IVF0026625 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCTGCGAAGTCAAAAGCAACTACACGACTTGGAACTGAAATGTGATAACTCAAATGCTCACAACCAGGGTCAGATGGACCAGCCCAAGGCTAAAATGAATGGGCTCAAAACGCATAACCAAGAGCTCAAAACGAAACTTCAAGAAATCAGGAAACAAAATGAAATGCCGATGGGTTTGGTTGAGCAAAATGAAATACTCATTGAGATATCACTTAGTGATGTACAACATCATCTTTGTACCTGA ATGCATCTGCGAAGTCAAAAGCAACTACACGACTTGGAACTGAAATGTGATAACTCAAATGCTCACAACCAGGGTCAGATGGACCAGCCCAAGGCTAAAATGAATGGGCTCAAAACGCATAACCAAGAGCTCAAAACGAAACTTCAAGAAATCAGGAAACAAAATGAAATGCCGATGGGTTTGGTTGAGCAAAATGAAATACTCATTGAGATATCACTTAGTGATGTACAACATCATCTTTGTACCTGA ATGCATCTGCGAAGTCAAAAGCAACTACACGACTTGGAACTGAAATGTGATAACTCAAATGCTCACAACCAGGGTCAGATGGACCAGCCCAAGGCTAAAATGAATGGGCTCAAAACGCATAACCAAGAGCTCAAAACGAAACTTCAAGAAATCAGGAAACAAAATGAAATGCCGATGGGTTTGGTTGAGCAAAATGAAATACTCATTGAGATATCACTTAGTGATGTACAACATCATCTTTGTACCTGA MHLRSQKQLHDLELKCDNSNAHNQGQMDQPKAKMNGLKTHNQELKTKLQEIRKQNEMPMGLVEQNEILIEISLSDVQHHLCT Homology
BLAST of IVF0026625 vs. ExPASy TrEMBL
Match: A0A5A7T3H5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001500 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 4.3e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of IVF0026625 vs. ExPASy TrEMBL
Match: A0A0A0M313 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G637940 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.2e-08 Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of IVF0026625 vs. NCBI nr
Match: KAA0038042.1 (hypothetical protein E6C27_scaffold36G002430 [Cucumis melo var. makuwa] >TYK20561.1 hypothetical protein E5676_scaffold237G001500 [Cucumis melo var. makuwa]) HSP 1 Score: 161 bits (408), Expect = 1.96e-49 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of IVF0026625 vs. NCBI nr
Match: KGN66596.1 (hypothetical protein Csa_007620 [Cucumis sativus]) HSP 1 Score: 63.9 bits (154), Expect = 2.48e-11 Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of IVF0026625 vs. NCBI nr
Match: KAA0063408.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK11667.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 48.1 bits (113), Expect = 5.22e-04 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of IVF0026625 vs. NCBI nr
Match: KGN49653.1 (hypothetical protein Csa_018510 [Cucumis sativus]) HSP 1 Score: 47.0 bits (110), Expect = 6.83e-04 Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of IVF0026625 vs. NCBI nr
Match: KAA0041296.1 (hypothetical protein E6C27_scaffold128G002890 [Cucumis melo var. makuwa] >TYK02756.1 hypothetical protein E5676_scaffold145G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 45.4 bits (106), Expect = 7.42e-04 Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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