Pay0011399 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011399
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	E3 ubiquitin-protein ligase RNF34
Location	chr06: 34190009 .. 34192181 (+)
RNA-Seq Expression	Pay0011399
Synteny	Pay0011399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTCCGCAGACCCATTACTTTTCTTAAACCCTACTTCACGCGTTCAGCCATTGCGTATCCAACCTGACGCCGTCCCAGTGGGTGCCGGAAGCCTTCCGACGTCTATTCAACTCTCCCTTCCTTCCTCACAGTCGCCGGAAAAGTGCTTCCGGCTGCTGCTTTCACGGCCGACGCCCGACCTTTGCTGTTGTGACTAGGTTCATCCCACTTTCTCCGACCCTCAGTCTCTCAATTTACCTCTTTCTCTCTTTAACCGTACGATTTCTCCTAAATTTGATGGTTGGACTTCTTTTTCTTCACAGCTAGAAGAAGGGAAAGATGCGGCATGCTAGCAAGGATCTTCTGCATTTGGAGCGGAAGGATTTATCCACTTCATCTTTAGGTGTTTTTAATGGTCGAATTTTCTTCGTTTTTAGCCTATATTGAATGTTTGGATTAGTACTTGTTTATTAGCTAATTTTTTGCGTTATATCAGAATCTTCACTGCTAGTTTGTAAAAAAAACTCAACATCCAAGGAGCCTTGTCGGAATGAAAGACCCATTACAGAACCCGCTTCAAAAAGCTTAGGTACCTACTTCCCTTTTGACTTTGATTTTTTTTTTAAAAAAATAGTTTTTATTTCTTGCTGCTTGTTATAGTTTGAAATCTGGACTCGTGCTTAGAATTTTTATTGCATTCATATTTAGAAGGCTAATTCAAACATGGGCACACTCGTTGAGTCATAATTTTGTGTTTAATGTTGCCTAGATTGTAAAGTTTAGGATTATGTTAGCTTAGTCAAATAGTACAGTTATTTGACCAATGATTTTCTTCCCCAAGTAGGTAATACTTAGTTGTTGTATTGTCAGCTGTTGTACATCTCATTCAATTGTTCAATCATTGTTTACCTTGTGGTAAACGCTTCAGACATAAGATCTGTGCTTGCTTGTTGCAATAACTATGCATAGACATGGATGCCTGATGGCTGGTTAGGAAATACTCACTGGCTATTTTCCTTTTCTTGGTTTTCTCAATGTCTGGAAATATATGGGTTTTTTTAGTTTCAATTTTTATAGCTTTTGCAAGTTGTGTTCTGTTTTCTCTTATGCAAGTGATGATGTGAATTTCCAGTTGTTGGTTTAAAACTTTGAGTATTATGCAGTTTGAAGTGATATATAGTGGTTGGAAAAATACTGACTATATAACATGTAGTGTTGTTAGGTTACCAACTATTGCTAACTTTGTAGCACTACTATGAGATGTATTGTAGAGGTTGTTTGTAGCAACTGTTTCCAACTAGACAACATCTTGCACTTTAGCTGGAAACTTATCTCCCCTGTTTATGTCGGTACTGCCTTTGGAACATAGAACATTCAGCATCAAATTTGAATATATTATGGTGCTTATGGTGCTTGTGGTGCTTGTTCCCTCTTGGGAGTTGTAAACATTGCTCACTTCCTTTTCACTTATTATAGTATTGGGAAGAGTCCAAGACTTTTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATTCAAAGGTTTGCATATTGACCAACTACTACTTAAATTTGAATCTAAACACAAAAAACATTCATTGTTCCTGATAGATACATTCATTGTTAATTGTCGTAGGAAAATGCTGATAAATATGATATCGAAGCCCTCGATGGCAATGAATCAGAAGTGATTCAATTGGTAAGTCACTTCCTTGTAATATTGTGTCCTAGATGTGATAGCTTGGTTTTTCACAATTTCTAATGTCATAATTTGATCTAAATAGGACCTGATGTTGGGTATTGCTGATCTTCACACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGCAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAGTGATCACGATAACAATGACAATGAAAAGAGCGATGATCAGAATACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCGAATTCTAGAAAAGCAAGCTGTAGAAGTAAAAGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAAGATGATCCATCTTCTGATCAGACCTGTTTGCGTCAATATGGATGCATTGTGGTTTGAAAGTTTCTGTTCATGCTCGATGTCGTTG

mRNA sequence

AGTTTCCGCAGACCCATTACTTTTCTTAAACCCTACTTCACGCGTTCAGCCATTGCGTATCCAACCTGACGCCGTCCCAGTGGGTGCCGGAAGCCTTCCGACGTCTATTCAACTCTCCCTTCCTTCCTCACAGTCGCCGGAAAAGTGCTTCCGGCTGCTGCTTTCACGGCCGACGCCCGACCTTTGCTGTTGTGACTAGCTAGAAGAAGGGAAAGATGCGGCATGCTAGCAAGGATCTTCTGCATTTGGAGCGGAAGGATTTATCCACTTCATCTTTAGAATCTTCACTGCTAGTTTGTAAAAAAAACTCAACATCCAAGGAGCCTTGTCGGAATGAAAGACCCATTACAGAACCCGCTTCAAAAAGCTTAGTATTGGGAAGAGTCCAAGACTTTTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATTCAAAGGAAAATGCTGATAAATATGATATCGAAGCCCTCGATGGCAATGAATCAGAAGTGATTCAATTGGACCTGATGTTGGGTATTGCTGATCTTCACACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGCAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAGTGATCACGATAACAATGACAATGAAAAGAGCGATGATCAGAATACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCGAATTCTAGAAAAGCAAGCTGTAGAAGTAAAAGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAAGATGATCCATCTTCTGATCAGACCTGTTTGCGTCAATATGGATGCATTGTGGTTTGAAAGTTTCTGTTCATGCTCGATGTCGTTG

Coding sequence (CDS)

ATGCGGCATGCTAGCAAGGATCTTCTGCATTTGGAGCGGAAGGATTTATCCACTTCATCTTTAGAATCTTCACTGCTAGTTTGTAAAAAAAACTCAACATCCAAGGAGCCTTGTCGGAATGAAAGACCCATTACAGAACCCGCTTCAAAAAGCTTAGTATTGGGAAGAGTCCAAGACTTTTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATTCAAAGGAAAATGCTGATAAATATGATATCGAAGCCCTCGATGGCAATGAATCAGAAGTGATTCAATTGGACCTGATGTTGGGTATTGCTGATCTTCACACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGCAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAGTGATCACGATAACAATGACAATGAAAAGAGCGATGATCAGAATACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCGAATTCTAGAAAAGCAAGCTGTAGAAGTAAAAGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAA

Protein sequence

MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQVLS

Homology

[Close]

BLAST of Pay0011399 vs. ExPASy TrEMBL
Match: A0A5D3CJH5 (E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00670 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.1e-97
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNE+PITEPASKSLVLGRVQDF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Pay0011399 vs. ExPASy TrEMBL
Match: A0A1S3BJW4 (uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.1e-97
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNE+PITEPASKSLVLGRVQDF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Pay0011399 vs. ExPASy TrEMBL
Match: A0A0A0L448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.4e-91
Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSK+P RNE+PITEPASKSLVLGRV+DF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK 
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Pay0011399 vs. ExPASy TrEMBL
Match: A0A6J1KZJ8 (uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498503 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.9e-77
Identity = 170/206 (82.52%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRHASKDLL LERKDL +SSLESSLLVCKKNSTSKEPCRNE+PITEPA KS VLGRV+DF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+D+K++A+KYDIEAL+GNESEVI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTC----SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSN 180
           GN PVIPL C    SSSESESEESSDDSITSD+++NDNEKSD QNTD  NRLSVKLKRS 
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKASCRSKSKGKGKSKKRPKIQVLS 203
           SR+A+CRS+S+ KGKS KRPKI  LS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]

BLAST of Pay0011399 vs. ExPASy TrEMBL
Match: A0A6J1F913 (uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443185 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.7e-74
Identity = 166/205 (80.98%), Postives = 185/205 (90.24%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRHASKDLL LERKDL +SS ESSLLVCKKNSTSKEPCRNE+PITEPA KS VLGRV+DF
Sbjct: 1   MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+D+K++A+KYDIEAL+G+ESEVI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSS---ESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNS 180
           GN PVI L CSSS   ESESEESSDDSITSD++++DNEKSD+QNTD  NRLSVKLKR  S
Sbjct: 121 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 180

Query: 181 RKASCRSKSKGKGKSKKRPKIQVLS 203
           RK +CRS+SK KGKS KRPKI  LS
Sbjct: 181 RKTNCRSESKEKGKSNKRPKILELS 205

[Close]

BLAST of Pay0011399 vs. NCBI nr
Match: XP_008448773.1 (PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa] >TYK12053.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa])

HSP 1 Score: 364.4 bits (934), Expect = 6.4e-97
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNE+PITEPASKSLVLGRVQDF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Pay0011399 vs. NCBI nr
Match: XP_004147238.2 (uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSK+P RNE+PITEPASKSLVLGRV+DF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK 
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Pay0011399 vs. NCBI nr
Match: XP_011650372.1 (uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus] >KGN55834.2 hypothetical protein Csa_010190 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 8.4e-89
Identity = 190/206 (92.23%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSL----ESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGR 60
           MRH SKDLL+LERKDLS+SSL    ESSLLVCKKNSTSK+P RNE+PITEPASKSLVLGR
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLGVFNESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGR 60

Query: 61  VQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAE 120
           V+DFLGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLMLGIADLHTPEAV AAE
Sbjct: 61  VKDFLGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAE 120

Query: 121 SAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSN 180
           SAIIGNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSN
Sbjct: 121 SAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN 180

Query: 181 SRKASCRSKSKGKGKSKKRPKIQVLS 203
           SRK SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SRKTSCRSKSKGKGKSKKRPKIQVLS 206

[Close]

BLAST of Pay0011399 vs. NCBI nr
Match: XP_038903017.1 (uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 uncharacterized protein LOC120089721 [Benincasa hispida])

HSP 1 Score: 307.4 bits (786), Expect = 9.3e-80
Identity = 179/203 (88.18%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNE+PITEPASKSLVLGRV+DF
Sbjct: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMD+K+NA+KYDIEALDGNES+VI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTC-SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRK 180
           GN PVIPLTC SSSESESEESSDDSITS+ +N+DNEKSDDQNTD SNR SVKLKRSNSRK
Sbjct: 121 GNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRK 180

Query: 181 ASCRSKSKGKGKSKKRPKIQVLS 203
            SCRSKSKGK KS+KRPKI  LS
Sbjct: 181 TSCRSKSKGKSKSEKRPKILELS 202

[Close]

BLAST of Pay0011399 vs. NCBI nr
Match: XP_023005549.1 (uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76
Identity = 170/206 (82.52%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDF 60
           MRHASKDLL LERKDL +SSLESSLLVCKKNSTSKEPCRNE+PITEPA KS VLGRV+DF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+D+K++A+KYDIEAL+GNESEVI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTC----SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSN 180
           GN PVIPL C    SSSESESEESSDDSITSD+++NDNEKSD QNTD  NRLSVKLKRS 
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKASCRSKSKGKGKSKKRPKIQVLS 203
           SR+A+CRS+S+ KGKS KRPKI  LS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]

BLAST of Pay0011399 vs. TAIR 10
Match: AT1G71430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 9.4e-22
Identity = 74/168 (44.05%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 6   KDLLHLERKDLSTSS-LESSLLVC---KKNSTSKEPCRNERPITEPASKSLVLGRVQDFL 65
           KDLL LE K+ S+SS ++S+LL+C    K     E     +P   P  KS +LG+++ FL
Sbjct: 8   KDLLKLELKNPSSSSAMDSALLMCTDKNKKKKKMEAPPPSKPTIAPVPKSQLLGKLKGFL 67

Query: 66  GVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAIIG 125
           GV++EANKK    S+ N + Y+IEAL GNESE+I++DLMLG+ADL+TPEAV+AAE+AI G
Sbjct: 68  GVMAEANKK----SEANPEAYNIEALTGNESELIEMDLMLGVADLNTPEAVSAAEAAIAG 127

Query: 126 NHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLS 170
             P          +ES +SS D    D  ++++E  + ++ +CS + S
Sbjct: 128 IGPA---------AESGDSSSD----DESDSESEGEESKSAECSRKRS 158

The following BLAST results are available for this feature:

BLAST of Pay0011399 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0011399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJH5	3.1e-97	99.50	E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BJW4	3.1e-97	99.50	uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=...	[more]
A0A0A0L448	7.4e-91	94.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1	[more]
A0A6J1KZJ8	7.9e-77	82.52	uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F913	3.7e-74	80.98	uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Pay0011399 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448773.1	6.4e-97	99.50	PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ...	[more]
XP_004147238.2	1.5e-90	94.06	uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus]	[more]
XP_011650372.1	8.4e-89	92.23	uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus] >KGN55834.2 hy...	[more]
XP_038903017.1	9.3e-80	88.18	uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 unchara...	[more]
XP_023005549.1	1.6e-76	82.52	uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima]	[more]

BLAST of Pay0011399 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71430.1	9.4e-22	44.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027921	NOP protein chaperone 1	PFAM	PF15370	DUF4598	coord: 54..176 e-value: 1.3E-14 score: 54.6
IPR027921	NOP protein chaperone 1	PANTHER	PTHR28674	SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED	coord: 2..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011399.1	Pay0011399.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000492	box C/D snoRNP assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0062064	box C/D snoRNP complex binding