PI0020799.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0020799.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CASP-like protein
Location	chr01: 2724048 .. 2725812 (-)
Sequence length	862
RNA-Seq Expression	PI0020799.1
Synteny	PI0020799.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCAACCCTTTCTCATTTCCATTGTTCTTCCCCAAATGGACGGTGTTGATGACAGTTGAGAATCCTCAACGACTCAAATTCATCCCCCATTTTTAAAATCACTTCCCAAAACAGAGGATTTGCTGGGAGAGTTAGCAAAACAGAGTCGGCTCCCCAATGGGCAAAACCAAGAGAATTTGTTTGCTGCTTTTGAGGCTTCTTGCTTTGGGTTCGACTGTTTCTGCTGCCATTGTTATGGCTACAAGTCATGAAGAAGCTACGTTTTTTACTCTGTCTTTTGAGGCTAAATACACTCATACACCATCCTTCAAGTGAGATTATTATTCTATCTCTGTTTTTTGGATTATGGGTTTTTGTTGTTTAATTTTGGTCTGATTGGAGGTTATTTAATTTTCTTTTTCGAGGTATTTTGTGATTGCAAATTCAGTTGCGAGTGTTTATGGGTTTCTTGTGCTTTTTCTTCCTGCGGAGAGCTTGCTGTGGCGTTTGGTGCTCTGTTTCGATGTGGTAATTCTCAAGACAGGGGACCCTTCTCTTCTTCTAACGTCAATTTAATTTATGTTTATCTATCATTTAATTTGGTATTTAATACATATTTAAACCTTTCTTTAAGATTAATAGGTTATTAAATATTAAAGCTATTTTTCTTACAACATTAAACGTATCTAATTTATTGTTTAATTTTATTTTTATTGTTTTTAATAGATGAGAGATATATTTAAACGTTGCAAAACTAAATTCCTCTATTAAATCTAAAGTTAAATTTTGTATGGACCTATTTTTAAATATAGAGAATGAAACAAAATATTTAATCATAATGTGTCCATTAGTATCTATTTTAGTATATCACAAATATATTTGATATTTTGTTATATTTATAAATATTTTTAGATGCTTTGTTTAAAATAATTTTCACTTTATATTATTAATAATAATATGCTAAATTTTCAATTTTCTGATTTTTTTTTTTTAAATATTGAATAGACATTGAAGGTCCACAAATCAATCTCATTGGTTACAAATTTTGGAAATAAATAGATACAAAGAAGAAAGTTTAGAATTTAAAAAAAAAAAGAGTTAACGAATTTATAATAAGCTTAAAACTTAATTATTTTAAAAATGATATATTTGATGAATGATAAAAAAAAATTGTAAAAAATATAATTAGTTTTATGACAAATATGTGTGACATTGGACTTTGAAAGTTTTTTGATCATATGTATAATTTGGTATTTTGTTTTGCTAACTATAATTGGAACTTCTCCTTTCAAAGTTGATAATAAAAAATTTATCTAAATAACGTATTTTGTTGAGTAGATAATGACGATGTTGCTGACTTCAAGTATAGCAGCGGCTTTGGCGGTGGCGCAAATAGGAAAAAATGGAAACTCATATGCAGGATGGCTCCCAATATGCGACCAAGTGGCTAATTATTGTAGTCAAGTCACTGGAGCTTTGGCTATGGGTCTCCTTGGACTACTTGTTTACTTGTTGCTTCTTCTTTATTCTCTCCACTCTCTTTTGGATCCTCTTCTTTTGAAAAAGCCTTGAGGCAATGCAACATAAACTTAGGTCTTTGCTTTTAGGCCATCTTTTTGCGAAAAATGGCTTGCCATAAACTTGGAACTTTGGCCCTTTGCAAGTATTTCCAAGGGCGAAATAAAAATTCGAGCACTTGTGATCGACTGAATTTTGTTAATTGAGTTGTTGTTTCATTGTTATGAGTTTTGTATTGTTTCAATTAGTAGATGTTACATCATTTCA

mRNA sequence

CACCAACCCTTTCTCATTTCCATTGTTCTTCCCCAAATGGACGGTGTTGATGACAGTTGAGAATCCTCAACGACTCAAATTCATCCCCCATTTTTAAAATCACTTCCCAAAACAGAGGATTTGCTGGGAGAGTTAGCAAAACAGAGTCGGCTCCCCAATGGGCAAAACCAAGAGAATTTGTTTGCTGCTTTTGAGGCTTCTTGCTTTGGGTTCGACTGTTTCTGCTGCCATTGTTATGGCTACAAGTCATGAAGAAGCTACGTTTTTTACTCTGTCTTTTGAGGCTAAATACACTCATACACCATCCTTCAAGTATTTTGTGATTGCAAATTCAGTTGCGAGTGTTTATGGGTTTCTTGTGCTTTTTCTTCCTGCGGAGAGCTTGCTGTGGCGTTTGGTGCTCTGTTTCGATGTGATAATGACGATGTTGCTGACTTCAAGTATAGCAGCGGCTTTGGCGGTGGCGCAAATAGGAAAAAATGGAAACTCATATGCAGGATGGCTCCCAATATGCGACCAAGTGGCTAATTATTGTAGTCAAGTCACTGGAGCTTTGGCTATGGGTCTCCTTGGACTACTTGTTTACTTGTTGCTTCTTCTTTATTCTCTCCACTCTCTTTTGGATCCTCTTCTTTTGAAAAAGCCTTGAGGCAATGCAACATAAACTTAGGTCTTTGCTTTTAGGCCATCTTTTTGCGAAAAATGGCTTGCCATAAACTTGGAACTTTGGCCCTTTGCAAGTATTTCCAAGGGCGAAATAAAAATTCGAGCACTTGTGATCGACTGAATTTTGTTAATTGAGTTGTTGTTTCATTGTTATGAGTTTTGTATTGTTTCAATTAGTAGATGTTACATCATTTCA

Coding sequence (CDS)

ATGGGCAAAACCAAGAGAATTTGTTTGCTGCTTTTGAGGCTTCTTGCTTTGGGTTCGACTGTTTCTGCTGCCATTGTTATGGCTACAAGTCATGAAGAAGCTACGTTTTTTACTCTGTCTTTTGAGGCTAAATACACTCATACACCATCCTTCAAGTATTTTGTGATTGCAAATTCAGTTGCGAGTGTTTATGGGTTTCTTGTGCTTTTTCTTCCTGCGGAGAGCTTGCTGTGGCGTTTGGTGCTCTGTTTCGATGTGATAATGACGATGTTGCTGACTTCAAGTATAGCAGCGGCTTTGGCGGTGGCGCAAATAGGAAAAAATGGAAACTCATATGCAGGATGGCTCCCAATATGCGACCAAGTGGCTAATTATTGTAGTCAAGTCACTGGAGCTTTGGCTATGGGTCTCCTTGGACTACTTGTTTACTTGTTGCTTCTTCTTTATTCTCTCCACTCTCTTTTGGATCCTCTTCTTTTGAAAAAGCCTTGA

Protein sequence

MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSVASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP

Homology

[Close]

BLAST of PI0020799.1 vs. ExPASy Swiss-Prot
Match: B9RW00 (CASP-like protein 1C1 OS=Ricinus communis OX=3988 GN=RCOM_1174750 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 105/162 (64.81%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           M K KR+  LLLRL+A G+ + AAIVMATSHE  +FFT+S+EAKY+ TP+FKYFVI N++
Sbjct: 1   MAKAKRVFTLLLRLIAFGTALVAAIVMATSHESGSFFTVSYEAKYSDTPAFKYFVIVNAI 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VY FL LFLP+ESLLWRLV+  DV+ TML+TSSI+AA+AVAQ+GK GNS+AGWLPIC 
Sbjct: 61  VTVYSFLALFLPSESLLWRLVIVTDVVFTMLVTSSISAAVAVAQVGKKGNSHAGWLPICG 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
           QV  +C QVTGALA   + L+ Y +LLLYS+H++L+PLLL+K
Sbjct: 121 QVPKFCDQVTGALAAAFISLITYAILLLYSIHTVLNPLLLQK 162

[Close]

BLAST of PI0020799.1 vs. ExPASy Swiss-Prot
Match: B9N2D0 (CASP-like protein 1C2 OS=Populus trichocarpa OX=3694 GN=POPTR_0019s13170g PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-50
Identity = 105/161 (65.22%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           M K KR+  LLLRL+A+G+T++A I+MATSHE+ TFF +S+EAKYT TP+FKYFVIAN++
Sbjct: 1   MMKPKRLLSLLLRLIAVGATLAAVIIMATSHEKGTFFAVSYEAKYTDTPAFKYFVIANAI 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VYGFLVLF P  S LWRLVL  D++ TMLL SSI+AALAVAQ+GKNGNS AGWLP+C 
Sbjct: 61  VTVYGFLVLFHPPGSPLWRLVLALDLVFTMLLISSISAALAVAQVGKNGNSRAGWLPVCG 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLK 162
           QV  YC+QVTGAL  GL+ L+ Y++LLL+S+++ L+PLL K
Sbjct: 121 QVTKYCNQVTGALVAGLIALITYIILLLHSIYTFLNPLLEK 161

[Close]

BLAST of PI0020799.1 vs. ExPASy Swiss-Prot
Match: B9N5U6 (CASP-like protein 1C3 OS=Populus trichocarpa OX=3694 GN=POPTR_0013s13520g PE=3 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-49
Identity = 102/163 (62.58%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           M K KR+  LLLRL+A G+T++A I+MATSHE+ +FF LS+EAKY+ TP+FKYFVIAN++
Sbjct: 1   MVKPKRLLSLLLRLIAFGATLAAVIIMATSHEKGSFFALSYEAKYSDTPAFKYFVIANAI 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VYGFL LF+P+ES LWRLVL  D++ TMLL SSI+AALAVAQ+GK GNS AGWLP+C 
Sbjct: 61  VTVYGFLALFIPSESPLWRLVLALDLVFTMLLISSISAALAVAQVGKKGNSSAGWLPVCG 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164
           QV  YC+QVTGAL  G + ++ Y++LLLYS+++ L+ LL K P
Sbjct: 121 QVTKYCNQVTGALVAGFIAIITYIILLLYSIYTFLNSLLGKTP 163

[Close]

BLAST of PI0020799.1 vs. ExPASy Swiss-Prot
Match: A7PJ32 (CASP-like protein 1C2 OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03760 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-48
Identity = 97/150 (64.67%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 4   TKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSVASV 63
           T RIC L+LRLLA G+T+SAAIVMATSHE  T+ +LS EAKY+HTP+FKYFVIAN++ S 
Sbjct: 5   TDRICFLVLRLLAFGATLSAAIVMATSHERTTYLSLSIEAKYSHTPAFKYFVIANAIGSA 64

Query: 64  YGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVA 123
           Y  L+LFLP+   LW LV+  DV++TM LTSSI+AAL++A +GK GNSYAGWLPICDQV 
Sbjct: 65  YSLLLLFLPSHGSLWPLVIASDVVITMFLTSSISAALSIAYVGKKGNSYAGWLPICDQVP 124

Query: 124 NYCSQVTGALAMGLLGLLVYLLLLLYSLHS 154
           NYC+ VTGALA G +G+++Y++LL YS+++
Sbjct: 125 NYCNHVTGALAAGFIGVVLYMVLLQYSIYT 154

[Close]

BLAST of PI0020799.1 vs. ExPASy Swiss-Prot
Match: D7M2M8 (CASP-like protein 1C1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_327471 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.0e-47
Identity = 103/159 (64.78%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 4   TKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSVASV 63
           TKRI  L+LRL A G+ ++A IVM TS E A+FF +S EAKYT   +FKYFVIAN+V SV
Sbjct: 5   TKRIGGLVLRLAAFGAALAALIVMITSRERASFFAVSLEAKYTDMAAFKYFVIANAVVSV 64

Query: 64  YGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVA 123
           Y FLVLFLP ESLLW+ V+  D++MTMLLTSS++AALAVAQ+GK GN+ AGWLPIC QV 
Sbjct: 65  YSFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVP 124

Query: 124 NYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
            +C Q+TGAL  G + L++Y+LLLLYSLHS++DP LL+K
Sbjct: 125 KFCDQITGALIAGFVALVLYVLLLLYSLHSVVDPFLLQK 163

[Close]

BLAST of PI0020799.1 vs. ExPASy TrEMBL
Match: A0A1S3C0T2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103495515 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.4e-76
Identity = 159/163 (97.55%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEA FFTLSFEAKYTHTPSFKYFVIANSV
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSS+AAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSVAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164
           QVANYCSQVTGAL MGLLGLLVYLL+LLYSLHSLLDPLLLKKP
Sbjct: 121 QVANYCSQVTGALVMGLLGLLVYLLILLYSLHSLLDPLLLKKP 163

[Close]

BLAST of PI0020799.1 vs. ExPASy TrEMBL
Match: A0A0A0K3S1 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047980 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.2e-76
Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEA FFTLSFEAKYTHTPSFKYFVIANSV
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGK+GNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKDGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164
           QVANYCSQVTGAL MGLLGLLVYLLLLLYSLHSLLDPLLLKKP
Sbjct: 121 QVANYCSQVTGALVMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 163

[Close]

BLAST of PI0020799.1 vs. ExPASy TrEMBL
Match: A0A6J1I0I5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111468331 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.9e-70
Identity = 147/162 (90.74%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEA FF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFDVI+TMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDVILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
           QVA+YC QV+GALA+GLLGLLVY LLLLYSLHSLLDPLLLKK
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKK 162

[Close]

BLAST of PI0020799.1 vs. ExPASy TrEMBL
Match: A0A6J1D3M2 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016698 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.9e-69
Identity = 146/163 (89.57%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           M   KRICLLLLRLLALGSTVSAAIVMATS EEATFF LSFEAKYTHTPSFKYFV+AN+V
Sbjct: 37  MATAKRICLLLLRLLALGSTVSAAIVMATSREEATFFALSFEAKYTHTPSFKYFVVANAV 96

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFLVLFLP ESLLWRLVLCFDV++TMLLTSSIAAA+AVAQIGKNGNSYAGWLPICD
Sbjct: 97  ASVYGFLVLFLPEESLLWRLVLCFDVVLTMLLTSSIAAAMAVAQIGKNGNSYAGWLPICD 156

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164
           QVA YCSQVTGALA   LGLL+YLLLLLYSLHS+LDPLLLKKP
Sbjct: 157 QVAKYCSQVTGALAAAFLGLLLYLLLLLYSLHSVLDPLLLKKP 199

[Close]

BLAST of PI0020799.1 vs. ExPASy TrEMBL
Match: A0A6J1GL75 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455394 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.2e-68
Identity = 144/162 (88.89%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGK KRICLLLLRLLALGST+SAA+VMA S EEA FF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAVVMAASREEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
           QVA+YC QV+GALA+GLLGLLVY LLLLYSLHSLLDPLLLKK
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKK 162

[Close]

BLAST of PI0020799.1 vs. NCBI nr
Match: XP_008455324.1 (PREDICTED: CASP-like protein 1C1 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 159/163 (97.55%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEA FFTLSFEAKYTHTPSFKYFVIANSV
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSS+AAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSVAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164
           QVANYCSQVTGAL MGLLGLLVYLL+LLYSLHSLLDPLLLKKP
Sbjct: 121 QVANYCSQVTGALVMGLLGLLVYLLILLYSLHSLLDPLLLKKP 163

[Close]

BLAST of PI0020799.1 vs. NCBI nr
Match: XP_004137023.1 (CASP-like protein 1C1 [Cucumis sativus] >KAE8645772.1 hypothetical protein Csa_020368 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEA FFTLSFEAKYTHTPSFKYFVIANSV
Sbjct: 2   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 61

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGK+GNSYAGWLPICD
Sbjct: 62  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKDGNSYAGWLPICD 121

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164
           QVANYCSQVTGAL MGLLGLLVYLLLLLYSLHSLLDPLLLKKP
Sbjct: 122 QVANYCSQVTGALVMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164

[Close]

BLAST of PI0020799.1 vs. NCBI nr
Match: XP_038888604.1 (CASP-like protein 1C1 [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 9.5e-75
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEA FF LSFEAKYTHTPSFKYFVIAN+V
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFALSFEAKYTHTPSFKYFVIANAV 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFLVLFLPAESLLWRLVLCFDV+MTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVMMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKKP 164
           QVANYCSQVTGALAMGLLGL VYLLLLLYSLHSLLDPLLLKKP
Sbjct: 121 QVANYCSQVTGALAMGLLGLFVYLLLLLYSLHSLLDPLLLKKP 163

[Close]

BLAST of PI0020799.1 vs. NCBI nr
Match: KAG6572362.1 (CASP-like protein 1C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011973.1 CASP-like protein 1C1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 147/162 (90.74%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEA FF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
           QVA+YC QV+GALA+GLLGLLVYLLLLLYSLHSLLDPLLLKK
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKK 162

[Close]

BLAST of PI0020799.1 vs. NCBI nr
Match: XP_022969278.1 (CASP-like protein 1C1 [Cucurbita maxima])

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 147/162 (90.74%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSV 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEA FF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFDVI+TMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDVILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
           QVA+YC QV+GALA+GLLGLLVY LLLLYSLHSLLDPLLLKK
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKK 162

[Close]

BLAST of PI0020799.1 vs. TAIR 10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-47
Identity = 101/159 (63.52%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 4   TKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSVASV 63
           TKRI  L+LRL A G+ ++A IVM TS E A+F  +S EAKYT   +FKYFVIAN+V SV
Sbjct: 5   TKRIGGLVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSV 64

Query: 64  YGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVA 123
           Y FLVLFLP ESLLW+ V+  D++MTMLLTSS++AALAVAQ+GK GN+ AGWLPIC QV 
Sbjct: 65  YSFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVP 124

Query: 124 NYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
            +C Q+TGAL  G + L++Y+LLLLYSLH+++DP LL+K
Sbjct: 125 KFCDQITGALIAGFVALVLYVLLLLYSLHAVVDPFLLQK 163

[Close]

BLAST of PI0020799.1 vs. TAIR 10
Match: AT1G03700.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-41
Identity = 87/159 (54.72%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 4   TKRICLLLLRLLALGSTVSAAIVMATSHEEATFFTLSFEAKYTHTPSFKYFVIANSVASV 63
           T+R+  L+LR  A  + + A I M TS E ++FF +S  AKY+   +FKYFVIAN++ +V
Sbjct: 5   TQRLGGLVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTV 64

Query: 64  YGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVA 123
           Y FLVLFLP ESLLW+ V+  D+++TMLLTSS++AA+AVAQ+GK GN+ AGWLPIC QV 
Sbjct: 65  YSFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVP 124

Query: 124 NYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDPLLLKK 163
            +C Q+TGAL  GL+ L++Y+ LL++S+H ++DP LL+K
Sbjct: 125 RFCDQITGALIAGLVALVLYVFLLIFSIHHVVDPFLLRK 163

[Close]

BLAST of PI0020799.1 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17
Identity = 64/172 (37.21%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 2   GKTKRICLLLLRLLALGSTVSAAIVMATSHEEATFFT---------LSFEAKYTHTPSFK 61
           GK+ +I LL LRLLA  +T+SAAIVM  + E  TF            +F AK+ HTP+F 
Sbjct: 13  GKSCKI-LLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFV 72

Query: 62  YFVIANSVASVYGFLVLFL-----PAESLLWRL--VLCFDVIMTMLLTSSIAAALAVAQI 121
           +FV+AN++ S +  L++ L       E   +RL  V   D++   L++++  AA  +A++
Sbjct: 73  FFVVANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEV 132

Query: 122 GKNGNSYAGWLPICDQVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSLLDP 158
           GKNGN +A W  ICD+ A YC    GAL     G+++ L++   S+  L+ P
Sbjct: 133 GKNGNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLVQP 183

[Close]

BLAST of PI0020799.1 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 4   TKRICLL--LLRLLALGSTVSAAIVMATSHEEATFFT--LSFEAKYTHTPSFKYFVIANS 63
           ++RI +L  +LR++A  +T+ +AI+M T+HE   FFT  + F+A+Y   P+  +FV+AN+
Sbjct: 22  SRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANA 81

Query: 64  VASVYGFLVLFLPAESLLWR-------LVLCFDVIMTMLLTSSIAAALAVAQIGKNGNSY 123
           V S Y  L L L    ++ R       L++  DV M  LLTS  ++A A+  +  NGN+ 
Sbjct: 82  VVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNK 141

Query: 124 AGWLPICDQVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSL 155
             W  IC Q  ++C +++G+L    + +++ +LL+L S  +L
Sbjct: 142 TNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIAL 183

[Close]

BLAST of PI0020799.1 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15
Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 0


Query: 11  LLRLLALGSTVSAAIVMATSHEEATFFT--LSFEAKYTHTPSFKYFVIANSVASVYGFLV 70
           LLRL A+  T+ AA VM T+ E   FFT  L F+A Y   P+F+YFVIA  VA V  +LV
Sbjct: 51  LLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIA--VAVVASYLV 110

Query: 71  LFLP--------AESLLWRLVLCF-DVIMTMLLTSSIAAALAVAQIGKNGNSYAGWLPIC 130
           L LP          ++  RL+L   D ++  L TS+ AAA ++  +  NGN    WLPIC
Sbjct: 111 LSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPIC 170

Query: 131 DQVANYCSQVTGALAMGLLGLLVYLLLLLYSLHSL 155
            Q  ++C  V+ A+    + +L +++L++ S  +L
Sbjct: 171 QQFGDFCQNVSTAVVADSIAILFFIVLIIISAIAL 203

The following BLAST results are available for this feature:

BLAST of PI0020799.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9RW00	3.4e-51	64.81	CASP-like protein 1C1 OS=Ricinus communis OX=3988 GN=RCOM_1174750 PE=2 SV=1	[more]
B9N2D0	3.8e-50	65.22	CASP-like protein 1C2 OS=Populus trichocarpa OX=3694 GN=POPTR_0019s13170g PE=2 S...	[more]
B9N5U6	1.1e-49	62.58	CASP-like protein 1C3 OS=Populus trichocarpa OX=3694 GN=POPTR_0013s13520g PE=3 S...	[more]
A7PJ32	2.7e-48	64.67	CASP-like protein 1C2 OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03760 PE=2 SV=1	[more]
D7M2M8	3.0e-47	64.78	CASP-like protein 1C1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of PI0020799.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0T2	5.4e-76	97.55	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103495515 PE=3 SV=1	[more]
A0A0A0K3S1	9.2e-76	98.16	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047980 PE=3 SV=1	[more]
A0A6J1I0I5	9.9e-70	90.74	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111468331 PE=3 SV=1	[more]
A0A6J1D3M2	4.9e-69	89.57	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016698 PE=3 SV=1	[more]
A0A6J1GL75	3.2e-68	88.89	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455394 PE=3 SV=1	[more]

BLAST of PI0020799.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455324.1	1.1e-75	97.55	PREDICTED: CASP-like protein 1C1 [Cucumis melo]	[more]
XP_004137023.1	1.9e-75	98.16	CASP-like protein 1C1 [Cucumis sativus] >KAE8645772.1 hypothetical protein Csa_0...	[more]
XP_038888604.1	9.5e-75	96.93	CASP-like protein 1C1 [Benincasa hispida]	[more]
KAG6572362.1	2.0e-69	90.74	CASP-like protein 1C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG70119...	[more]
XP_022969278.1	2.0e-69	90.74	CASP-like protein 1C1 [Cucurbita maxima]	[more]

BLAST of PI0020799.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03540.1	1.8e-47	63.52	Uncharacterised protein family (UPF0497)	[more]
AT1G03700.1	2.5e-41	54.72	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	4.3e-17	37.21	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	2.8e-16	34.57	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	2.4e-15	38.71	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..141 e-value: 3.3E-37 score: 127.6
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 10..153 e-value: 5.4E-44 score: 147.7
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 3..162
None	No IPR available	PANTHER	PTHR11615:SF159	CASP-LIKE PROTEIN 1C1	coord: 3..162

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0020799	PI0020799	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020799.1-exon	PI0020799.1-exon-chr01:2724048..2724494	exon
PI0020799.1-exon	PI0020799.1-exon-chr01:2725305..2725407	exon
PI0020799.1-exon	PI0020799.1-exon-chr01:2725501..2725812	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020799.1-three_prime_utr	PI0020799.1-three_prime_utr-chr01:2724048..2724260	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020799.1-cds	PI0020799.1-cds-chr01:2724261..2724494	CDS
PI0020799.1-cds	PI0020799.1-cds-chr01:2725305..2725407	CDS
PI0020799.1-cds	PI0020799.1-cds-chr01:2725501..2725655	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020799.1-five_prime_utr	PI0020799.1-five_prime_utr-chr01:2725656..2725812	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0020799.1	PI0020799.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding