Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGCTCAACCATACCTCCTCATCCTTGTCCAATGAAGTCTCTAGGTGCATGAAATATGTGGTAAAAATTCGTGCTTTACAGCCTTCATCTTCGAGCCATCAGTTGTTCAAATAGGGACAAGAACAATGGTGGTTTTGTTGAATGGTTGTTTGGAGCTAAAAGAATTGAATTGCCTAGCAGCAACAAATGCAGGATTCTCGCTGCATTTGCTGTGTTTAAGTTGTAAATAGAATGGGGTTTCAAATGGAAAGGAAGTGTAATTGAAAGAATTCACAGCTATTGTTCTTGCAAACTTAAAGTATGATTTATACGAATGAATTGTTTCAATGCAACATTATATATATATATTGATGTCTCATTGATAGTTTATTCAAGCTGATTTCTCTTGGAGCAAACTCAATCTTCCTTCCTGATATTGCCTTCTTCTAGCAGTTCGACGACCACGCCTAAATCCTCCCTGTTCATCCTCCTGCCTTACTATTTTGTTGTTGGTGCCAGTACTTCTCTTGCTGGATACAGTCCTCAAGCAATTGGATCTTATCAGTGATTTTCCACCTCTAATACTCTCATGTCTTCGTTTGCAATCTAGCTGTACATGA mRNA sequence ATGCTCAACCATACCTCCTCATCCTTGTCCAATGAAGTCTCTAGGTGCATGAAATATGTGGTAAAAATTCGTGCTTTACAGCCTTCATCTTCGACAGTTCGACGACCACGCCTAAATCCTCCCTGTTCATCCTCCTGCCTTACTATTTTGTTGTTGGTGCCAGTACTTCTCTTGCTGGATACAGTCCTCAAGCAATTGGATCTTATCAGTGATTTTCCACCTCTAATACTCTCATGTCTTCGTTTGCAATCTAGCTGTACATGA Coding sequence (CDS) ATGCTCAACCATACCTCCTCATCCTTGTCCAATGAAGTCTCTAGGTGCATGAAATATGTGGTAAAAATTCGTGCTTTACAGCCTTCATCTTCGACAGTTCGACGACCACGCCTAAATCCTCCCTGTTCATCCTCCTGCCTTACTATTTTGTTGTTGGTGCCAGTACTTCTCTTGCTGGATACAGTCCTCAAGCAATTGGATCTTATCAGTGATTTTCCACCTCTAATACTCTCATGTCTTCGTTTGCAATCTAGCTGTACATGA Protein sequence MLNHTSSSLSNEVSRCMKYVVKIRALQPSSSTVRRPRLNPPCSSSCLTILLLVPVLLLLDTVLKQLDLISDFPPLILSCLRLQSSCT
Homology
BLAST of PI0006378.1 vs. ExPASy TrEMBL
Match: A0A0A0K3D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039220 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19 Identity = 64/97 (65.98%), Postives = 66/97 (68.04%), Query Frame = 0
Query: 10 SNEVSRCMKYVVKIRALQPSSS--------------------TVRRPRLNPPCSSSCLTI 69
+NE SRC KY V+I ALQPSSS VRRPRLNPPCSSSCL I
Sbjct: 10 NNEFSRCFKYEVEILALQPSSSNEFEASVVQTRTRAMVVLLNAVRRPRLNPPCSSSCLAI 69
Query: 70 LLLVPVLLLLDTVLKQLDLISDFPPLILSCLRLQSSC 87
LLLVPVL LLDTVLKQ L S FPPLILSCLRLQSSC
Sbjct: 70 LLLVPVLPLLDTVLKQFVLFSAFPPLILSCLRLQSSC 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K3D1 | 1.1e-19 | 65.98 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039220 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0006378 | PI0006378 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0006378.1-exon | PI0006378.1-exon-chr01:3683976..3684145 | exon |
| PI0006378.1-exon | PI0006378.1-exon-chr01:3684481..3684574 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0006378.1-cds | PI0006378.1-cds-chr01:3683976..3684145 | CDS |
| PI0006378.1-cds | PI0006378.1-cds-chr01:3684481..3684574 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0006378.1 | PI0006378.1-protein | polypeptide |
|
