MS001231 (gene) Bitter gourd (TR) v1

Overview


Name	MS001231
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Location	scaffold36: 2523192 .. 2524891 (-)
RNA-Seq Expression	MS001231
Synteny	MS001231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGAACCCCAGAGAATCTAGACGCCGGCGGATCCTGGAGCGAGGTTCCGACCGTTTGGCCCTAATCACCGGTCAGATCCAGTCCCTTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCGCCTTACGCTGGAACTGAGGATTCATCAACCCAGCCGTTGATTTCTGATCGTCAGGATCTCCAACCTCGTATTTCCGATCAACACACCGGTATTCTTCTTCTTTTCTTTGTTGCTTTCTGGACTTCGCGTGATTTGACTGAAAATCTGTTTTCTGGAGGAGTTTTGTTGCGAGAAAATGCGATTGTGTTTCCTCTTTTCTGCTTATCTTTCCTTACCGAATGGTGTAATGAAAAGCTAAATTAGTGGTAGGTTTAGGAATTTTATTTAAGCAATTCATTATTTGCTGGTTATATTTTTAATTAAAAAAAATTAATGACGGTGAATAAGGTAAGAATGTGGGTCTGACGTGCACCAACTTGGGTAATCTAGGTTCCAAAGTCTCGTCTTTCTATTGCAATGATTCCAAGTAAACGTAACAAGTCAAATTCTAAGCTAAAATTTGTGTAGAAGAATTGTTGCTAAAAAGGTTTAGAGCCCTTGACCTGCAATTCAATTTGTGCTGTTATATTTACCCCAACAGAAGGTTGTCATGGTATAAATTATTTAGAAAAGTTGAATACAGAAAAAGTAGCATTGGAATTGAAATGGCATAGATCGCTATTTGAAACCATGTATTTTGAAGAAGTTGCATTGAAATTGAGTTATTTCCATGGAAAAAAGTTCAGTACTAGAGAAACCTACTATTCGAAACCATTGTAGTGTATCAATCTACCCTTGTTGGCCTCCTCACAGTCTTACTTTGCAAAATTACCTGATTAGCATGAGGATTTTCAGCATTGAATTCATTTCTCCTCCACCTTACAGAATTTTTCTGTAGGTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTACTCAAATGGAAATTAAAATTATTGTTTTGCTCACATTTCACGCTCCTTGTGCAGTTTCTGATGAAAAGGACAAGCTGGTAGGTTCTACATTGCAACATAAGGATCCTCAGATCGATGCTAGGTCTTCTGCATATCATGGAACCAGTTCGGCTCCTCTTTCGAGCAAACATAAGGCGGTAGAAACTGCAGTAGCTTCTACTCAAGAAGATGTTGGAAAAGCACCGCCCCGTCTCGCCCGATCTGAAGGTCAAAATTCATCTCTTTCTACATTGGGCAGAGATCAATGCTACAATCCAAAATTGCCACCCGTCACTTCCTTCTCTTTAAATGAATTAAGTTCAGCCATTTCTGAATCTGAGATGACCCGCCTTTGCTTTTCGGCTACTATAGCCTTTCTAGTAGTTGCATCATATGTAGGATTTCCTTTCTTAGGCCAGAGTCTTACGAGAATCGGTTTTGGATCTAGACCCCTCTATCTTCTCTTGCTCACTAATGTAACAGTTGTACTTGGTAGGCTTCTTTTCACCAAAAAGAAGGGTTTTAGAGGGCCTCATAGAGGAGATGGTCAAGTAACTCCACTTGTAGGACAAAGTTCAATTGAACAAATTGGTAAGGTTTTAGAGGCAGGTTTATTGGTTCAGAAGGCAATGGGAGCAATTTTCATGGACTGCAGTGTGTTTGCAGTAATCGTCGTATCGGGACTTTCGTTTGTGCAGCAGCTT

mRNA sequence

ATGGCGGCGAACCCCAGAGAATCTAGACGCCGGCGGATCCTGGAGCGAGGTTCCGACCGTTTGGCCCTAATCACCGGTCAGATCCAGTCCCTTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCGCCTTACGCTGGAACTGAGGATTCATCAACCCAGCCGTTGATTTCTGATCGTCAGGATCTCCAACCTCGTATTTCCGATCAACACACCGTTTCTGATGAAAAGGACAAGCTGGTAGGTTCTACATTGCAACATAAGGATCCTCAGATCGATGCTAGGTCTTCTGCATATCATGGAACCAGTTCGGCTCCTCTTTCGAGCAAACATAAGGCGGTAGAAACTGCAGTAGCTTCTACTCAAGAAGATGTTGGAAAAGCACCGCCCCGTCTCGCCCGATCTGAAGGTCAAAATTCATCTCTTTCTACATTGGGCAGAGATCAATGCTACAATCCAAAATTGCCACCCGTCACTTCCTTCTCTTTAAATGAATTAAGTTCAGCCATTTCTGAATCTGAGATGACCCGCCTTTGCTTTTCGGCTACTATAGCCTTTCTAGTAGTTGCATCATATGTAGGATTTCCTTTCTTAGGCCAGAGTCTTACGAGAATCGGTTTTGGATCTAGACCCCTCTATCTTCTCTTGCTCACTAATGTAACAGTTGTACTTGGTAGGCTTCTTTTCACCAAAAAGAAGGGTTTTAGAGGGCCTCATAGAGGAGATGGTCAAGTAACTCCACTTGTAGGACAAAGTTCAATTGAACAAATTGGTAAGGTTTTAGAGGCAGGTTTATTGGTTCAGAAGGCAATGGGAGCAATTTTCATGGACTGCAGTGTGTTTGCAGTAATCGTCGTATCGGGACTTTCGTTTGTGCAGCAGCTT

Coding sequence (CDS)

ATGGCGGCGAACCCCAGAGAATCTAGACGCCGGCGGATCCTGGAGCGAGGTTCCGACCGTTTGGCCCTAATCACCGGTCAGATCCAGTCCCTTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCGCCTTACGCTGGAACTGAGGATTCATCAACCCAGCCGTTGATTTCTGATCGTCAGGATCTCCAACCTCGTATTTCCGATCAACACACCGTTTCTGATGAAAAGGACAAGCTGGTAGGTTCTACATTGCAACATAAGGATCCTCAGATCGATGCTAGGTCTTCTGCATATCATGGAACCAGTTCGGCTCCTCTTTCGAGCAAACATAAGGCGGTAGAAACTGCAGTAGCTTCTACTCAAGAAGATGTTGGAAAAGCACCGCCCCGTCTCGCCCGATCTGAAGGTCAAAATTCATCTCTTTCTACATTGGGCAGAGATCAATGCTACAATCCAAAATTGCCACCCGTCACTTCCTTCTCTTTAAATGAATTAAGTTCAGCCATTTCTGAATCTGAGATGACCCGCCTTTGCTTTTCGGCTACTATAGCCTTTCTAGTAGTTGCATCATATGTAGGATTTCCTTTCTTAGGCCAGAGTCTTACGAGAATCGGTTTTGGATCTAGACCCCTCTATCTTCTCTTGCTCACTAATGTAACAGTTGTACTTGGTAGGCTTCTTTTCACCAAAAAGAAGGGTTTTAGAGGGCCTCATAGAGGAGATGGTCAAGTAACTCCACTTGTAGGACAAAGTTCAATTGAACAAATTGGTAAGGTTTTAGAGGCAGGTTTATTGGTTCAGAAGGCAATGGGAGCAATTTTCATGGACTGCAGTGTGTTTGCAGTAATCGTCGTATCGGGACTTTCGTTTGTGCAGCAGCTT

Protein sequence

MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQDLQPRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQEDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSATIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGDGQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL

Homology

[Close]

BLAST of MS001231 vs. NCBI nr
Match: XP_022131304.1 (uncharacterized protein LOC111004568 [Momordica charantia])

HSP 1 Score: 540.4 bits (1391), Expect = 9.5e-150
Identity = 290/293 (98.98%), Postives = 290/293 (98.98%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAANPRESRRRRILERGSDRLALITGQIQSL  PSPSPSPSPYAGTEDSSTQPLISDRQD
Sbjct: 1   MAANPRESRRRRILERGSDRLALITGQIQSL--PSPSPSPSPYAGTEDSSTQPLISDRQD 60

Query: 61  LQPRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120
           LQPRISDQHTVSDEK KLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ
Sbjct: 61  LQPRISDQHTVSDEKGKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120

Query: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180
           EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA
Sbjct: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180

Query: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240
           TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD
Sbjct: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240

Query: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL
Sbjct: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 291

[Close]

BLAST of MS001231 vs. NCBI nr
Match: XP_038885578.1 (uncharacterized protein LOC120075907 [Benincasa hispida])

HSP 1 Score: 382.5 bits (981), Expect = 3.3e-102
Identity = 218/294 (74.15%), Postives = 242/294 (82.31%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAANPRE+RRRRILERGSDRLALITGQIQSLPS S SP PS Y    DSS+QPLIS+ QD
Sbjct: 1   MAANPREARRRRILERGSDRLALITGQIQSLPSSSASP-PS-YDEHMDSSSQPLISNLQD 60

Query: 61  LQP-RISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVAST 120
           L+P RIS Q TVS +KDKL+GSTLQH DPQI ARSSAY+GTS+ PL  K   +ETAVAST
Sbjct: 61  LRPSRISAQPTVSHDKDKLIGSTLQHNDPQISARSSAYNGTSTVPLPRKSNEIETAVAST 120

Query: 121 QEDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFS 180
            ED G AP     S+G+++SLST  RDQ   PKLP V+SFSLNELSSAISESE TRLCFS
Sbjct: 121 PEDGGSAPSHFTPSDGRDASLSTFSRDQQSKPKLPLVSSFSLNELSSAISESEKTRLCFS 180

Query: 181 ATIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRG 240
           A IAFLVVASYVGFPFLGQS+ R  FGS+PLYL+L TN TVVLGRLLFTK+KGFR   RG
Sbjct: 181 AIIAFLVVASYVGFPFLGQSVMRTVFGSKPLYLVLFTNATVVLGRLLFTKQKGFRVSDRG 240

Query: 241 DGQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
            GQV P  GQSS+EQIGKVLEAG++ QKAMGAIFMDCSVFAVI+V GL F+Q+L
Sbjct: 241 QGQVNPPEGQSSVEQIGKVLEAGIVAQKAMGAIFMDCSVFAVIIVLGLPFMQRL 292

[Close]

BLAST of MS001231 vs. NCBI nr
Match: XP_023545800.1 (uncharacterized protein LOC111805127 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.4 bits (960), Expect = 9.0e-100
Identity = 216/293 (73.72%), Postives = 236/293 (80.55%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAAN RESRRRRILERGS+RLALITGQIQSLPSPS SP P+      DS  QP IS+ QD
Sbjct: 1   MAANTRESRRRRILERGSERLALITGQIQSLPSPSISPPPN--EENMDSLPQPSISNLQD 60

Query: 61  LQPRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120
           L+PRISDQ TVS + DKL+ STLQHKDPQI ARSS   G S APL SK   +E AVAST 
Sbjct: 61  LRPRISDQPTVSHDIDKLIDSTLQHKDPQISARSSVNDGASMAPLLSKSNEIEHAVASTP 120

Query: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180
           +D G+AP  +  SEG++SSLST GRDQ   PK  P++SFSL ELSSAISESEMTRLCFSA
Sbjct: 121 QDGGRAPSNVIPSEGRDSSLSTYGRDQRSKPKFQPLSSFSLKELSSAISESEMTRLCFSA 180

Query: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240
            IAFLVVASYVGFPFLGQSL RI FGSRP+YL+LLTN TVVLGRLLFTK+KG R   RG+
Sbjct: 181 IIAFLVVASYVGFPFLGQSLMRIVFGSRPIYLVLLTNATVVLGRLLFTKQKGSRVSDRGE 240

Query: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           GQV P  GQ S EQIG VLEAGL+ QKAMGAIFMD SVFAVIVVSGLSFVQ+L
Sbjct: 241 GQVPPPEGQGSFEQIGNVLEAGLVAQKAMGAIFMDISVFAVIVVSGLSFVQRL 291

[Close]

BLAST of MS001231 vs. NCBI nr
Match: XP_004138786.1 (uncharacterized protein LOC101211157 [Cucumis sativus] >KGN62839.1 hypothetical protein Csa_022655 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-98
Identity = 210/294 (71.43%), Postives = 239/294 (81.29%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAAN RE+RRRRILERGSDRLALITGQIQSLPS S S SP P+    +SS+QPLIS+ QD
Sbjct: 1   MAANQREARRRRILERGSDRLALITGQIQSLPS-SSSASPPPFDQNTNSSSQPLISNLQD 60

Query: 61  LQ-PRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVAST 120
           L+ P  SDQ TVS + DK VGSTL H DPQI ARSS Y+GTS+APL SK   +E+AVAST
Sbjct: 61  LRPPPSSDQPTVSHDIDKTVGSTLPHNDPQISARSSTYYGTSTAPLLSKSNEIESAVAST 120

Query: 121 QEDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFS 180
            ED G+APP  + SEGQ++ LST+ RDQ   PKLP V+SFS+NELS  ISESE TRLCFS
Sbjct: 121 PEDSGRAPPGFSLSEGQDAPLSTVARDQHSKPKLPLVSSFSINELSLVISESEKTRLCFS 180

Query: 181 ATIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRG 240
             IAFLVVA YVGFPFLGQS+ RI FG RPLYL+LLTN T+VLG+LLFTK+KG+R  +RG
Sbjct: 181 TIIAFLVVAPYVGFPFLGQSVMRIVFGFRPLYLVLLTNATIVLGKLLFTKQKGYRVTNRG 240

Query: 241 DGQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           DGQV P   QSS+EQIGKVLEA L+ QKAMGAIFMDCSV+AVIVVSGLS VQ+L
Sbjct: 241 DGQVNPPEAQSSVEQIGKVLEASLVAQKAMGAIFMDCSVYAVIVVSGLSLVQRL 293

[Close]

BLAST of MS001231 vs. NCBI nr
Match: XP_022996481.1 (uncharacterized protein LOC111491715 [Cucurbita maxima])

HSP 1 Score: 367.9 bits (943), Expect = 8.4e-98
Identity = 214/293 (73.04%), Postives = 237/293 (80.89%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAAN RESRRRRILERGS+RLALITGQIQSLPSPS SP P+      DS  QP IS+ QD
Sbjct: 1   MAANARESRRRRILERGSERLALITGQIQSLPSPSISPLPND--ENIDSLPQPSISNLQD 60

Query: 61  LQPRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120
           L+PRISDQ TVS + DKL+GS LQHKDP+I  RSSAY G S+APL SK   +E AVAST 
Sbjct: 61  LRPRISDQPTVSHDIDKLIGSALQHKDPRISTRSSAYDGASTAPLLSKSNEIEHAVASTP 120

Query: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180
           +D G+AP  +  SEG++SSLST GRDQ   PK   ++SFSL +LSSAISESEMTRLCFSA
Sbjct: 121 QDGGRAPSHVTLSEGRDSSLSTYGRDQRSKPKF-QLSSFSLKDLSSAISESEMTRLCFSA 180

Query: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240
            IAFLVVASYVGFPFLGQSL RI FGSRP+YL+LLTN TVVLGRLLF K+KG R   RG+
Sbjct: 181 IIAFLVVASYVGFPFLGQSLMRIVFGSRPVYLVLLTNATVVLGRLLFAKQKGSRVSDRGE 240

Query: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           GQV P  GQSS EQIG VLEAGL+ QKAMGAIFMD SVFAVIVVSGLSFVQ+L
Sbjct: 241 GQVPPPEGQSSFEQIGNVLEAGLVAQKAMGAIFMDISVFAVIVVSGLSFVQRL 290

[Close]

BLAST of MS001231 vs. ExPASy TrEMBL
Match: A0A6J1BPV3 (uncharacterized protein LOC111004568 OS=Momordica charantia OX=3673 GN=LOC111004568 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.6e-150
Identity = 290/293 (98.98%), Postives = 290/293 (98.98%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAANPRESRRRRILERGSDRLALITGQIQSL  PSPSPSPSPYAGTEDSSTQPLISDRQD
Sbjct: 1   MAANPRESRRRRILERGSDRLALITGQIQSL--PSPSPSPSPYAGTEDSSTQPLISDRQD 60

Query: 61  LQPRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120
           LQPRISDQHTVSDEK KLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ
Sbjct: 61  LQPRISDQHTVSDEKGKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120

Query: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180
           EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA
Sbjct: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180

Query: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240
           TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD
Sbjct: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240

Query: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL
Sbjct: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 291

[Close]

BLAST of MS001231 vs. ExPASy TrEMBL
Match: A0A0A0LP83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375790 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 6.3e-99
Identity = 210/294 (71.43%), Postives = 239/294 (81.29%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAAN RE+RRRRILERGSDRLALITGQIQSLPS S S SP P+    +SS+QPLIS+ QD
Sbjct: 1   MAANQREARRRRILERGSDRLALITGQIQSLPS-SSSASPPPFDQNTNSSSQPLISNLQD 60

Query: 61  LQ-PRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVAST 120
           L+ P  SDQ TVS + DK VGSTL H DPQI ARSS Y+GTS+APL SK   +E+AVAST
Sbjct: 61  LRPPPSSDQPTVSHDIDKTVGSTLPHNDPQISARSSTYYGTSTAPLLSKSNEIESAVAST 120

Query: 121 QEDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFS 180
            ED G+APP  + SEGQ++ LST+ RDQ   PKLP V+SFS+NELS  ISESE TRLCFS
Sbjct: 121 PEDSGRAPPGFSLSEGQDAPLSTVARDQHSKPKLPLVSSFSINELSLVISESEKTRLCFS 180

Query: 181 ATIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRG 240
             IAFLVVA YVGFPFLGQS+ RI FG RPLYL+LLTN T+VLG+LLFTK+KG+R  +RG
Sbjct: 181 TIIAFLVVAPYVGFPFLGQSVMRIVFGFRPLYLVLLTNATIVLGKLLFTKQKGYRVTNRG 240

Query: 241 DGQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           DGQV P   QSS+EQIGKVLEA L+ QKAMGAIFMDCSV+AVIVVSGLS VQ+L
Sbjct: 241 DGQVNPPEAQSSVEQIGKVLEASLVAQKAMGAIFMDCSVYAVIVVSGLSLVQRL 293

[Close]

BLAST of MS001231 vs. ExPASy TrEMBL
Match: A0A6J1K4V4 (uncharacterized protein LOC111491715 OS=Cucurbita maxima OX=3661 GN=LOC111491715 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 4.1e-98
Identity = 214/293 (73.04%), Postives = 237/293 (80.89%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAAN RESRRRRILERGS+RLALITGQIQSLPSPS SP P+      DS  QP IS+ QD
Sbjct: 1   MAANARESRRRRILERGSERLALITGQIQSLPSPSISPLPND--ENIDSLPQPSISNLQD 60

Query: 61  LQPRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120
           L+PRISDQ TVS + DKL+GS LQHKDP+I  RSSAY G S+APL SK   +E AVAST 
Sbjct: 61  LRPRISDQPTVSHDIDKLIGSALQHKDPRISTRSSAYDGASTAPLLSKSNEIEHAVASTP 120

Query: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180
           +D G+AP  +  SEG++SSLST GRDQ   PK   ++SFSL +LSSAISESEMTRLCFSA
Sbjct: 121 QDGGRAPSHVTLSEGRDSSLSTYGRDQRSKPKF-QLSSFSLKDLSSAISESEMTRLCFSA 180

Query: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240
            IAFLVVASYVGFPFLGQSL RI FGSRP+YL+LLTN TVVLGRLLF K+KG R   RG+
Sbjct: 181 IIAFLVVASYVGFPFLGQSLMRIVFGSRPVYLVLLTNATVVLGRLLFAKQKGSRVSDRGE 240

Query: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           GQV P  GQSS EQIG VLEAGL+ QKAMGAIFMD SVFAVIVVSGLSFVQ+L
Sbjct: 241 GQVPPPEGQSSFEQIGNVLEAGLVAQKAMGAIFMDISVFAVIVVSGLSFVQRL 290

[Close]

BLAST of MS001231 vs. ExPASy TrEMBL
Match: A0A6J1HDN9 (uncharacterized protein LOC111462641 OS=Cucurbita moschata OX=3662 GN=LOC111462641 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 5.3e-98
Identity = 213/293 (72.70%), Postives = 235/293 (80.20%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAAN RESRRRRILERGS+RLALITGQIQSLPSPS SP P+      +S  QP IS+ QD
Sbjct: 1   MAANARESRRRRILERGSERLALITGQIQSLPSPSISPPPND--ENINSLPQPSISNLQD 60

Query: 61  LQPRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQ 120
           L+PRISDQ TVS + DKL+GSTLQ KDPQI ARSS   G S APL SK   +E AVAST 
Sbjct: 61  LRPRISDQPTVSRDIDKLIGSTLQQKDPQISARSSVNDGASMAPLLSKSNEIEHAVASTP 120

Query: 121 EDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSA 180
           +D G+AP  +  SEG++SSLST GRD+   PK  P++SFSL ELSSAISESEMTRLCFSA
Sbjct: 121 QDGGRAPSHVTPSEGRDSSLSTYGRDRRSKPKFQPLSSFSLKELSSAISESEMTRLCFSA 180

Query: 181 TIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRGD 240
            IAFLVVASYVGFPFLGQSL RI FGSRP+YL+LLTN TVVLGRLLF K+KG R   RG+
Sbjct: 181 IIAFLVVASYVGFPFLGQSLMRIVFGSRPVYLVLLTNATVVLGRLLFAKQKGSRVSDRGE 240

Query: 241 GQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           GQV P  GQ S EQIG VLEAGL+ QKAMGAIFMD SVFAVIVVSGLSFVQ+L
Sbjct: 241 GQVPPPEGQGSFEQIGNVLEAGLVAQKAMGAIFMDISVFAVIVVSGLSFVQRL 291

[Close]

BLAST of MS001231 vs. ExPASy TrEMBL
Match: A0A1S3BBA5 (uncharacterized protein LOC103488205 OS=Cucumis melo OX=3656 GN=LOC103488205 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 1.1e-95
Identity = 208/294 (70.75%), Postives = 231/294 (78.57%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MAAN RE+RRRRILERGSDRLALITGQIQSL  PS S SP PY    DSS+QPLIS+ QD
Sbjct: 1   MAANQREARRRRILERGSDRLALITGQIQSL--PSSSASPPPYDQNTDSSSQPLISNLQD 60

Query: 61  LQ-PRISDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVAST 120
           L+ P  SDQ TVS +KDK VGS+L H DPQI  RSS Y GTS+APL  K   +E+AVAST
Sbjct: 61  LRPPPNSDQPTVSHDKDKTVGSSLPHNDPQISVRSSTYDGTSTAPLMGKSNEIESAVAST 120

Query: 121 QEDVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFS 180
            ED G+APP  + SEGQ++ LST  RDQ   PKLP V+SFS+NELS AISESE TRLCFS
Sbjct: 121 PEDSGRAPPCFSPSEGQDAPLSTFARDQHSKPKLPLVSSFSINELSLAISESEKTRLCFS 180

Query: 181 ATIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPHRG 240
             IAFLVVAS V FPFLGQS+ R  FG RPLYL+LLTN T+VLGRLLFTK+KGFR   R 
Sbjct: 181 TIIAFLVVASCVKFPFLGQSVMRFLFGFRPLYLVLLTNATIVLGRLLFTKQKGFRVSDRR 240

Query: 241 DGQVTPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFVQQL 294
           D QV P  GQSS+EQIGKVLEA L+ QKAMGAI MDCSVFAVIVVSGLS +Q+L
Sbjct: 241 DSQVNPPEGQSSVEQIGKVLEASLVAQKAMGAILMDCSVFAVIVVSGLSLLQRL 292

[Close]

BLAST of MS001231 vs. TAIR 10
Match: AT4G32680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 9.4e-31
Identity = 107/303 (35.31%), Postives = 158/303 (52.15%), Query Frame = 0


Query: 1   MAANPRESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQD 60
           MA+N RE+RRR+IL+RGSDRLA ITGQI  +PSP PS S S  + ++  + Q L      
Sbjct: 1   MASNSREARRRKILDRGSDRLAFITGQINGVPSPPPSDSTSSLSQSDLQTDQSL---PDT 60

Query: 61  LQPRISDQHTVSDEKDKLVGSTLQHKDPQIDAR-----SSAYHGTSSAPLSSKHKAVETA 120
           + PR  DQ   + E      +   H+D   DA          H +   PL  +  A   A
Sbjct: 61  IPPR--DQILKAQEI-----AFTSHQDNISDAAMLENVDHIIHQSREEPLQPQRHAETLA 120

Query: 121 VASTQE--DVGKAPPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEM 180
            AS  +  D     P    S  QN S+  LG  Q + P +  V + +   + +AI  SE 
Sbjct: 121 EASASDPRDTTTIQPPPTTSSVQNPSVVDLGASQAFIPVVSFVNAITPKHIGAAIDASEY 180

Query: 181 TRLCFSATIAFLVVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGF 240
            R+  +  IA +V+ S++GF  LG  ++      RP++LL+LT+ T+VLGR+L +     
Sbjct: 181 ARMFTALAIALVVILSHLGFSSLGNIVS-----FRPVFLLVLTDATIVLGRVLLS----- 240

Query: 241 RGPHRGDGQV---TPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVVSGLSFV 294
              HRGD      T + GQ  ++Q+G  LE  ++V+K M A+ MD S++AVI++ GL   
Sbjct: 241 ---HRGDSSSASGTVMSGQGIVDQVGNALETVMMVKKIMDALLMDFSLYAVILICGLLVT 280

[Close]

BLAST of MS001231 vs. TAIR 10
Match: AT1G52343.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 8.0e-14
Identity = 80/281 (28.47%), Postives = 130/281 (46.26%), Query Frame = 0


Query: 6   RESRRRRILERGSDRLALITGQIQSLPSPSPSPSPSPYAGTEDSSTQPLISDRQDLQPRI 65
           RE RRRRI+ERGSDRLALITGQ+ +L   SPS S S  A    + ++  +   +      
Sbjct: 5   REERRRRIMERGSDRLALITGQLHNLDPSSPSSSSSSSASHNRTYSESFMPQTK------ 64

Query: 66  SDQHTVSDEKDKLVGSTLQHKDPQIDARSSAYHGTSSAPLSSKHKAVETAVASTQEDVGK 125
           SD H +                  +++ S  Y         S+   + T +         
Sbjct: 65  SDHHQI------------------LESPSLKYQFKEEVKARSEEPKLSTVL--------H 124

Query: 126 APPRLARSEGQNSSLSTLGRDQCYNPKLPPVTSFSLNELSSAISESEMTRLCFSATIAFL 185
            P ++  ++ + ++ S   ++Q       P+  FS  +L+++I  SE TR   S TIA  
Sbjct: 125 KPLKIEPTKQEEATRSQKSQNQ------RPICFFSSKKLNASIISSERTRSLSSLTIAAF 184

Query: 186 VVASYVGFPFLGQSLTRIGFGSRPLYLLLLTNVTVVLGRLLFTKKKGFRGPH--RGDGQV 245
           VV      P L  + +      RPL+LL+LT+  +V+  L  T+  G    H    DG+ 
Sbjct: 185 VVL----LPRLNITSSNTILALRPLWLLILTDCAIVMSHLT-TEASGGGLSHEMEEDGKG 242

Query: 246 TPLVGQSSIEQIGKVLEAGLLVQKAMGAIFMDCSVFAVIVV 285
                  +     ++LE G++V +A+  +F+DCS++ V+VV
Sbjct: 245 RDGNNGENWSDAERLLERGVVVYQALRGMFIDCSLYMVVVV 242

The following BLAST results are available for this feature:

BLAST of MS001231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131304.1	9.5e-150	98.98	uncharacterized protein LOC111004568 [Momordica charantia]	[more]
XP_038885578.1	3.3e-102	74.15	uncharacterized protein LOC120075907 [Benincasa hispida]	[more]
XP_023545800.1	9.0e-100	73.72	uncharacterized protein LOC111805127 [Cucurbita pepo subsp. pepo]	[more]
XP_004138786.1	1.3e-98	71.43	uncharacterized protein LOC101211157 [Cucumis sativus] >KGN62839.1 hypothetical ...	[more]
XP_022996481.1	8.4e-98	73.04	uncharacterized protein LOC111491715 [Cucurbita maxima]	[more]

BLAST of MS001231 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BPV3	4.6e-150	98.98	uncharacterized protein LOC111004568 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A0A0LP83	6.3e-99	71.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375790 PE=4 SV=1	[more]
A0A6J1K4V4	4.1e-98	73.04	uncharacterized protein LOC111491715 OS=Cucurbita maxima OX=3661 GN=LOC111491715...	[more]
A0A6J1HDN9	5.3e-98	72.70	uncharacterized protein LOC111462641 OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A1S3BBA5	1.1e-95	70.75	uncharacterized protein LOC103488205 OS=Cucumis melo OX=3656 GN=LOC103488205 PE=...	[more]

BLAST of MS001231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32680.1	9.4e-31	35.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G52343.1	8.0e-14	28.47	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..114
None	No IPR available	PANTHER	PTHR35469:SF4	TRANSMEMBRANE PROTEIN	coord: 1..289
None	No IPR available	PANTHER	PTHR35469	TRANSMEMBRANE PROTEIN	coord: 1..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001231.1	MS001231.1	mRNA