Lcy10g002380 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g002380
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	40S ribosomal protein S15a
Location	Chr10: 3287867 .. 3289630 (-)
RNA-Seq Expression	Lcy10g002380
Synteny	Lcy10g002380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATAAACTTCTTTACCCTCAAACCCTAACACTCTTTCTTACTTCTCAGAGTTGAAGCTGACGGACGCCTCCTTCTGCGATTCAGGTACTCCTCTCACATCTCTCCTTCTCCTTTCAGATCGAACTCCGCTGTACACCTATTTGTTTGTGCGTTTCTTTTACCGTTGATTGAGCTATTGAATGCTTATTGTAATCACTTGTTCGTCGATGGGGACTCCGTTTCATTGTAAATGCATCCAAGTTTAGATGTTGGTAGCGGACGTGAGTTCTTACTCGAATTCTAACGTGGTTTTGAACAAAGGAGTTTTTGAACAATTGGGGTTTTTTACTTTTGGTGTACTTCTTCTTGTACACATGTTTTGGATGCGATGATCAGGGCTAGGTTCTAACTTTCTTGTAGTATATTGTTCAATTTCTTTTCCATGATTGCTCACTTTGTGTGGTTTTCCATGAAGCTTTAATTTTGAAGGATGGTTAGAGTTAGTGTCTTGAACGATGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGGAAGCGACAGGTCATGATCAGGCCTTCCTCCAAAGTGGTCATCAAGTTTCTTCTGGTTATGCAGAAGCACGGTTTGTTTGCTCTTTTCAACTTCGCTTTGATTTGGCTTCATGGTAGCAATATCTCTCTGTCTTCTAATTTCATCTTTTGGCTTTTATAGGATATATTGGGGAATTTGAGTATGTCGATGATCATAGATCTGGGAAAATTGTTGTTGAACTCAACGGCAGGCTGAACAAGTGTGGAGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAGGAGATTGAAGGCTGGACTGCTAGGCTGCTCCCTTCCAGACAGGTCTGTTCAACTTGTTCAATGTGATACTGAAGTTTGACTTTCGAATTTTACTTACAAATTACAATGGAATCTTAGTAATTTGGTTGGAGATGTTAGTCATCATAAAATCATCTTGTCTCTTATAGATTATAAATCAGGCTACTTATGTATCTGAATAGATCCCAATAAACAATAGTATGAGTAGATAAATGGGCTACAAAGTTCATGATGGAGTGCTCTAAACTAGCTGCTTAGATTTTGCAAATGTTTAGGCACTAGTTTTGGACTATATTGCGTTCTAATTATCTTTTATTTGCCTTTGTGGGTTGGTGTACTGTATAGAGACTTGTTAAGTAACATGGTCTGAAAATACATGGTAATGATCTGTTTGATAAAATTCATATCTGCAGTTTGGGTTTATTGTGCTGACAACATCTGCGGGAATTATGGATCATGAAGAGGCTAGAAGGAAGAATGTTGGAGGCAAAGTCCTTGGTTTTTTCTATTGAACATGGTTTTGAGCATCCATTTTGGAGTTTTGACATAGCTTTCAAATAGTACTACATTTTCTTGGTAAAGAAAGATCTTATCCTGTAATGATTAGATTTTGTGTTGCCAGTTTCTCATCTTTTAAGTTAATTCCAAGAAAATTTTATTTGTTTTGGTGAAGACATTTTGGGTTTTTAATTATATTGGAAGAGAACTAGTGCTTTTTAATTCCTTGAAGTTTCTTGCTTTCGGTACCCACTACCCAACACTTTGGTTCTCCATCACTCAAGTGCTGAAGTTTTTAAGTTATGGTCTCGTTAAAGAATATTGAAATCATAAGGAAGATGATCCTTGTGATCTGTAAAGTATTGCTCGATGAGATATTGTTACTCATTTTGCATCTTGACTAGTAATCTGTAGTATTCTTTTAGTAGTCTTAAAT

mRNA sequence

TTTATAAACTTCTTTACCCTCAAACCCTAACACTCTTTCTTACTTCTCAGAGTTGAAGCTGACGGACGCCTCCTTCTGCGATTCAGCTTTAATTTTGAAGGATGGTTAGAGTTAGTGTCTTGAACGATGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGGAAGCGACAGGTCATGATCAGGCCTTCCTCCAAAGTGGTCATCAAGTTTCTTCTGGTTATGCAGAAGCACGGATATATTGGGGAATTTGAGTATGTCGATGATCATAGATCTGGGAAAATTGTTGTTGAACTCAACGGCAGGCTGAACAAGTGTGGAGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAGGAGATTGAAGGCTGGACTGCTAGGCTGCTCCCTTCCAGACAGTTTGGGTTTATTGTGCTGACAACATCTGCGGGAATTATGGATCATGAAGAGGCTAGAAGGAAGAATGTTGGAGGCAAAGTCCTTGGTTTTTTCTATTGAACATGGTTTTGAGCATCCATTTTGGAGTTTTGACATAGCTTTCAAATAGTACTACATTTTCTTGGTAAAGAAAGATCTTATCCTGTAATGATTAGATTTTGTGTTGCCAGTTTCTCATCTTTTAAGTTAATTCCAAGAAAATTTTATTTGTTTTGGTGAAGACATTTTGGGTTTTTAATTATATTGGAAGAGAACTAGTGCTTTTTAATTCCTTGAAGTTTCTTGCTTTCGGTACCCACTACCCAACACTTTGGTTCTCCATCACTCAAGTGCTGAAGTTTTTAAGTTATGGTCTCGTTAAAGAATATTGAAATCATAAGGAAGATGATCCTTGTGATCTGTAAAGTATTGCTCGATGAGATATTGTTACTCATTTTGCATCTTGACTAGTAATCTGTAGTATTCTTTTAGTAGTCTTAAAT

Coding sequence (CDS)

ATGGTTAGAGTTAGTGTCTTGAACGATGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGGAAGCGACAGGTCATGATCAGGCCTTCCTCCAAAGTGGTCATCAAGTTTCTTCTGGTTATGCAGAAGCACGGATATATTGGGGAATTTGAGTATGTCGATGATCATAGATCTGGGAAAATTGTTGTTGAACTCAACGGCAGGCTGAACAAGTGTGGAGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAGGAGATTGAAGGCTGGACTGCTAGGCTGCTCCCTTCCAGACAGTTTGGGTTTATTGTGCTGACAACATCTGCGGGAATTATGGATCATGAAGAGGCTAGAAGGAAGAATGTTGGAGGCAAAGTCCTTGGTTTTTTCTATTGA

Protein sequence

MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY

Homology

[Close]

BLAST of Lcy10g002380 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 263.1 bits (671), Expect = 1.7e-69
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy Swiss-Prot
Match: Q9LX88 (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 262.7 bits (670), Expect = 2.2e-69
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 261.5 bits (667), Expect = 4.9e-69
Identity = 125/130 (96.15%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 259.2 bits (661), Expect = 2.4e-68
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKVVIKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-64
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKV+IKFL VMQKHGYI EFEYVDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy TrEMBL
Match: A0A6J1BY30 (40S ribosomal protein S15a-1 OS=Momordica charantia OX=3673 GN=LOC111006763 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy TrEMBL
Match: A0A6J1FJB0 (40S ribosomal protein S15a-1 OS=Cucurbita moschata OX=3662 GN=LOC111444777 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy TrEMBL
Match: A0A6J1JX40 (40S ribosomal protein S15a-1 OS=Cucurbita maxima OX=3661 GN=LOC111489629 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy TrEMBL
Match: A0A6J1I5M1 (40S ribosomal protein S15a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111469448 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.8e-67
Identity = 127/130 (97.69%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. ExPASy TrEMBL
Match: A0A1U8NNK5 (40S ribosomal protein S15a-1 OS=Gossypium hirsutum OX=3635 GN=LOC107950276 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.8e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. NCBI nr
Match: XP_022134546.1 (40S ribosomal protein S15a-1 [Momordica charantia] >XP_022143687.1 40S ribosomal protein S15a-1 [Momordica charantia] >XP_022938588.1 40S ribosomal protein S15a-1 [Cucurbita moschata] >XP_022938589.1 40S ribosomal protein S15a-1 [Cucurbita moschata] >XP_022993711.1 40S ribosomal protein S15a-1 [Cucurbita maxima] >XP_023549602.1 40S ribosomal protein S15a-1 [Cucurbita pepo subsp. pepo] >KAG7016248.1 40S ribosomal protein S15a-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. NCBI nr
Match: MBA0576079.1 (hypothetical protein [Gossypium lobatum] >MBA0629454.1 hypothetical protein [Gossypium davidsonii] >MBA0665132.1 hypothetical protein [Gossypium klotzschianum] >MBA0696872.1 hypothetical protein [Gossypium aridum] >MBA0749886.1 hypothetical protein [Gossypium gossypioides] >MBA0780614.1 hypothetical protein [Gossypium trilobum])

HSP 1 Score: 264.2 bits (674), Expect = 5.8e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 12  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 71

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 72  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 131

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 132 VGGKVLGFFY 141

[Close]

BLAST of Lcy10g002380 vs. NCBI nr
Match: KJB83794.1 (hypothetical protein B456_013G265000 [Gossypium raimondii])

HSP 1 Score: 264.2 bits (674), Expect = 5.8e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 111 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 170

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 171 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 230

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 231 VGGKVLGFFY 240

[Close]

BLAST of Lcy10g002380 vs. NCBI nr
Match: KAF5959454.1 (hypothetical protein HYC85_000663 [Camellia sinensis])

HSP 1 Score: 264.2 bits (674), Expect = 5.8e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVM+RPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 12  MVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 71

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 72  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 131

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 132 VGGKVLGFFY 141

[Close]

BLAST of Lcy10g002380 vs. NCBI nr
Match: MBA0574627.1 (hypothetical protein [Gossypium lobatum])

HSP 1 Score: 264.2 bits (674), Expect = 5.8e-67
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFLLVMQKHGYIGEFEYVDDHRSGK
Sbjct: 103 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 162

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 163 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 222

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 223 VGGKVLGFFY 232

[Close]

BLAST of Lcy10g002380 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 263.1 bits (671), Expect = 1.2e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 263.1 bits (671), Expect = 1.2e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. TAIR 10
Match: AT5G59850.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 263.1 bits (671), Expect = 1.2e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. TAIR 10
Match: AT3G46040.1 (ribosomal protein S15A D )

HSP 1 Score: 262.7 bits (670), Expect = 1.6e-70
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Lcy10g002380 vs. TAIR 10
Match: AT2G39590.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 245.4 bits (625), Expect = 2.6e-65
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKV+IKFL VMQKHGYI EFEYVDDHRSGK
Sbjct: 7   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 66

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 67  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 126

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 127 VGGKVLGFFY 136

The following BLAST results are available for this feature:

BLAST of Lcy10g002380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42798	1.7e-69	96.92	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=...	[more]
Q9LX88	2.2e-69	96.92	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=...	[more]
Q00332	4.9e-69	96.15	40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3	[more]
Q9AT34	2.4e-68	96.92	40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3	[more]
O80646	3.7e-64	90.00	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=...	[more]

BLAST of Lcy10g002380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BY30	1.3e-67	99.23	40S ribosomal protein S15a-1 OS=Momordica charantia OX=3673 GN=LOC111006763 PE=3...	[more]
A0A6J1FJB0	1.3e-67	99.23	40S ribosomal protein S15a-1 OS=Cucurbita moschata OX=3662 GN=LOC111444777 PE=3 ...	[more]
A0A6J1JX40	1.3e-67	99.23	40S ribosomal protein S15a-1 OS=Cucurbita maxima OX=3661 GN=LOC111489629 PE=3 SV...	[more]
A0A6J1I5M1	2.8e-67	97.69	40S ribosomal protein S15a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111469448 PE...	[more]
A0A1U8NNK5	2.8e-67	98.46	40S ribosomal protein S15a-1 OS=Gossypium hirsutum OX=3635 GN=LOC107950276 PE=3 ...	[more]

BLAST of Lcy10g002380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134546.1	2.6e-67	99.23	40S ribosomal protein S15a-1 [Momordica charantia] >XP_022143687.1 40S ribosomal...	[more]
MBA0576079.1	5.8e-67	98.46	hypothetical protein [Gossypium lobatum] >MBA0629454.1 hypothetical protein [Gos...	[more]
KJB83794.1	5.8e-67	98.46	hypothetical protein B456_013G265000 [Gossypium raimondii]	[more]
KAF5959454.1	5.8e-67	98.46	hypothetical protein HYC85_000663 [Camellia sinensis]	[more]
MBA0574627.1	5.8e-67	98.46	hypothetical protein [Gossypium lobatum]	[more]

BLAST of Lcy10g002380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07770.1	1.2e-70	96.92	ribosomal protein S15A	[more]
AT1G07770.2	1.2e-70	96.92	ribosomal protein S15A	[more]
AT5G59850.1	1.2e-70	96.92	Ribosomal protein S8 family protein	[more]
AT3G46040.1	1.6e-70	96.92	ribosomal protein S15A D	[more]
AT2G39590.1	2.6e-65	90.00	Ribosomal protein S8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1490.10		coord: 70..130 e-value: 1.2E-36 score: 126.1
None	No IPR available	GENE3D	3.30.1370.30		coord: 1..69 e-value: 1.5E-35 score: 122.9
None	No IPR available	PANTHER	PTHR11758:SF36	BNAA02G06730D PROTEIN	coord: 1..130
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 7..130 e-value: 9.8E-22 score: 77.2
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 1..130
IPR000630	Ribosomal protein S8	PROSITE	PS00053	RIBOSOMAL_S8	coord: 100..117
IPR000630	Ribosomal protein S8	HAMAP	MF_01302_A	Ribosomal_S8_A	coord: 2..130 score: 32.235695
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 4..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g002380.1	Lcy10g002380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome