Tan0017376 (gene) Snake gourd v1

Overview


Name	Tan0017376
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	TATA-binding protein-associated factor 2N-like
Location	LG06: 2943278 .. 2945257 (+)
RNA-Seq Expression	Tan0017376
Synteny	Tan0017376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGGCCGGGGGATTGGAACTGCAGATCATGCCAGCACCTGAACTTCCAACGGCGGGAGTGCTGTCAACGGTGTGGAGAATCCAAATTCGGGGCTGAATTTGGGGTGTTCGGCGGCCGAGGAAGGAGCATTCCGTCGTCGTACGGAGGAATTGCCTCGCCGGGCTCCGACGTCCGTCCCGGCGACTGGTACTGCGGTGTCGGCAACTGTGGGACCCACAACTTTGCGAACCGGTCGAGCTGCTTCGCATGCGGTGCGTTTAAGGATGAGTCAGCGGCGGCGGCGGCTGCCGGCGGAGGGCTTGATTTTGATATGTCGTCTCGTGGATCGAGGAGCTTTGGATTTGGATTTGGAAGCAATGGCTCACGTGGTGGGGCTTCTTGGAAGTCTGGTGATTGGATTTGTTCCAGGTGATTTCTTTTTACCAATTTATATCTGTTATGTTTTAACATTTTTCTCTATTTATTTTCTAAATTTTTAAAAATATTAGTTATTAAACTTTTAAATTTTGATCTAATATCTTTCTAAACACCTTTAAAATATCTAATAGGTTTTCAATTTTTTAATTTTGTATCTAATAAGTTCTTGAACAATCTTTTTATTTAGGTGTAAAATGTAATTTGTGATAAATTTGTACGGACACTAAGACAGTAAAATTTTGAATTTCTTTTCAAAATTCTATGAAGTTAATAGAAAATTTGAATTTCTCTTTCAAAATTATAGGAAGTTATAGAAATTTTGAACTTTTTTCCCTCTTGTAACTAGCTTAATTTATTTTTAAAATTTTGCTAACTAAATTTATGTTATATAATTATATAAATCTATCGTCATTTTTATTATATACTAGAGAAAATAGTATTATTGAAAAATGTTGAAATATTAGAGAATAGATTGAAACTTTCTTTAACTAGGTTAAGGTTTCACCTTAAATCAGAAATTCGAATTCTCCAATTGTATTCTTTTTTAACTAAAAAAAATGATGAAACTTTTTTAACAACCAGAGTTAAATGAAATTTAAAAAAGGTATTTAAATAGTAGAGACTGAAAAGATATCCTAGTAGCTCTAAAATCAAAGGATAAGAAACAAATGTAAGTGAATATTCTAGCCATAAAACATAGATTTAACCATTTATAAACAATGGTACAAAATGGTTGATTTAATTTGATTTTTGATTACATGATTATAACATATTATCAAACATTCAAGAAGACATGTATCTGATAGATTTTCTTTTTAATTGAAATTGATTGTCGTCGGACTTGCTCAATTTGATAAGTGGCTAAAGTTGAACTAGTATACATTAGTTTATATAGTTCAATTAATTTATAGTTTTTGAGCTTGACTCAAGAATAATTGATCTCACCATCAAATATTGTTCATCTATTTTTTTTTAATTAAGTTGTTTTTAATTTATAGTATTTTAGATTAAGTTTATTTACTTCTGATTAATAAGCAATTTCTACTCCCTATATATAGTATTTTTTTTTATTAATTTCTATACCATACCTTATATTTAATAAATAAAAAAACGGCACCTGCCTCTTCTTTTTCTTTTAGTTTAATAAAGATAAAGATAAATGGTTGAATCTTCCATTTTAAATTTATTAACATGTATAGACTCCAATAGGTTCACTATTTTTTTGATTTAATAAAGTAAATGGGGTCCCTAAGACTCTTATCATAGGGACCCAATTTACTTTTTTCTGTTTATATATATATATATTAATTTACAGATGAATAATTTTCCCTTTTCAACTCTCATTTTGCTTACAGGTTTGAAATATTGCTAAATACAATATTTAAGAATGTATCTACTAAAAAAGTTATCCAATATATCTCTTATATTATCAAAAGAATTAACTTTTAGTAACAAATTAATTTTGCCAATGGACTCACACAGGTCAGGGTGCAACGTACATAACTTCGCAAGTAGAATGGAATGTTTCAGATGCAACGCTCCAAGAGACCCATTCTAA

mRNA sequence

ATGAACAGGCCGGGGGATTGGAACTGCAGATCATGCCAGCACCTGAACTTCCAACGGCGGGAGTGCTGTCAACGGTGTGGAGAATCCAAATTCGGGGCTGAATTTGGGGTGTTCGGCGGCCGAGGAAGGAGCATTCCGTCGTCGTACGGAGGAATTGCCTCGCCGGGCTCCGACGTCCGTCCCGGCGACTGGTACTGCGGTGTCGGCAACTGTGGGACCCACAACTTTGCGAACCGGTCGAGCTGCTTCGCATGCGGTGCGTTTAAGGATGAGTCAGCGGCGGCGGCGGCTGCCGGCGGAGGGCTTGATTTTGATATGTCGTCTCGTGGATCGAGGAGCTTTGGATTTGGATTTGGAAGCAATGGCTCACGTGGTGGGGCTTCTTGGAAGTCTGGTGATTGGATTTGTTCCAGGTCAGGGTGCAACGTACATAACTTCGCAAGTAGAATGGAATGTTTCAGATGCAACGCTCCAAGAGACCCATTCTAA

Coding sequence (CDS)

ATGAACAGGCCGGGGGATTGGAACTGCAGATCATGCCAGCACCTGAACTTCCAACGGCGGGAGTGCTGTCAACGGTGTGGAGAATCCAAATTCGGGGCTGAATTTGGGGTGTTCGGCGGCCGAGGAAGGAGCATTCCGTCGTCGTACGGAGGAATTGCCTCGCCGGGCTCCGACGTCCGTCCCGGCGACTGGTACTGCGGTGTCGGCAACTGTGGGACCCACAACTTTGCGAACCGGTCGAGCTGCTTCGCATGCGGTGCGTTTAAGGATGAGTCAGCGGCGGCGGCGGCTGCCGGCGGAGGGCTTGATTTTGATATGTCGTCTCGTGGATCGAGGAGCTTTGGATTTGGATTTGGAAGCAATGGCTCACGTGGTGGGGCTTCTTGGAAGTCTGGTGATTGGATTTGTTCCAGGTCAGGGTGCAACGTACATAACTTCGCAAGTAGAATGGAATGTTTCAGATGCAACGCTCCAAGAGACCCATTCTAA

Protein sequence

MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

Homology

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BLAST of Tan0017376 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.5e-09
Identity = 69/247 (27.94%), Postives = 79/247 (31.98%), Query Frame = 0


Query: 3   RPGDWNCRSCQHLNFQRRECCQRC------------GESKFGAEF---GVFGGRGRSIPS 62
           RPGDWNC  C   NFQRR  C RC            G + F  +F     +G       +
Sbjct: 343 RPGDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIA 402

Query: 63  SYGGIA----------------------------SPGSDV--RPGDWYCGVGNCGTHNFA 122
           +YGG                              S G +V  R GDW CG   CG HNFA
Sbjct: 403 NYGGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVPFRAGDWKCGSEGCGYHNFA 462

Query: 123 NRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGSRSF----------------------- 159
               C  CGA +  +A  A    G      S  S S                        
Sbjct: 463 KNVCCLRCGASRATAAVVADHASGPVNGSYSHNSYSHIPPVMSTSPPNHSVYPYSQLSIN 522

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BLAST of Tan0017376 vs. NCBI nr
Match: XP_038899251.1 (uncharacterized RNA-binding protein C17H9.04c-like [Benincasa hispida] >XP_038899252.1 uncharacterized RNA-binding protein C17H9.04c-like [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 5.9e-77
Identity = 143/163 (87.73%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIA-SPGSDV 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGE K GAE GVFGGRGR+IPSSYGG+A SPGSDV
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGELKLGAELGVFGGRGRAIPSSYGGVAYSPGSDV 60

Query: 61  RPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGSRSFGFGFG 120
           RPGDWYCGVGNCGTHNFANRS+CF CGAFKDES AAAA GGG DFD++ RGSRSFGFG  
Sbjct: 61  RPGDWYCGVGNCGTHNFANRSTCFKCGAFKDES-AAAACGGGFDFDVTCRGSRSFGFG-S 120

Query: 121 SNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           SNG RGG+SW SGDWICSRSGCNVHNFASRMECFRCNAPRD F
Sbjct: 121 SNGLRGGSSWMSGDWICSRSGCNVHNFASRMECFRCNAPRDLF 161

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BLAST of Tan0017376 vs. NCBI nr
Match: XP_023514793.1 (uncharacterized RNA-binding protein C17H9.04c-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 143/171 (83.63%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGG 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGG 60

Query: 61  IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGS 120
           +ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDES AA AAGGG DFD++ RGS
Sbjct: 61  VASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDES-AATAAGGGFDFDVAPRGS 120

Query: 121 RSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           R+  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
Sbjct: 121 RT--FGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 168

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BLAST of Tan0017376 vs. NCBI nr
Match: XP_022964373.1 (uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita moschata] >KAG7025771.1 hypothetical protein SDJN02_12269 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 142/171 (83.04%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGG 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGG 60

Query: 61  IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGS 120
           +ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDESAA AA  GG DFD++ RGS
Sbjct: 61  VASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATAAR-GGFDFDVAPRGS 120

Query: 121 RSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           RS  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRD F
Sbjct: 121 RS--FGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF 168

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BLAST of Tan0017376 vs. NCBI nr
Match: KAG6593432.1 (hypothetical protein SDJN03_12908, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 142/171 (83.04%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGG 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG
Sbjct: 9   MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGG 68

Query: 61  IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGS 120
           +ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDESAA AA  GG DFD++ RGS
Sbjct: 69  VASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATAAR-GGFDFDVAPRGS 128

Query: 121 RSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           RS  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRD F
Sbjct: 129 RS--FGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF 176

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BLAST of Tan0017376 vs. NCBI nr
Match: XP_023000400.1 (uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima])

HSP 1 Score: 287.7 bits (735), Expect = 6.1e-74
Identity = 142/173 (82.08%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG--RGRSI---------PSSY 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ GVFGG  RGRSI          SSY
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGVFGGGSRGRSISSSSSSSSSSSSY 60

Query: 61  GGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSR 120
           GG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDESAA AA  GG D D++ R
Sbjct: 61  GGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATAAR-GGFDSDVAPR 120

Query: 121 GSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           GSRS  FGFG+NGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
Sbjct: 121 GSRS--FGFGTNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 170

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BLAST of Tan0017376 vs. ExPASy TrEMBL
Match: A0A6J1HKM2 (uncharacterized RNA-binding protein C17H9.04c-like OS=Cucurbita moschata OX=3662 GN=LOC111464408 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 142/171 (83.04%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGG 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGG 60

Query: 61  IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGS 120
           +ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDESAA AA  GG DFD++ RGS
Sbjct: 61  VASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATAAR-GGFDFDVAPRGS 120

Query: 121 RSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           RS  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRD F
Sbjct: 121 RS--FGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF 168

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BLAST of Tan0017376 vs. ExPASy TrEMBL
Match: A0A6J1KI84 (uncharacterized RNA-binding protein C17H9.04c-like OS=Cucurbita maxima OX=3661 GN=LOC111494659 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74
Identity = 142/173 (82.08%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG--RGRSI---------PSSY 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ GVFGG  RGRSI          SSY
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGVFGGGSRGRSISSSSSSSSSSSSY 60

Query: 61  GGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSR 120
           GG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDESAA AA  GG D D++ R
Sbjct: 61  GGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATAAR-GGFDSDVAPR 120

Query: 121 GSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           GSRS  FGFG+NGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
Sbjct: 121 GSRS--FGFGTNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 170

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BLAST of Tan0017376 vs. ExPASy TrEMBL
Match: A0A6J1DB61 (transcription initiation factor TFIID subunit 15-like OS=Momordica charantia OX=3673 GN=LOC111018697 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 136/165 (82.42%), Postives = 144/165 (87.27%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGR---GR-SIPSSYGGIASPG 60
           MNRPGDW+CRSCQHLNFQRRECCQRCG+SKFG   G  GGR   GR S+PSSYGG+ASPG
Sbjct: 1   MNRPGDWHCRSCQHLNFQRRECCQRCGDSKFGVFAGGGGGRLATGRSSVPSSYGGVASPG 60

Query: 61  SDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA-AAAGGGLDFDMSSRGSRSFG 120
           SDVRPGDWYCGVGNCGTHNFA+RSSCF CGAFKDESAAA A AGGG DFDM SR SR  G
Sbjct: 61  SDVRPGDWYCGVGNCGTHNFASRSSCFKCGAFKDESAAAGAGAGGGFDFDM-SRASR--G 120

Query: 121 FGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD 161
           FGFG+N SR G+SWKSGDWIC+RSGCN HNFASRMECFRCN PRD
Sbjct: 121 FGFGTNASRAGSSWKSGDWICTRSGCNEHNFASRMECFRCNDPRD 162

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BLAST of Tan0017376 vs. ExPASy TrEMBL
Match: A0A0A0K718 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433230 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.1e-64
Identity = 130/169 (76.92%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGA--EFGVFGGRGRSIPSSYGG--IASPG 60
           MNRPGDWNCRSCQHLNFQRR+CCQRCGE K G   E GVF    RS  SSYGG    SPG
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRDCCQRCGEFKLGGGPELGVFS--SRSGRSSYGGGVSYSPG 60

Query: 61  SDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA--AAAGGGLDFDMSSRGSRSF 120
           SDVRPGDWYCGVGNCGTHNFANRS+CF CGAFKDESAA+  AA GGG DFD + R  RSF
Sbjct: 61  SDVRPGDWYCGVGNCGTHNFANRSTCFKCGAFKDESAASATAAGGGGFDFDATCRAFRSF 120

Query: 121 GFGFGSNGSRGGAS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           GFG  +  SRG +S W SGDWICSRSGCNVHNFASRMECFRCNAPRD F
Sbjct: 121 GFGSSNATSRGASSPWLSGDWICSRSGCNVHNFASRMECFRCNAPRDSF 167

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BLAST of Tan0017376 vs. ExPASy TrEMBL
Match: A0A5D3CJI6 (Transcription initiation factor TFIID subunit 15b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002200 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.4e-61
Identity = 129/172 (75.00%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGA--EFGVFGGR-GRSIPSSYGG--IASP 60
           MNRPGDWNCRSCQHLNFQRRECCQRCGE K G   E GVF GR GRS  SSYGG    SP
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGEFKLGGGPELGVFSGRAGRS--SSYGGGIAYSP 60

Query: 61  GSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAA----AAGGGLDFDMSSRGS 120
           GSDVRPGDWYCGV NCGTHNFANRS+CF CGAFKDESAA+A      GGG DFD++ R  
Sbjct: 61  GSDVRPGDWYCGVTNCGTHNFANRSTCFKCGAFKDESAASATGGGGGGGGFDFDVTCRAF 120

Query: 121 RSFGFGFGSNGSRGGAS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF 163
           RS    FG+  SRG  S W SGDWICSR GCNVHNFASRMECFRCNAPRD F
Sbjct: 121 RS----FGNASSRGAPSPWMSGDWICSRLGCNVHNFASRMECFRCNAPRDSF 166

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BLAST of Tan0017376 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.7e-51
Identity = 104/169 (61.54%), Postives = 117/169 (69.23%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKF------GAEFGVFGGRGRSIPSSYGGIAS 60
           M+RPGDWNCRSC HLNFQRR+ CQRCG+S+       G +FG FGGR     S++G   +
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAM---SAFG--FT 60

Query: 61  PGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAA---GGGLDFDMSSRGS 120
            GSDVRPGDWYC VGNCGTHNFA+RS+CF CG FKDE+ A       GG   FD     S
Sbjct: 61  TGSDVRPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRS 120

Query: 121 RSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD 161
           R  G G       G +SWKSGDWIC+R GCN HNFASRMECFRCNAPRD
Sbjct: 121 RVPGNG-------GRSSWKSGDWICTRIGCNEHNFASRMECFRCNAPRD 157

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BLAST of Tan0017376 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-48
Identity = 101/168 (60.12%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 1   MNRPGDWNCRSCQHLNFQRRECCQRCGESKFG--AEFGVFGGRGRSIPSSYGGIASPGSD 60
           MNRPGDWNCR C HLNFQRR+ CQRC E + G  +   + G  GR + SS+G   + G D
Sbjct: 1   MNRPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFG--FNTGPD 60

Query: 61  VRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE--SAAAAAAGGGLDFDMSSRGSRSFGF 120
           VRPGDWYC +G+CGTHNFANRSSCF CGA KDE   ++AAA  G +D ++   G R   F
Sbjct: 61  VRPGDWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNV---GPRRGLF 120

Query: 121 GFGSNGSRGGAS----WKSGDWICSRSGCNVHNFASRMECFRCNAPRD 161
           GFG + S GG +    WKSGDWIC RSGCN HNFASR ECFRCNAP++
Sbjct: 121 GFGGSSSGGGGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPKE 163

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BLAST of Tan0017376 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 8.3e-29
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 5   GDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRPGDW 64
           GDW C +CQH NF++RE CQ+CG  KFG         G  + S+Y       ++V  GDW
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPKFG---------GVDV-STY---LYNRTEVMAGDW 65

Query: 65  YCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSR 124
           YCG  NCG+HN+A+R+SC+ CG  K            +++     G++     +G++G+ 
Sbjct: 66  YCGALNCGSHNYASRTSCYRCGMIK------------VEYTEQYYGAQM--VAYGNDGAA 125

Query: 125 GGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD 161
               WK+GDW+C R GC VHN+ASR ECF+C   RD
Sbjct: 126 CPPGWKTGDWVCPRVGCGVHNYASRAECFKCKTTRD 134

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BLAST of Tan0017376 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.2e-12
Identity = 52/167 (31.14%), Postives = 74/167 (44.31%), Query Frame = 0


Query: 3   RPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRP- 62
           R GDW C  C++ N+  R  C RC + +   +                   SP S   P 
Sbjct: 5   REGDWECLGCRNRNYAFRSFCNRCKQPRLIMD----------------NNTSPNSKWLPR 64

Query: 63  -GDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAA--GGGLDFDMS--SRGSRS--- 122
            GDW C    C  +N+A+R  C  CG  K+ +A +A A  G  L   +   +RG  S   
Sbjct: 65  IGDWIC--TGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQ 124

Query: 123 ----FGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCN 157
                 F   +N +     W+SGDWIC    C  HN++SR++C +CN
Sbjct: 125 PGSLLAFSNATNQASVHKEWRSGDWICR---CGFHNYSSRIQCKKCN 150

The following BLAST results are available for this feature:

BLAST of Tan0017376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	2.5e-09	27.94	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of Tan0017376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899251.1	5.9e-77	87.73	uncharacterized RNA-binding protein C17H9.04c-like [Benincasa hispida] >XP_03889...	[more]
XP_023514793.1	1.9e-75	83.63	uncharacterized RNA-binding protein C17H9.04c-like isoform X2 [Cucurbita pepo su...	[more]
XP_022964373.1	3.6e-74	83.04	uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita moschata] >KAG7025...	[more]
KAG6593432.1	3.6e-74	83.04	hypothetical protein SDJN03_12908, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023000400.1	6.1e-74	82.08	uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima]	[more]

BLAST of Tan0017376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKM2	1.7e-74	83.04	uncharacterized RNA-binding protein C17H9.04c-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KI84	3.0e-74	82.08	uncharacterized RNA-binding protein C17H9.04c-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1DB61	1.3e-69	82.42	transcription initiation factor TFIID subunit 15-like OS=Momordica charantia OX=...	[more]
A0A0A0K718	8.1e-64	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433230 PE=4 SV=1	[more]
A0A5D3CJI6	6.4e-61	75.00	Transcription initiation factor TFIID subunit 15b-like OS=Cucumis melo var. maku...	[more]

BLAST of Tan0017376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15680.1	7.7e-51	61.54	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	1.2e-48	60.12	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G26695.1	8.3e-29	41.03	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	4.2e-12	31.14	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 5..29 e-value: 0.0055 score: 25.9 coord: 132..158 e-value: 8.5E-8 score: 41.9 coord: 62..88 e-value: 8.9E-5 score: 31.9
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 130..159 e-value: 9.2E-11 score: 40.9 coord: 60..87 e-value: 3.0E-6 score: 26.5
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 134..155
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 64..85
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 7..26
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 3..32 score: 9.088732
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 60..91 score: 9.958232
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 130..161 score: 10.816439
None	No IPR available	GENE3D	4.10.1060.10		coord: 124..161 e-value: 8.4E-13 score: 49.4 coord: 2..31 e-value: 9.6E-8 score: 33.2 coord: 54..92 e-value: 3.5E-11 score: 44.2
None	No IPR available	PANTHER	PTHR23111:SF74	OS02G0203700 PROTEIN	coord: 1..161
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..161
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 53..92
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 123..160
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017376.1	Tan0017376.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034641	cellular nitrogen compound metabolic process
biological_process	GO:0044267	cellular protein metabolic process
cellular_component	GO:0140513	nuclear protein-containing complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003723	RNA binding