Pay0000460 (gene) Melon (Payzawat) v1

Overview
NamePay0000460
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionZinc finger BED domain-containing protein DAYSLEEPER
Locationchr01: 35327844 .. 35332147 (+)
RNA-Seq ExpressionPay0000460
SyntenyPay0000460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCAGTCGCTTTCACTTCTTGAGGTACTATTCTAACTTTTCTCCCAATTTTTCGCTTTCTTTTTTGGTTCCATCGCCAGAAGTTCACTACTGATCTCCTCTTTCCTCACCGACGACTCTCAGGTTTGTATTTCCTTGCCGATGATCCAAATTCATCTTTGATCTCAATTGATTGCACATTTCTTTTCTTCTTATCCAACTGACGATTCGCTAATTGACTAAATTTGTGGATTATTGCCTTGTTCGATTACTTTTTGGAGATATCTTGACGTAGAGGAGATTGTGGCCGCGACTACTATTCCGATAACTTATTGGTTGAGGTATATACTTTCTGCATGACTAATGTTGATTCTTCTTCTTCTTTTCTTTTCCTTCTTCTTTTTATTTTATTTTACTATGTGTTATGAAACAGATCAATTTTCTAACTTTCTTTTTTATGTAACTTCCTCGGTCTCCCCCTCTTCTTCTTCCCTACTTCCGCTGCAGAACCCGTCATACCACCCGCTTCCGGTGATAGAGATGCCATCTCTTGTCTTGGATTATTTGATCCAGCCACCGCCTCAATCCCATTTCTGGTATCCCCTTGTCCTCCTGTTATGAATATTTGTGTACTTGTCTGTAATTAAAACAAAACCCAATTTGTTTTTCCAATCTCAATTCACCAAAGAATAAGAGGGGAGAAAATTTTGACAAATAAATAAATAAGCAATTTAAAAAGAGAAGAAATTAAAAGGTTCCATTCCATCGATGGGGGATTTAGATTTGACCTCCAAAGTGAAAATACAAATATCGAAACTGTTCTACTAAGCTCTGGTTTGTGGTTTGATGGCAGAGATATCAGAATTTAAGACCAAAAAACAGATTTTTTTTTTTCTTTTTCTTGTTTATTTTCTACAATTTTGTATATAACTTTCTTTTTCTTTACTTATTCTTGGAAAATCTTTTTTGCTAAGCTAATTCTGACTCTCCAAATTCCAATTTAAGATATATAAAATAATTTTTTTTTTCAGTTTTTAATTAGACTGTTAATAATGGTTCAACTATGCTTACATAGGGCATTAAAGAGCATTTTCAGTTGTATGCCTACATATGTTATTTTAAGTTTCATCAGTTGTATCTTTATTACTTCAAAATGGTCAATTGATCACTCTTTCATAAATTCAGTTCTTAAAGTGGCATCATTGGTTTGTATCTTGTATAACTTTGTTTATTATTCATTTGATGGTAGATGATAGGAGGGATGATCCTTTGGGTCTCCTATCAAATTAATGGACCTACGAGAGGGTTGGTTTATGAAGTTACTGTTGATTATTCGTAACTATGTTTCCTACGCAATGGTTCATCATGAAGTGCTAAGAATTCAAGAAAACAAAGTGGAGTCGTTGACTTGGGAGGATTGGGAAGTTTTTAAAGGATTACCAGGTATAAAGTTTTTGTTCAATAATTAAAACTTTTTTTCACAATTATCTATCAAAATTATAGAGCAACCTGCTTAATTAAGAAATAGGAAATGACTTTGTTGATGAGTATTACTGATATACTTCCTGTATATGAACCTTTGCTTGTGTGCTTTCTGAATAGTTGCAATCAAGTACAATTAAATTTGTTGTTATTGGCTTCTGTTGATGAAACAATATGAATAGAACCCTCATCCTCTCGAAGTGTTTTCCTCTTTTCTCCTACCCTCAAACCTTAACCTTCATCTGATTGGTTTCTTATGCGATTTTTGTTTAGAATTAAGCATCATCATCTGGTTTCATCTTTCTCAAATTTTGTTTTCTTTGGGTAAAAGATCAACTTTCATTGAAAAAAAAAGGAATTTTTCCATGTCTTGGCAAAAAAGACTACAATGGGTTTAGCTTTCCCCTTGGTCTTACAGCTTCTTTAGGACAGCTAATCTCACGGAATATTATGCCCAACTTTATAACGTTTGAATGTTTACAAAACTCGTAGAATCAATTCTTTGTCTGTAGAAATATGAAAATGGAATGTATGTCCTCCAATTGTCTGATCTTTCTGATGGCATTACTAGATGATTTGTGTTATGGGTTTTATTCAATACATGGGAAAAAACTCAGAGATCTGGCCCCTTTATTAGGATGGGGGAAAACTCACTTTCTTGGGGTTAAAATAAGCAGAAAGGAGGTTAAGGGGAAACTCAATAATTTGCTGGCAAGAGGGTGTTTGATAGAATGCTGCAATGATATATGAATATGTAATGTCTTCAAAACTCATTTGTTTACTTCAAGGATCTCTGTTTCTTTTAACAATTTTAGTGAAGAATCTAATAATGGAGGTAACTTATTGGTTGGGGTATGTATTTGATGTCTCTAGTAAGATCAAACTCAAACCATATGCAAGCTATTTTTCAATGCTAGATGATGAGCCTTTTGTTGTTGTTTGATGTGTTACAGTTTCAACTTGAAGTGGCTAGTAATGAATGAAAGTTTCATCGATACTTTTTGTGCAAAGAAAGTTGATTTGACTCTCAAGGTTAACGATCTCTTATTTATTTTCTATCTATTGCTGTTTTGGTTTAATGCTAATCATACAATTGTTGGTTCAATATAGTGGGCCATCAAAACATGTTCTTGCTTATGCTGACTAGTTAAGAGAAGATCCCTGATTTTTGGATATCCTAGTTCAAGTTTCTCCAACAATAGATGGCCATGCATTTTGAAAATTGATGTTGGGTTATAAGCCCTCACTTGTACAAGTAAGCAAAATAACTTTCTTCATGGTTGAGCCATTTGGAAATTATCAAGATCAAAGCTTCTTGTTGGTGCTCATTTCAAAATCATTTTTACGACCCTTTTTAAGTTATTTGTAGCAATTTGAGGTCTTTATTGTAGCTTCTTGGACTATTTTCCCATATTTCTGTTCTTTTCTTCTGCTTTGTTCCTTTGTTAGGTTCTGTTTTCATTGTTTCTTTTTTCTTTTTATCTCTTCTTTCTTCAGATAAAACATGAAAAGTTGATACAGTACGCACTTGCCTTCGTAGTTTTTGCTTGATAATTGAGAAACAACTTCAATTGCTGTAGAAGTTAGGTTATAAGATTCATTTCTCTTCTACTTTCATTGGAGAAGCCTTTTGTTTCTTTTTCTATCTTCTAGCTCTACCCATACTTTAGTACTCCAAGTAGTAATTTTTAATTTATGCTCCAGGTTGAACTCAACCAAGTGATGAGTATATTTATAATTTATTTTGTAGGTTGAACTCAACCAAACGTGCCATTTGTAGTTTCCAAGGTTGCGAGTCGTTTTTTTAAGTAAGATTAATTGTTATGTAAGTGACGTCTGTGAGTTTGCCAATTTTATTTTGAATTCTTGAATTGTTTACTTATTTTTTAGGAGAATTCTTGAATTGGTTCTCTAGTAGTTTCTCAGGATAGAAATGGTTTATTTGAGAATTCAAATCATACACTTTAGGTCGGGTATCGACTTTTCAAATAGATTTAGGTTCTTGGGAAATAACTAATGAAAGATTAACATGACTATAACAGCTTCTCTTTTGTAATAGGACTGAAAATTTGGTTTCGAGCTAGTTCTTCCTGCTCCACTGTTGCCAAATGTGGGGATGATGAAGAGAATCAAGTGGTTCCAATGTCGCCACCACCTCCAGTTTCGAGCTAGTTCTTCCTGCTCTCCATTGTTTCTTCTTCTTTGAATGATTTTAACTAGATCTTAAGAAATCTGAGGTAATGAGTAAATGTTTTCGCATTAATTATTATATTTAACTTGTCTTTAAATCTTATGAATGATAGTATACCTTTCTATGTTAATTTGTTTATGGTGTATGGGGTTATAGAGATTATGATGATGAAGGAAAAATTTTCAAAATGGTTGCTTGTTGAAGATATGTCAAGCCATGGAAATAGTATTAACTTTTTAACTTTAAGATAGTCATAATTATTCTTGCAATAAGGAGTGATGTTAAATAAAATATGAGTTGCTAAATTTCAACACCTATTATAGAAAAGAATAATTTATTGCCAAGCTTAGAAGTTACTATTGTTGAAGTGTGTATGTGTTGTGTTGTTGAAATGAATGTGTATTGTGTTGTTGAAGTGAATGTGCTGTATTATTGAATTAATTTTGTTTTCTTTTATTTTCTTACTAGGTTTTGCCCGATTCCATTGGAGCAGCGAAACCATATTTGTGGCAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAAAATTTCCGGTTTAAATGTACTTATTTAAATAGCTAGCTTGTTCGTAACAAACCATATATGTATCAACACTTAAAGCGATATTATAAAGTGTATGTTTCTTT

mRNA sequence

CGCAGTCGCTTTCACTTCTTGAGGTACTATTCTAACTTTTCTCCCAATTTTTCGCTTTCTTTTTTGGTTCCATCGCCAGAAGTTCACTACTGATCTCCTCTTTCCTCACCGACGACTCTCAGATATCTTGACGTAGAGGAGATTGTGGCCGCGACTACTATTCCGATAACTTATTGGTTGAGAACCCGTCATACCACCCGCTTCCGGTGATAGAGATGCCATCTCTTGTCTTGGATTATTTGATCCAGCCACCGCCTCAATCCCATTTCTGATGATAGGAGGGATGATCCTTTGGGTCTCCTATCAAATTAATGGACCTACGAGAGGGTTGGTTTATGAAGTTACTGTTGATTATTCGTAACTATGTTTCCTACGCAATGGTTCATCATGAAGTGCTAAGAATTCAAGAAAACAAAGTGGAGTCGTTGACTTGGGAGGATTGGGAAGTTTTTAAAGGATTACCAGGACTGAAAATTTGGTTTCGAGCTAGTTCTTCCTGCTCCACTGTTGCCAAATGTGGGGATGATGAAGAGAATCAAGTGGTTCCAATGTCGCCACCACCTCCAGTTTCGAGCTAGTTCTTCCTGCTCTCCATTGTTTCTTCTTCTTTGAATGATTTTAACTAGATCTTAAGAAATCTGAGGTTTTGCCCGATTCCATTGGAGCAGCGAAACCATATTTGTGGCAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAAAATTTCCGGTTTAAATGTACTTATTTAAATAGCTAGCTTGTTCGTAACAAACCATATATGTATCAACACTTAAAGCGATATTATAAAGTGTATGTTTCTTT

Coding sequence (CDS)

ATGGACCTACGAGAGGGTTGGTTTATGAAGTTACTGTTGATTATTCGTAACTATGTTTCCTACGCAATGGTTCATCATGAAGTGCTAAGAATTCAAGAAAACAAAGTGGAGTCGTTGACTTGGGAGGATTGGGAAGTTTTTAAAGGATTACCAGGACTGAAAATTTGGTTTCGAGCTAGTTCTTCCTGCTCCACTGTTGCCAAATGTGGGGATGATGAAGAGAATCAAGTGGTTCCAATGTCGCCACCACCTCCAGTTTCGAGCTAG

Protein sequence

MDLREGWFMKLLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPGLKIWFRASSSCSTVAKCGDDEENQVVPMSPPPPVSS
Homology
[Close]
BLAST of Pay0000460 vs. ExPASy TrEMBL
Match: A0A5A7SVI9 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00440 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.5e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 11  LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPGLKIWFRASSSCSTVAKCG 70
           LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPGLKIWFRASSSCSTVAKCG
Sbjct: 53  LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPGLKIWFRASSSCSTVAKCG 112

Query: 71  DDEENQVVPMSPPPPVSS 89
           DDEENQVVPMSPPPPVSS
Sbjct: 113 DDEENQVVPMSPPPPVSS 130

[Close]
BLAST of Pay0000460 vs. NCBI nr
Match: KAA0035010.1 (zinc finger BED domain-containing protein DAYSLEEPER [Cucumis melo var. makuwa] >TYK02350.1 zinc finger BED domain-containing protein DAYSLEEPER [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 7.2e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 11  LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPGLKIWFRASSSCSTVAKCG 70
           LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPGLKIWFRASSSCSTVAKCG
Sbjct: 53  LLLIIRNYVSYAMVHHEVLRIQENKVESLTWEDWEVFKGLPGLKIWFRASSSCSTVAKCG 112

Query: 71  DDEENQVVPMSPPPPVSS 89
           DDEENQVVPMSPPPPVSS
Sbjct: 113 DDEENQVVPMSPPPPVSS 130

The following BLAST results are available for this feature:
BLAST of Pay0000460 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0000460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SVI93.5e-37100.00Zinc finger BED domain-containing protein DAYSLEEPER OS=Cucumis melo var. makuwa... [more]
BLAST of Pay0000460 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035010.17.2e-37100.00zinc finger BED domain-containing protein DAYSLEEPER [Cucumis melo var. makuwa] ... [more]
BLAST of Pay0000460 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0000460.1Pay0000460.1mRNA