Lcy10g005360.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy10g005360.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ribonuclease H
Location	Chr10: 15466609 .. 15468388 (-)
Sequence length	606
RNA-Seq Expression	Lcy10g005360.1
Synteny	Lcy10g005360.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCCAAGGAGAAGCTTTTTGAGATTCTCCTCATTAACGGATATGTATTGATCAAGTACGCACAACAGGACCCTGTTCATGAGGAATACGATGATAATCTGACTTGCCTATTTCATGCTGGGGCAAAGGGACATTCTTTGGAACAATGTCATCATTTTCATAAAAGGGTCCAAGAACTGGTGGATTCAAAATTTCTTGTGGTTGCCCAAGCCCATCACCAAGATAATGAAATAGGCCCCGTGGAAGAATTGCTTCCTTAAGAAAATTTGAATCCATCTTTCAAACTGAAGCCACTCATGATCTATTACCATGAGAAGACTACTACTCATGATCCAAAGTCGATCACCATTCAAGTGTCGGCTCCTTTCAAATACAAGAGTTCCAAGGCAGTACCATGGAGTTATAAGTACAAAGTAACTATTAATTCAGAAACGCCACCACTTCCAGTTGACAACATTTCCGGAACGGAAGGCACAACATGGAGTGGGAAATGTTACACTCCAGCTCAATTATTGTAGTGCTCAAAGAATACAATAGAAGAGAAGAATGAGAAAGTTGAAAGTAATACAGATAGCAATGTCAAGCCGAAAGAAACAACAGTGATGAAGAAATCAAGGGGCAAACAGAATGTGTCCAAAGAAGAAACTCAAGAATTTTTAAAGTTGGTTAAACAAAGCGAATACAAAGTAGTGGAACAACTAGCTCAGACGTTTGCTAAGATTTCCATATTATCTTTGTTGTTATCCTCTGATTCGCATCGAGACACGATATTGGAAGCTTTGAATCAAGCATATGTTTCCAAAGACATCACTTCATATGGTCTAGATAATATCGTGGGGAATATAACTGCTCACAACACCATAACTTTCACTGATGATGAGATACTGCCCGAAGGCACTTCATATTTCAGTCAAGTGCAAGAACTTTTTAGTAGCAAAAGTCCTGGTGGATAATGGGTCTTCTTTGAACATAATGCCAAAATCAACGCTGGAAAGATTGCCAGTTGATATATCCCATATGAGACCAAGTACCGTAGTAGTAAGGGCCTTCGATGGGGCACACAGACAAGTGGTTGGTGACATTGAGATTCCAATACAAACCGGCCCATGCACATTTAACATAACCTTCCAAGTTATGGATATCCCCTCTGCTTACAGTTTCTTGTTAGGGCGGCCTTAGATACATTCTGCAGGAGCTGTCCCATCATCGCTGCACTAGAAGCTCAAATTTTCAATTGGAAAGAGCCTAGTAATTGTATCTGGTCTAAATGATATCTTGGTTTCTAGGCTAGCTGCAATGCCATATATTGATACATTAGAGGAAGCTTTTGAGTCATCGTTTCAAACATTTCAGGTAGCAAGTGCCACGACTCTATGTGGGCAAAGCAAGAAATCTAAATCTCGATCTTCAGTCATGACGTTCAAAGAAAGTAACAGTCATTTAGATGATGTTTTAAGCCAATCGAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCAGGATAAAGCAGACATGATCAGGGTACATAAGCGAGAAAAAGAGAGGCGTTTGGCTAGATTTGAAAGTCGCGAACCAGAATATGGAGAAAAAGTCAATCCTCATGTCTACCACTCGTTTGAAAGTGCTGGTATAATTCGTCTAAGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAAATAGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTACTATTGAATTACCGTCATTTGCTGTTAAGATGTCAAAGTAA

mRNA sequence

ATGACTCCCAAGGAGAAGCTTTTTGAGATTCTCCTCATTAACGGATATGTATTGATCAAGTACGCACAACAGGACCCTGTTCATGAGGAATACGATGATAATCTGACTTGCCTATTTCATGCTGGGGCAAAGGGACATTCTTTGGAACAATGTCATCATTTTCATAAAAGGGTCCAAGAACTGGTAGCAAGTGCCACGACTCTATGTGGGCAAAGCAAGAAATCTAAATCTCGATCTTCAGTCATGACGTTCAAAGAAAGTAACAGTCATTTAGATGATGTTTTAAGCCAATCGAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCAGGATAAAGCAGACATGATCAGGGTACATAAGCGAGAAAAAGAGAGGCGTTTGGCTAGATTTGAAAGTCGCGAACCAGAATATGGAGAAAAAGTCAATCCTCATGTCTACCACTCGTTTGAAAGTGCTGGTATAATTCGTCTAAGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAAATAGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTACTATTGAATTACCGTCATTTGCTGTTAAGATGTCAAAGTAA

Coding sequence (CDS)

ATGACTCCCAAGGAGAAGCTTTTTGAGATTCTCCTCATTAACGGATATGTATTGATCAAGTACGCACAACAGGACCCTGTTCATGAGGAATACGATGATAATCTGACTTGCCTATTTCATGCTGGGGCAAAGGGACATTCTTTGGAACAATGTCATCATTTTCATAAAAGGGTCCAAGAACTGGTAGCAAGTGCCACGACTCTATGTGGGCAAAGCAAGAAATCTAAATCTCGATCTTCAGTCATGACGTTCAAAGAAAGTAACAGTCATTTAGATGATGTTTTAAGCCAATCGAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCAGGATAAAGCAGACATGATCAGGGTACATAAGCGAGAAAAAGAGAGGCGTTTGGCTAGATTTGAAAGTCGCGAACCAGAATATGGAGAAAAAGTCAATCCTCATGTCTACCACTCGTTTGAAAGTGCTGGTATAATTCGTCTAAGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAAATAGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTACTATTGAATTACCGTCATTTGCTGTTAAGATGTCAAAGTAA

Protein sequence

MTPKEKLFEILLINGYVLIKYAQQDPVHEEYDDNLTCLFHAGAKGHSLEQCHHFHKRVQELVASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKREKERRLARFESREPEYGEKVNPHVYHSFESAGIIRLRDFAVAVVTKEEEIGPWIYPCPENFELNNWSTIELPSFAVKMSK

Homology

[Close]

BLAST of Lcy10g005360.1 vs. ExPASy TrEMBL
Match: A0A6J1D1K4 (uncharacterized protein LOC111016192 OS=Momordica charantia OX=3673 GN=LOC111016192 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.5e-27
Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
           +A+ATTL G+  + K R     FK  N+ LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 184 IANATTLHGKFGRPKPRLLETAFKGDNASLDKLLMMAKNTKKFGLGYKPSRGDIIRVWSL 243

Query: 122 EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRL---RDFAVAVVTKE-EEIGPWIYP 181
           EK +RL+RFE+ E +Y  +  P + HSF SAGII         VA VT+E E++GP++YP
Sbjct: 244 EKAKRLSRFENEERDYPRRTVPPLSHSFRSAGIIHQEYDESSVVAGVTEEREQVGPFVYP 303

Query: 182 CPENFELNNWSTIELPSF 196
           CP+ FEL+NWS +ELPSF
Sbjct: 304 CPDGFELSNWSVLELPSF 321

[Close]

BLAST of Lcy10g005360.1 vs. ExPASy TrEMBL
Match: A0A6J1DR66 (uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022791 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.9e-26
Identity = 68/138 (49.28%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
           + +ATTL G+  + KSR     FK  N  LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 393 IENATTLHGKFGRPKSRLLETAFKGDNESLDKLLRMAKNTKKFGLGYKLSRGDIIRVRSL 452

Query: 122 EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRL---RDFAVAVVTKE-EEIGPWIYP 181
           EK +RL+RFE+ E +Y  ++ P + HSF SAG I         VA VT+E E++GP++Y 
Sbjct: 453 EKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYL 512

Query: 182 CPENFELNNWSTIELPSF 196
           CP+ FEL+NWS IELPSF
Sbjct: 513 CPDGFELSNWSVIELPSF 530

[Close]

BLAST of Lcy10g005360.1 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25
Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 62   VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
            +A+ATTL G+  + K R     FK  N  LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 977  IANATTLHGKFGRPKPRLLETAFKGDNGSLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSL 1036

Query: 122  EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRL---RDFAVAVVTKE-EEIGPWIYP 181
            EK +RL+RFE+ E +Y  ++ P + HSF SAG I         VA VT+E E++GP++Y 
Sbjct: 1037 EKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYL 1096

Query: 182  CPENFELNNWSTIELPSF 196
            CP+ FEL+NWS I+LPSF
Sbjct: 1097 CPDGFELSNWSVIKLPSF 1114

[Close]

BLAST of Lcy10g005360.1 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.5e-22
Identity = 62/131 (47.33%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 62   VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
            +A+ATTL G+  + K R     FK  N  LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 879  IANATTLHGKFGRPKPRLLETAFKGDNESLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSL 938

Query: 122  EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRLR---DFAVAVVTKE-EEIGPWIYP 181
            EK +RL+RFE+ E +Y  +  P + HSF SAG I         VA VT+E E++ P++YP
Sbjct: 939  EKAKRLSRFENEERDYPRRTVPPLSHSFRSAGTIHQEYDGSSVVAAVTEEREQVRPFVYP 998

Query: 182  CPENFELNNWS 189
            CP+ FEL+NWS
Sbjct: 999  CPDGFELSNWS 1009

[Close]

BLAST of Lcy10g005360.1 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.8e-11
Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 2   TPKEKLFEILLINGYVLIKYAQQDPVHEEYDDNLTCLFHAGAKGHSLEQCHHFHKRVQEL 61
           TP E+LFEILL +GYV ++Y   +  ++ YD++LTC FHAGAKGH+LEQC+ F   VQEL
Sbjct: 397 TPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHALEQCNSFRMIVQEL 456

Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQ 111
           + S       S + K  + V     +   + +  S +   KR  + Y +
Sbjct: 457 LDSKILTVANSHQKKGINVVEDVSVAEGSIAEGSSDALKPKRLTIFYSE 505

HSP 2 Score: 113.2 bits (282), Expect = 1.2e-21
Identity = 58/131 (44.27%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
           +A+ATTL G+  + K R     FK +N  LD +L  +KNT+RFGLGYK ++ D+IRV   
Sbjct: 409 IANATTLHGKFGRPKPRLLEAAFKVNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSM 468

Query: 122 EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRLR----DFAVAVVTKEEEIGPWIYP 181
           EK +RL+RFE+ E +Y  +  P + HS  SAG I         A AV  + E++ P++YP
Sbjct: 469 EKAKRLSRFENGERDYSRRTVPPLSHSLRSAGTIHQEYDESSVAAAVTEEREQVEPFVYP 528

Query: 182 CPENFELNNWS 189
           CP+ F+L+NWS
Sbjct: 529 CPDGFKLSNWS 539

[Close]

BLAST of Lcy10g005360.1 vs. NCBI nr
Match: XP_022147181.1 (uncharacterized protein LOC111016192 [Momordica charantia])

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-26
Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
           +A+ATTL G+  + K R     FK  N+ LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 184 IANATTLHGKFGRPKPRLLETAFKGDNASLDKLLMMAKNTKKFGLGYKPSRGDIIRVWSL 243

Query: 122 EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRL---RDFAVAVVTKE-EEIGPWIYP 181
           EK +RL+RFE+ E +Y  +  P + HSF SAGII         VA VT+E E++GP++YP
Sbjct: 244 EKAKRLSRFENEERDYPRRTVPPLSHSFRSAGIIHQEYDESSVVAGVTEEREQVGPFVYP 303

Query: 182 CPENFELNNWSTIELPSF 196
           CP+ FEL+NWS +ELPSF
Sbjct: 304 CPDGFELSNWSVLELPSF 321

[Close]

BLAST of Lcy10g005360.1 vs. NCBI nr
Match: XP_022155744.1 (uncharacterized protein LOC111022791 [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-25
Identity = 68/138 (49.28%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
           + +ATTL G+  + KSR     FK  N  LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 393 IENATTLHGKFGRPKSRLLETAFKGDNESLDKLLRMAKNTKKFGLGYKLSRGDIIRVRSL 452

Query: 122 EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRL---RDFAVAVVTKE-EEIGPWIYP 181
           EK +RL+RFE+ E +Y  ++ P + HSF SAG I         VA VT+E E++GP++Y 
Sbjct: 453 EKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYL 512

Query: 182 CPENFELNNWSTIELPSF 196
           CP+ FEL+NWS IELPSF
Sbjct: 513 CPDGFELSNWSVIELPSF 530

[Close]

BLAST of Lcy10g005360.1 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-25
Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 62   VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
            +A+ATTL G+  + K R     FK  N  LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 977  IANATTLHGKFGRPKPRLLETAFKGDNGSLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSL 1036

Query: 122  EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRL---RDFAVAVVTKE-EEIGPWIYP 181
            EK +RL+RFE+ E +Y  ++ P + HSF SAG I         VA VT+E E++GP++Y 
Sbjct: 1037 EKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYL 1096

Query: 182  CPENFELNNWSTIELPSF 196
            CP+ FEL+NWS I+LPSF
Sbjct: 1097 CPDGFELSNWSVIKLPSF 1114

[Close]

BLAST of Lcy10g005360.1 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-22
Identity = 62/131 (47.33%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 62   VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
            +A+ATTL G+  + K R     FK  N  LD +L  +KNTK+FGLGYK  + D+IRV   
Sbjct: 879  IANATTLHGKFGRPKPRLLETAFKGDNESLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSL 938

Query: 122  EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRLR---DFAVAVVTKE-EEIGPWIYP 181
            EK +RL+RFE+ E +Y  +  P + HSF SAG I         VA VT+E E++ P++YP
Sbjct: 939  EKAKRLSRFENEERDYPRRTVPPLSHSFRSAGTIHQEYDGSSVVAAVTEEREQVRPFVYP 998

Query: 182  CPENFELNNWS 189
            CP+ FEL+NWS
Sbjct: 999  CPDGFELSNWS 1009

[Close]

BLAST of Lcy10g005360.1 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10
Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 2   TPKEKLFEILLINGYVLIKYAQQDPVHEEYDDNLTCLFHAGAKGHSLEQCHHFHKRVQEL 61
           TP E+LFEILL +GYV ++Y   +  ++ YD++LTC FHAGAKGH+LEQC+ F   VQEL
Sbjct: 397 TPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHALEQCNSFRMIVQEL 456

Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQ 111
           + S       S + K  + V     +   + +  S +   KR  + Y +
Sbjct: 457 LDSKILTVANSHQKKGINVVEDVSVAEGSIAEGSSDALKPKRLTIFYSE 505

HSP 2 Score: 113.2 bits (282), Expect = 2.6e-21
Identity = 58/131 (44.27%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 62  VASATTLCGQSKKSKSRSSVMTFKESNSHLDDVLSQSKNTKRFGLGYKQDKADMIRVHKR 121
           +A+ATTL G+  + K R     FK +N  LD +L  +KNT+RFGLGYK ++ D+IRV   
Sbjct: 409 IANATTLHGKFGRPKPRLLEAAFKVNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSM 468

Query: 122 EKERRLARFESREPEYGEKVNPHVYHSFESAGIIRLR----DFAVAVVTKEEEIGPWIYP 181
           EK +RL+RFE+ E +Y  +  P + HS  SAG I         A AV  + E++ P++YP
Sbjct: 469 EKAKRLSRFENGERDYSRRTVPPLSHSLRSAGTIHQEYDESSVAAAVTEEREQVEPFVYP 528

Query: 182 CPENFELNNWS 189
           CP+ F+L+NWS
Sbjct: 529 CPDGFKLSNWS 539

The following BLAST results are available for this feature:

BLAST of Lcy10g005360.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g005360.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1K4	7.5e-27	50.00	uncharacterized protein LOC111016192 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DR66	4.9e-26	49.28	uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D099	1.1e-25	48.55	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1CNY7	2.5e-22	47.33	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]
A0A6J1CNY7	5.8e-11	39.45	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]

BLAST of Lcy10g005360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147181.1	1.5e-26	50.00	uncharacterized protein LOC111016192 [Momordica charantia]	[more]
XP_022155744.1	1.0e-25	49.28	uncharacterized protein LOC111022791 [Momordica charantia]	[more]
XP_022147189.1	2.2e-25	48.55	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022143495.1	5.2e-22	47.33	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]
XP_022143495.1	1.2e-10	39.45	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]

BLAST of Lcy10g005360.1 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy10g005360	Lcy10g005360	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005360.1.exon2	Lcy10g005360.1.exon2	exon
Lcy10g005360.1.exon1	Lcy10g005360.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005360.1.cds2	Lcy10g005360.1.cds2	CDS
Lcy10g005360.1.cds1	Lcy10g005360.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy10g005360.1	Lcy10g005360.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid
molecular_function	GO:0003676	nucleic acid binding