IVF0010842 (gene) Melon (IVF77) v1

Overview


Name	IVF0010842
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr04: 32029974 .. 32036636 (-)
RNA-Seq Expression	IVF0010842
Synteny	IVF0010842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCAACAGTTAAGTAGTTAATGACACACAAGCAAATAATATAAGATTGAAAGTGCGGTGTTTTGTGTTTGATGCCAAAATGGGAAGCTTTAGCGTTGTGAAGAACAGCAACAACTTCCTCAGAAAACACAGGAAGTGGCCATTTTCATCTCACAAAACCACATGGCATCAAACGTTCGATCAGGACGAAGCTTTGCGAATCCTAAAACAATCTGCCAATTCCCACCAACCCCACCTTCTTCTTTCCACTCTTATAACCTCCTTCACATCCTACTCCTGCCACCCAACCCCCAACGCCTACTACTTCGTTCTCAAAACCCTAGCTCGAACCTCCCAATTCCACCACATTCCCCCTGTTCTTCATCGCCTCCAATTCGTTGAGAAATTCCAAACCCCAGAGTACATATTTGTCGACCTCATCAAACTTTACGGACGAATGAACAGAATTCAAGACGCCGTCACTCTTTTTCGTCGGATTCCCATGTTTAGGTGCTTTCCTTCTACGCTTTCACTCAATTCTTTACTTTCCCTGCTCTCTCGAAATGCCCAAGGCCTTCCTATGATTCCTGACATCCTTTTGAATAGCCACTCTATGGGTATTAGGCTTGAACACTCCACTTTTCGGATACTAATTACTGCCTTATGTAAAGTTAATAAAGTTGGGCACGCAATGGAGATTTTCAATTATATGATAACAGAGGGTTATGGTCTCAATCCACAAATCTGCTCTTTGATATTGGGATCGCTGTGCCAACAAAAGAATTCCTCTGGTGATGTGGTTCTTAGCTTTCTGGAAGAAACGAGGCAAAAAGGATTCTGTCCCGCTGTGGTAGATTATTCTAATGTAATTAAGTTTTTCGTTACGAGAGGGATGAGTTCAGATGCTATTGACCTATTGAATAAAATGAAGGCCGATGGTTTCAAGCCTGACATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATCAAATGGCAGATGAACTGTTCGATGAATTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACGTACAACGTGTACATACATGGATTATGCAAACAAGGTAATTCGGCAGCGGGGCTTCAAATGATTTCGCATATGGAGGCACTGGGGTGCAAACCCAATGTGATTACTTACAATATTCTATTGAAAAGTTTGTGTATAACCGGTGAACTTGATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCGATGGTTTATTTCATAACGGTGAGGTAATTGAAGCCTGTGCCCTATTGGAGGAAATGCTAAGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTAGTGAGATACTTTCTCGGTTGTGCAAAAGACACATGGTAGGCAAAGCACTTGAGTTGCTCACGTTAATGGTAGGAAAGAACTTTTCCCCAGGTCCTAAGGCTTGGGAAATACTGCTCCTGAGTTCTGAAAGTGAACTAACTTCTGTTAAGAGCCTTGAAACTACTTTAAAAGATTTAGTAGGCATCTGAAGACACTCAACCTCCACGGATTTTGGAATTCTCAACTATAGAAGTCCTCTCGACCATGCTCAAACTGGTCTCTATTTTATTCTGTAATGGACCAGCCTTCGTTTTACCCTACTCTCAATAAGGTGAGGAGAAATAGCACGGTCAAATTCTATTATTGCACTGCATAATCTTTAAGAGATTCTTTTGTGGGAAATGTCTGTTTTACTAACAAGCTGGAGTGTGTGTTATTTTGTGGGTTCTTTGGGGTGAGGGAAGTATTAGAAGACATCTTTCTTCTAGTGATGTTCAATCCTGGTTAGATTCTATATTTTTCTTTCTATGATTTACTCTCTAGGTCAACTTGTATTGTTTCATTGTTTTTCAATGAAAGGTTGGTCATTTTAGAATGTAATAATAAGAATAATAAATTACAAAGAATGATACTGTTGTTCTTTAAAACCAATAAATCGTGCTTCAAGTTTCTTTAGATTGATTAAACTGTAAAAATGCTTCTCTGCTGGCAGGTGTTGCAATGCGACGTTGTGTGAGCTATATATCTGCTGGTGTTTTGGTAAAAGGAGAGAACCCACCCTTCAACTTCATGAGCTGGGCAGAGTTTACTGCAAATCAACATCTAATAGTGTAACTGTAAGTGGAAACTTAAATCAGTGCTTACTTTTTATCGTGTTAGATTATAAATCTTCATTTTCATAGAACGCAGTGCACTTTTTATGGTTCCCCATAAATATCAAAGATGATTCAGTCAATTTTTTTATTATTATTGGAACAGAAACAAGCCTTTTCATTTAAATAAAGAAATGAGACTGATGCTCAATAGACATATAATGATGACGAAACATAAATAACCAACCAAGAGATAAAATCAAGTACTAATGTGAACGTTTAGCTGTGGAATACAGGCTAATTTAAAAAGAAGGACAAACAAAGCACTACATCTTAAACAATGACTTAAATTGAATAGTTTAGAAAGATCGGAAAGAGAGCACCGAAGGAAGGAAATGACTCAAGTAAGCTCAAAAAGGCTTAACCAATGAAGTGGCGCATCTTAAAAATGTGTCACTTCAAGGGGCACCTTATATGGTTGAACTTTTCGCTAGCTTGGCAAGAAAATGAACAGGTTATTTGATCCTAATTGATTAGTCTGCTTTAAAGTATTAATAAGTGATATGTATCTCGAGCCAAGCTAATTTGAACCTACTATTATGTCATAATCGACTGGTACTGATGGGATGGATGTCATTTTGGCATCTTCTAATTAGTGGTTATTTTCAATTGGATATATCATATATTTAGTATGAAAGAACGGTGGGGGATGATGAGGATATGCTTTACCATTTAGTTTAGATAAACTATAATCAAAGCTATCTAATCCTGCATGCCTACAAAGTTAACCTCTAGTTTTTTGTATTTGATATGGCCACGGGACTTTGTTTTCCTTGTATTCTTCTACTAGAAAGTGTTAATTGTTCTTGAACAAATGGCCTGTTGCTAGTGAACTGTAACTTTTGGAAGTGTCTTCTAGATCTTAAATCAGATCAGCAAAAGTTTCTCTGGTCTACCTGCGCGAAAGGAAATTGGACTTGGAACTTTATACTCTTAGTCGAGTAAATTGGATCTCCTACCTCATTAGGCAGTCCGTGGGCTGAAATGGAGGATTTTAAAGGTTAAACCTATGTATGTTAATTTTTTTTTTTGTAGAAGCAGATGGCTACTCTTCAGAAATAGTGTCATAAACCTGTTTTCTGCCTTTCGTAATAACTTATTTTAAAAATACCTTGAAAATGTATTTCAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAGTGTTTTTAGAATAGTCCTTAATTCTTTAATAATTTTTTTTGGTTCACAGAAATGACGAGAGACAAATCATGGACAGCAAGAATAGTTGCACAGTAACTTTTGAACAATACAGAATCCTTTTTTAAACACAACTGTATCAAAAGAACTTTCAGAAAATTGTTCCACATGGAAAGCACTGAAACCGTATCTTAAGCTGATTCAACTTAGCTTTTAGTTGTTTGGTGAGAAAAGAAAAAGAACTGAAAAAGCTTCTTAGTTGACACCAATATGATGAGAAGAAGCTTTTCTCTCTCTCTCTTGAAGGCAGCTCCAAGTTGAATCTCACTCACCATCAACTTTTAGGATCTTCCCAGTTCCACTAATGGAAGTTGGAACCTGTTGTGAAATTAAAAAGTATATTTGAACGAACTTTGCATAAACATAAGGTATTGATGATTTCTCTATTTAATATTCCAAGGCCTACGCAGTTGGCTACACAAGGATGGTGGGACGTCTTTATTTCTAGTGGCTGAATACAAGTCATTACATGAAACAATAGTCAGCAAAAGAGAACTGAAAAATCATCAAAACTACATTATCTTCGAAGAGAGAGATCTTCAGAAGGATTTAGTAATATAATACCCATACACAGTTGCCTTGCTATCTTCACACTTTTGAAATTGCTCAAAATTCATTTGACTTATTGTGCTCAAAATTTGTTGAAGTTAGCTTCTGATGTCGATACAATTTAATGTTAATATTAGGTTGTTCATTGATCAAAAATATAAGAGTTACTCTTATTTATGTTCTTACCTTATCAACTGCAACTGATCCCTCTTCTGCTTGCTTTCATCCTTTTTACTTTGGTACAGTGCTCTTTGGCTTTTTTGTTGGGACAAGTGTTTCAGTGCAAGTCCCTGTGTGGATATCAAGTGGATTAATTCCACATCTATTGTGATTGATTGATGGAAGATTTAACTGGAATTTAGTGGATTTATTTCACTTATCGCAACTGATTCACATATTCTCACTCACACGCATATATCATATACATACATACATACATATGTATGTGTATATATATTTAGTGTAAGTGATTGTTTGAACTTAAAGATCGGTTGTAATTAACTTAATATTGTATTCATTTGAACATGCTTTTTAAGAAAATATGGCAGGATTCCCAGATATTAATGTAAGGTCTACTAAGGTGTATGAAGGCAATTTAGTATAGAAAAGTTCCGATTGCAAAATTCATGATATGAAATTATTTTTTCCTTTGATTGAATTCATGAATTGTACAGCTCTGGATTGTTTCATTAGTGCAGTGTCTTTTTTCTCTGCTTAGTTTCTCCCTTGAAGGAGGAGTCAATTGTGAGACAATGTACAGTGAAAGGTCACATGTTAAGACGAGAGGCGCCCCATGTGGAATAAGTTCAAAGAAGAGACGCTGAAAGTAATTGAAGCTTTCCTATTTTTTTTTTTAAGTCATAATTTGGAATTTAATTTATTTTGGTTGGAACATAGTATGACGTCAAGAACTTGTACCTTCTCTTTTTAGTTTTTCCCACGCGTGTTTGTAATTTTCAACTGTTGCATCGAATTTGAAATTGGATACTGTGGATTTTTTGTATCTTGTTCTGTTCCTTTACGCTATAAATTCCCATCTGTAATAAGTTTTAACTTTCAACAAATCAAAGAGTGATGAGAGATTGATTATTTAATTTTGAATTAACTTGAATATCATAAAATAGATATTTCAAAAGGAAAGAATTCCCCCCGAAAGAGTTAATTTATTTTGTCGTGGGGCGAATCTAGAAGTTTGTGGATCTGTCATAACACAAGCAATCGTGGCAAAGCAAAGCTGAAAGTAAGCAAGCCAAAAACTTGTTATCCCAATTATCTATTACTCCCACTTTGTCTCCCCCTCATCGGGATATTCGTAACTTTCCAGGATCCTTAATTTTCAAAATGCCCAGTAGCTCTAGCTACCACTATTACTTCTTCATTCCTATTCCCCTTTTTATAACGATGCCACAATATTTCACTCATTTTACTTTCTATTCTCTCCTATTTCTTAATCTCCTCTCTCTATAAATTTTCATTATTAGTCCCTCTAAAACATTCTGGGTTTGTTTTTAACATTAGCCCTGATAAACTTATCTTATCGGTTTTTCTTCTCTCTTTCCAAAAATAATACAAACATGCAAAGCTTAATATCATTCGGTTCATTGCACTTTTCAAGAGATATCGGATGTTTTTGGGTTACCATAATAAATACGAAATCAATTACAAGTGTAAGTTAATTACATACATTTACTTTCCATATGCTCTATTAGCTAAATAGTTTCATCTAATATCAAAACGAACGTAATTCAATTATAGATTCTATAATGTTATTATCAACCTAGATTTGATTTCCACACCTTACCTAGGTTGTTGTTGTAAAAATAATTGAAAAAAAAGAAAAACTAGCTTTATCCAACTACCCTCCCACCTGGATAATTATTTCTCAATCATTCCTGCGGAAGCAACAGCTTCTAATACAGCTATCAAAGGTATATTTATTCAGAAATATATAATATATATATAATAACAAACCAAAATATTTAAATTTGATAGTAAGAAAATAAGAGGAAATGATTTTTTTTTTTTTTTTTGAGAGGGAGAGATAAGAAAAAGAAAAAAAATGGGAGTTTTGTTGGTATACATGATTCATTACGAAATAAGATTACGACAAGACGTGGATAAATTGAAGATTAGTCAAGAATTGGACTCATCACTTTGACTCTGAATTTAATTGATGAATCACAATACGGCTTCTCCCAATCCAAGAAATTTCAATTTCATTTTTTGTTTTTGCTTTTCTTTAAAATTAATCCTCCTCATTTTCAACAACAAAAATAATAATTGCTACACCATCGGATGTATCACAAACAACAACTTATATATTGTATAATATCATTATAATATAGAGTCTTATATTGGATTATTAACTAGAATATATCAGGAAAAGAAAAGAAAAAAAAGAGTAAAATTACCTGGAAAAAAAAGGATGATATGAAAATAGGGAAGGTTGCAGTGGTCAGGATGGAGAAGAGGGGCACATGAACAACCCACTCGGAGGCAGCCACGTGGGTGTGGAGTTACATGAGTGAGTAATGCACGTGCCCTGCTTCTCCATCCTGATCGGCACGCACCTTTCTTATGCCGCCTCTCTCCGATCATTCATCTTCAAGAAATTCTTGATGGAAATCGGCGGAGGAGTAGCTGGGGGGGTTTATTTAGGTGCCTTTTTCTTTTTT

mRNA sequence

GGTCAACAGTTAAGTAGTTAATGACACACAAGCAAATAATATAAGATTGAAAGTGCGGTGTTTTGTGTTTGATGCCAAAATGGGAAGCTTTAGCGTTGTGAAGAACAGCAACAACTTCCTCAGAAAACACAGGAAGTGGCCATTTTCATCTCACAAAACCACATGGCATCAAACGTTCGATCAGGACGAAGCTTTGCGAATCCTAAAACAATCTGCCAATTCCCACCAACCCCACCTTCTTCTTTCCACTCTTATAACCTCCTTCACATCCTACTCCTGCCACCCAACCCCCAACGCCTACTACTTCGTTCTCAAAACCCTAGCTCGAACCTCCCAATTCCACCACATTCCCCCTGTTCTTCATCGCCTCCAATTCGTTGAGAAATTCCAAACCCCAGAGTACATATTTGTCGACCTCATCAAACTTTACGGACGAATGAACAGAATTCAAGACGCCGTCACTCTTTTTCGTCGGATTCCCATGTTTAGGTGCTTTCCTTCTACGCTTTCACTCAATTCTTTACTTTCCCTGCTCTCTCGAAATGCCCAAGGCCTTCCTATGATTCCTGACATCCTTTTGAATAGCCACTCTATGGGTATTAGGCTTGAACACTCCACTTTTCGGATACTAATTACTGCCTTATGTAAAGTTAATAAAGTTGGGCACGCAATGGAGATTTTCAATTATATGATAACAGAGGGTTATGGTCTCAATCCACAAATCTGCTCTTTGATATTGGGATCGCTGTGCCAACAAAAGAATTCCTCTGGTGATGTGGTTCTTAGCTTTCTGGAAGAAACGAGGCAAAAAGGATTCTGTCCCGCTGTGGTAGATTATTCTAATGTAATTAAGTTTTTCGTTACGAGAGGGATGAGTTCAGATGCTATTGACCTATTGAATAAAATGAAGGCCGATGGTTTCAAGCCTGACATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATCAAATGGCAGATGAACTGTTCGATGAATTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACGTACAACGTGTACATACATGGATTATGCAAACAAGGTAATTCGGCAGCGGGGCTTCAAATGATTTCGCATATGGAGGCACTGGGGTGCAAACCCAATGTGATTACTTACAATATTCTATTGAAAAGTTTGTGTATAACCGGTGAACTTGATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCGATGGTTTATTTCATAACGGTGAGGTAATTGAAGCCTGTGCCCTATTGGAGGAAATGCTAAGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTAGTGAGATACTTTCTCGGTTGTGCAAAAGACACATGGTAGGCAAAGCACTTGAGTTGCTCACGTTAATGGTAGGAAAGAACTTTTCCCCAGGTCCTAAGGCTTGGGAAATACTGCTCCTGAGTTCTGAAAGTGAACTAACTTCTGTTAAGAGCCTTGAAACTACTTTAAAAGATTTAGTAGGCATCTGAAGACACTCAACCTCCACGGATTTTGGAATTCTCAACTATAGAAGTCCTCTCGACCATGCTCAAACTGGTCTCTATTTTATTCTGTAATGGACCAGCCTTCGTTTTACCCTACTCTCAATAAGGTGTTGCAATGCGACGTTGTGTGAGCTATATATCTGCTGGTGTTTTGGTAAAAGGAGAGAACCCACCCTTCAACTTCATGAGCTGGGCAGAGTTTACTGCAAATCAACATCTAATAGTGTAACTGTAAGTGGAAACTTAAATCAGTGCTTACTTTTTATCGTGTTAGATTATAAATCTTCATTTTCATAGAACGCAGTGCACTTTTTATGGTTCCCCATAAATATCAAAGATGATTCAGTCAATTTTTTTATTATTATTGGAACAGAAACAAGCCTTTTCATTTAAATAAAGAAATGAGACTGATGCTCAATAGACATATAATGATGACGAAACATAAATAACCAACCAAGAGATAAAATCAAGTACTAATGTGAACGTTTAGCTGTGGAATACAGGCTAATTTAAAAAGAAGGACAAACAAAGCACTACATCTTAAACAATGACTTAAATTGAATAGTTTAGAAAGATCGGAAAGAGAGCACCGAAGGAAGGAAATGACTCAAGTAAGCTCAAAAAGGCTTAACCAATGAAGTGGCGCATCTTAAAAATGTGTCACTTCAAGGGGCACCTTATATGGTTGAACTTTTCGCTAGCTTGGCAAGAAAATGAACAGGTTATTTGATCCTAATTGATTAGTCTGCTTTAAAGTATTAATAAGTGATATGTATCTCGAGCCAAGCTAATTTGAACCTACTATTATGTCATAATCGACTGGTACTGATGGGATGGATGTCATTTTGGCATCTTCTAATTAGTGGTTATTTTCAATTGGATATATCATATATTTAGTATGAAAGAACGGTGGGGGATGATGAGGATATGCTTTACCATTTAGTTTAGATAAACTATAATCAAAGCTATCTAATCCTGCATGCCTACAAAGTTAACCTCTAGTTTTTTGTATTTGATATGGCCACGGGACTTTGTTTTCCTTGTATTCTTCTACTAGAAAGTGTTAATTGTTCTTGAACAAATGGCCTGTTGCTAGTGAACTGTAACTTTTGGAAGTGTCTTCTAGATCTTAAATCAGATCAGCAAAAGTTTCTCTGGTCTACCTGCGCGAAAGGAAATTGGACTTGGAACTTTATACTCTTAGTCGAGTAAATTGGATCTCCTACCTCATTAGGCAGTCCGTGGGCTGAAATGGAGGATTTTAAAGAAATGACGAGAGACAAATCATGGACAGCAAGAATAGTTGCACAGTAACTTTTGAACAATACAGAATCCTTTTTTAAACACAACTGTATCAAAAGAACTTTCAGAAAATTGTTCCACATGGAAAGCACTGAAACCGTATCTTAAGCTGATTCAACTTAGCTTTTAGTTGTTTGGTGAGAAAAGAAAAAGAACTGAAAAAGCTTCTTAGTTGACACCAATATGATGAGAAGAAGCTTTTCTCTCTCTCTCTTGAAGGCAGCTCCAAGTTGAATCTCACTCACCATCAACTTTTAGGATCTTCCCAGTTCCACTAATGGAAGTTGGAACCTGTTGTGAAATTAAAAAGTATATTTGAACGAACTTTGCATAAACATAAGGTATTGATGATTTCTCTATTTAATATTCCAAGGCCTACGCAGTTGGCTACACAAGGATGGTGGGACGTCTTTATTTCTAGTGGCTGAATACAAGTCATTACATGAAACAATAGTCAGCAAAAGAGAACTGAAAAATCATCAAAACTACATTATCTTCGAAGAGAGAGATCTTCAGAAGGATTTAGTAATATAATACCCATACACAGTTGCCTTGCTATCTTCACACTTTTGAAATTGCTCAAAATTCATTTGACTTATTGTGCTCAAAATTTGTTGAAGTTAGCTTCTGATGTCGATACAATTTAATGTTAATATTAGGTTGTTCATTGATCAAAAATATAAGAGTTACTCTTATTTATGTTCTTACCTTATCAACTGCAACTGATCCCTCTTCTGCTTGCTTTCATCCTTTTTACTTTGGTACAGTGCTCTTTGGCTTTTTTGTTGGGACAAGTGTTTCAGTGCAAGTCCCTGTGTGGATATCAAGTGGATTAATTCCACATCTATTGTGATTGATTGATGGAAGATTTAACTGGAATTTAGTGGATTTATTTCACTTATCGCAACTGATTCACATATTCTCACTCACACGCATATATCATATACATACATACATACATATGTATGTGTATATATATTTAGTGTAAGTGATTGTTTGAACTTAAAGATCGGTTGTAATTAACTTAATATTGTATTCATTTGAACATGCTTTTTAAGAAAATATGGCAGGATTCCCAGATATTAATGTAAGGTCTACTAAGGTGTATGAAGGCAATTTAGTATAGAAAAGTTCCGATTGCAAAATTCATGATATGAAATTATTTTTTCCTTTGATTGAATTCATGAATTGTACAGCTCTGGATTGTTTCATTAGTGCAGTGTCTTTTTTCTCTGCTTAGTTTCTCCCTTGAAGGAGGAGTCAATTGTGAGACAATGTACAGTGAAAGGTCACATGTTAAGACGAGAGGCGCCCCATGTGGAATAAGTTCAAAGAAGAGACGCTGAAAGTAATTGAAGCTTTCCTATTTTTTTTTTTAAGTCATAATTTGGAATTTAATTTATTTTGGTTGGAACATAGTATGACGTCAAGAACTTGTACCTTCTCTTTTTAGTTTTTCCCACGCGTGTTTGTAATTTTCAACTGTTGCATCGAATTTGAAATTGGATACTGTGGATTTTTTGTATCTTGTTCTGTTCCTTTACGCTATAAATTCCCATCTGTAATAAGTTTTAACTTTCAACAAATCAAAGAGTGATGAGAGATTGATTATTTAATTTTGAATTAACTTGAATATCATAAAATAGATATTTCAAAAGGAAAGAATTCCCCCCGAAAGAGTTAATTTATTTTGTCGTGGGGCGAATCTAGAAGTTTGTGGATCTGTCATAACACAAGCAATCGTGGCAAAGCAAAGCTGAAAGTAAGCAAGCCAAAAACTTGTTATCCCAATTATCTATTACTCCCACTTTGTCTCCCCCTCATCGGGATATTCGTAACTTTCCAGGATCCTTAATTTTCAAAATGCCCAGTAGCTCTAGCTACCACTATTACTTCTTCATTCCTATTCCCCTTTTTATAACGATGCCACAATATTTCACTCATTTTACTTTCTATTCTCTCCTATTTCTTAATCTCCTCTCTCTATAAATTTTCATTATTAGTCCCTCTAAAACATTCTGGGTTTGTTTTTAACATTAGCCCTGATAAACTTATCTTATCGGTTTTTCTTCTCTCTTTCCAAAAATAATACAAACATGCAAAGCTTAATATCATTCGGTTCATTGCACTTTTCAAGAGATATCGGATGTTTTTGGGTTACCATAATAAATACGAAATCAATTACAAGTGTAAGTTAATTACATACATTTACTTTCCATATGCTCTATTAGCTAAATAGTTTCATCTAATATCAAAACGAACGTAATTCAATTATAGATTCTATAATGTTATTATCAACCTAGATTTGATTTCCACACCTTACCTAGGTTGTTGTTGTAAAAATAATTGAAAAAAAAGAAAAACTAGCTTTATCCAACTACCCTCCCACCTGGATAATTATTTCTCAATCATTCCTGCGGAAGCAACAGCTTCTAATACAGCTATCAAAGGTATATTTATTCAGAAATATATAATATATATATAATAACAAACCAAAATATTTAAATTTGATAGTAAGAAAATAAGAGGAAATGATTTTTTTTTTTTTTTTTGAGAGGGAGAGATAAGAAAAAGAAAAAAAATGGGAGTTTTGTTGGTATACATGATTCATTACGAAATAAGATTACGACAAGACGTGGATAAATTGAAGATTAGTCAAGAATTGGACTCATCACTTTGACTCTGAATTTAATTGATGAATCACAATACGGCTTCTCCCAATCCAAGAAATTTCAATTTCATTTTTTGTTTTTGCTTTTCTTTAAAATTAATCCTCCTCATTTTCAACAACAAAAATAATAATTGCTACACCATCGGATGTATCACAAACAACAACTTATATATTGTATAATATCATTATAATATAGAGTCTTATATTGGATTATTAACTAGAATATATCAGGAAAAGAAAAGAAAAAAAAGAGTAAAATTACCTGGAAAAAAAAGGATGATATGAAAATAGGGAAGGTTGCAGTGGTCAGGATGGAGAAGAGGGGCACATGAACAACCCACTCGGAGGCAGCCACGTGGGTGTGGAGTTACATGAGTGAGTAATGCACGTGCCCTGCTTCTCCATCCTGATCGGCACGCACCTTTCTTATGCCGCCTCTCTCCGATCATTCATCTTCAAGAAATTCTTGATGGAAATCGGCGGAGGAGTAGCTGGGGGGGTTTATTTAGGTGCCTTTTTCTTTTTT

Coding sequence (CDS)

ATGGGAAGCTTTAGCGTTGTGAAGAACAGCAACAACTTCCTCAGAAAACACAGGAAGTGGCCATTTTCATCTCACAAAACCACATGGCATCAAACGTTCGATCAGGACGAAGCTTTGCGAATCCTAAAACAATCTGCCAATTCCCACCAACCCCACCTTCTTCTTTCCACTCTTATAACCTCCTTCACATCCTACTCCTGCCACCCAACCCCCAACGCCTACTACTTCGTTCTCAAAACCCTAGCTCGAACCTCCCAATTCCACCACATTCCCCCTGTTCTTCATCGCCTCCAATTCGTTGAGAAATTCCAAACCCCAGAGTACATATTTGTCGACCTCATCAAACTTTACGGACGAATGAACAGAATTCAAGACGCCGTCACTCTTTTTCGTCGGATTCCCATGTTTAGGTGCTTTCCTTCTACGCTTTCACTCAATTCTTTACTTTCCCTGCTCTCTCGAAATGCCCAAGGCCTTCCTATGATTCCTGACATCCTTTTGAATAGCCACTCTATGGGTATTAGGCTTGAACACTCCACTTTTCGGATACTAATTACTGCCTTATGTAAAGTTAATAAAGTTGGGCACGCAATGGAGATTTTCAATTATATGATAACAGAGGGTTATGGTCTCAATCCACAAATCTGCTCTTTGATATTGGGATCGCTGTGCCAACAAAAGAATTCCTCTGGTGATGTGGTTCTTAGCTTTCTGGAAGAAACGAGGCAAAAAGGATTCTGTCCCGCTGTGGTAGATTATTCTAATGTAATTAAGTTTTTCGTTACGAGAGGGATGAGTTCAGATGCTATTGACCTATTGAATAAAATGAAGGCCGATGGTTTCAAGCCTGACATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATCAAATGGCAGATGAACTGTTCGATGAATTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACGTACAACGTGTACATACATGGATTATGCAAACAAGGTAATTCGGCAGCGGGGCTTCAAATGATTTCGCATATGGAGGCACTGGGGTGCAAACCCAATGTGATTACTTACAATATTCTATTGAAAAGTTTGTGTATAACCGGTGAACTTGATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCGATGGTTTATTTCATAACGGTGAGGTAATTGAAGCCTGTGCCCTATTGGAGGAAATGCTAAGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTAGTGAGATACTTTCTCGGTTGTGCAAAAGACACATGGTAGGCAAAGCACTTGAGTTGCTCACGTTAATGGTAGGAAAGAACTTTTCCCCAGGTCCTAAGGCTTGGGAAATACTGCTCCTGAGTTCTGAAAGTGAACTAACTTCTGTTAAGAGCCTTGAAACTACTTTAAAAGATTTAGTAGGCATCTGA

Protein sequence

MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLITSFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRMNRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTFRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEETRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDYQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNILLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRFPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSLETTLKDLVGI

Homology

[Close]

BLAST of IVF0010842 vs. ExPASy Swiss-Prot
Match: Q8L6Y7 (Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g38420 PE=2 SV=2)

HSP 1 Score: 389.8 bits (1000), Expect = 4.5e-107
Identity = 201/443 (45.37%), Postives = 292/443 (65.91%), Query Frame = 0


Query: 11  NNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHL-LLSTLITSFTSYSCHP 70
           +NF+RK+RK P SS KT W++   Q  A+  L+ +  +   +  ++ TL++SF  ++C P
Sbjct: 11  SNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQLHNCEP 70

Query: 71  TPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRMNRIQDAVTL 130
           TP AY FV+KTLA++SQ  +I  VL+ L+  EKF TPE IF D+I  YG   RI++A+ +
Sbjct: 71  TPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEV 130

Query: 131 FRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTFRILITALC 190
           F +IP FRC PS  +LN+LL +L R  Q L ++P+IL+ +  MG+RLE STF ILI ALC
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALC 190

Query: 191 KVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEETRQKGFCPA 250
           ++ +V  A E+  YM  +   ++P++ S +L S+C+ K+SS   V+ +LE+ R+  F P 
Sbjct: 191 RIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPG 250

Query: 251 VVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDYQMADELFD 310
           + DY+ V++F V  G   + + +LN+MK D  +PD+VCYT+VL GVIAD DY  AD+LFD
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD 310

Query: 311 ELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNILLKSLCITG 370
           ELLL GL PD+YTYNVYI+GLCKQ +    L+M+S M  LG +PNV+TYNIL+K+L   G
Sbjct: 311 ELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370

Query: 371 ELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRFPPQISTFS 430
           +L  A+ L  +M+  G+  N  TF IMI       EV+ A  LLEE        + S   
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIE 430

Query: 431 EILSRLCKRHMVGKALELLTLMV 453
           E++SRLC++ ++ +A+ELL  +V
Sbjct: 431 EVISRLCEKGLMDQAVELLAHLV 453

[Close]

BLAST of IVF0010842 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 97/360 (26.94%), Postives = 175/360 (48.61%), Query Frame = 0


Query: 122 RIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTF 181
           +++ A+ +  R+    C+P  ++   L+    R++ G+     +L      G   +  T+
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRDRGCTPDVVTY 278

Query: 182 RILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEET 241
            +L+  +CK  ++  A++  N M + G   N    ++IL S+C          L  L + 
Sbjct: 279 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL--LADM 338

Query: 242 RQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDY 301
            +KGF P+VV ++ +I F   +G+   AID+L KM   G +P+ + Y  +L+G   +   
Sbjct: 339 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 398

Query: 302 QMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNIL 361
             A E  + ++  G  PDI TYN  +  LCK G     +++++ + + GC P +ITYN +
Sbjct: 399 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 458

Query: 362 LKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRF 421
           +  L   G+  +A KL  +M+ K L  +  T+  ++ GL   G+V EA     E  R   
Sbjct: 459 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 518

Query: 422 PPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSLE 481
            P   TF+ I+  LCK     +A++ L  M+ +   P   ++ IL+     E  + ++LE
Sbjct: 519 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575

[Close]

BLAST of IVF0010842 vs. ExPASy Swiss-Prot
Match: Q9CAM8 (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX=3702 GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.6e-38
Identity = 94/346 (27.17%), Postives = 174/346 (50.29%), Query Frame = 0


Query: 122 RIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTF 181
           ++ DAV LF  +   R FPS +  N LLS +++      ++  +     ++GI  +  T+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK-MNKFELVISLGEQMQTLGISHDLYTY 122

Query: 182 RILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEET 241
            I I   C+ +++  A+ +   M+  GY  +    S +L   C  K  S  V L  +++ 
Sbjct: 123 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL--VDQM 182

Query: 242 RQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDY 301
            + G+ P    ++ +I        +S+A+ L+++M   G +PD+V Y  V+NG+   GD 
Sbjct: 183 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 242

Query: 302 QMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNIL 361
            +A  L +++    +  ++  +N  I  LCK  +    + + + ME  G +PNV+TYN L
Sbjct: 243 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 302

Query: 362 LKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRF 421
           +  LC  G   +A +L S M  K +  N+ TF  +ID  F  G+++EA  L EEM++   
Sbjct: 303 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 362

Query: 422 PPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILL 468
            P   T++ +++  C  + + +A ++   MV K+  P  + +  L+
Sbjct: 363 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405

[Close]

BLAST of IVF0010842 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.8e-38
Identity = 95/346 (27.46%), Postives = 168/346 (48.55%), Query Frame = 0


Query: 122 RIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTF 181
           +  DAV LFR +   R  P+ +  N L S +++  Q   ++  +     S GI     T 
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQ-YELVLALCKQMESKGIAHSIYTL 127

Query: 182 RILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEET 241
            I+I   C+  K+ +A      ++  GY  +  I + +L  LC +   S    L  ++  
Sbjct: 128 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS--EALELVDRM 187

Query: 242 RQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDY 301
            + G  P ++  + ++      G  SDA+ L+++M   GF+P+ V Y  VLN +   G  
Sbjct: 188 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 247

Query: 302 QMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNIL 361
            +A EL  ++    +  D   Y++ I GLCK G+      + + ME  G K ++ITYN L
Sbjct: 248 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 307

Query: 362 LKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRF 421
           +   C  G  D+  KL   M  + ++ N+ TF ++ID     G++ EA  LL+EM++   
Sbjct: 308 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 367

Query: 422 PPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILL 468
            P   T++ ++   CK + + +A++++ LM+ K   P    + IL+
Sbjct: 368 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410

[Close]

BLAST of IVF0010842 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.6e-38
Identity = 98/392 (25.00%), Postives = 184/392 (46.94%), Query Frame = 0


Query: 69  PTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKF--QTPEYIFVDLIKLYGRMNRIQDA 128
           P  + +  ++K L R    H + P +  L+ +  +     E  F  +++ Y     +  A
Sbjct: 187 PDVSTFNVLIKALCRA---HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 246

Query: 129 VTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTFRILIT 188
           + +  ++  F C  S +S+N ++    +  +    +  I   S+  G   +  TF  L+ 
Sbjct: 247 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 306

Query: 189 ALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEETRQKGF 248
            LCK   V HA+EI + M+ EGY  +    + ++  LC  K       +  L++   +  
Sbjct: 307 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC--KLGEVKEAVEVLDQMITRDC 366

Query: 249 CPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDYQMADE 308
            P  V Y+ +I          +A +L   + + G  PD+  +  ++ G+    ++++A E
Sbjct: 367 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 426

Query: 309 LFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNILLKSLC 368
           LF+E+   G  PD +TYN+ I  LC +G     L M+  ME  GC  +VITYN L+   C
Sbjct: 427 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 486

Query: 369 ITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRFPPQIS 428
              +  EA ++  +M++ G++ N  T+  +IDGL  +  V +A  L+++M+     P   
Sbjct: 487 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 546

Query: 429 TFSEILSRLCKRHMVGKALELLTLMVGKNFSP 459
           T++ +L+  C+   + KA +++  M      P
Sbjct: 547 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

[Close]

BLAST of IVF0010842 vs. ExPASy TrEMBL
Match: A0A1S3B651 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486244 PE=4 SV=1)

HSP 1 Score: 978.8 bits (2529), Expect = 8.4e-282
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60
           MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120
           SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180
           NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180

Query: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240
           FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300
           TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360
           YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420
           LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420

Query: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480
           FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 481 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of IVF0010842 vs. ExPASy TrEMBL
Match: A0A5D3DN26 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00370 PE=4 SV=1)

HSP 1 Score: 978.8 bits (2529), Expect = 8.4e-282
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60
           MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120
           SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180
           NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180

Query: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240
           FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300
           TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360
           YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420
           LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420

Query: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480
           FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 481 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of IVF0010842 vs. ExPASy TrEMBL
Match: A0A5A7TL23 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005720 PE=4 SV=1)

HSP 1 Score: 975.7 bits (2521), Expect = 7.1e-281
Identity = 488/490 (99.59%), Postives = 488/490 (99.59%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60
           MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120
           SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180
           NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRN QGLPMIPDILLNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNTQGLPMIPDILLNSHSMGIRLEHST 180

Query: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240
           FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300
           TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360
           YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420
           LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC LLEEMLRSR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLRSR 420

Query: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480
           FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 481 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of IVF0010842 vs. ExPASy TrEMBL
Match: A0A0A0LA35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730720 PE=4 SV=1)

HSP 1 Score: 914.4 bits (2362), Expect = 2.0e-262
Identity = 453/490 (92.45%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60
           +GSFSVVK SNNFLRKHRKWP SSHKT WHQTFDQDEALRILKQ+AN  QPHLLLS L+T
Sbjct: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVT 61

Query: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120
           SFT+YSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQF+E FQTPEYIFVDLIKLYGRM
Sbjct: 62  SFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRM 121

Query: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180
           NRIQDAVTLFRRIPMFRC PSTLSLNSLLS LSRNAQGLP+IPDI+LNSHSMGIRLEHST
Sbjct: 122 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 181

Query: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240
           F+ILITALCKVNKVGHAME+FNYMITEGYGLNPQICSLIL SLCQQK SSGDVVL FLEE
Sbjct: 182 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 241

Query: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300
            RQKGFCPAVVDYSNVIKFFVTRGM SDA+DLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301

Query: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360
           Y+MADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AGLQMI HMEALGC+PNVITYN+
Sbjct: 302 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 361

Query: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420
           +LKSLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC LLEEML SR
Sbjct: 362 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 421

Query: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480
           FPPQISTFSEILS LCKRHMVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 422 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSL 481

Query: 481 ETTLKDLVGI 491
           ETTLKDLVGI
Sbjct: 482 ETTLKDLVGI 491

[Close]

BLAST of IVF0010842 vs. ExPASy TrEMBL
Match: A0A6J1DU83 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024060 PE=4 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.7e-226
Identity = 400/496 (80.65%), Postives = 437/496 (88.10%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSA------NSHQPHLL 60
           M SFSVVK SNNFLRKHRKWPFS +KT WHQTFDQDEALRILKQ+A      NS QP+ L
Sbjct: 1   MASFSVVKRSNNFLRKHRKWPFSPYKTKWHQTFDQDEALRILKQAANSPEQSNSDQPY-L 60

Query: 61  LSTLITSFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLI 120
           LS L++SF +Y CHPTPNAY+FVLKTLARTSQFHHIP VL RL+ VEKF+TPEYIF DLI
Sbjct: 61  LSALVSSFKAYCCHPTPNAYHFVLKTLARTSQFHHIPLVLDRLERVEKFETPEYIFADLI 120

Query: 121 KLYGRMNRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGI 180
           K YGRMNRIQDA+T+FRRIPMFRC PSTLSLN LL LL +N +G+ M+P+I+LNS +MGI
Sbjct: 121 KFYGRMNRIQDAITIFRRIPMFRCVPSTLSLNPLLFLLCKNGEGIRMVPEIILNSQAMGI 180

Query: 181 RLEHSTFRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVV 240
           RLE STFRILITALCK+N+VGHAMEIFN MITEGYGLNP ICS IL SLC+QK SS   V
Sbjct: 181 RLEESTFRILITALCKINRVGHAMEIFNNMITEGYGLNPGICSFILSSLCEQKRSSSSEV 240

Query: 241 LSFLEETRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNG 300
           LSFLE+ RQKGFCP VVDYSN+IKFFV RGMSSDA+DLLNKMKADGFKPDIV YTMVLNG
Sbjct: 241 LSFLEQMRQKGFCPCVVDYSNIIKFFVRRGMSSDALDLLNKMKADGFKPDIVSYTMVLNG 300

Query: 301 VIADGDYQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPN 360
           VI DGDY+MADELFDELLLFGL+PDIYTYNVYIHGLCKQG+  AG+QMIS ME LGCKPN
Sbjct: 301 VIGDGDYKMADELFDELLLFGLIPDIYTYNVYIHGLCKQGDPGAGIQMISRMEELGCKPN 360

Query: 361 VITYNILLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLE 420
           VITYNILL++ C T +LDEARKLRS+MQLKGLAENL TFRIMI+GLF+NGEVIEAC +LE
Sbjct: 361 VITYNILLETFCKTRKLDEARKLRSEMQLKGLAENLLTFRIMINGLFNNGEVIEACIILE 420

Query: 421 EMLRSRFPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESEL 480
           EML   FPPQISTF EILS LCKR MVGKALELLTLMVGKNFSPG KAWEILLLSS +EL
Sbjct: 421 EMLGGCFPPQISTFGEILSWLCKRGMVGKALELLTLMVGKNFSPGAKAWEILLLSSGNEL 480

Query: 481 TSVKSLETTLKDLVGI 491
           TSVKSLETTL DLVG+
Sbjct: 481 TSVKSLETTLGDLVGV 495

[Close]

BLAST of IVF0010842 vs. NCBI nr
Match: XP_008442346.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis melo] >XP_008442347.1 PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis melo] >XP_008442349.1 PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis melo] >TYK24922.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 979 bits (2530), Expect = 0.0
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60
           MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120
           SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180
           NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180

Query: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240
           FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300
           TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360
           YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420
           LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420

Query: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480
           FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 481 ETTLKDLVGI 490
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of IVF0010842 vs. NCBI nr
Match: KAA0044213.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 976 bits (2522), Expect = 0.0
Identity = 488/490 (99.59%), Postives = 488/490 (99.59%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60
           MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60

Query: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120
           SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM
Sbjct: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120

Query: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180
           NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRN QGLPMIPDILLNSHSMGIRLEHST
Sbjct: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNTQGLPMIPDILLNSHSMGIRLEHST 180

Query: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240
           FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE
Sbjct: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240

Query: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300
           TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300

Query: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360
           YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI
Sbjct: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360

Query: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420
           LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC LLEEMLRSR
Sbjct: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLRSR 420

Query: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480
           FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480

Query: 481 ETTLKDLVGI 490
           ETTLKDLVGI
Sbjct: 481 ETTLKDLVGI 490

[Close]

BLAST of IVF0010842 vs. NCBI nr
Match: XP_004137893.1 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_011651840.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_031737796.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_031737797.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >XP_031737798.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus] >KGN58708.1 hypothetical protein Csa_002344 [Cucumis sativus])

HSP 1 Score: 914 bits (2363), Expect = 0.0
Identity = 453/490 (92.45%), Postives = 469/490 (95.71%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHLLLSTLIT 60
           +GSFSVVK SNNFLRKHRKWP SSHKT WHQTFDQDEALRILKQ+AN  QPHLLLS L+T
Sbjct: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPHLLLSALVT 61

Query: 61  SFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRM 120
           SFT+YSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQF+E FQTPEYIFVDLIKLYGRM
Sbjct: 62  SFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRM 121

Query: 121 NRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHST 180
           NRIQDAVTLFRRIPMFRC PSTLSLNSLLS LSRNAQGLP+IPDI+LNSHSMGIRLEHST
Sbjct: 122 NRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHST 181

Query: 181 FRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEE 240
           F+ILITALCKVNKVGHAME+FNYMITEGYGLNPQICSLIL SLCQQK SSGDVVL FLEE
Sbjct: 182 FQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEE 241

Query: 241 TRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGD 300
            RQKGFCPAVVDYSNVIKFFVTRGM SDA+DLLNKMKADGFKPDIVCYTMVLNGVIADGD
Sbjct: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301

Query: 301 YQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNI 360
           Y+MADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AGLQMI HMEALGC+PNVITYN+
Sbjct: 302 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNV 361

Query: 361 LLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSR 420
           +LKSLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC LLEEML SR
Sbjct: 362 ILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSR 421

Query: 421 FPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSL 480
           FPPQISTFSEILS LCKRHMVGKA+ELL LMVGKNFSPGPKAWEILLLSSESELTSVKSL
Sbjct: 422 FPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELTSVKSL 481

Query: 481 ETTLKDLVGI 490
           ETTLKDLVGI
Sbjct: 482 ETTLKDLVGI 491

[Close]

BLAST of IVF0010842 vs. NCBI nr
Match: XP_038903517.1 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903518.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903520.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903521.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903522.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903523.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903524.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903525.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903526.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903527.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903528.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903529.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903530.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida] >XP_038903531.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa hispida])

HSP 1 Score: 846 bits (2186), Expect = 2.82e-307
Identity = 427/495 (86.26%), Postives = 453/495 (91.52%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPH-----LLL 60
           M SFSVVK SNNFLRKHRKWPF  +KT WH+TFDQDEALRILKQ+ANS +P       LL
Sbjct: 1   MASFSVVKKSNNFLRKHRKWPFPPYKTKWHRTFDQDEALRILKQAANSPKPPNSDEPSLL 60

Query: 61  STLITSFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIK 120
           S LITSF +Y CHPTPNAY+FVLKTLARTSQFHHI PVL RL+ VEKFQTPEYIFVDLIK
Sbjct: 61  SALITSFRAYRCHPTPNAYHFVLKTLARTSQFHHIAPVLDRLERVEKFQTPEYIFVDLIK 120

Query: 121 LYGRMNRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIR 180
           +YGRM+RIQDAVTLFRRIPMFRC PSTLSLNSLL LL RN +GL +IP+I+LNS +MGIR
Sbjct: 121 VYGRMDRIQDAVTLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIIPEIILNSQTMGIR 180

Query: 181 LEHSTFRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVL 240
           LE STFRILITALCK+NKVGHAMEIFNYMITEGYGLNP+ICSLIL S+C+QK SS DVVL
Sbjct: 181 LEDSTFRILITALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASMCEQKRSSSDVVL 240

Query: 241 SFLEETRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGV 300
           SFLEE RQKGFCP VVDYSNVIKFFVTRGMSSDA+DLLNKMKADGFKPDIVCYTMVLNGV
Sbjct: 241 SFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDAVDLLNKMKADGFKPDIVCYTMVLNGV 300

Query: 301 IADGDYQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNV 360
           IADGDY+MADELFDELLLFGLVPDIYTYNVYIHGLCKQGN  AG+QMI HME LGCKPNV
Sbjct: 301 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNLEAGIQMILHMEELGCKPNV 360

Query: 361 ITYNILLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEE 420
           ITYNILL+SLC TGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNG+VIEAC LLEE
Sbjct: 361 ITYNILLESLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGDVIEACVLLEE 420

Query: 421 MLRSRFPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELT 480
           M+ S FPPQISTF EILS LCKR MVGKALELLTLMVGKNFSPGPKAWEILLLSSESELT
Sbjct: 421 MVGSCFPPQISTFGEILSWLCKRDMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELT 480

Query: 481 SVKSLETTLKDLVGI 490
           SV+SLETTL+DLVGI
Sbjct: 481 SVQSLETTLEDLVGI 495

[Close]

BLAST of IVF0010842 vs. NCBI nr
Match: XP_022157332.1 (pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 [Momordica charantia] >XP_022157333.1 pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 795 bits (2052), Expect = 7.16e-287
Identity = 400/496 (80.65%), Postives = 437/496 (88.10%), Query Frame = 0


Query: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANS------HQPHLL 60
           M SFSVVK SNNFLRKHRKWPFS +KT WHQTFDQDEALRILKQ+ANS       QP+LL
Sbjct: 1   MASFSVVKRSNNFLRKHRKWPFSPYKTKWHQTFDQDEALRILKQAANSPEQSNSDQPYLL 60

Query: 61  LSTLITSFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLI 120
            S L++SF +Y CHPTPNAY+FVLKTLARTSQFHHIP VL RL+ VEKF+TPEYIF DLI
Sbjct: 61  -SALVSSFKAYCCHPTPNAYHFVLKTLARTSQFHHIPLVLDRLERVEKFETPEYIFADLI 120

Query: 121 KLYGRMNRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGI 180
           K YGRMNRIQDA+T+FRRIPMFRC PSTLSLN LL LL +N +G+ M+P+I+LNS +MGI
Sbjct: 121 KFYGRMNRIQDAITIFRRIPMFRCVPSTLSLNPLLFLLCKNGEGIRMVPEIILNSQAMGI 180

Query: 181 RLEHSTFRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVV 240
           RLE STFRILITALCK+N+VGHAMEIFN MITEGYGLNP ICS IL SLC+QK SS   V
Sbjct: 181 RLEESTFRILITALCKINRVGHAMEIFNNMITEGYGLNPGICSFILSSLCEQKRSSSSEV 240

Query: 241 LSFLEETRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNG 300
           LSFLE+ RQKGFCP VVDYSN+IKFFV RGMSSDA+DLLNKMKADGFKPDIV YTMVLNG
Sbjct: 241 LSFLEQMRQKGFCPCVVDYSNIIKFFVRRGMSSDALDLLNKMKADGFKPDIVSYTMVLNG 300

Query: 301 VIADGDYQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPN 360
           VI DGDY+MADELFDELLLFGL+PDIYTYNVYIHGLCKQG+  AG+QMIS ME LGCKPN
Sbjct: 301 VIGDGDYKMADELFDELLLFGLIPDIYTYNVYIHGLCKQGDPGAGIQMISRMEELGCKPN 360

Query: 361 VITYNILLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLE 420
           VITYNILL++ C T +LDEARKLRS+MQLKGLAENL TFRIMI+GLF+NGEVIEAC +LE
Sbjct: 361 VITYNILLETFCKTRKLDEARKLRSEMQLKGLAENLLTFRIMINGLFNNGEVIEACIILE 420

Query: 421 EMLRSRFPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESEL 480
           EML   FPPQISTF EILS LCKR MVGKALELLTLMVGKNFSPG KAWEILLLSS +EL
Sbjct: 421 EMLGGCFPPQISTFGEILSWLCKRGMVGKALELLTLMVGKNFSPGAKAWEILLLSSGNEL 480

Query: 481 TSVKSLETTLKDLVGI 490
           TSVKSLETTL DLVG+
Sbjct: 481 TSVKSLETTLGDLVGV 495

[Close]

BLAST of IVF0010842 vs. TAIR 10
Match: AT2G38420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 389.8 bits (1000), Expect = 3.2e-108
Identity = 201/443 (45.37%), Postives = 292/443 (65.91%), Query Frame = 0


Query: 11  NNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPHL-LLSTLITSFTSYSCHP 70
           +NF+RK+RK P SS KT W++   Q  A+  L+ +  +   +  ++ TL++SF  ++C P
Sbjct: 11  SNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQLHNCEP 70

Query: 71  TPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIKLYGRMNRIQDAVTL 130
           TP AY FV+KTLA++SQ  +I  VL+ L+  EKF TPE IF D+I  YG   RI++A+ +
Sbjct: 71  TPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEV 130

Query: 131 FRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTFRILITALC 190
           F +IP FRC PS  +LN+LL +L R  Q L ++P+IL+ +  MG+RLE STF ILI ALC
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALC 190

Query: 191 KVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEETRQKGFCPA 250
           ++ +V  A E+  YM  +   ++P++ S +L S+C+ K+SS   V+ +LE+ R+  F P 
Sbjct: 191 RIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPG 250

Query: 251 VVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDYQMADELFD 310
           + DY+ V++F V  G   + + +LN+MK D  +PD+VCYT+VL GVIAD DY  AD+LFD
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD 310

Query: 311 ELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNILLKSLCITG 370
           ELLL GL PD+YTYNVYI+GLCKQ +    L+M+S M  LG +PNV+TYNIL+K+L   G
Sbjct: 311 ELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370

Query: 371 ELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRFPPQISTFS 430
           +L  A+ L  +M+  G+  N  TF IMI       EV+ A  LLEE        + S   
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIE 430

Query: 431 EILSRLCKRHMVGKALELLTLMV 453
           E++SRLC++ ++ +A+ELL  +V
Sbjct: 431 EVISRLCEKGLMDQAVELLAHLV 453

[Close]

BLAST of IVF0010842 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 8.3e-40
Identity = 97/360 (26.94%), Postives = 175/360 (48.61%), Query Frame = 0


Query: 122 RIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTF 181
           +++ A+ +  R+    C+P  ++   L+    R++ G+     +L      G   +  T+
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRDRGCTPDVVTY 278

Query: 182 RILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEET 241
            +L+  +CK  ++  A++  N M + G   N    ++IL S+C          L  L + 
Sbjct: 279 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL--LADM 338

Query: 242 RQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDY 301
            +KGF P+VV ++ +I F   +G+   AID+L KM   G +P+ + Y  +L+G   +   
Sbjct: 339 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 398

Query: 302 QMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNIL 361
             A E  + ++  G  PDI TYN  +  LCK G     +++++ + + GC P +ITYN +
Sbjct: 399 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 458

Query: 362 LKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRF 421
           +  L   G+  +A KL  +M+ K L  +  T+  ++ GL   G+V EA     E  R   
Sbjct: 459 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 518

Query: 422 PPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELTSVKSLE 481
            P   TF+ I+  LCK     +A++ L  M+ +   P   ++ IL+     E  + ++LE
Sbjct: 519 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575

[Close]

BLAST of IVF0010842 vs. TAIR 10
Match: AT1G63150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.9e-39
Identity = 94/346 (27.17%), Postives = 174/346 (50.29%), Query Frame = 0


Query: 122 RIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTF 181
           ++ DAV LF  +   R FPS +  N LLS +++      ++  +     ++GI  +  T+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK-MNKFELVISLGEQMQTLGISHDLYTY 122

Query: 182 RILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEET 241
            I I   C+ +++  A+ +   M+  GY  +    S +L   C  K  S  V L  +++ 
Sbjct: 123 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL--VDQM 182

Query: 242 RQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDY 301
            + G+ P    ++ +I        +S+A+ L+++M   G +PD+V Y  V+NG+   GD 
Sbjct: 183 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 242

Query: 302 QMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNIL 361
            +A  L +++    +  ++  +N  I  LCK  +    + + + ME  G +PNV+TYN L
Sbjct: 243 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 302

Query: 362 LKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRF 421
           +  LC  G   +A +L S M  K +  N+ TF  +ID  F  G+++EA  L EEM++   
Sbjct: 303 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 362

Query: 422 PPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILL 468
            P   T++ +++  C  + + +A ++   MV K+  P  + +  L+
Sbjct: 363 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405

[Close]

BLAST of IVF0010842 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 4.1e-39
Identity = 95/346 (27.46%), Postives = 168/346 (48.55%), Query Frame = 0


Query: 122 RIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIRLEHSTF 181
           +  DAV LFR +   R  P+ +  N L S +++  Q   ++  +     S GI     T 
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQ-YELVLALCKQMESKGIAHSIYTL 127

Query: 182 RILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVLSFLEET 241
            I+I   C+  K+ +A      ++  GY  +  I + +L  LC +   S    L  ++  
Sbjct: 128 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS--EALELVDRM 187

Query: 242 RQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGVIADGDY 301
            + G  P ++  + ++      G  SDA+ L+++M   GF+P+ V Y  VLN +   G  
Sbjct: 188 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 247

Query: 302 QMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNVITYNIL 361
            +A EL  ++    +  D   Y++ I GLCK G+      + + ME  G K ++ITYN L
Sbjct: 248 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 307

Query: 362 LKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEEMLRSRF 421
           +   C  G  D+  KL   M  + ++ N+ TF ++ID     G++ EA  LL+EM++   
Sbjct: 308 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 367

Query: 422 PPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILL 468
            P   T++ ++   CK + + +A++++ LM+ K   P    + IL+
Sbjct: 368 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410

[Close]

BLAST of IVF0010842 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 159.8 bits (403), Expect = 5.4e-39
Identity = 96/342 (28.07%), Postives = 173/342 (50.58%), Query Frame = 0


Query: 113 LIKLYGRMNRIQDAVTLFRRIPMFRCFPSTLSLNSL---LSLLSRNAQGLPMIPDILLNS 172
           L+  Y    RI DAV L  ++      P T++  +L   L L ++ ++ + ++  ++   
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV--- 220

Query: 173 HSMGIRLEHSTFRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNS 232
              G +    T+ +++  LCK      A+ + N M       +  I + I+ SLC+ ++ 
Sbjct: 221 -QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 280

Query: 233 SGDVVLSFLEETRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYT 292
             D  L+  +E   KG  P VV YS++I    + G  SDA  LL+ M      P++V + 
Sbjct: 281 --DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 340

Query: 293 MVLNGVIADGDYQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEAL 352
            +++  + +G +  A++L+D+++   + PDI+TYN  ++G C         QM   M + 
Sbjct: 341 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 400

Query: 353 GCKPNVITYNILLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEA 412
            C P+V+TYN L+K  C +  +++  +L  +M  +GL  +  T+  +I GLFH+G+   A
Sbjct: 401 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 460

Query: 413 CALLEEMLRSRFPPQISTFSEILSRLCKRHMVGKALELLTLM 452
             + ++M+    PP I T+S +L  LC    + KALE+   M
Sbjct: 461 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496

The following BLAST results are available for this feature:

BLAST of IVF0010842 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L6Y7	4.5e-107	45.37	Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidop...	[more]
Q3EDF8	1.2e-38	26.94	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q9CAM8	2.6e-38	27.17	Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	5.8e-38	27.46	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
Q9LFF1	7.6e-38	25.00	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]

BLAST of IVF0010842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B651	8.4e-282	100.00	pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Cucumis ...	[more]
A0A5D3DN26	8.4e-282	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7TL23	7.1e-281	99.59	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0LA35	2.0e-262	92.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730720 PE=4 SV=1	[more]
A0A6J1DU83	1.7e-226	80.65	pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 ...	[more]

BLAST of IVF0010842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442346.1	0.0	100.00	PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial ...	[more]
KAA0044213.1	0.0	99.59	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_004137893.1	0.0	92.45	pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sa...	[more]
XP_038903517.1	2.82e-307	86.26	pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Benincasa ...	[more]
XP_022157332.1	7.16e-287	80.65	pentatricopeptide repeat-containing protein At2g38420, mitochondrial isoform X1 ...	[more]

BLAST of IVF0010842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38420.1	3.2e-108	45.37	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	8.3e-40	26.94	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G63150.1	1.9e-39	27.17	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	4.1e-39	27.46	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62590.1	5.4e-39	28.07	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 173..204 e-value: 1.4E-5 score: 24.8 coord: 385..416 e-value: 2.6E-5 score: 23.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 286..320 e-value: 1.9E-4 score: 19.4 coord: 321..355 e-value: 1.6E-7 score: 29.0 coord: 427..458 e-value: 0.0019 score: 16.2 coord: 253..285 e-value: 4.5E-5 score: 21.4 coord: 356..386 e-value: 1.2E-5 score: 23.1 coord: 180..211 e-value: 4.7E-5 score: 21.3 coord: 392..423 e-value: 2.7E-6 score: 25.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 427..456 e-value: 1.3 score: 9.4 coord: 113..134 e-value: 1.2 score: 9.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 248..295 e-value: 1.7E-9 score: 37.8 coord: 318..366 e-value: 6.2E-15 score: 55.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 389..423 score: 10.807899
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 424..458 score: 8.889672
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 249..283 score: 9.317163
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 284..318 score: 9.63504
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 354..388 score: 10.994242
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 319..353 score: 11.706726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 177..211 score: 9.163705
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 231..337 e-value: 3.2E-24 score: 87.3 coord: 28..159 e-value: 2.7E-6 score: 28.8 coord: 164..230 e-value: 4.8E-7 score: 31.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 338..485 e-value: 1.0E-30 score: 109.3
None	No IPR available	PANTHER	PTHR47933:SF13	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 6..479
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 6..479

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010842.2	IVF0010842.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding