Lcy10g005080 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g005080
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr10: 13949372 .. 13956484 (-)
RNA-Seq ExpressionLcy10g005080
SyntenyLcy10g005080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAAATTGCAAACGTGTCCGACGCGCGTCTTTATATTGCCATCGCACGTTGCGTTCTGGCGCTCCACATAATATCGAAGCGGAGGAATGCCATGAGAGATCGATAGCTTCGCCATGGAAATTTATCGGAGCTCTTCACTTCCAGGTCTGTCCAAAACTCATTCTCACCTCTTTCTCACCTCCCTAACTTCCTAAATTGTTCTGTTTTCTGTTTGATCCATATGAAACGCATGCTAATTCAATAGAACATCAATGCGTTTAAATTTTTTATTTGGTTATTTTCTTAATTTTGACTTTAATTTTGTTTTCGACGAGTATCTTTCTGGTGCAATGTTGCATCTCTAGATCTAAATCAACTAGTATTTTTAAAGCCTTCGAAGATGTAGGAAGGTACTGTTTTGTGCATTGTCATATGCAAAGTTTTCATAGAACTGTCAACATTTTCATTGAAGAATTCAAGAACGATCTTAGAAAAATTTATCTCAAGTTCAGTCTCTTGAACGTCAAGATTTATCTATTGATTTTTGCTGAGCATTTCAATATGTTCCTTCCTCTCGTCGGTTTGAAGTTGTCTTTTCTTTTAATACACCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGTTGTTACAGAATCAGTTTCAGGCTCACCAAAAGATGTGCAAACTAACAAAGGTAGAGAAAAAACAGTGAGGGCCGAACCATCTCGACAGATTGATATGGCTGGGGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGAGGGTTTGGTGCGAGGGATGATATTGGTAGTTTTCTTCCTGTTGCAAGCGATTCTACAGACTTCGAGGCTACAATTCTGAATGCTCGAGACTATGAAGGACCACAGGTGGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAACTACAAAAACTGAGTAGTTCTGCTTGAGCATTTTGTTTGTGTCCAACTTCAGTCATTTTTTAGTACAGTTTGTTTACTAGGTCTGTACAGGATCATGTTTTGTCTTATGTCACATTAGGAAGATTTATTTGTTTATTGTACCTTTGAATCAAGATAGACTATGACTCTTTCCAATACAATCGTCAAGATAGATGTGATGATGACTCTTTCAAAATTATGCTTGGAATGCCCTTAGGAAGCCAAGGTAAGCTCATGTTTCTATTATGCATTTGACTTTTGATTGCCTTTTAACTCTTAAACCTCTTGAAGAAAGAACTCAAGGCATCCACAGTCTTTGTTCTACTTAATGATATTATTACGATAAAATACATTTTAGATTTATTTTACCTTTATCATATCATTTTGGCATTCTGTCCCTCTAGGTTGTTCTTTTTGTGGCTTGTTTTAGATACAAGATGTTGTAAAGGAGTGGCTTTCTGGAAGATTCTTTGTCCCGGAGCAAGGATTGACAATGGGTCGTAGGCAGATTTCCTCTCCATCAGTAGCTGCCATTTGGAGCCAAAATGAGCTTGCCACTCGTCGTGGGAGCTATAATGAGGCAAATATTGCTTACATCCTGGAAGAGCCCTGACACAGTAGTCCAAAATTATTTGGTTTTGGGCTAAAATGTGTTCTAAGCTCCCTTTCCCAGTTGAAGTTGGCAGTGCAGAAAATAAGAAACCCACCAGGTAGAAAATGTCTTCGTCTGGTGTGACCAATGATGTTTTATTGTTCCACCTGTATAATCCAAACTGATTTGTATTAGGATGGAGAAATAATATAGGTGTTAAGAGTTTCTGGGACAAATCTAATGAAACAACTACTTGGATTTGTTAACTGGGTAGATTAGGATGGGACCGTTGCTTGAATCTGAAATTATGTTGCCAAACACCTCTGCAGCAAAATCATGTATTTTGCTTCTTGGGATCATTAGATTCAGCCAAGGGTGAGGAATCTCCCACAATCCTTTTTCCCTGAGTTTTTTCTCAGATGTGTGCACTCTATCCAGAAACTCCACGTAAGGAACTTCTGATAGAAAGAGAGTGAATGGAATGTAGCTCAATTGTGATAGCAACTTCTCAACTCTCTGCATGATCACGTAGAGCTTAGACATGCCGTTATTTGCTAATCATTTTTTCTTAGGAACTTATTATTTTGGCTGTTTGGTATGACCCTGATATCTTATAAAATATCTGGCGATACTCACCTTGTTCATAGTTTCAGTCTCTTCGGGGTTGAAGTACATGGCCATTTCTAGACAGTACAAAGTTGTTCTATCCGTGACGAATTGGCTGGCTTGAACTGGGTCTTTGGGATCAAAGGAGGATCTCCAATTATTGAGAATACCAGTTCTATTTATTAGAACAAAGCCTTCAATATAATCGAAGGAGTACTTGGAGGATATTAGATGCTCCTGGTCCTTGGAGAATATGGCGAAGTCTGAGTACAAGGTTCTTATCCACTTTACCTGTCAAAAGATGGTGGATTGCGTTATACATTACAAGATATCACAAAAAGGTTTACATTATGTACCTATTCTGATGGAATGCAGGGTATATTACCATTTTTGGTGCTGATTGTAGAGAAATCCTCGCCCTTGTGATGATGCCAAACTGACCAAGACCTCCAAGTACACTGTTAAATAGGTCTGCATTCTGCTGCTCCGAACAGGTAATTACCTCTCCCTTTCCTGCACTCAATTGAAACTACATCGGTTCATCTACCTCCAAGTTCTTAATATTGAAAGGAGTTAAAGCTTCGTTTTCTTTTGCTTTGTTGGGCTTTGTTTTCTATAGTTTTCTCTCTCTAACTTCCTCTGGCTTTCTCCATTTGTTGGTGCTCTTGGCCCTTGGCAACCTCTCGTCATTTTGTATTTCTCAGAGAGGTTTATGCTATTTTCACACTGCTTCCGTTTCTCTTTTTTGCGTATTCACTATTGGGTTTCCATTCCAACGTTATACCGACGTTTTTATTTTTCTTCCCTTTTCACCAAATGAAAGATCATTCTTCTTGTTTCTGTTCTAATTGAAAGAAAAAGGCAAAAGAGAACTTGGGACAGAAAACTAGAAATGAAGATGAAGATAAAAAGTTCTAGCTGAGTTATTAGTACTCTACATTTTCCTTTTGAATGACAGCATTTTAATCTGAATGTGTTCATTTCAGAGGGGTTGAGAGTTATTATCACTGCTTCAAATGTTGTTTCTAATTATAGGTCTTACGTGATTGAGGGGTTGGCCGAAATGAAAGAGTCTAGGGTCAACCGTTTCCTATGTTAAAAGGAAATTACAAAAACCAACACGTTTTAGATGGTTACTTTGTTGTCCTTTCTCGATTCTTGAGAAAGCTCATCCTTCTGGTGGATAAGATTATCCAATTTTGTACAGAATTGCAAGTGTCCATAATACTTGCAAAACTTCTACAATATTTCAAAATAACAATATTCATAAATTCAATATAGACGTAATTCTAAATCTATTTGATATCATTTGATTATCACAATATTCATGAAATAAGATTAATGATTTGAAATTCCATAAAAGAAATGTTTATGGTAAATTGGAGACCTAACATTAGGATCGATGTATACATTTTCTTTCAACATCTAGGAATTCTGTTATTGTTTATAATTACTTGCGTTTTTAAACTTCTCCATATAATTTTATCAGAGACTGGTATCCATGTTTTCATCTTTGATTAATATCATTGTTACCCTCAATTTTCTCATCCGTGAGATTGTTCATCCAAGTGGAGGAAGAAACATAGAGTGTGAGCAATTTATGAAGGTATAGAGGATGTAGAGTTGGGAGGTGAAGTTATTCCTCTCACCAAAAAGGAATTACGGAGGATCCCCACAGCATGCAACACGATTACTATTTCGATTTTCTGCATAATGACTTTGTTATGGAGTTTATGAACTAAGTGTCGGCAGATTTGGGTGGATTACATGCTTTTGGCAAAAAGTGAAAAAACTACCTCTAAATTATTGTGACCCTATCTTTACATGGTAAAAATTTGGTTAGTTTGTTACCTCTCGTTAAAGATTCCCTTTCATGAGAGAGAAAAGTCTCTTTCTAATCTTATTAAAAAAAAATTAGTCCCTTACTAAGGAAAAAAATTTCTGTCTATCACACTCTGCTTTGAAAATTCTCTTCCCTCCCTACCATACAATTGTCTCAAAATTTCTCTTTATTGCACCCGTCTCCATAATTTTTTAGATAGGGAAGTGTGGTAGAGGGATAAAAATAGTCCTTGAAGAGGAATATGTGAGAGAGACATTTTTAGAGAGAGAAAAGTTTTAGAGAGAAAGATTCTTTTGGCTTTGGCTTTGGCTTCTCTTTGTTATCAGATATCGGATAAAATTGATAATGGAGGTTAACAGAATGATCGAAATTTTACACTTGAAAGTTTTGTGGTCCACCCACCCTAATTAAATTAGGGGGTCTGTAAAATTTGCCTGTGGCGATGGTCAAGTATTGCAGGAAGGTTCGTCATCAACATACAATATTGATAATTTGCAAATCAAATTTCCCTCTAAAAGTATCATCTTTAATTGTTATGCTCGTGAAGCTCAGTAAGTTTATACCCAAATTATGTGATAAAAGAAACAGTATAACAGAATCTGAAAAAAAATTGATAAACCATTAATGTAAGAATGTAAGTTAGAAAATTTATTAGTACAATATTTATGTATATGATCACTACTCTACACATGATTCAGTGACAGAAATTCTAATCAATTATATGCATTACAAAAAGCTTATGAATAGAATCCATGGAAAAGTACCTGTGACAACTTGTAGCTGGTGGACGTTATTGATTTGAGGTCCATATCTAAAAGCTTGCCCACTAATACCAGCATTTGATAGAGTACCTCCCACGGAAAGATGAAGGTAGTCAGTCCAAGATTTTGGTGTTAAGCCATATTTAAGTGTTTCATGTAAGACATTTATCCACAGCTCTCCTCCTGGAACATCCACCCACGGCAGGTTTCCACTGTGAACTTGCATGGTTGGTTCCTTTAGGGACTCCATGTTGATAACAAGGCCTTGTAAGGCTTGTGCTTGACCTTGAAGAGAATGGCCGTGGCCCCTTGCAGCAACTGTAAGTCCTGTTCCTGAACCCATTTGAAAAATATGCTTTAATGTAATTGAAATATCTTCGACTGAAAGTGGATGTAGAACTGCAAAGGGTAGCATGTGATATCTATTGCCAAAATCTTTAGCTGCTTCTTGATTGTTTTTAAAGCTAAAGTATCCATCTAGGCTTAGTGTTTCCAAGGATGAAAGGACGTTAGAAGAAGACTGTTTAGGAGGGTGGCCAGTCATTGGCTCCCCGAAACATGGGGTGAAACAAAGGTTGGTTCTATAAGTTGCACAGTTCATGAATAGGATCATGGAGAGTTTGAGGAGTAACATTTTGTTGTAGTTGAGGAAGCTGGAAAATGGTGACCCCATGTTTCTAAATGTTGAGTTTCTCTTTGTTTTCTCTTTATGAGGCAAAGAGAAAAGAAGTGGTTGTAGGAGAGCTTAAGGTAATTGGAGGAAGGAGAAGAGAATTTAAAGGGCTTGTTTGTCTAATGAACAGTTTCTACGTTGGCGCAGAAGTTATTTAACTTACTGTCTTGTCTTTGGGTGGGTAGGCTTCTTTATTAGCCCAACTTTTCTTCGGTCCTAATGTAAAGCCCCTCATATGGTTGAGAGAAACTGCTGACGTCATTTTTAAAAATATTTTCTTAATAAAAATATGGTTAGATAACAACACTGTTGCATATAATTATTTTATTTCAATTGGGCTTTCATGGGTGACTTCTTTTTCTCTTAAAAAAGGGAGTGAGAATTCAAAACTTTAATCTTTTAGTTGAGGTTATATACTTTTACTGGTAGTACTATGTTTAGGTTGTAGATGTAGTTACTCATCATTCTACATGTGTGAACAGTGGATTTTTGTTCCACAATAATATCAAAGTTAATAAACTATGAAATCTCAATTAAAAATAAAATAAAAACACAAACTGTTCTGAAAATCATTGTTGGTTTTTTTAGGTTTCTTTGTTCTCTATGATAGCATTAGAATACTTCAATCATCATATTGCCGTACAATTTATGGAACATATTAACACTCAAGCTCATGCAAATGTAAATAGCAAATTTGGGTATACCAAAGTGGAGACATGTTGAAAACAAATGTGTATTTAAACTTGTATTACAAGGAGAGGAGCTGGGGCCGTTGAAGATCGTCGGGTGAGGCCTATTAAAAGCAAAGTAAGTTGTTATGAACAGTATTGATTCTATTATTTTACATTCTTTGAGAAAAGTCAGGTGACAAAGTGAAATGAATTGAAGCAAGTTTTAAAGGCGCAGTGGTGAGTTGAAATGGACCATCTGGAGTTCCTTGGGGATGTTGATGTATGGGAAATGGTCCTAACTCTTAAAGCTATTTGATCATTGTAGGTAAGGTGTCAAGCGGGTCCCTGGACATGTGATCACCACGTGGAGCCACTGGTACAACAATTCTCCTCACATTCACTCTCAACATTAAATTTTTCAAGAAAAAAAAAAACATGTTTATTTCTGTATTTTACATGCCTTACAATATATTATACCATTAAGAGGTTTGATTCCAGAACATTAACAAGGACAATTTGGCTACGAAATCTTGGCATTCTCTCTATATTATGTGCTGCTTTTTGTTCTAACTAATATACCATGTTGAGTTGGGAACAGATGGGTATGTGAGGGATGTAAATTGATGAAGCACTAACAAAACATGGTACAATTATTGTAGGAGTTGTCTCTTCTAGAGGAGGGTTGTTGCAGAAGCTTTAAAGCAAGGCGTCATGAAGACCTCGTGGTAGAAAGCTACTTGGTCGCCCTACCAAGTTTTGTGGAGTGACGTCCATCTTTTCGCAAGCTGCATCGATGTTGATGTGGTCTTCGACCTTTTGAATGACAATAATATGACAATATCACAATGACCTTTTGAACGATGGTAGTATGATGATATCGTTATGTTTATTGTATTTTCATTGTATAGATGATTTTATGAGATGATGTAACCTACTTAAAATAGGCTTAGGAATAGCGTTTAGAAATAGGATTTGTATTTTTCATCAAAAAGTTATAATTCAAATGCCTGGTGCTTTATATGTG

mRNA sequence

TTCAAATTGCAAACGTGTCCGACGCGCGTCTTTATATTGCCATCGCACGTTGCGTTCTGGCGCTCCACATAATATCGAAGCGGAGGAATGCCATGAGAGATCGATAGCTTCGCCATGGAAATTTATCGGAGCTCTTCACTTCCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGTTGTTACAGAATCAGTTTCAGGCTCACCAAAAGATGTGCAAACTAACAAAGGTAGAGAAAAAACAGTGAGGGCCGAACCATCTCGACAGATTGATATGGCTGGGGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGAGGGTTTGGTGCGAGGGATGATATTGGTAGTTTTCTTCCTGTTGCAAGCGATTCTACAGACTTCGAGGCTACAATTCTGAATGCTCGAGACTATGAAGGACCACAGGTGGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAACTACAAAAACTGAGTAGTTCTGCTTGAGCATTTTGTTTGTGTCCAACTTCAGTCATTTTTTAGTACAGTTTGTTTACTAGGTCTGTACAGGATCATGTTTTGTCTTATGTCACATTAGGAAGATTTATTTGTTTATTGTACCTTTGAATCAAGATAGACTATGACTCTTTCCAATACAATCGTCAAGATAGATGTGATGATGACTCTTTCAAAATTATGCTTGGAATGCCCTTAGGAAGCCAAGATACAAGATGTTGTAAAGGAGTGGCTTTCTGGAAGATTCTTTGTCCCGGAGCAAGGATTGACAATGGGTCGTAGGCAGATTTCCTCTCCATCAGTAGCTGCCATTTGGAGCCAAAATGAGCTTGCCACTCGTCGTGGGAGCTATAATGAGGCAAATATTGCTTACATCCTGGAAGAGCCCTGACACAGTAGTCCAAAATTATTTGGTTTTGGGCTAAAATGTGTTCTAAGCTCCCTTTCCCAGTTGAAGTTGGCAGTGCAGAAAATAAGAAACCCACCAGGTAGAAAATGTCTTCGTCTGGTGTGACCAATGATGTTTTATTGTTCCACCTGTATAATCCAAACTGATTTGTATTAGGATGGAGAAATAATATAGGTGTTAAGAGTTTCTGGGACAAATCTAATGAAACAACTACTTGGATTTGTTAACTGGGTAGATTAGGATGGGACCGTTGCTTGAATCTGAAATTATGTTGCCAAACACCTCTGCAGCAAAATCATGTATTTTGCTTCTTGGGATCATTAGATTCAGCCAAGGGTGAGGAATCTCCCACAATCCTTTTTCCCTGAGTTTTTTCTCAGATGTGTGCACTCTATCCAGAAACTCCACGTAAGGAACTTCTGATAGAAAGAGAGTGAATGGAATGTAGCTCAATTGTGATAGCAACTTCTCAACTCTCTGCATGATCACGTAGAGCTTAGACATGCCGTTATTTGCTAATCATTTTTTCTTAGGAACTTATTATTTTGGCTGTTTGGTATGACCCTGATATCTTATAAAATATCTGGCGATACTCACCTTGTTCATAGTTTCAGTCTCTTCGGGGTTGAAGTACATGGCCATTTCTAGACAGTACAAAGTTGTTCTATCCGTGACGAATTGGCTGGCTTGAACTGGGTCTTTGGGATCAAAGGAGGATCTCCAATTATTGAGAATACCAGTTCTATTTATTAGAACAAAGCCTTCAATATAATCGAAGGAGTACTTGGAGGATATTAGATGCTCCTGGTCCTTGGAGAATATGGCGAAGTCTGAGTACAAGGGTATATTACCATTTTTGGTGCTGATTGTAGAGAAATCCTCGCCCTTGTGATGATGCCAAACTGACCAAGACCTCCAAGTACACTGTTAAATAGGTCTGCATTCTGCTGCTCCGAACAGGTAATTACCTCTCCCTTTCCTGCACTCAATTGAAACTACATCGGTTCATCTACCTCCAAGTTCTTAATATTGAAAGGAGTTAAAGCTTCGTTTTCTTTTGCTTTGTTGGGCTTTGTTTTCTATAGTTTTCTCTCTCTAACTTCCTCTGGCTTTCTCCATTTGTTGGTGCTCTTGGCCCTTGGCAACCTCTCGTCATTTTGTATTTCTCAGAGAGGTTTATGCTATTTTCACACTGCTTCCGTTTCTCTTTTTTGCGTATTCACTATTGGGTTTCCATTCCAACGTTATACCGACGTTTTTATTTTTCTTCCCTTTTCACCAAATGAAAGATCATTCTTCTTGTTTCTGTTCTAATTGAAAGAAAAAGGCAAAAGAGAACTTGGGACAGAAAACTAGAAATGAAGATGAAGATAAAAAGTTCTAGCTGAGTTATTAGTACTCTACATTTTCCTTTTGAATGACAGCATTTTAATCTGAATGTGTTCATTTCAGAGGGGTTGAGAGTTATTATCACTGCTTCAAATGTTGTTTCTAATTATAGGTCTTACGTGATTGAGGGGTTGGCCGAAATGAAAGAGTCTAGGGTCAACCGTTTCCTATGTTAAAAGGAAATTACAAAAACCAACACGTTTTAGATGGTTACTTTGTTGTCCTTTCTCGATTCTTGAGAAAGCTCATCCTTCTGGTGGATAAGATTATCCAATTTTGTACAGAATTGCAAGTGTCCATAATACTTGCAAAACTTCTACAATATTTCAAAATAACAATATTCATAAATTCAATATAGACGTAATTCTAAATCTATTTGATATCATTTGATTATCACAATATTCATGAAATAAGATTAATGATTTGAAATTCCATAAAAGAAATGTTTATGGTAAATTGGAGACCTAACATTAGGATCGATGTATACATTTTCTTTCAACATCTAGGAATTCTGTTATTGTTTATAATTACTTGCGTTTTTAAACTTCTCCATATAATTTTATCAGAGACTGGTATCCATGTTTTCATCTTTGATTAATATCATTGTTACCCTCAATTTTCTCATCCGTGAGATTGTTCATCCAAGTGGAGGAAGAAACATAGAGTGTGAGCAATTTATGAAGGTATAGAGGATGTAGAGTTGGGAGGTGAAGTTATTCCTCTCACCAAAAAGGAATTACGGAGGATCCCCACAGCATGCAACACGATTACTATTTCGATTTTCTGCATAATGACTTTGTTATGGAGTTTATGAACTAAGTGTCGGCAGATTTGGGTGGATTACATGCTTTTGGCAAAAAGTGAAAAAACTACCTCTAAATTATTGTGACCCTATCTTTACATGGTAAAAATTTGGTTAGTTTGTTACCTCTCGTTAAAGATTCCCTTTCATGAGAGAGAAAAGTCTCTTTCTAATCTTATTAAAAAAAAATTAGTCCCTTACTAAGGAAAAAAATTTCTGTCTATCACACTCTGCTTTGAAAATTCTCTTCCCTCCCTACCATACAATTGTCTCAAAATTTCTCTTTATTGCACCCGTCTCCATAATTTTTTAGATAGGGAAGTGTGGTAGAGGGATAAAAATAGTCCTTGAAGAGGAATATGTGAGAGAGACATTTTTAGAGAGAGAAAAGTTTTAGAGAGAAAGATTCTTTTGGCTTTGGCTTTGGCTTCTCTTTGTTATCAGATATCGGATAAAATTGATAATGGAGGTTAACAGAATGATCGAAATTTTACACTTGAAAGTTTTGTGGTCCACCCACCCTAATTAAATTAGGGGGTCTGTAAAATTTGCCTGTGGCGATGGTCAAGTATTGCAGGAAGGTTCGTCATCAACATACAATATTGATAATTTGCAAATCAAATTTCCCTCTAAAAGTATCATCTTTAATTGTTATGCTCGTGAAGCTCAGTAAGTTTATACCCAAATTATGTGATAAAAGAAACAGTATAACAGAATCTGAAAAAAAATTGATAAACCATTAATGTAAGAATGTAAGTTAGAAAATTTATTAGTACAATATTTATGTATATGATCACTACTCTACACATGATTCAGTGACAGAAATTCTAATCAATTATATGCATTACAAAAAGCTTATGAATAGAATCCATGGAAAAGTACCTGTGACAACTTGTAGCTGGTGGACGTTATTGATTTGAGGTCCATATCTAAAAGCTTGCCCACTAATACCAGCATTTGATAGAGTACCTCCCACGGAAAGATGAAGGTAGTCAGTCCAAGATTTTGGTGTTAAGCCATATTTAAGTGTTTCATGTAAGACATTTATCCACAGCTCTCCTCCTGGAACATCCACCCACGGCAGGTTTCCACTGTGAACTTGCATGGTTGGTTCCTTTAGGGACTCCATGTTGATAACAAGGCCTTGTAAGGCTTGTGCTTGACCTTGAAGAGAATGGCCGTGGCCCCTTGCAGCAACTGTAAGTCCTGTTCCTGAACCCATTTGAAAAATATGCTTTAATGTAATTGAAATATCTTCGACTGAAAGTGGATGTAGAACTGCAAAGGGTAGCATGTGATATCTATTGCCAAAATCTTTAGCTGCTTCTTGATTGTTTTTAAAGCTAAAGTATCCATCTAGGCTTAGTGTTTCCAAGGATGAAAGGACGTTAGAAGAAGACTGTTTAGGAGGGTGGCCAGTCATTGGCTCCCCGAAACATGGGGTGAAACAAAGGTTGGTTCTATAAGTTGCACAGTTCATGAATAGGATCATGGAGAGTTTGAGGAGTAACATTTTGTTGTAGTTGAGGAAGCTGGAAAATGGTGACCCCATGTTTCTAAATGTTGAGTTTCTCTTTGTTTTCTCTTTATGAGGCAAAGAGAAAAGAAGTGGTTGTAGGAGAGCTTAAGGTAATTGGAGGAAGGAGAAGAGAATTTAAAGGGCTTGTTTGTCTAATGAACAGTTTCTACGTTGGCGCAGAAGTTATTTAACTTACTGTCTTGTCTTTGGGTGGGTAGGCTTCTTTATTAGCCCAACTTTTCTTCGGTCCTAATGTAAAGCCCCTCATATGGTTGAGAGAAACTGCTGACGTCATTTTTAAAAATATTTTCTTAATAAAAATATGGTTAGATAACAACACTGTTGCATATAATTATTTTATTTCAATTGGGCTTTCATGGGTGACTTCTTTTTCTCTTAAAAAAGGGAGTGAGAATTCAAAACTTTAATCTTTTAGTTGAGGTTATATACTTTTACTGGTAGTACTATGTTTAGGTTGTAGATGTAGTTACTCATCATTCTACATGTGTGAACAGTGGATTTTTGTTCCACAATAATATCAAAGTTAATAAACTATGAAATCTCAATTAAAAATAAAATAAAAACACAAACTGTTCTGAAAATCATTGTTGGTTTTTTTAGGTTTCTTTGTTCTCTATGATAGCATTAGAATACTTCAATCATCATATTGCCGTACAATTTATGGAACATATTAACACTCAAGCTCATGCAAATGTAAATAGCAAATTTGGGTATACCAAAGTGGAGACATGTTGAAAACAAATGTGTATTTAAACTTGTATTACAAGGAGAGGAGCTGGGGCCGTTGAAGATCGTCGGGTGAGGCCTATTAAAAGCAAAGTAAGTTGTTATGAACAGTATTGATTCTATTATTTTACATTCTTTGAGAAAAGTCAGGTGACAAAGTGAAATGAATTGAAGCAAGTTTTAAAGGCGCAGTGGTGAGTTGAAATGGACCATCTGGAGTTCCTTGGGGATGTTGATGTATGGGAAATGGTCCTAACTCTTAAAGCTATTTGATCATTGTAGGTAAGGTGTCAAGCGGGTCCCTGGACATGTGATCACCACGTGGAGCCACTGGAGTTGTCTCTTCTAGAGGAGGGTTGTTGCAGAAGCTTTAAAGCAAGGCGTCATGAAGACCTCGTGGTAGAAAGCTACTTGGTCGCCCTACCAAGTTTTGTGGAGTGACGTCCATCTTTTCGCAAGCTGCATCGATGTTGATGTGGTCTTCGACCTTTTGAATGACAATAATATGACAATATCACAATGACCTTTTGAACGATGGTAGTATGATGATATCGTTATGTTTATTGTATTTTCATTGTATAGATGATTTTATGAGATGATGTAACCTACTTAAAATAGGCTTAGGAATAGCGTTTAGAAATAGGATTTGTATTTTTCATCAAAAAGTTATAATTCAAATGCCTGGTGCTTTATATGTG

Coding sequence (CDS)

ATGGAAATTTATCGGAGCTCTTCACTTCCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGTTGTTACAGAATCAGTTTCAGGCTCACCAAAAGATGTGCAAACTAACAAAGGTAGAGAAAAAACAGTGAGGGCCGAACCATCTCGACAGATTGATATGGCTGGGGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGAGGGTTTGGTGCGAGGGATGATATTGGTAGTTTTCTTCCTGTTGCAAGCGATTCTACAGACTTCGAGGCTACAATTCTGAATGCTCGAGACTATGAAGGACCACAGGTGGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAACTACAAAAACTGAGTAG

Protein sequence

MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEISMEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWKETTKTE
Homology
[Close]
BLAST of Lcy10g005080 vs. ExPASy TrEMBL
Match: A0A1S3B7A8 (uncharacterized protein LOC103486945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 0 

Query: 1   MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEIS 60
           ME++ +SSLPD+ +D SV+VEK VTESVS  PKD+QTN+GRE  V+AEP+RQIDMAGEI+
Sbjct: 41  MELHPTSSLPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEIN 100

Query: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWK 120
           MEASMSADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGPQ EISRPGLGWK
Sbjct: 101 MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 160

Query: 121 ETTKTE 127
           E TKTE
Sbjct: 161 EATKTE 166

[Close]
BLAST of Lcy10g005080 vs. ExPASy TrEMBL
Match: A0A5A7UDF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007360 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.0e-47
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 0 

Query: 9   LPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEISMEASMSAD 68
           +PD+ +D SV+VEK VTESVS  PKD+QTN+GRE  V+AEP+RQIDMAGEI+MEASMSAD
Sbjct: 75  IPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSAD 134

Query: 69  DVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWKETTKTE 127
           DVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGPQ EISRPGLGWKE TKTE
Sbjct: 135 DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 192

[Close]
BLAST of Lcy10g005080 vs. ExPASy TrEMBL
Match: A0A6J1J8S5 (uncharacterized protein LOC111482364 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482364 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.9e-46
Identity = 100/126 (79.37%), Postives = 110/126 (87.30%), Query Frame = 0 

Query: 1   MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEIS 60
           ME++ +SSL D+ EDPSVIVEK VTESVS SP+DVQTN+ RE  ++ EPS+QI M GE S
Sbjct: 1   MEVHPTSSLQDEREDPSVIVEKEVTESVSSSPQDVQTNRSRENVMKTEPSQQIGMDGETS 60

Query: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWK 120
           MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATI +AR YEGPQ EISRPGLGWK
Sbjct: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATIRSARAYEGPQGEISRPGLGWK 120

Query: 121 ETTKTE 127
           E TKTE
Sbjct: 121 EATKTE 126

[Close]
BLAST of Lcy10g005080 vs. ExPASy TrEMBL
Match: A0A1S4DUS7 (uncharacterized protein LOC103486945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.7e-46
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 0 

Query: 11  DKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEISMEASMSADDV 70
           D+ +D SV+VEK VTESVS  PKD+QTN+GRE  V+AEP+RQIDMAGEI+MEASMSADDV
Sbjct: 7   DERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSADDV 66

Query: 71  LRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWKETTKTE 127
           LRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGPQ EISRPGLGWKE TKTE
Sbjct: 67  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 122

[Close]
BLAST of Lcy10g005080 vs. ExPASy TrEMBL
Match: A0A6J1F7V5 (uncharacterized protein LOC111441654 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441654 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45
Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0 

Query: 1   MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEIS 60
           ME++ +SSL D+ EDPSV+VEK VTESVS SP+DVQTN+ RE  ++ EPS+QI + GE S
Sbjct: 1   MEVHPTSSLQDEREDPSVMVEKEVTESVSSSPQDVQTNRSRENVMKTEPSQQIGIDGEAS 60

Query: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWK 120
           MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATI +AR YEGPQ EISRPGLGWK
Sbjct: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATIRSARAYEGPQGEISRPGLGWK 120

Query: 121 ETTKTE 127
           E TKTE
Sbjct: 121 EATKTE 126

[Close]
BLAST of Lcy10g005080 vs. NCBI nr
Match: XP_038905784.1 (uncharacterized protein LOC120091740 [Benincasa hispida] >XP_038905785.1 uncharacterized protein LOC120091740 [Benincasa hispida])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 109/126 (86.51%), Postives = 116/126 (92.06%), Query Frame = 0 

Query: 1   MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEIS 60
           ME++RSSSLPDK EDPSV VEK VTESVS SPKDVQTN+GR   ++ EPS+Q+DMAGEIS
Sbjct: 1   MEVHRSSSLPDKREDPSVGVEKDVTESVSSSPKDVQTNRGRGNIMKGEPSQQVDMAGEIS 60

Query: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWK 120
           MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQ EISRPGLGWK
Sbjct: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120

Query: 121 ETTKTE 127
           E TKTE
Sbjct: 121 EATKTE 126

[Close]
BLAST of Lcy10g005080 vs. NCBI nr
Match: XP_008443333.1 (PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo])

HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 0 

Query: 1   MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEIS 60
           ME++ +SSLPD+ +D SV+VEK VTESVS  PKD+QTN+GRE  V+AEP+RQIDMAGEI+
Sbjct: 41  MELHPTSSLPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEIN 100

Query: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWK 120
           MEASMSADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGPQ EISRPGLGWK
Sbjct: 101 MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 160

Query: 121 ETTKTE 127
           E TKTE
Sbjct: 161 EATKTE 166

[Close]
BLAST of Lcy10g005080 vs. NCBI nr
Match: XP_004136669.1 (uncharacterized protein LOC101207074 isoform X1 [Cucumis sativus] >KAE8651196.1 hypothetical protein Csa_002642 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 2.0e-48
Identity = 102/126 (80.95%), Postives = 115/126 (91.27%), Query Frame = 0 

Query: 1   MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEIS 60
           ME++R+SSLPDK +D SV+VEK V ESVS  PKDVQTN+G E  V+AEP++++DMAGEI+
Sbjct: 1   MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEIN 60

Query: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWK 120
           MEASMSADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGPQ EISRPGLGWK
Sbjct: 61  MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120

Query: 121 ETTKTE 127
           E TKTE
Sbjct: 121 EATKTE 126

[Close]
BLAST of Lcy10g005080 vs. NCBI nr
Match: KAA0053822.1 (uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa] >TYK25579.1 uncharacterized protein E5676_scaffold352G007360 [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 0 

Query: 9   LPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEISMEASMSAD 68
           +PD+ +D SV+VEK VTESVS  PKD+QTN+GRE  V+AEP+RQIDMAGEI+MEASMSAD
Sbjct: 75  IPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSAD 134

Query: 69  DVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWKETTKTE 127
           DVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGPQ EISRPGLGWKE TKTE
Sbjct: 135 DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 192

[Close]
BLAST of Lcy10g005080 vs. NCBI nr
Match: XP_022983884.1 (uncharacterized protein LOC111482364 isoform X2 [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 100/126 (79.37%), Postives = 110/126 (87.30%), Query Frame = 0 

Query: 1   MEIYRSSSLPDKTEDPSVIVEKVVTESVSGSPKDVQTNKGREKTVRAEPSRQIDMAGEIS 60
           ME++ +SSL D+ EDPSVIVEK VTESVS SP+DVQTN+ RE  ++ EPS+QI M GE S
Sbjct: 1   MEVHPTSSLQDEREDPSVIVEKEVTESVSSSPQDVQTNRSRENVMKTEPSQQIGMDGETS 60

Query: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPGLGWK 120
           MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATI +AR YEGPQ EISRPGLGWK
Sbjct: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATIRSARAYEGPQGEISRPGLGWK 120

Query: 121 ETTKTE 127
           E TKTE
Sbjct: 121 EATKTE 126

[Close]
BLAST of Lcy10g005080 vs. TAIR 10
Match: AT5G04000.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 7.7e-22
Identity = 47/63 (74.60%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 57  GEISMEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPG 116
           GE++MEAS+SA+DV+RAGGFGA+DDIGSFLPVASDSTDFE +I +ARDYE  Q E+ RPG
Sbjct: 51  GEVNMEASISAEDVIRAGGFGAKDDIGSFLPVASDSTDFEESIRSARDYEEAQPEVQRPG 110

Query: 117 LGW 120
           LG+
Sbjct: 111 LGY 113

[Close]
BLAST of Lcy10g005080 vs. TAIR 10
Match: AT5G04000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl. )

HSP 1 Score: 100.9 bits (250), Expect = 7.7e-22
Identity = 47/63 (74.60%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 57  GEISMEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQVEISRPG 116
           GE++MEAS+SA+DV+RAGGFGA+DDIGSFLPVASDSTDFE +I +ARDYE  Q E+ RPG
Sbjct: 53  GEVNMEASISAEDVIRAGGFGAKDDIGSFLPVASDSTDFEESIRSARDYEEAQPEVQRPG 112

Query: 117 LGW 120
           LG+
Sbjct: 113 LGY 115

The following BLAST results are available for this feature:
BLAST of Lcy10g005080 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy10g005080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B7A81.5e-4982.54uncharacterized protein LOC103486945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7UDF77.0e-4783.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1J8S55.9e-4679.37uncharacterized protein LOC111482364 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S4DUS77.7e-4684.48uncharacterized protein LOC103486945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1F7V53.8e-4577.78uncharacterized protein LOC111441654 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Lcy10g005080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038905784.11.5e-5186.51uncharacterized protein LOC120091740 [Benincasa hispida] >XP_038905785.1 unchara... [more]
XP_008443333.13.1e-4982.54PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo][more]
XP_004136669.12.0e-4880.95uncharacterized protein LOC101207074 isoform X1 [Cucumis sativus] >KAE8651196.1 ... [more]
KAA0053822.11.4e-4683.90uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa] >TYK... [more]
XP_022983884.11.2e-4579.37uncharacterized protein LOC111482364 isoform X2 [Cucurbita maxima][more]
BLAST of Lcy10g005080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G04000.17.7e-2274.60unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
AT5G04000.27.7e-2274.60unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..49
NoneNo IPR availablePANTHERPTHR37250OS05G0496000 PROTEINcoord: 24..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g005080.1Lcy10g005080.1mRNA