IVF0021114 (gene) Melon (IVF77) v1

Overview


Name	IVF0021114
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr04: 13235782 .. 13236171 (+)
RNA-Seq Expression	IVF0021114
Synteny	IVF0021114

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATGAGGACAATGAAGAAGGAGGTGGGGTCCTCATTGTACCCCATTGAAGATGATGGGGTCCTCATTGTGCCCATGAATTGTAGCGATGTTGAAGATGGTGTGTCCCCTTATTCAATCCTTCCATTTGACAAACTTCAAACCAAAGAGTTTTGTTTCAACATACAAAGCCTCACCTCCTCCACCATGATTGAACCATTGTTAGACATGGATACGGTATGTAAAATTATTTTAGGGTTTAAAGTTTAGGGTTTACTTACTAAATTTGATGTATTGTAGGACAATGAAGCACCTCCACAACAACTTAAGAGGAAGAACGCAATTAAATTCCCCCCTCCCGTGATGCAAAGAAATCGATGGAATAGGTTCATGATTCCTTGTAAATAG

mRNA sequence

ATGACGATGAGGACAATGAAGAAGGAGGTGGGGTCCTCATTGTACCCCATTGAAGATGATGGGGTCCTCATTGTGCCCATGAATTGTAGCGATGTTGAAGATGGTGTGTCCCCTTATTCAATCCTTCCATTTGACAAACTTCAAACCAAAGAGTTTTGTTTCAACATACAAAGCCTCACCTCCTCCACCATGATTGAACCATTGTTAGACATGGATACGGACAATGAAGCACCTCCACAACAACTTAAGAGGAAGAACGCAATTAAATTCCCCCCTCCCGTGATGCAAAGAAATCGATGGAATAGGTTCATGATTCCTTGTAAATAG

Coding sequence (CDS)

ATGACGATGAGGACAATGAAGAAGGAGGTGGGGTCCTCATTGTACCCCATTGAAGATGATGGGGTCCTCATTGTGCCCATGAATTGTAGCGATGTTGAAGATGGTGTGTCCCCTTATTCAATCCTTCCATTTGACAAACTTCAAACCAAAGAGTTTTGTTTCAACATACAAAGCCTCACCTCCTCCACCATGATTGAACCATTGTTAGACATGGATACGGACAATGAAGCACCTCCACAACAACTTAAGAGGAAGAACGCAATTAAATTCCCCCCTCCCGTGATGCAAAGAAATCGATGGAATAGGTTCATGATTCCTTGTAAATAG

Protein sequence

MTMRTMKKEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEPLLDMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNRFMIPCK

Homology

[Close]

BLAST of IVF0021114 vs. ExPASy TrEMBL
Match: A0A5D3DAH4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001530 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.1e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 8   KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP 67
           KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP
Sbjct: 91  KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP 150

Query: 68  LLDMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNRFMIPCK 109
           LLDMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNRFMIPCK
Sbjct: 151 LLDMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNRFMIPCK 191

[Close]

BLAST of IVF0021114 vs. ExPASy TrEMBL
Match: A0A5D3DTY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00110 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.6e-21
Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 10  VGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEPLL 69
           V +S   IED  + +VPM+ SDVEDGV P+ IL  ++LQ KE CFNIQSLT STM EP L
Sbjct: 134 VDASEVSIEDAWIFVVPMDYSDVEDGVPPFPILSSNELQFKELCFNIQSLTFSTMSEPSL 193

Query: 70  DMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNR 103
           D + DNEA P QLKRK  +KF PP+MQRNR NR
Sbjct: 194 DKEEDNEAYPPQLKRKKLVKF-PPLMQRNRRNR 225

[Close]

BLAST of IVF0021114 vs. ExPASy TrEMBL
Match: A0A5D3BBP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001970 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.5e-18
Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 0


Query: 10  VGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEPLL 69
           V +S  PIED  +L+VPM+CSDV+DG+SP+ ILPFD+LQ K+ CFN+QSLT + +IEP L
Sbjct: 63  VDASKVPIEDIRILVVPMDCSDVQDGMSPFPILPFDELQYKKVCFNMQSLTFTILIEPSL 122

Query: 70  DMDTDNEAPPQQLKRKNAIKFP 92
           D D D +AP  + KRK ++K P
Sbjct: 123 DKDKDKKAPLPRCKRKKSVKLP 144

[Close]

BLAST of IVF0021114 vs. ExPASy TrEMBL
Match: A0A5D3BBS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00910 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 8   KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP 67
           +E  SS   I+   VLIVP++CS+VEDG+ P+ I+P D+LQ +EFCFNIQSLTSSTMI+P
Sbjct: 127 QEEESSNPTIDTLEVLIVPIDCSNVEDGMPPFPIIPSDELQFEEFCFNIQSLTSSTMIKP 186

[Close]

BLAST of IVF0021114 vs. ExPASy TrEMBL
Match: A0A5A7V440 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001140 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.5e-09
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 4   RTMKKEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSST 63
           R  K+ V +S   IE+   ++VPM+CSD+EDGVS   ILP DKLQ +E  FNIQSLTSST
Sbjct: 138 RADKRNVDTSEVSIEN---VVVPMDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSST 197

Query: 64  MIEPLLDMDTD 75
            I+P  ++  D
Sbjct: 198 TIKPSKELKKD 205

[Close]

BLAST of IVF0021114 vs. NCBI nr
Match: KAA0038039.1 (hypothetical protein E6C27_scaffold36G002390 [Cucumis melo var. makuwa] >TYK20563.1 hypothetical protein E5676_scaffold237G001530 [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (537), Expect = 1.47e-67
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 8   KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP 67
           KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP
Sbjct: 91  KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP 150

Query: 68  LLDMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNRFMIPCK 108
           LLDMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNRFMIPCK
Sbjct: 151 LLDMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNRFMIPCK 191

[Close]

BLAST of IVF0021114 vs. NCBI nr
Match: KAA0048578.1 (hypothetical protein E6C27_scaffold61G002170 [Cucumis melo var. makuwa] >TYK27166.1 hypothetical protein E5676_scaffold236G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (271), Expect = 9.96e-26
Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 10  VGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEPLL 69
           V +S   IED  + +VPM+ SDVEDGV P+ IL  ++LQ KE CFNIQSLT STM EP L
Sbjct: 134 VDASEVSIEDAWIFVVPMDYSDVEDGVPPFPILSSNELQFKELCFNIQSLTFSTMSEPSL 193

Query: 70  DMDTDNEAPPQQLKRKNAIKFPPPVMQRNRWNR 102
           D + DNEA P QLKRK  +KFPP +MQRNR NR
Sbjct: 194 DKEEDNEAYPPQLKRKKLVKFPP-LMQRNRRNR 225

[Close]

BLAST of IVF0021114 vs. NCBI nr
Match: KAA0036828.1 (hypothetical protein E6C27_scaffold20G001290 [Cucumis melo var. makuwa] >TYJ95895.1 hypothetical protein E5676_scaffold110G001970 [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (254), Expect = 3.77e-25
Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 0


Query: 10  VGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEPLL 69
           V +S  PIED  +L+VPM+CSDV+DG+SP+ ILPFD+LQ K+ CFN+QSLT + +IEP L
Sbjct: 63  VDASKVPIEDIRILVVPMDCSDVQDGMSPFPILPFDELQYKKVCFNMQSLTFTILIEPSL 122

Query: 70  DMDTDNEAPPQQLKRKNAIKFP 91
           D D D +AP  + KRK ++K P
Sbjct: 123 DKDKDKKAPLPRCKRKKSVKLP 144

[Close]

BLAST of IVF0021114 vs. NCBI nr
Match: KAA0036741.1 (hypothetical protein E6C27_scaffold20G00180 [Cucumis melo var. makuwa] >TYJ95808.1 hypothetical protein E5676_scaffold110G00910 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 4.93e-14
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 8   KEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEP 67
           +E  SS   I+   VLIVP++CS+VEDG+ P+ I+P D+LQ +EFCFNIQSLTSSTMI+P
Sbjct: 127 QEEESSNPTIDTLEVLIVPIDCSNVEDGMPPFPIIPSDELQFEEFCFNIQSLTSSTMIKP 186

[Close]

BLAST of IVF0021114 vs. NCBI nr
Match: KAA0063012.1 (hypothetical protein E6C27_scaffold468G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 1.83e-11
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 4   RTMKKEVGSSLYPIEDDGVLIVPMNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSST 63
           R  K+ V +S   IE+   ++VPM+CSD+EDGVS   ILP DKLQ +E  FNIQSLTSST
Sbjct: 138 RADKRNVDTSEVSIEN---VVVPMDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSST 197

Query: 64  MIEPLLDMDTD 74
            I+P  ++  D
Sbjct: 198 TIKPSKELKKD 205

The following BLAST results are available for this feature:

BLAST of IVF0021114 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0021114 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAH4	8.1e-52	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DTY6	9.6e-21	62.37	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BBP1	1.5e-18	57.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BBS2	2.0e-10	61.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V440	6.5e-09	53.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0021114 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038039.1	1.47e-67	100.00	hypothetical protein E6C27_scaffold36G002390 [Cucumis melo var. makuwa] >TYK2056...	[more]
KAA0048578.1	9.96e-26	62.37	hypothetical protein E6C27_scaffold61G002170 [Cucumis melo var. makuwa] >TYK2716...	[more]
KAA0036828.1	3.77e-25	57.32	hypothetical protein E6C27_scaffold20G001290 [Cucumis melo var. makuwa] >TYJ9589...	[more]
KAA0036741.1	4.93e-14	61.67	hypothetical protein E6C27_scaffold20G00180 [Cucumis melo var. makuwa] >TYJ95808...	[more]
KAA0063012.1	1.83e-11	53.52	hypothetical protein E6C27_scaffold468G001140 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0021114 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021114.1	IVF0021114.1	mRNA