Lsi02G016340 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G016340
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Actin
Location	chr02: 22218446 .. 22220942 (-)
RNA-Seq Expression	Lsi02G016340
Synteny	Lsi02G016340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTCTCTCCTCGCTCCCACTCCCGCTGCTCTCCTTCCACATTTTTCAAAGGTTTATTCCATTCCTTTGCTTCCCCATTAACAACCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCTCATTACCCATCTCCTTATCTCGGTATTCTTCTTCTTTCTTTTCTTTTTTCTCAACCAATAACTAATACCCTGTTTTCTTTATGAGGATCCATTAATTTCATTGCTAATGTATGAACCATGGATAAGAAATCTATCTAAAGAACAACATATAACATTCTCTCGCTCCTGAAATCTTGTCATTTCCATTGTGTTATGTGTCTTTTTCAGTACCAAAGTGCTGTGGGGGCGTGGGCCATTTGAAGATAGAAAGTGTATTGGCTTTCCTAAATGTTTAGGCACACTTTTAGCAATTGGCTTATTTGTTGTCCCTAGAAAAATAGTCACAACCATTTGTTTTGTGGGTTGCACTTTTGTATGTGTCTATGGTTTTGTGAATTACCCTTGTTACTACAATTGGATCTTCTAGACATTTTGTGGCAGTGGGCAGAGTTTGATATTCATGATCATGTCTCAGAATTGTTTTGTTCTGTGTTTTCCCATGGTCCTTCATTTACTTTGCAGTTATTGCAAACAGCCCATTTGAAATGACTTTCTTAAGAAGCACTTGAAATGTCATTCCAAATAATATTCCAAATATTTACCATTGGATTTTAGCATCCCAATGATAGATTGGTTGGGAGTGATGTTGAAATGGTTAAAATCACTATAAAACATGTTTTTAATCATTCAAAATCAATTTTGATGATATGAAAATTGCATTTGAAAGTGTAAAATTATTTTGAATGATTAAAGTCGTGTTTCGAAATTAATTTTAAACATGAAAAAAGTGATTTTAACAATTCCAAAAATATTTCCAAACATGCACTGCATGCTACTTCTCCCAACTAATAGCAACTTCTCTAACAGGTATAAAAGATGGCAGATGCAGAGGACATTCAGCCTCTTGTGTGCGATAATGGAACAGGAATGGTTAAGGTATTCTTTTCTAAAAGACAAAAAAAAAAAAAAAAAACTCAGCCTTTTCTCTTCTGTAATAGACTTTGTGGCGAATTATATTATATGTATGGTTAATAGTAATACCTCTTCTTGTTTGTGCTATTGTTTTAGGCTGGATTTGCTGGGGATGATGCTCCCCGGGCAGTCTTCCCTAGCATTGTCGGCCGTCCTCGTCACACCGGTGTGATGGTTGGCATGGGCCAGAAAGATGCTTATGTTGGCGATGAAGCTCAATCCAAGCGTGGTATTTTGACCCTGAAATACCCAATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATATGGCATCACACATTCTATAACGAGCTTCGGGTCGCTCCAGAGGAGCATCCTGTACTCCTAACTGAGGCTCCTCTTAACCCCAAGGCTAACCGTGAAAAGATGACCCAAATCATGTTTGAGACCTTTAACACCCCTGCCATGTATGTAGCTATTCAAGCTGTCCTCTCACTGTATGCCAGTGGTCGAACCACCGGTAAGCCTTGTAAAATTTTGAAGACTGAATTAAGTTTGATTGTCTTACCACCGTAATTAAGATTTGAAATGATTTCAAGGAGTTGATATGTTGTTAGGCTACCAGATTGGTATATTAGGACATTATTCTTCTTCTCACAGGGGTTGTTGTCTATTATGTAGGCATTGTGTTGGACTCTGGAGATGGTGTCAGTCATACAGTCCCCATCTATGAGGGTTATGCTCTTCCACACGCCATTCTTCGACTCGACCTTGCTGGCCGTGATCTTACTGATAACTTGATGAAGATTCTCACGGAGCGTGGTTATTCATTCACCACTACAGCAGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGCTTTCATATATCGCCCTTGACTATGAGCAAGAGCTTGAAACATCCAAAACCAGCTCAACAGTTGAAAAGAGCTATGAGTTGCCTGATGGACAAGTCATCACAATTGGCGCTGAGCGTTTTAGATGCCCGGAAGTTCTTTTCCAGCCATCCATGATCGGAATGGAAGCTGCAGGTATTCATGAAACCACATATAATTCCATCATGAAGTGCGACGTGGATATCAGGAAGGATTTGTATGGCAACATTGTCCTATCTGGTGGTTCGACCATGTTTTCGGGCATTGCCGATAGAATGAGTAAGGAAATCTCTGCATTGGCTCCAAGCAGCATGAAGATCAAGGTGGTGGCACCTCCAGAGAGAAAATACAGTGTCTGGATTGGTGGTTCTATCTTGGCTTCTCTGAGTACCTTCCAGCAGGTTGATATTATTAAGAGACCACCCTTCACAAAATGCTTTCAAGTTTTGCTTTCCCTTAATTTTTTTATACTTATCGCTGTCTTGTTTCTTTTCCTGCAGATGTGGATTGCAAAGGCAGAGTATGATGAATCTGGGCCATCAATTGTGCACAGGAAATGCTTCTAA

mRNA sequence

GCCTCTCTCCTCGCTCCCACTCCCGCTGCTCTCCTTCCACATTTTTCAAAGGTATAAAAGATGGCAGATGCAGAGGACATTCAGCCTCTTGTGTGCGATAATGGAACAGGAATGGTTAAGGCTGGATTTGCTGGGGATGATGCTCCCCGGGCAGTCTTCCCTAGCATTGTCGGCCGTCCTCGTCACACCGGTGTGATGGTTGGCATGGGCCAGAAAGATGCTTATGTTGGCGATGAAGCTCAATCCAAGCGTGGTATTTTGACCCTGAAATACCCAATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATATGGCATCACACATTCTATAACGAGCTTCGGGTCGCTCCAGAGGAGCATCCTGTACTCCTAACTGAGGCTCCTCTTAACCCCAAGGCTAACCGTGAAAAGATGACCCAAATCATGTTTGAGACCTTTAACACCCCTGCCATGTATGTAGCTATTCAAGCTGTCCTCTCACTGTATGCCAGTGGTCGAACCACCGGGGTTGTTGTCTATTATGTAGGCATTGTGTTGGACTCTGGAGATGGTGTCAGTCATACAGTCCCCATCTATGAGGGTTATGCTCTTCCACACGCCATTCTTCGACTCGACCTTGCTGGCCGTGATCTTACTGATAACTTGATGAAGATTCTCACGGAGCGTGGTTATTCATTCACCACTACAGCAGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGCTTTCATATATCGCCCTTGACTATGAGCAAGAGCTTGAAACATCCAAAACCAGCTCAACAGTTGAAAAGAGCTATGAGTTGCCTGATGGACAAGTCATCACAATTGGCGCTGAGCGTTTTAGATGCCCGGAAGTTCTTTTCCAGCCATCCATGATCGGAATGGAAGCTGCAGGTATTCATGAAACCACATATAATTCCATCATGAAGTGCGACGTGGATATCAGGAAGGATTTGTATGGCAACATTGTCCTATCTGGTGGTTCGACCATGTTTTCGGGCATTGCCGATAGAATGAGTAAGGAAATCTCTGCATTGGCTCCAAGCAGCATGAAGATCAAGGTGGTGGCACCTCCAGAGAGAAAATACAGTGTCTGGATTGGTGGTTCTATCTTGGCTTCTCTGAGTACCTTCCAGCAGATGTGGATTGCAAAGGCAGAGTATGATGAATCTGGGCCATCAATTGTGCACAGGAAATGCTTCTAA

Coding sequence (CDS)

ATGGCAGATGCAGAGGACATTCAGCCTCTTGTGTGCGATAATGGAACAGGAATGGTTAAGGCTGGATTTGCTGGGGATGATGCTCCCCGGGCAGTCTTCCCTAGCATTGTCGGCCGTCCTCGTCACACCGGTGTGATGGTTGGCATGGGCCAGAAAGATGCTTATGTTGGCGATGAAGCTCAATCCAAGCGTGGTATTTTGACCCTGAAATACCCAATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATATGGCATCACACATTCTATAACGAGCTTCGGGTCGCTCCAGAGGAGCATCCTGTACTCCTAACTGAGGCTCCTCTTAACCCCAAGGCTAACCGTGAAAAGATGACCCAAATCATGTTTGAGACCTTTAACACCCCTGCCATGTATGTAGCTATTCAAGCTGTCCTCTCACTGTATGCCAGTGGTCGAACCACCGGGGTTGTTGTCTATTATGTAGGCATTGTGTTGGACTCTGGAGATGGTGTCAGTCATACAGTCCCCATCTATGAGGGTTATGCTCTTCCACACGCCATTCTTCGACTCGACCTTGCTGGCCGTGATCTTACTGATAACTTGATGAAGATTCTCACGGAGCGTGGTTATTCATTCACCACTACAGCAGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGCTTTCATATATCGCCCTTGACTATGAGCAAGAGCTTGAAACATCCAAAACCAGCTCAACAGTTGAAAAGAGCTATGAGTTGCCTGATGGACAAGTCATCACAATTGGCGCTGAGCGTTTTAGATGCCCGGAAGTTCTTTTCCAGCCATCCATGATCGGAATGGAAGCTGCAGGTATTCATGAAACCACATATAATTCCATCATGAAGTGCGACGTGGATATCAGGAAGGATTTGTATGGCAACATTGTCCTATCTGGTGGTTCGACCATGTTTTCGGGCATTGCCGATAGAATGAGTAAGGAAATCTCTGCATTGGCTCCAAGCAGCATGAAGATCAAGGTGGTGGCACCTCCAGAGAGAAAATACAGTGTCTGGATTGGTGGTTCTATCTTGGCTTCTCTGAGTACCTTCCAGCAGATGTGGATTGCAAAGGCAGAGTATGATGAATCTGGGCCATCAATTGTGCACAGGAAATGCTTCTAA

Protein sequence

MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF

Homology

[Close]

BLAST of Lsi02G016340 vs. ExPASy Swiss-Prot
Match: A2XLF2 (Actin-1 OS=Oryza sativa subsp. indica OX=39946 GN=ACT1 PE=2 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 2.4e-212
Identity = 368/384 (95.83%), Postives = 374/384 (97.40%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKLSYIALDY+QE+ET+K
Sbjct: 181 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy Swiss-Prot
Match: Q10DV7 (Actin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACT1 PE=2 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 2.4e-212
Identity = 368/384 (95.83%), Postives = 374/384 (97.40%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKLSYIALDY+QE+ET+K
Sbjct: 181 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy Swiss-Prot
Match: Q05214 (Actin OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 738.8 bits (1906), Expect = 3.1e-212
Identity = 368/384 (95.83%), Postives = 374/384 (97.40%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKLSYIALD+EQE+ETSK
Sbjct: 181 PHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFEQEMETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYG IVLSGGSTMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGKIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy Swiss-Prot
Match: P30171 (Actin-97 OS=Solanum tuberosum OX=4113 GN=AC97 PE=3 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 5.3e-212
Identity = 367/384 (95.57%), Postives = 375/384 (97.66%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH+GVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHSGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD+LMKILTERGYSFTT+AEREIVRD+KEKL+YIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy Swiss-Prot
Match: O81221 (Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 1.5e-211
Identity = 366/384 (95.31%), Postives = 373/384 (97.14%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS++EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy TrEMBL
Match: A0A5D3DGH4 (Actin-97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00460 PE=3 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 2.9e-213
Identity = 375/384 (97.66%), Postives = 377/384 (98.18%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy TrEMBL
Match: A0A0A0KU98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517100 PE=3 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 2.9e-213
Identity = 375/384 (97.66%), Postives = 377/384 (98.18%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy TrEMBL
Match: A0A6J1JY86 (actin-1 OS=Cucurbita maxima OX=3661 GN=LOC111488962 PE=3 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 6.5e-213
Identity = 374/384 (97.40%), Postives = 377/384 (98.18%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMF+GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFTGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy TrEMBL
Match: A0A6J1FHJ5 (actin-1 OS=Cucurbita moschata OX=3662 GN=LOC111445508 PE=3 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 6.5e-213
Identity = 374/384 (97.40%), Postives = 377/384 (98.18%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMF+GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFTGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. ExPASy TrEMBL
Match: A0A6J1JTI5 (actin OS=Cucurbita maxima OX=3661 GN=LOC111487712 PE=3 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 1.9e-212
Identity = 373/384 (97.14%), Postives = 376/384 (97.92%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMF+GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFTGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. NCBI nr
Match: XP_038889979.1 (actin-1-like [Benincasa hispida])

HSP 1 Score: 751.5 bits (1939), Expect = 3.5e-213
Identity = 376/384 (97.92%), Postives = 377/384 (98.18%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. NCBI nr
Match: XP_031741062.1 (actin-1 isoform X2 [Cucumis sativus] >KAA0037663.1 actin-97-like [Cucumis melo var. makuwa] >TYK22807.1 actin-97-like [Cucumis melo var. makuwa])

HSP 1 Score: 750.7 bits (1937), Expect = 6.0e-213
Identity = 375/384 (97.66%), Postives = 377/384 (98.18%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. NCBI nr
Match: XP_022939702.1 (actin-1 [Cucurbita moschata] >XP_022992699.1 actin-1 [Cucurbita maxima] >XP_023551357.1 actin-1 [Cucurbita pepo subsp. pepo] >KAG7016234.1 Actin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 749.6 bits (1934), Expect = 1.3e-212
Identity = 374/384 (97.40%), Postives = 377/384 (98.18%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMF+GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFTGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. NCBI nr
Match: XP_022953206.1 (actin [Cucurbita moschata] >XP_022953213.1 actin [Cucurbita moschata] >XP_022953221.1 actin [Cucurbita moschata] >XP_022990981.1 actin [Cucurbita maxima] >XP_022990982.1 actin [Cucurbita maxima] >XP_022990984.1 actin [Cucurbita maxima] >XP_023523300.1 actin [Cucurbita pepo subsp. pepo] >XP_023523309.1 actin [Cucurbita pepo subsp. pepo] >XP_023523317.1 actin [Cucurbita pepo subsp. pepo] >XP_023523323.1 actin [Cucurbita pepo subsp. pepo] >XP_023523331.1 actin [Cucurbita pepo subsp. pepo] >KAG6602375.1 Actin-97, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033053.1 Actin-97 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 748.0 bits (1930), Expect = 3.9e-212
Identity = 373/384 (97.14%), Postives = 376/384 (97.92%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIV+DSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVMDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMF+GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFTGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. NCBI nr
Match: XP_022139116.1 (actin-like [Momordica charantia])

HSP 1 Score: 747.7 bits (1929), Expect = 5.1e-212
Identity = 373/384 (97.14%), Postives = 376/384 (97.92%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD+EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADSEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQE+ETSK
Sbjct: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQEIETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGGSTMF GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. TAIR 10
Match: AT3G46520.1 (actin-12 )

HSP 1 Score: 735.7 bits (1898), Expect = 1.9e-212
Identity = 366/384 (95.31%), Postives = 372/384 (96.88%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKS+ELPDGQVITIGAERFRCPEVLFQPSMIGME  GIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GI DRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. TAIR 10
Match: AT5G59370.1 (actin 4 )

HSP 1 Score: 734.2 bits (1894), Expect = 5.4e-212
Identity = 365/384 (95.05%), Postives = 372/384 (96.88%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRDMKEKLSYIALD+EQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKS+ELPDGQVITIGAERFRCPEVLFQPSMIGME  GIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GI DRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. TAIR 10
Match: AT5G59370.2 (actin 4 )

HSP 1 Score: 734.2 bits (1894), Expect = 5.4e-212
Identity = 365/384 (95.05%), Postives = 372/384 (96.88%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRDMKEKLSYIALD+EQELETSK
Sbjct: 181 PHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKS+ELPDGQVITIGAERFRCPEVLFQPSMIGME  GIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GI DRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. TAIR 10
Match: AT3G12110.1 (actin-11 )

HSP 1 Score: 731.5 bits (1887), Expect = 3.5e-211
Identity = 362/384 (94.27%), Postives = 372/384 (96.88%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKL+YIALDYEQE+ET+ 
Sbjct: 181 PHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETAN 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEKSYELPDGQVITIG ERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

[Close]

BLAST of Lsi02G016340 vs. TAIR 10
Match: AT2G37620.1 (actin 1 )

HSP 1 Score: 728.8 bits (1880), Expect = 2.3e-210
Identity = 361/384 (94.01%), Postives = 371/384 (96.61%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVVYYVGIVLDSGDGVSHTVPIYEGYAL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTT       GIVLDSGDGVSHTVPIYEGYAL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTT-------GIVLDSGDGVSHTVPIYEGYAL 180

Query: 181 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSK 240
           PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELET+K
Sbjct: 181 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAK 240

Query: 241 TSSTVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK 300
           TSS+VEK+YELPDGQVITIG+ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRK
Sbjct: 241 TSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRK 300

Query: 301 DLYGNIVLSGGSTMFSGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360
           DLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLST
Sbjct: 301 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 360

Query: 361 FQQMWIAKAEYDESGPSIVHRKCF 385
           FQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 361 FQQMWIAKAEYDESGPSIVHRKCF 377

The following BLAST results are available for this feature:

BLAST of Lsi02G016340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XLF2	2.4e-212	95.83	Actin-1 OS=Oryza sativa subsp. indica OX=39946 GN=ACT1 PE=2 SV=1	[more]
Q10DV7	2.4e-212	95.83	Actin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACT1 PE=2 SV=1	[more]
Q05214	3.1e-212	95.83	Actin OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P30171	5.3e-212	95.57	Actin-97 OS=Solanum tuberosum OX=4113 GN=AC97 PE=3 SV=1	[more]
O81221	1.5e-211	95.31	Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]

BLAST of Lsi02G016340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGH4	2.9e-213	97.66	Actin-97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00460 ...	[more]
A0A0A0KU98	2.9e-213	97.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517100 PE=3 SV=1	[more]
A0A6J1JY86	6.5e-213	97.40	actin-1 OS=Cucurbita maxima OX=3661 GN=LOC111488962 PE=3 SV=1	[more]
A0A6J1FHJ5	6.5e-213	97.40	actin-1 OS=Cucurbita moschata OX=3662 GN=LOC111445508 PE=3 SV=1	[more]
A0A6J1JTI5	1.9e-212	97.14	actin OS=Cucurbita maxima OX=3661 GN=LOC111487712 PE=3 SV=1	[more]

BLAST of Lsi02G016340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889979.1	3.5e-213	97.92	actin-1-like [Benincasa hispida]	[more]
XP_031741062.1	6.0e-213	97.66	actin-1 isoform X2 [Cucumis sativus] >KAA0037663.1 actin-97-like [Cucumis melo v...	[more]
XP_022939702.1	1.3e-212	97.40	actin-1 [Cucurbita moschata] >XP_022992699.1 actin-1 [Cucurbita maxima] >XP_0235...	[more]
XP_022953206.1	3.9e-212	97.14	actin [Cucurbita moschata] >XP_022953213.1 actin [Cucurbita moschata] >XP_022953...	[more]
XP_022139116.1	5.1e-212	97.14	actin-like [Momordica charantia]	[more]

BLAST of Lsi02G016340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46520.1	1.9e-212	95.31	actin-12	[more]
AT5G59370.1	5.4e-212	95.05	actin 4	[more]
AT5G59370.2	5.4e-212	95.05	actin 4	[more]
AT3G12110.1	3.5e-211	94.27	actin-11	[more]
AT2G37620.1	2.3e-210	94.01	actin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004000	Actin family	PRINTS	PR00190	ACTIN	coord: 63..85 score: 92.06 coord: 142..161 score: 64.17 coord: 28..37 score: 96.55 coord: 51..62 score: 89.2 coord: 245..261 score: 84.94 coord: 117..130 score: 97.31
IPR004000	Actin family	SMART	SM00268	actin_3	coord: 7..384 e-value: 1.7E-229 score: 778.4
IPR004000	Actin family	PFAM	PF00022	Actin	coord: 5..384 e-value: 1.3E-143 score: 478.3
IPR004000	Actin family	PANTHER	PTHR11937	ACTIN	coord: 1..383
None	No IPR available	GENE3D	3.90.640.10	Actin; Chain A, domain 4	coord: 189..280 e-value: 2.5E-180 score: 600.7
None	No IPR available	GENE3D	3.30.420.40		coord: 10..378 e-value: 2.5E-180 score: 600.7
None	No IPR available	GENE3D	3.30.420.40		coord: 140..347 e-value: 2.5E-180 score: 600.7
None	No IPR available	PANTHER	PTHR11937:SF442	ACTIN-97	coord: 1..383
None	No IPR available	CDD	cd00012	NBD_sugar-kinase_HSP70_actin	coord: 10..190 e-value: 2.18487E-15 score: 71.8511
IPR020902	Actin/actin-like conserved site	PROSITE	PS01132	ACTINS_ACT_LIKE	coord: 106..118
IPR004001	Actin, conserved site	PROSITE	PS00406	ACTINS_1	coord: 55..65
IPR004001	Actin, conserved site	PROSITE	PS00432	ACTINS_2	coord: 365..373
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 6..155
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 159..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G016340.1	Lsi02G016340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0005524	ATP binding