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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTTCTGACCTAGTGGAGAAATCCTCAAGAAGCAGGTTGAAAAATGGTCAGACTTCTGTCCTCGATCAATTCGATCTCGATTTCCTCGACGATCCATTTTCTTTACAAGGAAAATTCGATGTCGAAGGAACATTCGATGTCGAAGGAAATTTCGACAACTAG mRNA sequence ATGGCTTCTGACCTAGTGGAGAAATCCTCAAGAAGCAGGTTGAAAAATGGTCAGACTTCTGTCCTCGATCAATTCGATCTCGATTTCCTCGACGATCCATTTTCTTTACAAGGAAAATTCGATGTCGAAGGAACATTCGATGTCGAAGGAAATTTCGACAACTAG Coding sequence (CDS) ATGGCTTCTGACCTAGTGGAGAAATCCTCAAGAAGCAGGTTGAAAAATGGTCAGACTTCTGTCCTCGATCAATTCGATCTCGATTTCCTCGACGATCCATTTTCTTTACAAGGAAAATTCGATGTCGAAGGAACATTCGATGTCGAAGGAAATTTCGACAACTAG Protein sequence MASDLVEKSSRSRLKNGQTSVLDQFDLDFLDDPFSLQGKFDVEGTFDVEGNFDN
Homology
BLAST of Lcy03g003830 vs. TAIR 10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.4 bits (93), Expect = 5.3e-04 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 0 Query: 20 SVLDQFDLDFLDDPFSLQGKFDVEGTFD 48 SV+D+ DL FLD PF QGK DVEG FD Sbjct: 37 SVIDRLDLVFLDAPFPCQGKSDVEGIFD 64
BLAST of Lcy03g003830 vs. TAIR 10
Match: AT4G24380.2 (CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 40.4 bits (93), Expect = 5.3e-04 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 0 Query: 20 SVLDQFDLDFLDDPFSLQGKFDVEGTFD 48 SV+D+ DL FLD PF QGK DVEG FD Sbjct: 37 SVIDRLDLVFLDAPFPCQGKSDVEGIFD 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
AT4G24380.1 | 5.3e-04 | 67.86 | INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and deri... | [more] |
AT4G24380.2 | 5.3e-04 | 67.86 | CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidop... | [more] |
Relationships
The following mRNA feature(s) are a part of this gene:
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