PI0016087 (gene) Melon (PI 482460) v1

Overview


Name	PI0016087
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ulp1-like peptidase
Location	chr06: 13614036 .. 13614227 (-)
RNA-Seq Expression	PI0016087
Synteny	PI0016087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGAAGGACGAATCATGGTATGAGATTCGTTAGTTGATTTGACGTTCGATCTGAAGCTGGCGAAAGAACTCGACAACATGAGATGTGTAGTCCCAACTATACTCCACTGCAGTGGCGTTTTCACGTTGAAGCCCAACTTGCCTGAGACACTGTGGCCATTGTATCGTGTTTGGGATGCACCCCAGTAA

mRNA sequence

ATGGTCGAAGGACGAATCATGCTGGCGAAAGAACTCGACAACATGAGATGTGTAGTCCCAACTATACTCCACTGCAGTGGCGTTTTCACGTTGAAGCCCAACTTGCCTGAGACACTGTGGCCATTGTATCGTGTTTGGGATGCACCCCAGTAA

Coding sequence (CDS)

ATGGTCGAAGGACGAATCATGCTGGCGAAAGAACTCGACAACATGAGATGTGTAGTCCCAACTATACTCCACTGCAGTGGCGTTTTCACGTTGAAGCCCAACTTGCCTGAGACACTGTGGCCATTGTATCGTGTTTGGGATGCACCCCAGTAA

Protein sequence

MVEGRIMLAKELDNMRCVVPTILHCSGVFTLKPNLPETLWPLYRVWDAPQ

Homology

[Close]

BLAST of PI0016087 vs. ExPASy TrEMBL
Match: A0A5D3DYB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00550 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 5   RIMLAKELDNMRCVVPTILHCSGVFTLKPNLPETLWPLYRV 46
           ++ L KELDNMRC+V T+LHC+GVF +K NLP TLW +Y V
Sbjct: 119 QVSLDKELDNMRCIVSTLLHCNGVFIVKLNLPSTLWLVYHV 159

[Close]

BLAST of PI0016087 vs. ExPASy TrEMBL
Match: A0A5A7TYT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00410 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 5   RIMLAKELDNMRCVVPTILHCSGVFTLKPNLPETLWPLYRV 46
           ++ L KELDNMRC+V T+LHC+GVF +K NLP TLW +Y V
Sbjct: 94  QVSLDKELDNMRCIVSTLLHCNGVFIVKLNLPSTLWLVYHV 134

[Close]

BLAST of PI0016087 vs. ExPASy TrEMBL
Match: A0A0A0LHH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072470 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-05
Identity = 31/62 (50.00%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 1  MVEGRIM-------------LAKELDNMRCVVPTILHCSGVFTLKPNLPETLWPLYRVWD 50
          MVEGRIM             L +EL+NMR VVP  L+C G+F LKPNL    WPLY   D
Sbjct: 1  MVEGRIMVRDLFIDLMMDLNLTEELNNMRYVVPAPLNCGGIFMLKPNLRGKSWPLYHNQD 60

[Close]

BLAST of PI0016087 vs. ExPASy TrEMBL
Match: A0A5A7UCG2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00420 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-04
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 8  LAKELDNMRCVVPTILHCSGVFTLKPNLPET 39
          L KELDNMRCVVP +LH  G+F LKPNLP T
Sbjct: 37 LMKELDNMRCVVPALLHLDGIFMLKPNLPLT 67

[Close]

BLAST of PI0016087 vs. ExPASy TrEMBL
Match: A0A5D3DKS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00680 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-04
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 0


Query: 6   IMLAKELDNMRCVVPTILHCSGVFTLKPNLPET 39
           + L KELDNMRCVVP +LH  G+F LKPNLP T
Sbjct: 154 LYLMKELDNMRCVVPALLHLDGIFMLKPNLPLT 186

[Close]

BLAST of PI0016087 vs. NCBI nr
Match: KAA0046525.1 (uncharacterized protein E6C27_scaffold114G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 7.6e-07
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 5   RIMLAKELDNMRCVVPTILHCSGVFTLKPNLPETLWPLYRV 46
           ++ L KELDNMRC+V T+LHC+GVF +K NLP TLW +Y V
Sbjct: 94  QVSLDKELDNMRCIVSTLLHCNGVFIVKLNLPSTLWLVYHV 134

[Close]

BLAST of PI0016087 vs. NCBI nr
Match: TYK28733.1 (uncharacterized protein E5676_scaffold403G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 7.6e-07
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 5   RIMLAKELDNMRCVVPTILHCSGVFTLKPNLPETLWPLYRV 46
           ++ L KELDNMRC+V T+LHC+GVF +K NLP TLW +Y V
Sbjct: 119 QVSLDKELDNMRCIVSTLLHCNGVFIVKLNLPSTLWLVYHV 159

[Close]

BLAST of PI0016087 vs. NCBI nr
Match: KGN61233.1 (hypothetical protein Csa_005995 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-05
Identity = 31/62 (50.00%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 1  MVEGRIM-------------LAKELDNMRCVVPTILHCSGVFTLKPNLPETLWPLYRVWD 50
          MVEGRIM             L +EL+NMR VVP  L+C G+F LKPNL    WPLY   D
Sbjct: 1  MVEGRIMVRDLFIDLMMDLNLTEELNNMRYVVPAPLNCGGIFMLKPNLRGKSWPLYHNQD 60

[Close]

BLAST of PI0016087 vs. NCBI nr
Match: KAA0051325.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-04
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 8  LAKELDNMRCVVPTILHCSGVFTLKPNLPET 39
          L KELDNMRCVVP +LH  G+F LKPNLP T
Sbjct: 37 LMKELDNMRCVVPALLHLDGIFMLKPNLPLT 67

[Close]

BLAST of PI0016087 vs. NCBI nr
Match: TYK23889.1 (uncharacterized protein E5676_scaffold419G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-04
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 0


Query: 6   IMLAKELDNMRCVVPTILHCSGVFTLKPNLPET 39
           + L KELDNMRCVVP +LH  G+F LKPNLP T
Sbjct: 154 LYLMKELDNMRCVVPALLHLDGIFMLKPNLPLT 186

The following BLAST results are available for this feature:

BLAST of PI0016087 vs.


Match Name	E-value	Identity	Description

BLAST of PI0016087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYB2	3.7e-07	63.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TYT7	3.7e-07	63.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LHH4	1.2e-05	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072470 PE=4 SV=1	[more]
A0A5A7UCG2	2.2e-04	74.19	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G0...	[more]
A0A5D3DKS2	2.2e-04	69.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0016087 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046525.1	7.6e-07	63.41	uncharacterized protein E6C27_scaffold114G00410 [Cucumis melo var. makuwa]	[more]
TYK28733.1	7.6e-07	63.41	uncharacterized protein E5676_scaffold403G00550 [Cucumis melo var. makuwa]	[more]
KGN61233.1	2.4e-05	50.00	hypothetical protein Csa_005995 [Cucumis sativus]	[more]
KAA0051325.1	4.6e-04	74.19	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
TYK23889.1	4.6e-04	69.70	uncharacterized protein E5676_scaffold419G00680 [Cucumis melo var. makuwa]	[more]

BLAST of PI0016087 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016087.1	PI0016087.1	mRNA