 240
           +EKERLL E+N +LSLK                                           
Sbjct: 181 KEKERLLLEKNARLSLK------------------------------------------- 197

Query: 241 VKVRNLSSACPSTRLKESKEFLARYLLLLAAAHGVATTYGCRRSPSSAVDTQLAI 296
                                        AAAHG A   GCR SPS  VDTQL I
Sbjct: 241 -----------------------------AAAHGGAAALGCRSSPSCEVDTQLFI 197

[Close]

BLAST of Lsi05G012770 vs. ExPASy TrEMBL
Match: A0A6J1CIY9 (MADS-box protein AGL42-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011422 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 6.6e-64
Identity = 162/295 (54.92%), Postives = 180/295 (61.02%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDA++AVIIFSQKGRLYEFASS
Sbjct: 4   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQIAVIIFSQKGRLYEFASS 63

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          + RIVERYRKC+RDGKN +K D+QLQLQ+L+ E
Sbjct: 64  D--------------------------IQRIVERYRKCARDGKNNSKIDKQLQLQELKNE 123

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           AESI++K+EL+QLS RKLLGYGLDSCSLDELQ +DAQLQRSLF IRARKAQLYKEQI+QL
Sbjct: 124 AESISEKIELVQLSQRKLLGYGLDSCSLDELQEIDAQLQRSLFLIRARKAQLYKEQIEQL 183

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSSDKHGSDGGEMFFFGLNISWRQIRSPT 240
           +EKERLL E+N +LSLK                                           
Sbjct: 184 KEKERLLLEKNARLSLK------------------------------------------- 200

Query: 241 VKVRNLSSACPSTRLKESKEFLARYLLLLAAAHGVATTYGCRRSPSSAVDTQLAI 296
                                        AAAHG A   GCR SPS  VDTQL I
Sbjct: 244 -----------------------------AAAHGGAAALGCRSSPSCEVDTQLFI 200

[Close]

BLAST of Lsi05G012770 vs. ExPASy TrEMBL
Match: A0A5D2N561 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G011000v1 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.6e-44
Identity = 114/198 (57.58%), Postives = 138/198 (69.70%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK++MKRIENATSRQVTFSKRRNGLLKKAYEL VLCDAEVAVIIFS KG+LYEF+SS
Sbjct: 1   MVRGKIQMKRIENATSRQVTFSKRRNGLLKKAYELYVLCDAEVAVIIFSHKGKLYEFSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRD-GKNCTKFDRQLQLQQLRL 120
           +                          M   +ERYR+  +D   N  +FDR    QQLRL
Sbjct: 61  D-------------------------NMQNTIERYRQYKKDVQSNIPEFDR--YTQQLRL 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           EAE++ KK+E +++S R++LG  L SCS+DELQ ++ QL+RSL  IRARK  L+KEQI Q
Sbjct: 121 EAENMAKKIEFLEVSKRRMLGQNLGSCSIDELQEVENQLERSLRNIRARKGYLFKEQILQ 171

Query: 181 LQEKERLLSEENRKLSLK 198
           L+ KER + EEN KLS K
Sbjct: 181 LKAKERYMQEENAKLSAK 171

[Close]

BLAST of Lsi05G012770 vs. NCBI nr
Match: XP_038883063.1 (MADS-box protein AGL42-like isoform X1 [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-73
Identity = 177/295 (60.00%), Postives = 188/295 (63.73%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           E                          MPRIVERYRKC+RD KN TKFDRQLQLQQ R+E
Sbjct: 61  E--------------------------MPRIVERYRKCARDAKNNTKFDRQLQLQQSRVE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           AESINKKMEL+QLSHRKLLGYGLDSCSLDELQ+LDAQLQRSLFQIRARKAQLYKEQ+QQL
Sbjct: 121 AESINKKMELLQLSHRKLLGYGLDSCSLDELQVLDAQLQRSLFQIRARKAQLYKEQLQQL 180

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSSDKHGSDGGEMFFFGLNISWRQIRSPT 240
           QEKERLLSEE +KLSLK+                                          
Sbjct: 181 QEKERLLSEEKKKLSLKV------------------------------------------ 197

Query: 241 VKVRNLSSACPSTRLKESKEFLARYLLLLAAAHGVATTYGCRRSPSSAVDTQLAI 296
                                          AHG A  +GCRRSP+S V+TQL+I
Sbjct: 241 ------------------------------TAHGAAAMHGCRRSPTSVVNTQLSI 197

[Close]

BLAST of Lsi05G012770 vs. NCBI nr
Match: XP_038883070.1 (MADS-box protein AGL42-like isoform X2 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 1.0e-71
Identity = 176/295 (59.66%), Postives = 187/295 (63.39%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           E                          MPRIVERYRKC+RD KN TKFDRQLQLQ  R+E
Sbjct: 61  E--------------------------MPRIVERYRKCARDAKNNTKFDRQLQLQS-RVE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           AESINKKMEL+QLSHRKLLGYGLDSCSLDELQ+LDAQLQRSLFQIRARKAQLYKEQ+QQL
Sbjct: 121 AESINKKMELLQLSHRKLLGYGLDSCSLDELQVLDAQLQRSLFQIRARKAQLYKEQLQQL 180

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSSDKHGSDGGEMFFFGLNISWRQIRSPT 240
           QEKERLLSEE +KLSLK+                                          
Sbjct: 181 QEKERLLSEEKKKLSLKV------------------------------------------ 196

Query: 241 VKVRNLSSACPSTRLKESKEFLARYLLLLAAAHGVATTYGCRRSPSSAVDTQLAI 296
                                          AHG A  +GCRRSP+S V+TQL+I
Sbjct: 241 ------------------------------TAHGAAAMHGCRRSPTSVVNTQLSI 196

[Close]

BLAST of Lsi05G012770 vs. NCBI nr
Match: XP_008439148.1 (PREDICTED: MADS-box protein AGL42-like isoform X1 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 2.7e-67
Identity = 155/198 (78.28%), Postives = 163/198 (82.32%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNG+LKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGVLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRD-GKNCTKFDRQLQLQQLRL 120
           E                          MP+I++RYRKC+ D   N TKFDRQLQLQQ RL
Sbjct: 61  E--------------------------MPKIMDRYRKCTIDANNNNTKFDRQLQLQQSRL 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           EAESINKKMELMQLSH KLLGYGLD+CSLDELQ+LDAQLQRSLFQIRARKAQLYKEQIQQ
Sbjct: 121 EAESINKKMELMQLSHGKLLGYGLDNCSLDELQVLDAQLQRSLFQIRARKAQLYKEQIQQ 172

Query: 181 LQEKERLLSEENRKLSLK 198
           LQEKE+LL EENR LSLK
Sbjct: 181 LQEKEKLLWEENRILSLK 172

[Close]

BLAST of Lsi05G012770 vs. NCBI nr
Match: XP_008439149.1 (PREDICTED: MADS-box protein AGL42-like isoform X2 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 2.7e-67
Identity = 156/202 (77.23%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNG+LKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGVLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRD-GKNCTKFDRQLQLQQLRL 120
           E                          MP+I++RYRKC+ D   N TKFDRQLQLQQ RL
Sbjct: 61  E--------------------------MPKIMDRYRKCTIDANNNNTKFDRQLQLQQSRL 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           EAESINKKMELMQLSH KLLGYGLD+CSLDELQ+LDAQLQRSLFQIRARKAQLYKEQIQQ
Sbjct: 121 EAESINKKMELMQLSHGKLLGYGLDNCSLDELQVLDAQLQRSLFQIRARKAQLYKEQIQQ 176

Query: 181 LQEKERLLSEENRKLSLKMELK 202
           LQEKE+LL EENR LSLK   K
Sbjct: 181 LQEKEKLLWEENRILSLKAAAK 176

[Close]

BLAST of Lsi05G012770 vs. NCBI nr
Match: XP_004150307.1 (MADS-box protein AGL42 isoform X1 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 5.0e-66
Identity = 152/202 (75.25%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGKVEMKRIENATSRQVTFSKRRNG+LKKAYELSVLCDAE+AVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGVLKKAYELSVLCDAEIAVIIFSQKGRLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGK-NCTKFDRQLQLQQLRL 120
           E                          MP+I++RYRKC++D K N TKFDRQL LQQLRL
Sbjct: 61  E--------------------------MPKIMDRYRKCTKDAKNNDTKFDRQL-LQQLRL 120

Query: 121 EAESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQ 180
           E ESINK+MELM+LSHRKLLGYGLD+CSLDEL++LDAQLQRSLFQIRARKAQLY EQIQQ
Sbjct: 121 EVESINKQMELMRLSHRKLLGYGLDNCSLDELEVLDAQLQRSLFQIRARKAQLYNEQIQQ 175

Query: 181 LQEKERLLSEENRKLSLKMELK 202
           LQEKE+LL EENR LSLK  +K
Sbjct: 181 LQEKEKLLLEENRILSLKAAVK 175

[Close]

BLAST of Lsi05G012770 vs. TAIR 10
Match: AT5G62165.1 (AGAMOUS-like 42 )

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-47
Identity = 111/206 (53.88%), Postives = 145/206 (70.39%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++++IIFSQ+GRLYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          M + +ERYRK ++D +  +  D Q+ LQQL+ E
Sbjct: 61  D--------------------------MQKTIERYRKYTKDHET-SNHDSQIHLQQLKQE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           A  +  K+EL++   RKLLG G+ SCSL+ELQ +D+QLQRSL ++R RKAQL+KEQ+++L
Sbjct: 121 ASHMITKIELLEFHKRKLLGQGIASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKL 178

Query: 181 QEKERLLSEENRKLSLKMELKLSWMG 207
           + KE+ L EEN KL  K  +   W G
Sbjct: 181 KAKEKQLLEENVKLHQKNVIN-PWRG 178

[Close]

BLAST of Lsi05G012770 vs. TAIR 10
Match: AT5G62165.2 (AGAMOUS-like 42 )

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-47
Identity = 111/206 (53.88%), Postives = 145/206 (70.39%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++++IIFSQ+GRLYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          M + +ERYRK ++D +  +  D Q+ LQQL+ E
Sbjct: 61  D--------------------------MQKTIERYRKYTKDHET-SNHDSQIHLQQLKQE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           A  +  K+EL++   RKLLG G+ SCSL+ELQ +D+QLQRSL ++R RKAQL+KEQ+++L
Sbjct: 121 ASHMITKIELLEFHKRKLLGQGIASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKL 178

Query: 181 QEKERLLSEENRKLSLKMELKLSWMG 207
           + KE+ L EEN KL  K  +   W G
Sbjct: 181 KAKEKQLLEENVKLHQKNVIN-PWRG 178

[Close]

BLAST of Lsi05G012770 vs. TAIR 10
Match: AT5G62165.3 (AGAMOUS-like 42 )

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-47
Identity = 111/206 (53.88%), Postives = 145/206 (70.39%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++++IIFSQ+GRLYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          M + +ERYRK ++D +  +  D Q+ LQQL+ E
Sbjct: 61  D--------------------------MQKTIERYRKYTKDHET-SNHDSQIHLQQLKQE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           A  +  K+EL++   RKLLG G+ SCSL+ELQ +D+QLQRSL ++R RKAQL+KEQ+++L
Sbjct: 121 ASHMITKIELLEFHKRKLLGQGIASCSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKL 178

Query: 181 QEKERLLSEENRKLSLKMELKLSWMG 207
           + KE+ L EEN KL  K  +   W G
Sbjct: 181 KAKEKQLLEENVKLHQKNVIN-PWRG 178

[Close]

BLAST of Lsi05G012770 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 169.1 bits (427), Expect = 5.4e-42
Identity = 112/241 (46.47%), Postives = 154/241 (63.90%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK +MKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEV++IIFS KG+LYEFASS
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
                                      M   ++RY + ++D +  TK   +  +Q L+ E
Sbjct: 61  --------------------------NMQDTIDRYLRHTKD-RVSTKPVSEENMQHLKYE 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
           A ++ KK+E ++ S RKLLG G+ +CS++ELQ ++ QL++S+  IRARK Q++KEQI+QL
Sbjct: 121 AANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQL 180

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSS---DKHGSDGGEM---FFFGLNISWR 236
           ++KE+ L+ EN KLS K     S +   + + S+   D+  S   E+    F GL  S R
Sbjct: 181 KQKEKALAAENEKLSEKWGSHESEVWSNKNQESTGRGDEESSPSSEVETQLFIGLPCSSR 214

[Close]

BLAST of Lsi05G012770 vs. TAIR 10
Match: AT5G51870.1 (AGAMOUS-like 71 )

HSP 1 Score: 168.3 bits (425), Expect = 9.2e-42
Identity = 102/232 (43.97%), Postives = 150/232 (64.66%), Query Frame = 0


Query: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60
           MVRGK+E+K+IEN TSRQVTFSKRR+GL KKA+ELSVLCDA+VA I+FSQ GRL+E++SS
Sbjct: 1   MVRGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAIVFSQSGRLHEYSSS 60

Query: 61  EFSGNFNHLPPPLRFHRSKYKHDRVYRMPRIVERYRKCSRDGKNCTKFDRQLQLQQLRLE 120
           +                          M +I++RY K S       +   +  LQ+L++E
Sbjct: 61  Q--------------------------MEKIIDRYGKFSNAFYVAERPQVERYLQELKME 120

Query: 121 AESINKKMELMQLSHRKLLGYGLDSCSLDELQLLDAQLQRSLFQIRARKAQLYKEQIQQL 180
            + + KK++L+++ HRKLLG GLDSCS+ ELQ +D Q+++SL  +R+RKA+LY +Q+++L
Sbjct: 121 IDRMVKKIDLLEVHHRKLLGQGLDSCSVTELQEIDTQIEKSLRIVRSRKAELYADQLKKL 180

Query: 181 QEKERLLSEENRKLSLKMELKLSWMGLERLKHSSDKHGSDGGEMFFFGLNIS 233
           +EKER L  E ++L  ++ +  S  G     H + KH S+     F GL ++
Sbjct: 181 KEKERELLNERKRLLEEVNMHHSSKGNTEGGHRT-KHSSEVETDLFIGLPVT 205

The following BLAST results are available for this feature:

BLAST of Lsi05G012770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIS1	4.6e-46	53.88	MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1	[more]
O64645	7.6e-41	46.47	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]
Q9LT93	1.3e-40	43.97	MADS-box protein AGL71 OS=Arabidopsis thaliana OX=3702 GN=AGL71 PE=2 SV=1	[more]
O82743	1.9e-39	49.04	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=...	[more]
Q38838	5.4e-39	50.99	Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=...	[more]

BLAST of Lsi05G012770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AXN7	1.3e-67	77.23	MADS-box protein AGL42-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484032 P...	[more]
A0A1S3AYR2	1.3e-67	78.28	MADS-box protein AGL42-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484032 P...	[more]
A0A6J1CGY1	6.6e-64	54.92	MADS-box protein AGL42-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1CIY9	6.6e-64	54.92	MADS-box protein AGL42-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D2N561	7.6e-44	57.58	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G011000v1 P...	[more]

BLAST of Lsi05G012770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883063.1	1.9e-73	60.00	MADS-box protein AGL42-like isoform X1 [Benincasa hispida]	[more]
XP_038883070.1	1.0e-71	59.66	MADS-box protein AGL42-like isoform X2 [Benincasa hispida]	[more]
XP_008439148.1	2.7e-67	78.28	PREDICTED: MADS-box protein AGL42-like isoform X1 [Cucumis melo]	[more]
XP_008439149.1	2.7e-67	77.23	PREDICTED: MADS-box protein AGL42-like isoform X2 [Cucumis melo]	[more]
XP_004150307.1	5.0e-66	75.25	MADS-box protein AGL42 isoform X1 [Cucumis sativus]	[more]

BLAST of Lsi05G012770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62165.1	3.3e-47	53.88	AGAMOUS-like 42	[more]
AT5G62165.2	3.3e-47	53.88	AGAMOUS-like 42	[more]
AT5G62165.3	3.3e-47	53.88	AGAMOUS-like 42	[more]
AT2G45660.1	5.4e-42	46.47	AGAMOUS-like 20	[more]
AT5G51870.1	9.2e-42	43.97	AGAMOUS-like 71	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	COILS	Coil	Coil	coord: 170..197
None	No IPR available	PANTHER	PTHR11945:SF341	MADS-BOX PROTEIN SOC1	coord: 1..63
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..63
None	No IPR available	PANTHER	PTHR11945:SF341	MADS-BOX PROTEIN SOC1	coord: 87..209
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 87..209
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 86.34 coord: 38..59 score: 61.64 coord: 3..23 score: 68.28
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.0E-41 score: 154.6
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 7.5E-27 score: 92.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 32.576035
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..116 e-value: 1.6E-25 score: 91.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 3..84
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 112..198 e-value: 2.0E-20 score: 72.7
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 114..208 score: 14.047231
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 3..104 e-value: 7.78717E-38 score: 126.898

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G012770.1	Lsi05G012770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009838	abscission
biological_process	GO:0080187	floral organ senescence
biological_process	GO:0010150	leaf senescence
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding