IVF0002617 (gene) Melon (IVF77) v1

Overview


Name	IVF0002617
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1
Location	chr04: 9513681 .. 9517693 (+)
RNA-Seq Expression	IVF0002617
Synteny	IVF0002617

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTCCAAATCCAAACAACTAAGCTCACTATTCCGCTCCGCCATTAAAGCTGCAAAGTCTTCAAAGAATCCCCAAGATGCCGCTCTTCAAAACAACGTTTCCTCTATCGATCCTTTATCTCTCAGCACCTCTCTCTATAACGCCATCTATAAGCGTTCCGTCAACTCCCCGACCTTCAAGAAGCTTCCCCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGTACGTGTATTGCATTTTAATACTTTAGTTATGTTACATCGTGTTTTTGTTATTTTGGTTAATGGGTCTGTAGTTAATCTTCATTCCAGCTTAATTTTGCCTTAGGCTTCGTGGTTTAGTGTTTTGTTGAAGCTGAAAAGAAGTTTTATTTTAATTATATTTCATTTGCAGTGAAGAGCAGGTGAATGACATTTGATTTATCTTGTTTTTACTTCTCCCAAAAGTTCATGTTTTAATGCAGGGGATTCTGTGAAGCATCTAACCGAGGCCATATCTTCCGTTCTGTGCGGTACGTATCATTGAATGTTTGTTGTAGGCATTTAGTCTCAATTTTTTTAAGATTTATTATAACTCGTAAATTGCAATTTTCTTCGTTAAGTTGTCAATAACCTAATAAGCATATAGTAAATATCGAAGGCCAACAGCTAAAATATCTAATGAGTTTCTTTGGCTACTAAACGTAGGGTCAGACAATTGTCCAGTCCTCGAAGGTTTGGTCCAGCTCACGTATTAAAAAAAAATGATGTTTTACCTTAGAAATTTTAGAGTGGAGTCCTCATATATTTGAGCATTAGTCTCTTTTCATTTGACCAGTTTTCTTTTAAAAAACTAGCCACTTTTTGGATCTTACGTTTCAGATTTTTAGGTTGTGTATTTCATCATTACTGTTTCAGATTTTTATGTTGTCTATTTCATCACAGCGAGAATGAGGGGATGTGAGTAATCAAATTAATTTCCTGTCGGGTTATATAAGCTGATTAAATACATTCTTATATAAGTACTACGTTTTATAAATTATTATAATTTTGATGATCAGACTGTAAAATAAAAATTTGGTTTCTTACAGGGCAGGTTTCACCATCCTAAACAAGTTTTAGAGTTGCATTTACTATTCATAATTATTTGATTTGTAATTTTCATAGACATTATTTCATACGTTATCGCCTTATTTTGCCTCCAATTATGAATCTATCTTAGTGCAGTTCTCAGTTCTTCCGTTTTCTCCAAGTGAACTGCTTTAGTAATGTATTGTTTCCTTTTGCAGAAGGCTCATCTGTTAGGTCTCCTGAAGCACAAGGAAATTGTGTTGAAAAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCACAAAGAAATATCCTGGGAAAGAAAGCAAAAATGGGTATTAAAAATACCCAGAGCGATAGATTTAGACGATTAGTTAGAAGTTGTGCAGACAGGCTGGGGAGTGATGTTACTCTTGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACGATGCACTAGTAGGTATATGTTTAGAGAAGGCTAAGGCAAGTAACGACGTGGAGGTTGTATTGGGACAGATAGGGAAGGTTTATCAGATATTTAAATCAATGAAAGAACAGGGTTTTTCTTTAGAAGATGGAACTTATGGCCCAGTGCTCGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAAATGTTGTTCTATATTAAAATCAACGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGGTACGCCCCAGTTGTTTAAGGATACACAAACCTCTGCTGCAACTTTTGTCTTCTTGCTTTGAAATAAACAATGGGGAAGTTCTGCTATCAGGAAACTTTAATTCTGTCTTAAGACAATTGTTAAATTGGCACCAAACCTAGAGGTTTAAGCTAATGGGTTTGGGTATAAGTTAATTATAATTTATATTAATACTTCAACCATAAGAAATAACCTGTTGATAAAAAGCATAAATAACAAGGGATCTTTTTTTGGCTGAGAAATTATTAGAAAGCTCTCCAATCAGCTATAGTAAAGAACAACAAGAAATAACTAAACGTCTTGGTTGCAGCCTAAAAGAAATGCATATAGTCAGGTGGCGAGTCTTTGATGTAACATGTAATATGTTTGAGACTTAAGGCCAATGATAGGTCTTGTTTGGTAACCATTTCATGTTTTTTGTTTTTGGCTTTTGAAAAGTAAGCCTATTTCCTTTCATTTTCTTATCGTGGAATTAATCTTACGTAGAAGAGTTGCATTCATAGTCAGACTTTAAAAACAATAATGAGATTTTTAAAAACTAATTTTTTTATTATTATTTTTAAAATTTTCAAACTTTGATTTGGTCTCTAAAAACATGGGTAAAAATTAGATATATCAAAGCAACAAATTTAGAGGTGGAAGAGGTATTTATAGGCTTAATTTGCAAAAATCTGAAACAAAAGTTGAAATGGTTACCAAAATGGGCCTTAGTCATTTATTGTTCTACCACAAGTTATTTTTCAAGTTGTTTTTGCAGCAAGTTATTCAAATTTGGTTTAGTTACTTCTTAGTTAGTTATTTTAAGTTATTCTTTTAAATCTCTCAAAGGCTGGTTTGTAGCCTTGAAATAGGGATCCCTAAGTTGTAAGAGGCATTAGTTCTAAGCGAGTTCTTCAAGAATTCTCTAGATTTTGTTCAAGAAATTAGTTGTACACCAGACTCTCTCCCACCTCTTTCTATACCCTGGAATATTTTAGCTTTCCTCTAGAGAATAGGGTCAGTAATGATATAGGACAATTCTTGGAAATTATTTTGAGGTTTGGAGTTCAATTTTGAAGTTGTGATAATTTTAAGGCTTTATGGACAATCAAACTTGAAATTGAATTCTTATTTAGTGTTTGCAATGAAAAATAACAAGCTAAGTGAAAGAAATTTATAATAGAAGGAACCTATAATAAACAACACCTTTGGCGTCCTCCTTGGGAAGCCAATAAAAATTCTTTGAAGTGATTAGCACAGTGTTTTCTCTGTTTAACCATTTCTGGAAAAAGGTTGTAGCTATTGTTTTAAAGATAATGCCGAGTTTATCATATTTATCAACTGGGTACATGCCAAGGGGAAGATGACCGAGTTTCCCACTTTCCCCACCTTTGTTACCTGTATAGATAAAATGATAATCTCTCTTGATACTTTCTTACACATATTATATAGTAACACACACACACACACACACTACTTTTATCCACTCATTCATCAGGTCAGTTAGTCTTACCAGTCACGATGGATATGATCTTCTACATGAGTTCTTATCCATCATGACTGGTAAGATTTCAGTACTTTCTTACACATTAATTAAGAACAAACACATCTACACACATTCACACACGACTTGTATCTAGTCCACTCATTCATCAGATCAGTTAGTCTTATTGGTCATGATGGATCTGACCTTCTACATGAGTTCAATAGGTTATGGATGTTCCATATGGCATAAGCAATTATAAAATTACAATTTACATTCCCAAACTTTTTTGATAAGCTATGGTTATGTTTTTGGTGAGGCATATATCTTACGTTGAAAAAGATACATTTCAGAGATAAACCTGTTTGGTTAAGAATTTGGAACCTTTGGTTACAGAAAATTATTTGTTGGCGCTCTGTGAAAGTGAGCAGACAAAGCAACTTTTACAGATGCTGGAGGTTATAGACATCACAAAACTTTCGACAACTGTAGTTGCACCTATCATCTTCAAATGCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTTGCTTTTGGCATTTAAAACTTCTGGTATGTTGATGATTGCCTTAAACTTTTATTAA

mRNA sequence

ATGCGTTCCAAATCCAAACAACTAAGCTCACTATTCCGCTCCGCCATTAAAGCTGCAAAGTCTTCAAAGAATCCCCAAGATGCCGCTCTTCAAAACAACGTTTCCTCTATCGATCCTTTATCTCTCAGCACCTCTCTCTATAACGCCATCTATAAGCGTTCCGTCAACTCCCCGACCTTCAAGAAGCTTCCCCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATTCTGTGAAGCATCTAACCGAGGCCATATCTTCCGTTCTGTGCGAAGGCTCATCTGTTAGGTCTCCTGAAGCACAAGGAAATTGTGTTGAAAAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCACAAAGAAATATCCTGGGAAAGAAACGATAGATTTAGACGATTAGTTAGAAGTTGTGCAGACAGGCTGGGGAGTGATGTTACTCTTGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACGATGCACTAGTAGGTATATGTTTAGAGAAGGCTAAGGCAAGTAACGACGTGGAGGTTGTATTGGGACAGATAGGGAAGGTTTATCAGATATTTAAATCAATGAAAGAACAGGGTTTTTCTTTAGAAGATGGAACTTATGGCCCAGTGCTCGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAAATGTTGTTCTATATTAAAATCAACGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCGCTCTGTGAAAGTGAGCAGACAAAGCAACTTTTACAGATGCTGGAGGTTATAGACATCACAAAACTTTCGACAACTGTAGTTGCACCTATCATCTTCAAATGCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTTGCTTTTGGCATTTAAAACTTCTGGTATGTTGATGATTGCCTTAAACTTTTATTAA

Coding sequence (CDS)

ATGCGTTCCAAATCCAAACAACTAAGCTCACTATTCCGCTCCGCCATTAAAGCTGCAAAGTCTTCAAAGAATCCCCAAGATGCCGCTCTTCAAAACAACGTTTCCTCTATCGATCCTTTATCTCTCAGCACCTCTCTCTATAACGCCATCTATAAGCGTTCCGTCAACTCCCCGACCTTCAAGAAGCTTCCCCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATTCTGTGAAGCATCTAACCGAGGCCATATCTTCCGTTCTGTGCGAAGGCTCATCTGTTAGGTCTCCTGAAGCACAAGGAAATTGTGTTGAAAAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCACAAAGAAATATCCTGGGAAAGAAACGATAGATTTAGACGATTAGTTAGAAGTTGTGCAGACAGGCTGGGGAGTGATGTTACTCTTGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACGATGCACTAGTAGGTATATGTTTAGAGAAGGCTAAGGCAAGTAACGACGTGGAGGTTGTATTGGGACAGATAGGGAAGGTTTATCAGATATTTAAATCAATGAAAGAACAGGGTTTTTCTTTAGAAGATGGAACTTATGGCCCAGTGCTCGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAAATGTTGTTCTATATTAAAATCAACGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCGCTCTGTGAAAGTGAGCAGACAAAGCAACTTTTACAGATGCTGGAGGTTATAGACATCACAAAACTTTCGACAACTGTAGTTGCACCTATCATCTTCAAATGCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTTGCTTTTGGCATTTAAAACTTCTGGTATGTTGATGATTGCCTTAAACTTTTATTAA

Protein sequence

MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSGMLMIALNFY

Homology

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BLAST of IVF0002617 vs. ExPASy Swiss-Prot
Match: Q6NQ81 (Pentatricopeptide repeat-containing protein At4g04790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g04790 PE=2 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 2.0e-51
Identity = 119/334 (35.63%), Postives = 198/334 (59.28%), Query Frame = 0


Query: 42  LSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEA-----IS 101
           ++ SL ++++K  +  PT +    + N D+   +  +++   S +S   L EA     +S
Sbjct: 6   VNKSLLSSVFKSRIR-PTGESSIASGNKDIAGTSQAVKDLLSSKNSSSDLEEASLQDRVS 65

Query: 102 SVLCEGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWERND------- 161
            +L   +S +S       +EK+L   L IP F+ K  + ++L  KE+S ER +       
Sbjct: 66  KLLHVTTSDKS------SLEKNL--FLKIPSFTTKIPYDISLRTKELSRERKERRVYKQN 125

Query: 162 ----RFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLG 221
               RF ++ R  A +LG++     F ++ +E  V EY+A++G+ LE A+ SND++  LG
Sbjct: 126 GLSRRFAKIFRDSAQKLGTEAMFGAFDRVAKEMSVTEYNAMIGVYLEHAEKSNDLDYALG 185

Query: 222 QIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGY 281
            I K +++ KSM+++GF +E+  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGY
Sbjct: 186 HIEKAFELLKSMRDRGFLIEERVYGPLLGYLIGMDMVDEFHSFKDVIREASPGSVERLGY 245

Query: 282 YKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT 341
           Y+ML +I + D EK++ELC     D+G     LQENYLLALC+ +Q   L ++LE++DIT
Sbjct: 246 YEMLLWIHLGDGEKIEELCSTIDGDNGESLSVLQENYLLALCKKDQKYHLERLLEIVDIT 305

Query: 342 KLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTS 360
           K+ ++ +   IF+ LGR SL + A + L   + S
Sbjct: 306 KVRSSDLLANIFEYLGRFSLDSVASRFLWELRES 330

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BLAST of IVF0002617 vs. ExPASy Swiss-Prot
Match: O49711 (Pentatricopeptide repeat-containing protein At4g21880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21880 PE=3 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41
Identity = 84/208 (40.38%), Postives = 131/208 (62.98%), Query Frame = 0


Query: 146 ERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLG 205
           ++++   +L + C  +LG++   EV  K+G+E G KEY+A+  +C+++A+ SND E  L 
Sbjct: 137 KQSEIMEKLAKGCVRKLGTETMFEVLTKMGKEAGEKEYNAMTKLCIQRARRSNDAEYALD 196

Query: 206 QIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGY 265
           QIGK  +  K M++ GFS+ +G YGP    L+DM+M+ EF    + IK+  P S  RL Y
Sbjct: 197 QIGKAIEHLKEMRQLGFSIGEGAYGPFFKYLVDMEMVAEFQILKDFIKEACPESCGRLVY 256

Query: 266 YKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT 325
           Y+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALCE +  +   ++LE++DIT
Sbjct: 257 YEMLLWIQVNDEEKIHKLCNKVD-DSGLSLSILQEYYLVALCEKDSKENFQKLLEIVDIT 316

Query: 326 KLSTTVVAPIIFKCLGRLSLHTFAEKLL 354
            +S+      IF  LG+  L + A KLL
Sbjct: 317 TVSSPDALKSIFGYLGKSLLESVAMKLL 343

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BLAST of IVF0002617 vs. ExPASy TrEMBL
Match: A0A5D3BES4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00710 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.5e-195
Identity = 359/370 (97.03%), Postives = 360/370 (97.30%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360

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BLAST of IVF0002617 vs. ExPASy TrEMBL
Match: A0A1S3C047 (pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494956 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.5e-195
Identity = 359/370 (97.03%), Postives = 360/370 (97.30%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360

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BLAST of IVF0002617 vs. ExPASy TrEMBL
Match: A0A0A0L854 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415080 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.8e-168
Identity = 326/379 (86.02%), Postives = 337/379 (88.92%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCEGSSV SPEAQGNCVE+SLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLH KEIS ER          +DRFRRLVRSCA+RLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEY+ALVGICLEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYG
Sbjct: 181 FGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAE 360

Query: 361 KLLLAFKTSGMLMIALNFY 370
           K LLAFKTSG LMIAL FY
Sbjct: 361 KSLLAFKTSGTLMIALKFY 371

[Close]

BLAST of IVF0002617 vs. ExPASy TrEMBL
Match: A0A1S3BYG2 (pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494956 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.7e-162
Identity = 299/311 (96.14%), Postives = 300/311 (96.46%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQEN 302
           DGVDKFSLQ N
Sbjct: 301 DGVDKFSLQGN 311

[Close]

BLAST of IVF0002617 vs. ExPASy TrEMBL
Match: A0A6J1ITU1 (pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480523 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 3.2e-140
Identity = 269/370 (72.70%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           M SKSK LSSLFRSAI A+K S+NPQDAAL+N VS+IDP S STSL  AI KRS+ S   
Sbjct: 1   MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAIDKRSIKSANS 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQ  NSDVQFPALILEE S SGDS+KHLT+AISS+LCEGSSVRSP+AQ N  E SL+
Sbjct: 61  KKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILCEGSSVRSPDAQENGDENSLK 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           +LLDIPWFS  +NHS++L  +EIS ER          N RF +LVR+CA +LG+DVTLEV
Sbjct: 121 QLLDIPWFSNISNHSISLRRREISRERKQKWIFKNSQNYRFSQLVRNCAQKLGTDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEY+AL+ ICLEKAK S D+EVVL  I KVYQ+FK MKE GF LED TYG
Sbjct: 181 FGKLGRETGVKEYNALIDICLEKAKTSKDLEVVLEHIAKVYQLFKLMKEHGFQLEDETYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLA LIDMDMMEEFNFFCEA+KDGNPGS SRLGYY+MLFY+KIND EK+QELC  AT  
Sbjct: 241 PVLAYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHATAH 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDK+SLQENYLLALCE EQ ++LLQMLE++DITKL++TV+A  IFKCLGRL LH+ AE
Sbjct: 301 DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLTSTVLAANIFKCLGRLLLHSIAE 360

[Close]

BLAST of IVF0002617 vs. NCBI nr
Match: KAA0046451.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ97763.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 687 bits (1773), Expect = 2.17e-241
Identity = 359/370 (97.03%), Postives = 360/370 (97.30%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360

[Close]

BLAST of IVF0002617 vs. NCBI nr
Match: XP_008454564.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 687 bits (1773), Expect = 3.92e-241
Identity = 359/370 (97.03%), Postives = 360/370 (97.30%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360

[Close]

BLAST of IVF0002617 vs. NCBI nr
Match: KAE8637216.1 (hypothetical protein CSA_021119 [Cucumis sativus])

HSP 1 Score: 586 bits (1511), Expect = 1.34e-208
Identity = 319/371 (85.98%), Postives = 331/371 (89.22%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCEGSSV SPEAQGNCVE+SLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLH KEIS ER          +DRFRRLVRSCA+RLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEY+ALVGICLEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYG
Sbjct: 181 FGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAE 360

[Close]

BLAST of IVF0002617 vs. NCBI nr
Match: XP_011651464.1 (pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Cucumis sativus] >XP_031745359.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like [Cucumis sativus] >KAE8650683.1 hypothetical protein Csa_010273 [Cucumis sativus])

HSP 1 Score: 586 bits (1510), Expect = 2.31e-201
Identity = 319/370 (86.22%), Postives = 330/370 (89.19%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCEGSSV SPEAQGNCVE+SLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLH KEIS ER          +DRFRRLVRSCA+RLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEY+ALVGICLEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYG
Sbjct: 181 FGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360
           DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAE 360

[Close]

BLAST of IVF0002617 vs. NCBI nr
Match: XP_008454565.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 578 bits (1491), Expect = 2.75e-199
Identity = 299/311 (96.14%), Postives = 300/311 (96.46%), Query Frame = 0


Query: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60
           MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120
           KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240
           FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

[Close]

BLAST of IVF0002617 vs. TAIR 10
Match: AT4G04790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-52
Identity = 119/334 (35.63%), Postives = 198/334 (59.28%), Query Frame = 0


Query: 42  LSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEA-----IS 101
           ++ SL ++++K  +  PT +    + N D+   +  +++   S +S   L EA     +S
Sbjct: 6   VNKSLLSSVFKSRIR-PTGESSIASGNKDIAGTSQAVKDLLSSKNSSSDLEEASLQDRVS 65

Query: 102 SVLCEGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWERND------- 161
            +L   +S +S       +EK+L   L IP F+ K  + ++L  KE+S ER +       
Sbjct: 66  KLLHVTTSDKS------SLEKNL--FLKIPSFTTKIPYDISLRTKELSRERKERRVYKQN 125

Query: 162 ----RFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLG 221
               RF ++ R  A +LG++     F ++ +E  V EY+A++G+ LE A+ SND++  LG
Sbjct: 126 GLSRRFAKIFRDSAQKLGTEAMFGAFDRVAKEMSVTEYNAMIGVYLEHAEKSNDLDYALG 185

Query: 222 QIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGY 281
            I K +++ KSM+++GF +E+  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGY
Sbjct: 186 HIEKAFELLKSMRDRGFLIEERVYGPLLGYLIGMDMVDEFHSFKDVIREASPGSVERLGY 245

Query: 282 YKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT 341
           Y+ML +I + D EK++ELC     D+G     LQENYLLALC+ +Q   L ++LE++DIT
Sbjct: 246 YEMLLWIHLGDGEKIEELCSTIDGDNGESLSVLQENYLLALCKKDQKYHLERLLEIVDIT 305

Query: 342 KLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTS 360
           K+ ++ +   IF+ LGR SL + A + L   + S
Sbjct: 306 KVRSSDLLANIFEYLGRFSLDSVASRFLWELRES 330

[Close]

BLAST of IVF0002617 vs. TAIR 10
Match: AT4G21880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 7.9e-43
Identity = 84/208 (40.38%), Postives = 131/208 (62.98%), Query Frame = 0


Query: 146 ERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLG 205
           ++++   +L + C  +LG++   EV  K+G+E G KEY+A+  +C+++A+ SND E  L 
Sbjct: 137 KQSEIMEKLAKGCVRKLGTETMFEVLTKMGKEAGEKEYNAMTKLCIQRARRSNDAEYALD 196

Query: 206 QIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGY 265
           QIGK  +  K M++ GFS+ +G YGP    L+DM+M+ EF    + IK+  P S  RL Y
Sbjct: 197 QIGKAIEHLKEMRQLGFSIGEGAYGPFFKYLVDMEMVAEFQILKDFIKEACPESCGRLVY 256

Query: 266 YKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT 325
           Y+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALCE +  +   ++LE++DIT
Sbjct: 257 YEMLLWIQVNDEEKIHKLCNKVD-DSGLSLSILQEYYLVALCEKDSKENFQKLLEIVDIT 316

Query: 326 KLSTTVVAPIIFKCLGRLSLHTFAEKLL 354
            +S+      IF  LG+  L + A KLL
Sbjct: 317 TVSSPDALKSIFGYLGKSLLESVAMKLL 343

The following BLAST results are available for this feature:

BLAST of IVF0002617 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ81	2.0e-51	35.63	Pentatricopeptide repeat-containing protein At4g04790, mitochondrial OS=Arabidop...	[more]
O49711	1.1e-41	40.38	Pentatricopeptide repeat-containing protein At4g21880, mitochondrial OS=Arabidop...	[more]

BLAST of IVF0002617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BES4	1.5e-195	97.03	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C047	1.5e-195	97.03	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isofor...	[more]
A0A0A0L854	2.8e-168	86.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415080 PE=4 SV=1	[more]
A0A1S3BYG2	1.7e-162	96.14	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isofor...	[more]
A0A6J1ITU1	3.2e-140	72.70	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isofor...	[more]

BLAST of IVF0002617 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046451.1	2.17e-241	97.03	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ97763...	[more]
XP_008454564.1	3.92e-241	97.03	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-...	[more]
KAE8637216.1	1.34e-208	85.98	hypothetical protein CSA_021119 [Cucumis sativus]	[more]
XP_011651464.1	2.31e-201	86.22	pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Cucumis sa...	[more]
XP_008454565.1	2.75e-199	96.14	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-...	[more]

BLAST of IVF0002617 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04790.1	1.4e-52	35.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21880.1	7.9e-43	40.38	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47262	OS02G0132600 PROTEIN	coord: 1..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002617.1	IVF0002617.1	mRNA