Tan0007096 (gene) Snake gourd v1

Overview


Name	Tan0007096
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Nucleotide-sugar transporter
Location	LG07: 66894822 .. 66895576 (+)
RNA-Seq Expression	Tan0007096
Synteny	Tan0007096

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAATGATTTTTTTTTAAAAGTATACCAATGATATATATATTAGAAGAAAATACTTCTTTGTAGGTTGGAATATTTCCCTTTATTTATAATATAATATTATAATAAAAGAAAATAGAACTAAAAATGTAATTTAACCAAAATATTTCATGATGGCTTTCAACCTACAACATAAATACACTCCACCTACTAACTAAACTCAAATCATTCATTTCTCCAAAAGGCCTATAAATTAAGGCCAACCTTTCCACCACCACCAGTTGCATTTGCAAGACAAAGTAAACATTCCAACAAGAGACCTAACTGCATGCCGGAGAAGATGAGCAGAATAATGGGCTGTATCGACGCCGCTCGGTGCGCCGTGATCGGGTCCGAGCAGCAGCGAGTGATCGTCAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTATCCAAGGTACAAGAGGAGTGACTATGAGAGCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGATCATTATATGAAAAAACTTTAAACCCTAAACCATCAAGTTTACTAATTACTGTTAGCTACTGTGTTTGTGTTAATTAGTGTGTTCCTATGAAAAATTAAGAGTGTGTTTTTTAAGTTTTTAACTCTTGTTGCTTTTTTTTAGTAGGGTGAAATTACTGGGATGTTAATTTTTTT

mRNA sequence

GAAAAAATGATTTTTTTTTAAAAGTATACCAATGATATATATATTAGAAGAAAATACTTCTTTGTAGGTTGGAATATTTCCCTTTATTTATAATATAATATTATAATAAAAGAAAATAGAACTAAAAATGTAATTTAACCAAAATATTTCATGATGGCTTTCAACCTACAACATAAATACACTCCACCTACTAACTAAACTCAAATCATTCATTTCTCCAAAAGGCCTATAAATTAAGGCCAACCTTTCCACCACCACCAGTTGCATTTGCAAGACAAAGTAAACATTCCAACAAGAGACCTAACTGCATGCCGGAGAAGATGAGCAGAATAATGGGCTGTATCGACGCCGCTCGGTGCGCCGTGATCGGGTCCGAGCAGCAGCGAGTGATCGTCAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTATCCAAGGTACAAGAGGAGTGACTATGAGAGCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGATCATTATATGAAAAAACTTTAAACCCTAAACCATCAAGTTTACTAATTACTGTTAGCTACTGTGTTTGTGTTAATTAGTGTGTTCCTATGAAAAATTAAGAGTGTGTTTTTTAAGTTTTTAACTCTTGTTGCTTTTTTTTAGTAGGGTGAAATTACTGGGATGTTAATTTTTTT

Coding sequence (CDS)

ATGCCGGAGAAGATGAGCAGAATAATGGGCTGTATCGACGCCGCTCGGTGCGCCGTGATCGGGTCCGAGCAGCAGCGAGTGATCGTCAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTATCCAAGGTACAAGAGGAGTGACTATGAGAGCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGA

Protein sequence

MPEKMSRIMGCIDAARCAVIGSEQQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

Homology

[Close]

BLAST of Tan0007096 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata])

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-35
Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 5  MSRIMGCIDAARCAVIGSE------QQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLD 64
          MSRIM  +DAARCAVIG+E      QQRVI KQFD FQMPLHYP+YKRSDYE M EWKLD
Sbjct: 1  MSRIMSWVDAARCAVIGAEQPQQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLD 60

Query: 65 CLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY 91
          CLLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Sbjct: 61 CLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 92

[Close]

BLAST of Tan0007096 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34
Identity = 75/91 (82.42%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 5  MSRIMGCIDAARCAVIGSE-----QQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDC 64
          MSRIM  + AARCAVIG+E     QQRVI KQFD FQMPLHYP+YKRSDYE M EWKLDC
Sbjct: 1  MSRIMSWVYAARCAVIGAEQPQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLDC 60

Query: 65 LLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY 91
          LLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Sbjct: 61 LLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 91

[Close]

BLAST of Tan0007096 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34
Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = 0


Query: 5  MSRIMGCIDAARCAVIGSE-------QQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKL 64
          MSRIM  + AARCAVIG+E       QQRVI KQFD FQMPLHYP+YKRSDYE M EWKL
Sbjct: 1  MSRIMSWVYAARCAVIGAEQPQQQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKL 60

Query: 65 DCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY 91
          DCLLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Sbjct: 61 DCLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 93

[Close]

BLAST of Tan0007096 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34
Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 9  MGCIDAARCAVIGSEQQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPV 68
          M C DAARC++IGSE Q+   K  DQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+
Sbjct: 1  MSCADAARCSMIGSEHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPI 60

Query: 69 AGDVAQKRKFAMGAFLWPCEMY 91
           GDVAQKRKFAMGAFLWPCEMY
Sbjct: 61 VGDVAQKRKFAMGAFLWPCEMY 82

[Close]

BLAST of Tan0007096 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 3.8e-33
Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 9  MGCIDAARCAVIGSEQQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPV 68
          M C DAARC++IGSE Q+   K FDQFQMPLHYPRY+RSDYE MPEWKLDCLLKEYGLPV
Sbjct: 1  MSCADAARCSMIGSEHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEYGLPV 60

Query: 69 AGDVAQKRKFAMGAFLWPCEM 90
           GDVAQKRKFAMGAFLWPCE+
Sbjct: 61 VGDVAQKRKFAMGAFLWPCEI 81

[Close]

BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 72/86 (83.72%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 5  MSRIMGCIDAARCAVIGSEQQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDCLLKEY 64
          MS IM C DAARC++IGSE Q+   K FDQFQMPLHYPRY+RSDYE MPEWKLDCLLKEY
Sbjct: 1  MSGIMSCADAARCSMIGSEHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEY 60

Query: 65 GLPVAGDVAQKRKFAMGAFLWPCEMY 91
          GLPV GDVAQKRKFAMGAFLWPCEMY
Sbjct: 61 GLPVVGDVAQKRKFAMGAFLWPCEMY 86

[Close]

BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.0e-35
Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 5  MSRIMGCIDAARCAVIGSE------QQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLD 64
          MSRIM  +DAARCAVIG+E      QQRVI KQFD FQMPLHYP+YKRSDYE M EWKLD
Sbjct: 1  MSRIMSWVDAARCAVIGAEQPQQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLD 60

Query: 65 CLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY 91
          CLLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Sbjct: 61 CLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 92

[Close]

BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34
Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 9  MGCIDAARCAVIGSEQQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPV 68
          M C DAARC++IGSE Q+   K  DQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+
Sbjct: 1  MSCADAARCSMIGSEHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPI 60

Query: 69 AGDVAQKRKFAMGAFLWPCEMY 91
           GDVAQKRKFAMGAFLWPCEMY
Sbjct: 61 VGDVAQKRKFAMGAFLWPCEMY 82

[Close]

BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.0e-29
Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1  MPEKMSRIMGCIDAARCAVIGSEQQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDCL 60
          +PEK   +MG ++         +QQ+ + KQF QFQMPLHYPRYK+SDYE+MPEWKLDCL
Sbjct: 4  LPEKTIGMMGGVE---------QQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCL 63

Query: 61 LKEYGLPVAGDVAQKRKFAMGAFLWPCEMY 91
          LKEYGLP+ GDVAQKRKFAMGAFLWPC+ Y
Sbjct: 64 LKEYGLPIVGDVAQKRKFAMGAFLWPCDQY 84

[Close]

BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A6I9T0H3 (uncharacterized protein LOC105158521 OS=Sesamum indicum OX=4182 GN=LOC105158521 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22
Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 10 GCIDAARCAVI-------GSEQQRVIVKQFDQ----FQMPLHYPRYKRSDYESMPEWKLD 69
          G   +A CA +       G +QQ+++    +     FQMPLHYPRYK+SDYE MPEW+LD
Sbjct: 4  GAAASAACATVNGGVRPNGHQQQQLVSSVMNTKGCGFQMPLHYPRYKKSDYEKMPEWQLD 63

Query: 70 CLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM 90
          CLLKEYGLPVAGDV QKRKFAMGAFLWP ++
Sbjct: 64 CLLKEYGLPVAGDVHQKRKFAMGAFLWPDQL 94

[Close]

BLAST of Tan0007096 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 8.7e-20
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 31 QFDQFQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCE 89
          Q   FQ+PLHYP+Y +SDYE MPEW+LD LL+EYGLPV GD  +KRKFA+GAFLW  E
Sbjct: 41 QSSSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLWSSE 98

[Close]

BLAST of Tan0007096 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 9.1e-17
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 35 FQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLW 86
          F+MPLHYPRY + DY+ MPEWKLD +L +YGL   GD+A KR FA+GAFLW
Sbjct: 32 FRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIGAFLW 82

[Close]

BLAST of Tan0007096 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 4.6e-13
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 35  FQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM 90
           FQ+PLHYP+Y +SDYE M + +LD LLK+YG    G +  KR FA+ +FLWP ++
Sbjct: 47  FQVPLHYPKYSKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWPDQL 101

[Close]

BLAST of Tan0007096 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 6.1e-13
Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 35 FQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPVAGD--VAQKRKFAMGAFLWP 87
          F+MPLHYPRY + DYE M EW+LD LL EYGL    D  + +KR FA+  F+WP
Sbjct: 36 FKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNTLHEKRAFAIDTFIWP 89

[Close]

BLAST of Tan0007096 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 35  FQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPV-AGDVAQKRKFAMGAFLW 86
           FQMPL YP Y +  Y+ M E +LD LLK YGLP   G+++ K++FA+GAFLW
Sbjct: 57  FQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLW 108

The following BLAST results are available for this feature:

BLAST of Tan0007096 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0007096 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958391.1	4.1e-35	82.61	uncharacterized protein LOC111459627 [Cucurbita moschata]	[more]
KAG6606051.1	3.4e-34	82.42	hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7035999.1	5.9e-34	80.65	hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAA0042696.1	5.9e-34	82.93	hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK0610...	[more]
KAE8647840.1	3.8e-33	82.72	hypothetical protein Csa_000107 [Cucumis sativus]	[more]

BLAST of Tan0007096 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMG0	5.2e-36	83.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1	[more]
A0A6J1H1Y5	2.0e-35	82.61	uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A5D3C447	2.8e-34	82.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CXF4	8.0e-29	67.78	uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6I9T0H3	1.5e-22	60.44	uncharacterized protein LOC105158521 OS=Sesamum indicum OX=4182 GN=LOC105158521 ...	[more]

BLAST of Tan0007096 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41761.1	8.7e-20	68.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G55570.1	9.1e-17	66.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G55620.1	4.6e-13	52.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G09950.1	6.1e-13	57.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11405.1	2.2e-10	55.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33513	OS06G0523300 PROTEIN	coord: 14..88
None	No IPR available	PANTHER	PTHR33513:SF31	SUBFAMILY NOT NAMED	coord: 14..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007096.1	Tan0007096.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008643	carbohydrate transport