IVF0007372 (gene) Melon (IVF77) v1

Overview


Name	IVF0007372
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	photosystem I assembly factor PSA3, chloroplastic
Location	chr04: 25827557 .. 25829553 (-)
RNA-Seq Expression	IVF0007372
Synteny	IVF0007372

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACATATATAAACGAGAGGGTGAGAATGAACAACAGTTGAGAGTCGCAGCCATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCGCCTCTTTCTCCCCCAACTTTATGGCCGCCGCCGGAGCTCGAATTCGGCCGGCGCGTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGATTTGCAAGTAAGGTGATCGGATCTCTGCCCGTGGTCGGACTGATCGCGAGAATTATGAGTGATGAAGGCGGCGTCGGCAGTGACCTTATTGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGTAAATGTGTCTCTTAATTTATGTTTATAATATCTTTTTAAATCATACTTCATTAAATTCATTATATAAATTCTTTTAAAGCTTTGCTCAGCTTACAAAAATATCTTTTTTAGTTTAGCTAAACTTTTAATTTCATAAAACTAGACCATAAATTTAAGTAATGTGTTATAATTTGTACCATAGTTTAATCATTTGCTAATTTATCTACTAATTTTAAGTTAAAAAGAATTGTGTGAAAAACTCCATAAACTCAAAAAGGTTTCATTGAAATAAAAATGTGTACTAAAATAAGTTTGACCTGAGTAAGTCAACTCATCAAATTTCAATCTTAAGAAAACATTCAACAAAAAGAAAGCTCAAGTGCCACTTTTATCTAATTTATATTTTCATTGAATCCACAGGATAATTAATTTCTCTTTTTAACTTATTTGGGGCAAGAACTAATTAAATGATTAAAATTGCAAAACTTTTCAAGGTTCAAGTGTAAAGCGTAATTTGATGAAATTGAAAGTTTAGAAGTGAAAGAGGTTGTAGTGTGCTCTAAAAAACATCAAAGATATATCGTAAATGCAACGATGTGATCAAATGAGTATTTATTAATTTAAATATATTGCAAGTTTAAGATCAAAATTACAATACTTATTAAATCAGTCCAACCAAGAAATGCAAATCATAATGTTTTGTTTTGAAGTAGAATAATTGGTTGTGATAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAGTCAGAGGAAATTTTGGAAGGAGTAGCAAGGCTTAGGATTTCAAATGATATTGAATTCGAAGAGGAGACTTTCATTGCTATGATGAATGAGGCTAGAGAGGTTTGTTACTCATATCATACATATATATTTTTCACTTTAAAGTCTCATGTTGCATAAAATAATAAAACGGTGTTCATCTATGTATAGAAACGAGAAAAACTAAAAGCGGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTCGATGCCATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTTATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACATTGCCATTGTTCCTGAGCCGCAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTCCAATTTCTCCAAGAGAAGAATGAGACTTGAGTCACAATTTAGTTTGTTTGGTTGTTTGTTGCATCGAGCTCGAAAGTTTGTAAGAGTTTGAATCTTTTGCTCCACGGTTTTCTAAGGTTGGCTGTTAATTATGGTATCTATATTATTCGATATTAGAGGAGTGAGTTTAATTAAAATCCAATTAATATAGTTTGTTCATAAATTTAAAACGTTCCTTCCGTTGAATCCATGTGACGTTGAGCATTATTTGGGATAAAAAATTTATGATGAGATACAATTTAGTTGATTCGTGAATCCAAACATAATTTAGAAGATAAGGC

mRNA sequence

ATAACATATATAAACGAGAGGGTGAGAATGAACAACAGTTGAGAGTCGCAGCCATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCGCCTCTTTCTCCCCCAACTTTATGGCCGCCGCCGGAGCTCGAATTCGGCCGGCGCGTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGATTTGCAAGTAAGGTGATCGGATCTCTGCCCGTGGTCGGACTGATCGCGAGAATTATGAGTGATGAAGGCGGCGTCGGCAGTGACCTTATTGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAGTCAGAGGAAATTTTGGAAGGAGTAGCAAGGCTTAGGATTTCAAATGATATTGAATTCGAAGAGGAGACTTTCATTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGCGGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTCGATGCCATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTTATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACATTGCCATTGTTCCTGAGCCGCAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTCCAATTTCTCCAAGAGAAGAATGAGACTTGAGTCACAATTTAGTTTGTTTGGTTGTTTGTTGCATCGAGCTCGAAAGTTTGTAAGAGTTTGAATCTTTTGCTCCACGGTTTTCTAAGGTTGGCTGTTAATTATGGTATCTATATTATTCGATATTAGAGGAGTGAGTTTAATTAAAATCCAATTAATATAGTTTGTTCATAAATTTAAAACGTTCCTTCCGTTGAATCCATGTGACGTTGAGCATTATTTGGGATAAAAAATTTATGATGAGATACAATTTAGTTGATTCGTGAATCCAAACATAATTTAGAAGATAAGGC

Coding sequence (CDS)

ATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCGCCTCTTTCTCCCCCAACTTTATGGCCGCCGCCGGAGCTCGAATTCGGCCGGCGCGTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGATTTGCAAGTAAGGTGATCGGATCTCTGCCCGTGGTCGGACTGATCGCGAGAATTATGAGTGATGAAGGCGGCGTCGGCAGTGACCTTATTGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAGTCAGAGGAAATTTTGGAAGGAGTAGCAAGGCTTAGGATTTCAAATGATATTGAATTCGAAGAGGAGACTTTCATTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGCGGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTCGATGCCATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTTATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACATTGCCATTGTTCCTGAGCCGCAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTCCAATTTCTCCAAGAGAAGAATGAGACTTGA

Protein sequence

MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET

Homology

[Close]

BLAST of IVF0007372 vs. ExPASy Swiss-Prot
Match: Q9M3C6 (Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSA3 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-84
Identity = 173/276 (62.68%), Postives = 208/276 (75.36%), Query Frame = 0


Query: 10  SSSLHSNPKSFF---LSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNSLSGFAS 69
           S+S H    SFF   L NP + S          R   +   A SI+AY+E PNS S FA+
Sbjct: 8   STSFHQISPSFFHLRLRNPSTTS--------SSRPKLDGGFALSIRAYIEKPNSFSTFAN 67

Query: 70  KVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGE 129
           KVIGSLPV+GL+ARI+SDEGGVG DL+DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGE
Sbjct: 68  KVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGE 127

Query: 130 PLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKREKLKAA 189
           PLYVLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ FIA+M EAR++R KL   
Sbjct: 128 PLYVLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNID 187

Query: 190 VPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAI 249
            P IPME+RVEKAL+ IY C F R  IEE+DEKLL +ML AVFPSV + EI+RI+KEKA 
Sbjct: 188 APTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKAT 247

Query: 250 RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKN 283
           R+ EG +   V   + L KEAI  QMKDL+FLQ++N
Sbjct: 248 RVEEGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQN 274

[Close]

BLAST of IVF0007372 vs. ExPASy Swiss-Prot
Match: B4FSG1 (Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.0e-78
Identity = 151/248 (60.89%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 34  PQLYGRRRSSNSAGAFSIKAYME-NPNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDL 93
           P  +GR R        ++ AYME NPNS +  A +++G+LP+VGL+ARI++DEGGVG D+
Sbjct: 22  PAAHGRCRRRRYR---AVVAYMEPNPNSPAAIAGRLVGALPIVGLVARILNDEGGVGGDI 81

Query: 94  IDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEG 153
           IDFAEFRRRV KKCT+M+SKAFY+F +R+GK G+P YVLLCCWLAA+GAGLLK+EEILEG
Sbjct: 82  IDFAEFRRRVSKKCTVMDSKAFYDFNQRRGKPGDPFYVLLCCWLAAIGAGLLKTEEILEG 141

Query: 154 VARLRISNDIEFEEETFIAMMNEAREKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDP 213
           VARLRISNDIEFEEETFI MM  A+EKR KLKA  P IPME R EKAL+AIYVC FG+D 
Sbjct: 142 VARLRISNDIEFEEETFIDMMRAAKEKRAKLKAPAPQIPMETRAEKALEAIYVCCFGQDM 201

Query: 214 IEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQM 273
           +E++DEKLL  +L+AVFPSVG   ++R+V   A ++A G+      + + +SKE    Q+
Sbjct: 202 VEDEDEKLLRAILNAVFPSVGRAAVERMVASMAKQVASGER---KRDGRTVSKEVQQRQL 261

Query: 274 KDLQFLQE 281
           KDL+FL++
Sbjct: 262 KDLEFLKQ 263

[Close]

BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A5D3CQC9 (Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00270 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.8e-149
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A1S3B876 (uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.8e-149
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A0A0LCC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.6e-142
Identity = 269/284 (94.72%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPK FFLSNPISPS LFL +LYGRRR+ NSAGAFSIKAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARI+SDEGGVG+D+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           +KEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE NET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

[Close]

BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A6J1EQR9 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435039 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.3e-125
Identity = 243/287 (84.67%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLY---GRRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTT SS HSNPKSFFL + ISP +L   Q +   GRRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTT-SSFHSNPKSFFLYSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFL+E +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLRENSET 286

[Close]

BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A6J1JJA4 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486319 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.1e-123
Identity = 240/287 (83.62%), Postives = 261/287 (90.94%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLY---GRRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTT SS HSNPKSFFLS+ ISP +L   Q +   GRRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTT-SSFHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEI EGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEIFEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AV  IPMEVRVEKALDAIYVCSFGRDPIEE DEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVSKIPMEVRVEKALDAIYVCSFGRDPIEEHDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           QR+VKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE + T
Sbjct: 241 QRMVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSGT 286

[Close]

BLAST of IVF0007372 vs. NCBI nr
Match: XP_008443515.1 (PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa] >TYK14001.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa])

HSP 1 Score: 537 bits (1384), Expect = 4.41e-192
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of IVF0007372 vs. NCBI nr
Match: XP_004141087.1 (photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 hypothetical protein Csa_000816 [Cucumis sativus])

HSP 1 Score: 513 bits (1321), Expect = 1.76e-182
Identity = 269/284 (94.72%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPK FFLSNPISPS LFL +LYGRRR+ NSAGAFSIKAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARI+SDEGGVG+D+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           +KEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE NET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

[Close]

BLAST of IVF0007372 vs. NCBI nr
Match: XP_038905081.1 (photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida])

HSP 1 Score: 504 bits (1297), Expect = 8.02e-179
Identity = 266/284 (93.66%), Postives = 273/284 (96.13%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTS+TSSSLHSN KSFFLS PISPSRLFL Q+YGRRR SNSAG  S+KAYMENPNS
Sbjct: 1   MSVTSTSSTSSSLHSNLKSFFLSKPISPSRLFLRQIYGRRRQSNSAGVLSVKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLK AVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SV E EIQRI
Sbjct: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVRETEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEK ET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 284

[Close]

BLAST of IVF0007372 vs. NCBI nr
Match: KAG7022731.1 (hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461 bits (1187), Expect = 4.94e-162
Identity = 244/287 (85.02%), Postives = 265/287 (92.33%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYG---RRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTTSS  HSNPKSFFLS+ ISP +L   Q +G   RRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTTSS-FHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVRVEKALDAIYVCSFGRDPIEE+DEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEEDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]

BLAST of IVF0007372 vs. NCBI nr
Match: KAG6588962.1 (Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 461 bits (1187), Expect = 4.94e-162
Identity = 244/287 (85.02%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYG---RRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTTSS  HSNPKSFFLS+ ISP +    Q +G   RRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTTSS-FHSNPKSFFLSSLISPPKFLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]

BLAST of IVF0007372 vs. TAIR 10
Match: AT3G55250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 314.7 bits (805), Expect = 7.6e-86
Identity = 173/276 (62.68%), Postives = 208/276 (75.36%), Query Frame = 0


Query: 10  SSSLHSNPKSFF---LSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNSLSGFAS 69
           S+S H    SFF   L NP + S          R   +   A SI+AY+E PNS S FA+
Sbjct: 8   STSFHQISPSFFHLRLRNPSTTS--------SSRPKLDGGFALSIRAYIEKPNSFSTFAN 67

Query: 70  KVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGE 129
           KVIGSLPV+GL+ARI+SDEGGVG DL+DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGE
Sbjct: 68  KVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGE 127

Query: 130 PLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKREKLKAA 189
           PLYVLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ FIA+M EAR++R KL   
Sbjct: 128 PLYVLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNID 187

Query: 190 VPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAI 249
            P IPME+RVEKAL+ IY C F R  IEE+DEKLL +ML AVFPSV + EI+RI+KEKA 
Sbjct: 188 APTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKAT 247

Query: 250 RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKN 283
           R+ EG +   V   + L KEAI  QMKDL+FLQ++N
Sbjct: 248 RVEEGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQN 274

The following BLAST results are available for this feature:

BLAST of IVF0007372 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3C6	1.1e-84	62.68	Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
B4FSG1	2.0e-78	60.89	Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE...	[more]

BLAST of IVF0007372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQC9	3.8e-149	100.00	Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B876	3.8e-149	100.00	uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=...	[more]
A0A0A0LCC2	7.6e-142	94.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1	[more]
A0A6J1EQR9	1.3e-125	84.67	photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JJA4	2.1e-123	83.62	photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of IVF0007372 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443515.1	4.41e-192	100.00	PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 put...	[more]
XP_004141087.1	1.76e-182	94.72	photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 ...	[more]
XP_038905081.1	8.02e-179	93.66	photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida]	[more]
KAG7022731.1	4.94e-162	85.02	hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588962.1	4.94e-162	85.02	Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosper...	[more]

BLAST of IVF0007372 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55250.1	7.6e-86	62.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037736	Photosystem I assembly factor PSA3	PANTHER	PTHR36770	PHOTOSYSTEM I ASSEMBLY FACTOR PSA3, CHLOROPLASTIC	coord: 40..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007372.1	IVF0007372.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0098572	stromal side of plastid thylakoid membrane