MS001065 (gene) Bitter gourd (TR) v1

Overview


Name	MS001065
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin response factor
Location	scaffold36: 1224358 .. 1226897 (-)
RNA-Seq Expression	MS001065
Synteny	MS001065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGATGGACCCGAAACTCTGGCGTGCTTTTGCGGGTAATTCTGTCCAAATTCACACTGTAGGCTCTCAGGTTTACTATTTCACTCAAGGGCATGTGGAGCAGTCTTCTTCCGCTCCATGCCTTTCCAGGTCTGTTCTCTCCAATCCGGCTACTAAATGTCTCGTCACTGCTGCTCACTTCAATGCGGATCCTCTTACTGATGAGGTCTGCATCAAGTTGAATCTTCATCCCTTTGGACATGGCGGGGAGGTGCCTGTTCTGCCTCTTGCGGGCTCTGATGATAATAGCGGGGAGGGAGATAGAGTTGTATCGTTTGCTAAGATTCTCACGTCTTCTGATGCTAATAACGGCGGTGGGTTCTCTGTGCCGCGGTTCTGTGCCGACTCTATTTTTCCTCCGTTGAATTACCTGGCGGATCCGCCGGTGCAGACTTTGTCGATTACTGATGTTCATGGAGTTGTTTGGAATTTTCGCCATATTTTCCGTGGGACGCCGAGGCGGCATTTGCTCACTACCGGATGGAGTAAGTTCGTGAATAATAAGAAGCTGGTTGCGGGAGATTCTGTCGTTTTCGCGAAGAATTCTAGAGGGGACATGTTCGTTGGTATTCGTCGCGCTACAAAGGGTAATACAGGCGGTGATTGCGGCAGATGGCATAGCCAGATTGGTGGAGTGAGATACAGTGCGGAGGAGAACCGTTCAGGAGAAGGAGGAAGAGAAGTCTTCTCTCGGAATGGTATTGGGAAGCTGCCGGCCGAGGCGGTTGCCAATGCTGCGGAATTGGCAGCGCAATTTAGGCCATTCGAGGTGGTTTATTATCCTAGGGCTGGTTGGTCGGAATTTGTAGTTAAAGCCGAGACGGTGGACAAGGCGCTGAGTTATTATTGGTCGTCTGGATTAAGAGTGAAAATGGCCGTAGACACGGAGGATTCGTCGAAGACGACATGGTATCAGGGGACTGTAACTTCAGTTTCTATCCCTGAACACGGACCTTGGAGGAATTCCCCATGGCGTATGCTGCAGGTAGACAGTTTTTATGTTCTTAATTTCTTATGTGTTGGAGCGATCGTATCTACTTGCGATTATGTATTGAATTTTGCTTCATTTGATTGTCTGTGTTTGTTGATCGTTTTGTTTGTATTTACATTTGTTTCTAAGCTCAGCGTGGCAATTAGTGATAAGACACTGGATAGGATCTATGACGCTATGAACTTGTTTTTAGGATTTATACCAAATTCTGTGTGATAGTAAATCAGGAAACAATAGAAGTGGTGGAGTCTCACTCTCTAGGTAATTTCATTCTGGATAAGATACTGACATCTTTAAACCTTATATCTTTTCTTCTTAAGAATTAGTCTGTAATTTGTTTCTAATTTAAAAACTAACCCCTGGATTTGTAATTTAAGTGGGATATTTTCCTCCTCAATGGCTAACATGTAATCATGCATGTAGCTGTCTTGGCCTTGGGATTATTTGGTGTTGGAAAATGTGGCGTTTGTTCCAGTTACTGCTAACATGTAATCACCCCATTTGTGATTGATCTGCCAAACTGCTCTTGGAATTAGATGTGTCACTCTATGTGGATATATATCACCATTATGGTGGTTGCGACAGTTCTTAATCAATTGAGTTAGTCAGATGACTCAGATAACAAGCAGAATGGACAATTAAAAAACGCAAATGGGGTGTCTACTTTGTTAGTTCAAAATTTGAATTTTAGGATTTGTTGATTTGGTCATATGACTGGTCTGGGCGTTGCCTTAAACATGGGGGTGGGCTTATTAGATTTTTTTCCTTGGGTCGGTAAATGATTTACATTTCTTGCGGTTTCTGGAAGTTAATCTTTGTAGTGGGTATTGCTTCCTCTATTTACCAACATTTATTATTATATTTTTTTAAATGTAATTGCGTTTTTTCTCTCTTAGGTTACATGGGATGAAACTGATGCTCTGCTGAGTGCAAAGGGTGTGAACCCTTGGGAAGTTGAATTTGCTACAGCCGCTGCTCCAGTACAACCTACAGTTCATCAAGCAAAGAAATTTAGAGGTCTCCAGAAATCTGGGCAGCTGACTGGTGAAGAAGAGCTGTTTTCACCTATGATGAGATTTGGTGATTCATCAACAATGGAGCAATTCAACCAATCATTATTGAGTTTCAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAATTTATTCTGTGAATCTAGGTTATCCAATTCATATAAAGAAATTACTTCACTAACCTGTGATGACAATTCCATGTGCAAGATGAATGTGGTGCCCAAGAAGCAGATGGTGTCTACTGACCTCCTTATTGGTAGTGTGCAGTCTGATACCCTATCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTCGCTGCAGAAGCTACTGAGAATCAGTGCTGCAACTCAACTAAATCTGGAGTACGTTCATTCCAGTTGTTTGGTCAAGTCATCTATACGAATCTGCCTGCCGAAAATGGGCTTAACAGTGGTGTTAGCACTAATGATGGTGACAAGAATCCTAATCAGTCCACT

mRNA sequence

AGGATGGACCCGAAACTCTGGCGTGCTTTTGCGGGTAATTCTGTCCAAATTCACACTGTAGGCTCTCAGGTTTACTATTTCACTCAAGGGCATGTGGAGCAGTCTTCTTCCGCTCCATGCCTTTCCAGGTCTGTTCTCTCCAATCCGGCTACTAAATGTCTCGTCACTGCTGCTCACTTCAATGCGGATCCTCTTACTGATGAGGTCTGCATCAAGTTGAATCTTCATCCCTTTGGACATGGCGGGGAGGTGCCTGTTCTGCCTCTTGCGGGCTCTGATGATAATAGCGGGGAGGGAGATAGAGTTGTATCGTTTGCTAAGATTCTCACGTCTTCTGATGCTAATAACGGCGGTGGGTTCTCTGTGCCGCGGTTCTGTGCCGACTCTATTTTTCCTCCGTTGAATTACCTGGCGGATCCGCCGGTGCAGACTTTGTCGATTACTGATGTTCATGGAGTTGTTTGGAATTTTCGCCATATTTTCCGTGGGACGCCGAGGCGGCATTTGCTCACTACCGGATGGAGTAAGTTCGTGAATAATAAGAAGCTGGTTGCGGGAGATTCTGTCGTTTTCGCGAAGAATTCTAGAGGGGACATGTTCGTTGGTATTCGTCGCGCTACAAAGGGTAATACAGGCGGTGATTGCGGCAGATGGCATAGCCAGATTGGTGGAGTGAGATACAGTGCGGAGGAGAACCGTTCAGGAGAAGGAGGAAGAGAAGTCTTCTCTCGGAATGGTATTGGGAAGCTGCCGGCCGAGGCGGTTGCCAATGCTGCGGAATTGGCAGCGCAATTTAGGCCATTCGAGGTGGTTTATTATCCTAGGGCTGGTTGGTCGGAATTTGTAGTTAAAGCCGAGACGGTGGACAAGGCGCTGAGTTATTATTGGTCGTCTGGATTAAGAGTGAAAATGGCCGTAGACACGGAGGATTCGTCGAAGACGACATGGTATCAGGGGACTGTAACTTCAGTTTCTATCCCTGAACACGGACCTTGGAGGAATTCCCCATGGCGTATGCTGCAGGTTACATGGGATGAAACTGATGCTCTGCTGAGTGCAAAGGGTGTGAACCCTTGGGAAGTTGAATTTGCTACAGCCGCTGCTCCAGTACAACCTACAGTTCATCAAGCAAAGAAATTTAGAGGTCTCCAGAAATCTGGGCAGCTGACTGGTGAAGAAGAGCTGTTTTCACCTATGATGAGATTTGGTGATTCATCAACAATGGAGCAATTCAACCAATCATTATTGAGTTTCAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAATTTATTCTGTGAATCTAGGTTATCCAATTCATATAAAGAAATTACTTCACTAACCTGTGATGACAATTCCATGTGCAAGATGAATGTGGTGCCCAAGAAGCAGATGGTGTCTACTGACCTCCTTATTGGTAGTGTGCAGTCTGATACCCTATCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTCGCTGCAGAAGCTACTGAGAATCAGTGCTGCAACTCAACTAAATCTGGAGTACGTTCATTCCAGTTGTTTGGTCAAGTCATCTATACGAATCTGCCTGCCGAAAATGGGCTTAACAGTGGTGTTAGCACTAATGATGGTGACAAGAATCCTAATCAGTCCACT

Coding sequence (CDS)

AGGATGGACCCGAAACTCTGGCGTGCTTTTGCGGGTAATTCTGTCCAAATTCACACTGTAGGCTCTCAGGTTTACTATTTCACTCAAGGGCATGTGGAGCAGTCTTCTTCCGCTCCATGCCTTTCCAGGTCTGTTCTCTCCAATCCGGCTACTAAATGTCTCGTCACTGCTGCTCACTTCAATGCGGATCCTCTTACTGATGAGGTCTGCATCAAGTTGAATCTTCATCCCTTTGGACATGGCGGGGAGGTGCCTGTTCTGCCTCTTGCGGGCTCTGATGATAATAGCGGGGAGGGAGATAGAGTTGTATCGTTTGCTAAGATTCTCACGTCTTCTGATGCTAATAACGGCGGTGGGTTCTCTGTGCCGCGGTTCTGTGCCGACTCTATTTTTCCTCCGTTGAATTACCTGGCGGATCCGCCGGTGCAGACTTTGTCGATTACTGATGTTCATGGAGTTGTTTGGAATTTTCGCCATATTTTCCGTGGGACGCCGAGGCGGCATTTGCTCACTACCGGATGGAGTAAGTTCGTGAATAATAAGAAGCTGGTTGCGGGAGATTCTGTCGTTTTCGCGAAGAATTCTAGAGGGGACATGTTCGTTGGTATTCGTCGCGCTACAAAGGGTAATACAGGCGGTGATTGCGGCAGATGGCATAGCCAGATTGGTGGAGTGAGATACAGTGCGGAGGAGAACCGTTCAGGAGAAGGAGGAAGAGAAGTCTTCTCTCGGAATGGTATTGGGAAGCTGCCGGCCGAGGCGGTTGCCAATGCTGCGGAATTGGCAGCGCAATTTAGGCCATTCGAGGTGGTTTATTATCCTAGGGCTGGTTGGTCGGAATTTGTAGTTAAAGCCGAGACGGTGGACAAGGCGCTGAGTTATTATTGGTCGTCTGGATTAAGAGTGAAAATGGCCGTAGACACGGAGGATTCGTCGAAGACGACATGGTATCAGGGGACTGTAACTTCAGTTTCTATCCCTGAACACGGACCTTGGAGGAATTCCCCATGGCGTATGCTGCAGGTTACATGGGATGAAACTGATGCTCTGCTGAGTGCAAAGGGTGTGAACCCTTGGGAAGTTGAATTTGCTACAGCCGCTGCTCCAGTACAACCTACAGTTCATCAAGCAAAGAAATTTAGAGGTCTCCAGAAATCTGGGCAGCTGACTGGTGAAGAAGAGCTGTTTTCACCTATGATGAGATTTGGTGATTCATCAACAATGGAGCAATTCAACCAATCATTATTGAGTTTCAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAATTTATTCTGTGAATCTAGGTTATCCAATTCATATAAAGAAATTACTTCACTAACCTGTGATGACAATTCCATGTGCAAGATGAATGTGGTGCCCAAGAAGCAGATGGTGTCTACTGACCTCCTTATTGGTAGTGTGCAGTCTGATACCCTATCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTCGCTGCAGAAGCTACTGAGAATCAGTGCTGCAACTCAACTAAATCTGGAGTACGTTCATTCCAGTTGTTTGGTCAAGTCATCTATACGAATCTGCCTGCCGAAAATGGGCTTAACAGTGGTGTTAGCACTAATGATGGTGACAAGAATCCTAATCAGTCCACT

Protein sequence

RMDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFNADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGGFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSLLSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQSDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDGDKNPNQST

Homology

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BLAST of MS001065 vs. NCBI nr
Match: XP_022132271.1 (auxin response factor 17 [Momordica charantia])

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 543/545 (99.63%), Postives = 544/545 (99.82%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN
Sbjct: 1   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 60

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGGFS 121
           ADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDN GEGDRVVSFAKILTSSDANNGGGFS
Sbjct: 61  ADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNGGEGDRVVSFAKILTSSDANNGGGFS 120

Query: 122 VPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNK 181
           VPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNK
Sbjct: 121 VPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNK 180

Query: 182 KLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREV 241
           KLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREV
Sbjct: 181 KLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREV 240

Query: 242 FSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLR 301
           FSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLR
Sbjct: 241 FSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLR 300

Query: 302 VKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEV 361
           VKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEV
Sbjct: 301 VKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEV 360

Query: 362 EFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSLLSFNSF 421
           EFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSST+EQFNQSLLSFNSF
Sbjct: 361 EFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTVEQFNQSLLSFNSF 420

Query: 422 PAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQSDTL 481
           PAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQSDTL
Sbjct: 421 PAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQSDTL 480

Query: 482 SPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDGDKN 541
           SPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDGDKN
Sbjct: 481 SPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDGDKN 540

Query: 542 PNQST 547
           PNQST
Sbjct: 541 PNQST 545

[Close]

BLAST of MS001065 vs. NCBI nr
Match: XP_022951562.1 (auxin response factor 17-like isoform X1 [Cucurbita moschata] >XP_022951563.1 auxin response factor 17-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 796.2 bits (2055), Expect = 1.8e-226
Identity = 406/551 (73.68%), Postives = 447/551 (81.13%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MD +LW+AFAG SV IHTVGS+VYYF QGHVEQ++  P LS+SV SNPATKCLVT   F+
Sbjct: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60

Query: 62  ADPLTDEVCIKLNLHPF--GHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           AD L+DEVCIKLNLHP   G    V V      DDN GE D++ SFAKILTSSDANNGGG
Sbjct: 61  ADSLSDEVCIKLNLHPIRPGRDESVVVSRFGRCDDNGGERDKIESFAKILTSSDANNGGG 120

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR CADS+FPPLNY ADPPVQ LSITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 121 FSVPRCCADSVFPPLNYQADPPVQNLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRA----TKGNTGGDCGRWHSQIGGVRYSAEENRSG 241
           +KKL+AGDSVVFAKN RGDMFVGIRRA    T+   GGDCGRW+SQ GG R S EEN SG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGGDCGRWNSQNGGARCSLEENCSG 240

Query: 242 EGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYY 301
           +GG +VFSR  IGKLPAEAVANAAELAAQF+PFE+VYYPRAG SEFVV+ E V+++ +Y 
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300

Query: 302 WSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKG 361
           W SG RVKMA++TE  SK TWYQGTVTS S+PEHGPW  SPWRML+VTWDE D L SAK 
Sbjct: 301 WYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKY 360

Query: 362 VNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSL 421
           V+PWEVE AT   P+QP +H AKKFRGL KSG L GE ELFSP+M F D STMEQFN SL
Sbjct: 361 VSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVD-STMEQFNPSL 420

Query: 422 LSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGS 481
           L+ NSFPAGMQGARQ LFCESRL N  KE+T LTCD++SM ++N   K QMVSTDLLIGS
Sbjct: 421 LNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLLIGS 480

Query: 482 VQSDTLSPDSQASVLSFAAEATENQ-CCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVS 541
           VQ DTLSPDSQASVLSFA    ENQ CCNS K+GV S QLFGQVIY N P ENGL +GVS
Sbjct: 481 VQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENGLENGVS 540

Query: 542 TNDGDKNPNQS 546
           TNDG KNPNQS
Sbjct: 541 TNDGGKNPNQS 549

[Close]

BLAST of MS001065 vs. NCBI nr
Match: XP_023536672.1 (auxin response factor 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 793.9 bits (2049), Expect = 8.8e-226
Identity = 407/551 (73.87%), Postives = 448/551 (81.31%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MD +LW+AFAG SV IHTVGS+VYYF QGHVEQ++  P LS+SVLSNPATKCLVT   F+
Sbjct: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVLSNPATKCLVTGTDFH 60

Query: 62  ADPLTDEVCIKLNLHPF--GHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           AD L+DEVCIKLNLHP   G    V V      DDN GE D++ SFAKILTSSDANNGGG
Sbjct: 61  ADSLSDEVCIKLNLHPIRPGRDESVVVSRFGRCDDNGGERDKIESFAKILTSSDANNGGG 120

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR CADS+FPPLNY ADPPVQTLSITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 121 FSVPRCCADSVFPPLNYQADPPVQTLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRA----TKGNTGGDCGRWHSQIGGVRYSAEENRSG 241
           +KKL+AGDSVVFAKN RGDMFVGIRRA    T+  +GGDCGRW+SQ GG R S EEN SG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAISGGDCGRWNSQNGGARCSLEENCSG 240

Query: 242 EGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYY 301
           +GG +VFSR  IGKLPAEAVANAAELAAQF+PFE+VYYPRAG SEFVV+ E V+K+ +Y 
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNKSKNYQ 300

Query: 302 WSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKG 361
           W SG RVKMA++TE  SK TWYQGTVTS S+PEHGPW  SPWRML+VTWDE DAL SAK 
Sbjct: 301 WYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDALQSAKY 360

Query: 362 VNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSL 421
           V+PWEVE AT   P+QP +H AKKFRGL KSG L GE ELFSP+M F D STMEQFN SL
Sbjct: 361 VSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVD-STMEQFNPSL 420

Query: 422 LSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGS 481
           L+ NSFPAGMQGARQ LFCESRL N  KE+T LTCD++SM ++N     QMVSTDLLIGS
Sbjct: 421 LNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKTMQMVSTDLLIGS 480

Query: 482 VQSDTLSPDSQASVLSFAAEATENQ-CCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVS 541
           VQ DTLS DSQASVLSFA    ENQ CCNS K+GV S QLFGQVIY N P ENGL +GVS
Sbjct: 481 VQFDTLSSDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENGLENGVS 540

Query: 542 TNDGDKNPNQS 546
           TNDG KN NQS
Sbjct: 541 TNDGGKNLNQS 549

[Close]

BLAST of MS001065 vs. NCBI nr
Match: XP_038886591.1 (auxin response factor 17 [Benincasa hispida])

HSP 1 Score: 782.7 bits (2020), Expect = 2.0e-222
Identity = 396/549 (72.13%), Postives = 443/549 (80.69%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MDP LWRAFAG S  IHTVGS+VYYF QGHVEQ++  P LSRSVLSNP TKC+V+AA +N
Sbjct: 3   MDPNLWRAFAGYSAHIHTVGSEVYYFVQGHVEQATYVPTLSRSVLSNPITKCIVSAADYN 62

Query: 62  ADPLTDEVCIKLNLHPF--GHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           AD L+DEVC+KLNL+P   G  G   V     SDD SG  + +  FAKILTSSDANNGGG
Sbjct: 63  ADSLSDEVCLKLNLNPIRPGESGSEVVSGFNCSDDGSGNRNTIEKFAKILTSSDANNGGG 122

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR+CADSIFPPLNY  +PPVQTLSITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 123 FSVPRYCADSIFPPLNYKVEPPVQTLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 182

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRAT--KGNTGGDCGRWHSQIGGVRYSAEENRSGEG 241
           +KKLVAGD+V+FAKNS GDMFVGIRRAT  +   GGDC RW+SQIGG RY+ EE RSG+G
Sbjct: 183 HKKLVAGDAVIFAKNSSGDMFVGIRRATPSRAIVGGDCSRWNSQIGGGRYNVEEKRSGDG 242

Query: 242 GREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWS 301
           G EVFSR+ IGK+PAEAVANAAELA QF+PFEVVYYPRAG SEFVV AE V+ +++Y W 
Sbjct: 243 GSEVFSRSNIGKVPAEAVANAAELATQFKPFEVVYYPRAGLSEFVVPAEKVNNSMNYQWY 302

Query: 302 SGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVN 361
           SGLRVKM ++TEDS K  WYQGTVTS SIP HGPW  SPWRML+VTW+ETDAL SAK V+
Sbjct: 303 SGLRVKMPLETEDSLKMQWYQGTVTSASIPAHGPWMGSPWRMLEVTWEETDALQSAKYVS 362

Query: 362 PWEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSLLS 421
           PWEVE AT   P+ P +H AKKFRG QKS  + GE +LFSP+M FGD STM QFNQSLLS
Sbjct: 363 PWEVELATPTPPI-PPLHPAKKFRGPQKSAVVNGEADLFSPLMTFGD-STMGQFNQSLLS 422

Query: 422 FNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQ 481
           FNSFPAGMQGARQN FCES L N Y EIT  TCD+ S CK+N  PK Q VSTDL IGSVQ
Sbjct: 423 FNSFPAGMQGARQNFFCESGLFNPYNEITPPTCDEISTCKLNAAPKTQTVSTDLQIGSVQ 482

Query: 482 SDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTND 541
           SDTLSPDSQASVLSFA    ENQ CNSTK+GV S QLFGQ+IYTN P +NG + G + +D
Sbjct: 483 SDTLSPDSQASVLSFATGTAENQTCNSTKAGVYSIQLFGQIIYTNPPVQNG-HHGANNDD 542

Query: 542 GDKNPNQST 547
           GDK   QS+
Sbjct: 543 GDKKRKQSS 548

[Close]

BLAST of MS001065 vs. NCBI nr
Match: XP_023001892.1 (auxin response factor 17-like [Cucurbita maxima])

HSP 1 Score: 771.5 bits (1991), Expect = 4.7e-219
Identity = 401/551 (72.78%), Postives = 445/551 (80.76%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           M+ +LW+AFAG SV  HTVGS+VYYF QGHVEQ++  P LS+SVLSNPATKCLVT+  F+
Sbjct: 1   MNRQLWQAFAGKSVHTHTVGSEVYYFVQGHVEQATYIPSLSQSVLSNPATKCLVTSTDFH 60

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVPVL--PLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           AD L+DEVCIKLNLHP   G +  VL       DDN GE +++ SFAKILTSSDANNGGG
Sbjct: 61  ADSLSDEVCIKLNLHPIRSGQDESVLVSRFGRCDDNGGERNKIESFAKILTSSDANNGGG 120

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR CADS+FPPLNY ADPPVQTLSITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 121 FSVPRCCADSVFPPLNYRADPPVQTLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRA----TKGNTGGDCGRWHSQIGGVRYSAEENRSG 241
           +KKL+AGDSVVFAKN RGDMFVGIRRA    T+   GG  GRW+SQ GG R S E+N SG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGG--GRWNSQNGGARCSLEKNCSG 240

Query: 242 EGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYY 301
           +GG +VFSR  IGKLPAEAVANAAELAAQF+PFE+VYYPRAG SEFVV+ E V+++ +Y 
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300

Query: 302 WSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKG 361
           W SG RVKMA++TE  SK TWYQGTVTS S+PEHGPW  SPWRML+VTWDE DAL SAK 
Sbjct: 301 WYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDALQSAKY 360

Query: 362 VNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSL 421
           V+PWEVE AT   P+QP +H AKKFRGL KSG L GE ELFSP+M F D STMEQFN SL
Sbjct: 361 VSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVD-STMEQFNPSL 420

Query: 422 LSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGS 481
           L+ NSFPA MQGARQ LFCESRL N  KEITSLTCD++SM ++N     QMVSTDLLIGS
Sbjct: 421 LNLNSFPACMQGARQKLFCESRLFNPCKEITSLTCDESSMSELNAAKTMQMVSTDLLIGS 480

Query: 482 VQSDTLSPDSQASVLSFAAEATENQ-CCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVS 541
           VQ DTLSPDSQASVLSFA    ENQ CCNS K+GV S QLFGQVIY N P EN    GVS
Sbjct: 481 VQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVEN----GVS 540

Query: 542 TNDGDKNPNQS 546
           TNDG KNPNQS
Sbjct: 541 TNDGGKNPNQS 543

[Close]

BLAST of MS001065 vs. ExPASy Swiss-Prot
Match: Q84WU6 (Auxin response factor 17 OS=Arabidopsis thaliana OX=3702 GN=ARF17 PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 3.4e-119
Identity = 253/556 (45.50%), Postives = 340/556 (61.15%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           +DP +WRA AG SVQI  + S+VYYF QGHVE     P LS    S     C++T+    
Sbjct: 16  VDPTIWRACAGASVQIPVLHSRVYYFPQGHVEH--CCPLLSTLPSSTSPVPCIITSIQLL 75

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVPV--LPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           ADP+TDEV   L L P       P         D +  + ++V +FAKILT SDANNGGG
Sbjct: 76  ADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNGGG 135

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPRFCADS+FP LN+  DPPVQ L +TD+HG VW+FRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 136 FSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVN 195

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSG---- 241
           +KKL+AGDSVVF + S  +MF+G+RR    ++ G      S  GG  Y+   ++S     
Sbjct: 196 SKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGG----SSYYGGDEYNGYYSQSSVAKE 255

Query: 242 -EGG-REVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALS 301
            +G  ++ F R+G GKL AEAV +A   A+Q  PFEVV+YP AGWSEFVV+AE V+ ++S
Sbjct: 256 DDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMS 315

Query: 302 YYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSA 361
            YW+ G RVKMA++TEDSS+ TW+QG V+S +  E GPWR SPW+ LQ+TWDE + L + 
Sbjct: 316 MYWTPGTRVKMAMETEDSSRITWFQGIVSS-TYQETGPWRGSPWKQLQITWDEPEILQNV 375

Query: 362 KGVNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQ-LTGEE-ELFSPMMRFGDSSTMEQF 421
           K VNPW+VE A  A  +      AK+ +  Q  G  L+G++ E+  P      ++  +  
Sbjct: 376 KRVNPWQVEIAAHATQLHTPFPPAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDP- 435

Query: 422 NQSLLSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDL 481
           + S+ S+++FPAGMQGARQ  F     +            +N    ++ +P    VST++
Sbjct: 436 SPSMFSYSTFPAGMQGARQYDFGSFNPTGFIGGNPPQLFTNNF---LSPLPDLGKVSTEM 495

Query: 482 L-IGSVQSDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENG-L 541
           +  GS  SD LSP+S  + LS   +   N+   S K  V S QLFG++I     +E+G  
Sbjct: 496 MNFGSPPSDNLSPNSNTTNLSSGNDLVGNRGPLSKK--VNSIQLFGKIITVEEHSESGPA 555

Query: 542 NSGVSTNDGDKNPNQS 546
            SG+   DG K  + +
Sbjct: 556 ESGLCEEDGSKESSDN 558

[Close]

BLAST of MS001065 vs. ExPASy Swiss-Prot
Match: Q9AV47 (Auxin response factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF22 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 8.4e-94
Identity = 224/570 (39.30%), Postives = 305/570 (53.51%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLS------NPATKCLV 61
           +DP+LW A AG  VQ+    S+VYYF QGH E +      + +          P   C V
Sbjct: 13  LDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRV 72

Query: 62  TAAHFNADPLTDEVCIKLNLHPFGHGGEV-----PVLPL-AGSDDNSGEGDRVVSFAKIL 121
               F AD  +DEV  K+ L P   G         + PL A  D      ++  SFAK L
Sbjct: 73  EGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTL 132

Query: 122 TSSDANNGGGFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHL 181
           T SDANNGGGFSVPR+CA++IFP L+Y ADPPVQT+   DVHGVVW FRHI+RGTPRRHL
Sbjct: 133 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHL 192

Query: 182 LTTGWSKFVNNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGG-DC-GRWHSQ-IGGVR 241
           LTTGWS FVN KKLVAGDS+VF +   G++ VGIRRA +   GG +C   W++   GG  
Sbjct: 193 LTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGG 252

Query: 242 YSA----EENRSGEGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFV 301
           +SA    EE++  +G        G GK+    V  AA LA+  +PFEV YYPRA   +FV
Sbjct: 253 FSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFV 312

Query: 302 VKAETVDKALSYYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQV 361
           VKA +V  A+   W SG+R KMA +TEDSS+ +W+ GT++SV + +   W NSPWR+LQV
Sbjct: 313 VKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQV 372

Query: 362 TWDETDALLSAKGVNPWEVEFATAAAPVQ--PTVHQAKKFRGLQKSGQLTGEEELFSPMM 421
           TWDE D L + K V+PW VE  ++  P+   P     KK R +        E  L +P+ 
Sbjct: 373 TWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLR-VPPHPDFPFEGHLLNPIF 432

Query: 422 RFGDSSTMEQFNQSLLSF-NSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMN 481
                + +   N  L  + ++ PAG+QGAR   F      +   ++        S  +++
Sbjct: 433 H---GNPLGPSNSPLCCYPDTAPAGIQGARHAQFGLPLTDHQLNKLHLGLLHSGSFNRLD 492

Query: 482 VVPKKQMVSTDLLIGSVQSDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVI 541
            +     +S     G V S   + D+ + +LS +      +  +  +       LFG+ I
Sbjct: 493 AITPPSRISK----GFVVSSAPAHDNISCLLSISTPQVAEK--SDDRKTTPHIMLFGKAI 552

Query: 542 YTNLPAENGLNSGVSTN------DGDKNPN 544
           +T    E  + S  ST        G+ +PN
Sbjct: 553 FT----EQQITSSGSTETLSPGVTGNSSPN 568

[Close]

BLAST of MS001065 vs. ExPASy Swiss-Prot
Match: Q9SKN5 (Auxin response factor 10 OS=Arabidopsis thaliana OX=3702 GN=ARF10 PE=1 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 9.2e-93
Identity = 202/451 (44.79%), Postives = 261/451 (57.87%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           +DP+LW A AG+ VQI ++ S V+YF QGH E + + P      +  P   C V +  F 
Sbjct: 7   LDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVP-PLILCRVVSVKFL 66

Query: 62  ADPLTDEVCIKLNLHPFG------HGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDAN 121
           AD  TDEV  K+ L P            V  L    SD N    ++  SFAK LT SDAN
Sbjct: 67  ADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDAN 126

Query: 122 NGGGFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWS 181
           NGGGFSVPR+CA++IFP L+Y A+PPVQT+   D+HG  W FRHI+RGTPRRHLLTTGWS
Sbjct: 127 NGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWS 186

Query: 182 KFVNNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRY-SAEENRS 241
            FVN KKL+AGDS+VF ++  GD+ VGIRRA +G  G + G  +   G   +   +E+ +
Sbjct: 187 TFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDESTT 246

Query: 242 GEGGREVFSRNG--------IGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAE 301
                 +  RNG         G++  EAVA A   AA  + FEVVYYPRA   EF VKA 
Sbjct: 247 TTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAA 306

Query: 302 TVDKALSYYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDE 361
            V  A+   W SG+R KMA +TEDSS+ +W+ GTV++V + +   W NSPWR+LQV WDE
Sbjct: 307 DVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDE 366

Query: 362 TDALLSAKGVNPWEVEFATAAAPVQPTVHQA-----KKFRGLQK-SGQLTGEE-ELFSPM 421
            D L + K V+PW VE  +      PT+H +     KK R  Q       G +  +FSP 
Sbjct: 367 PDLLQNVKRVSPWLVELVSN----MPTIHLSPFSPRKKIRIPQPFEFPFHGTKFPIFSP- 426

Query: 422 MRFGDSSTMEQFNQSLLSFNSFPAGMQGARQ 431
             F ++   E         N+ PAG+QGARQ
Sbjct: 427 -GFANNGGGESMCYLSNDNNNAPAGIQGARQ 450

[Close]

BLAST of MS001065 vs. ExPASy Swiss-Prot
Match: Q93YR9 (Auxin response factor 16 OS=Arabidopsis thaliana OX=3702 GN=ARF16 PE=1 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.1e-92
Identity = 226/536 (42.16%), Postives = 289/536 (53.92%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLS-NPATKCLVTAAHF 61
           +DP+LW A AG  V++  + S+V+YF QGH E  ++  C+    L   P   C V A  +
Sbjct: 16  LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAE--NAYDCVDFGNLPIPPMVLCRVLAIKY 75

Query: 62  NADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNSGE--GDRVVSFAKILTSSDANNGG 121
            AD  +DEV  KL L P      V      G D N  E   ++  SFAK LT SDANNGG
Sbjct: 76  MADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNGG 135

Query: 122 GFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFV 181
           GFSVPR+CA++IFP L+Y A+PPVQT+   DVHG VW FRHI+RGTPRRHLLTTGWS FV
Sbjct: 136 GFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFV 195

Query: 182 NNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGD---CGRWHSQIGGVRYSA--EENR 241
           N KKLVAGDS+VF +   GD+ VGIRRA +G  G        W+   G   YS+   E+ 
Sbjct: 196 NQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLREDE 255

Query: 242 SGEGGREVFS-RNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKAL 301
           S    R   S  +  GK+ AE+V  AA LA   RPFEVVYYPRA  SEF VKA     A+
Sbjct: 256 SNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAAM 315

Query: 302 SYYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLS 361
              W SG+R KMA +TEDSS+ +W+ GTV++V++ +   W NSPWR+LQV WDE D L +
Sbjct: 316 RIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQN 375

Query: 362 AKGVNPWEVEFATAAAPVQPTVHQ--AKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQ 421
            K VNPW VE  +   P+  T      KK R  Q          +  P+  F  +  +  
Sbjct: 376 VKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSI--PVPSFPSNPLIRS 435

Query: 422 FNQSLLSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTD 481
              S +  ++ P G+QGAR N      LS+S          D     +N  P     S+ 
Sbjct: 436 SPLSSV-LDNVPVGLQGARHNAHQYYGLSSS----------DLHHYYLNRPPPPPPPSSL 495

Query: 482 LLIGSVQSDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAE 527
            L  S+    +   ++          T    CN TKS      LFG++I   LP E
Sbjct: 496 QLSPSLGLRNIDTKNEKGFCFLTMGTTP---CNDTKSKKSHIVLFGKLI---LPEE 530

[Close]

BLAST of MS001065 vs. ExPASy Swiss-Prot
Match: Q01I35 (Auxin response factor 10 OS=Oryza sativa subsp. indica OX=39946 GN=ARF10 PE=3 SV=2)

HSP 1 Score: 339.3 bits (869), Expect = 7.8e-92
Identity = 227/569 (39.89%), Postives = 300/569 (52.72%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           +D +LW A AG+   +  VG+ VYYF QGH EQ+S+A  LS S    P   C V A  F 
Sbjct: 19  VDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLS-SARVPPLVPCRVVAVRFM 78

Query: 62  ADPLTDEVCIKLNLHPFGHG------GEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDAN 121
           AD  +DEV  K+ L P   G      GE         ++NS    R  SFAK LT SDAN
Sbjct: 79  ADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENS--RPRPTSFAKTLTQSDAN 138

Query: 122 NGGGFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWS 181
           NGGGFSVPRFCA++IFP L+Y ++PPVQ++   DVHGV W FRHI+RGTPRRHLLTTGWS
Sbjct: 139 NGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 198

Query: 182 KFVNNKKLVAGDSVVFAKNSRGDMFVGIRRATKG--NTGGDCGRWHSQIGGVRYSAEENR 241
            FVN K+L AGDS+VF ++  G++ VG+RRA +G  + GGD     S  G  +Y     R
Sbjct: 199 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 258

Query: 242 SGEGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALS 301
           +             GK+P E V  AA  A   +PFEV+YYPRA   EF V+A  V  A++
Sbjct: 259 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCVRAAAVRTAMA 318

Query: 302 YYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSA 361
             W  G+R KMA +TEDSS+ +W+ GTV  V   +   W  SPWR+LQVTWDE + L + 
Sbjct: 319 VQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQNV 378

Query: 362 KGVNPWEVEFATAAAPVQ-PTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFN 421
           K V PW VE  ++   +  P+    +K        +L  E ++F+  +   +    +  +
Sbjct: 379 KRVCPWLVELVSSMPNLHLPSFSPPRKKPRNPPYAELPLEGQIFTGPVFPPNPMAHDHHH 438

Query: 422 QSLLSFNSF------PAGMQGARQNLFC----ESRLSNSYKEI---TSLTCDDNSMCKMN 481
                F  F      PAG+QGAR   F     E  + N    +     +           
Sbjct: 439 HHGFPFLPFPDSSAQPAGIQGARHAQFASPFPEFHIGNLQPNLMLYAGIRLPPADRAAPA 498

Query: 482 VVPKKQMVSTDLLIGSVQSDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVI 541
             P + ++STDL IGS       PD  A      + ++  +  + TK   R F LFGQ I
Sbjct: 499 PRPPRIIISTDLTIGSPG----KPDDAA-----CSPSSGGKKIDDTKP--RGFLLFGQAI 558

Query: 542 YTNLPAENGLNSG--VSTN-DGDKNPNQS 546
            T    +NG + G   S N D +K PN S
Sbjct: 559 LTEEQIKNGNSDGRPASPNWDAEKAPNTS 573

[Close]

BLAST of MS001065 vs. ExPASy TrEMBL
Match: A0A6J1BRS8 (Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111005166 PE=3 SV=1)

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 543/545 (99.63%), Postives = 544/545 (99.82%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN
Sbjct: 1   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 60

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGGFS 121
           ADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDN GEGDRVVSFAKILTSSDANNGGGFS
Sbjct: 61  ADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNGGEGDRVVSFAKILTSSDANNGGGFS 120

Query: 122 VPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNK 181
           VPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNK
Sbjct: 121 VPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNK 180

Query: 182 KLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREV 241
           KLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREV
Sbjct: 181 KLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREV 240

Query: 242 FSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLR 301
           FSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLR
Sbjct: 241 FSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLR 300

Query: 302 VKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEV 361
           VKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEV
Sbjct: 301 VKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEV 360

Query: 362 EFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSLLSFNSF 421
           EFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSST+EQFNQSLLSFNSF
Sbjct: 361 EFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTVEQFNQSLLSFNSF 420

Query: 422 PAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQSDTL 481
           PAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQSDTL
Sbjct: 421 PAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQSDTL 480

Query: 482 SPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDGDKN 541
           SPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDGDKN
Sbjct: 481 SPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDGDKN 540

Query: 542 PNQST 547
           PNQST
Sbjct: 541 PNQST 545

[Close]

BLAST of MS001065 vs. ExPASy TrEMBL
Match: A0A6J1GI16 (Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111454341 PE=3 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 8.6e-227
Identity = 406/551 (73.68%), Postives = 447/551 (81.13%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MD +LW+AFAG SV IHTVGS+VYYF QGHVEQ++  P LS+SV SNPATKCLVT   F+
Sbjct: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60

Query: 62  ADPLTDEVCIKLNLHPF--GHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           AD L+DEVCIKLNLHP   G    V V      DDN GE D++ SFAKILTSSDANNGGG
Sbjct: 61  ADSLSDEVCIKLNLHPIRPGRDESVVVSRFGRCDDNGGERDKIESFAKILTSSDANNGGG 120

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR CADS+FPPLNY ADPPVQ LSITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 121 FSVPRCCADSVFPPLNYQADPPVQNLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRA----TKGNTGGDCGRWHSQIGGVRYSAEENRSG 241
           +KKL+AGDSVVFAKN RGDMFVGIRRA    T+   GGDCGRW+SQ GG R S EEN SG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGGDCGRWNSQNGGARCSLEENCSG 240

Query: 242 EGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYY 301
           +GG +VFSR  IGKLPAEAVANAAELAAQF+PFE+VYYPRAG SEFVV+ E V+++ +Y 
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300

Query: 302 WSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKG 361
           W SG RVKMA++TE  SK TWYQGTVTS S+PEHGPW  SPWRML+VTWDE D L SAK 
Sbjct: 301 WYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKY 360

Query: 362 VNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSL 421
           V+PWEVE AT   P+QP +H AKKFRGL KSG L GE ELFSP+M F D STMEQFN SL
Sbjct: 361 VSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVD-STMEQFNPSL 420

Query: 422 LSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGS 481
           L+ NSFPAGMQGARQ LFCESRL N  KE+T LTCD++SM ++N   K QMVSTDLLIGS
Sbjct: 421 LNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLLIGS 480

Query: 482 VQSDTLSPDSQASVLSFAAEATENQ-CCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVS 541
           VQ DTLSPDSQASVLSFA    ENQ CCNS K+GV S QLFGQVIY N P ENGL +GVS
Sbjct: 481 VQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENGLENGVS 540

Query: 542 TNDGDKNPNQS 546
           TNDG KNPNQS
Sbjct: 541 TNDGGKNPNQS 549

[Close]

BLAST of MS001065 vs. ExPASy TrEMBL
Match: A0A6J1KHW7 (Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111495939 PE=3 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 2.3e-219
Identity = 401/551 (72.78%), Postives = 445/551 (80.76%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           M+ +LW+AFAG SV  HTVGS+VYYF QGHVEQ++  P LS+SVLSNPATKCLVT+  F+
Sbjct: 1   MNRQLWQAFAGKSVHTHTVGSEVYYFVQGHVEQATYIPSLSQSVLSNPATKCLVTSTDFH 60

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVPVL--PLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           AD L+DEVCIKLNLHP   G +  VL       DDN GE +++ SFAKILTSSDANNGGG
Sbjct: 61  ADSLSDEVCIKLNLHPIRSGQDESVLVSRFGRCDDNGGERNKIESFAKILTSSDANNGGG 120

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR CADS+FPPLNY ADPPVQTLSITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 121 FSVPRCCADSVFPPLNYRADPPVQTLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRA----TKGNTGGDCGRWHSQIGGVRYSAEENRSG 241
           +KKL+AGDSVVFAKN RGDMFVGIRRA    T+   GG  GRW+SQ GG R S E+N SG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGG--GRWNSQNGGARCSLEKNCSG 240

Query: 242 EGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYY 301
           +GG +VFSR  IGKLPAEAVANAAELAAQF+PFE+VYYPRAG SEFVV+ E V+++ +Y 
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300

Query: 302 WSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKG 361
           W SG RVKMA++TE  SK TWYQGTVTS S+PEHGPW  SPWRML+VTWDE DAL SAK 
Sbjct: 301 WYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDALQSAKY 360

Query: 362 VNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSL 421
           V+PWEVE AT   P+QP +H AKKFRGL KSG L GE ELFSP+M F D STMEQFN SL
Sbjct: 361 VSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVD-STMEQFNPSL 420

Query: 422 LSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGS 481
           L+ NSFPA MQGARQ LFCESRL N  KEITSLTCD++SM ++N     QMVSTDLLIGS
Sbjct: 421 LNLNSFPACMQGARQKLFCESRLFNPCKEITSLTCDESSMSELNAAKTMQMVSTDLLIGS 480

Query: 482 VQSDTLSPDSQASVLSFAAEATENQ-CCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVS 541
           VQ DTLSPDSQASVLSFA    ENQ CCNS K+GV S QLFGQVIY N P EN    GVS
Sbjct: 481 VQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVEN----GVS 540

Query: 542 TNDGDKNPNQS 546
           TNDG KNPNQS
Sbjct: 541 TNDGGKNPNQS 543

[Close]

BLAST of MS001065 vs. ExPASy TrEMBL
Match: A0A5A7VER6 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001240 PE=3 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 2.5e-218
Identity = 376/546 (68.86%), Postives = 443/546 (81.14%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MDP LWRAF+GNS  IHTVGS+VYYF QGH+EQ++  P LSRSVLSNP TKC+V+AA + 
Sbjct: 2   MDPNLWRAFSGNSAHIHTVGSEVYYFVQGHLEQATYVPTLSRSVLSNPTTKCIVSAADYT 61

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVP--VLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           ADPLTDEVC+K NL+P   G  V   V P +G DD +G+ +R+  FAK+LTSSDANNGGG
Sbjct: 62  ADPLTDEVCLKFNLNPIPPGQSVSQVVHPFSGGDDGNGQRNRIEKFAKVLTSSDANNGGG 121

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR+CADSIFPPLNY  +PPVQTL+ITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 122 FSVPRYCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 181

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQI-GGVRYSAEENRSGEGG 241
           +KKL+AGD+V+FA+NS GDMFVGIRR++K   GGDC +W+SQ+ GG R + EE RSG+  
Sbjct: 182 HKKLIAGDAVIFARNSNGDMFVGIRRSSKSIGGGDCSKWNSQVGGGGRCNVEEKRSGDRS 241

Query: 242 REVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSS 301
             VF+R  IGK+PAE VA+AAELAA+F+PFEVVYYPR G SEFV+ AE V+ +L+Y W  
Sbjct: 242 PAVFTRTNIGKVPAETVAHAAELAAEFKPFEVVYYPRTGTSEFVIPAEKVNNSLNYQWYP 301

Query: 302 GLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNP 361
           G+RVKM V+TEDS KT WYQGTVTS S+P HGPW+ SPWRML+VTW+ETDAL SAK V+P
Sbjct: 302 GIRVKMPVETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQSAKFVSP 361

Query: 362 WEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSLLSF 421
           WEVE A+ + P+ P +H AKK+RG QKSG + GE +LFSPMMRFGD STM QFNQSLLSF
Sbjct: 362 WEVELASPSPPIPPPLHSAKKYRGPQKSGMVNGEADLFSPMMRFGD-STMGQFNQSLLSF 421

Query: 422 NSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQS 481
           NSFPAGMQGARQN F ES   N+Y EI+  T D+NSM K+N VPK Q VSTDL IGSVQS
Sbjct: 422 NSFPAGMQGARQNFFRESGSFNAYNEISPPTSDENSMFKLNTVPKTQTVSTDLHIGSVQS 481

Query: 482 DTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDG 541
           DTLSPDSQASVLSFA    ENQ CNSTK+GV SFQLFGQ+IY + P E  +++G  ++DG
Sbjct: 482 DTLSPDSQASVLSFATGTAENQSCNSTKAGVNSFQLFGQIIYMSPPVEKEIDNGADSDDG 541

Query: 542 DKNPNQ 545
           DK   Q
Sbjct: 542 DKKRKQ 546

[Close]

BLAST of MS001065 vs. ExPASy TrEMBL
Match: A0A1S3BD99 (Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103488417 PE=3 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 1.2e-217
Identity = 375/546 (68.68%), Postives = 442/546 (80.95%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           MDP LWRAF+GNS  IHTVGS+VYYF QGH+EQ++  P LSRSVLSNP TKC+V+AA + 
Sbjct: 2   MDPNLWRAFSGNSAHIHTVGSEVYYFVQGHLEQATYVPTLSRSVLSNPTTKCIVSAADYT 61

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVP--VLPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           ADPLTDEVC+K NL+P   G  V   V P +G DD +G+ +R+  FAK+LTSSDANNGGG
Sbjct: 62  ADPLTDEVCLKFNLNPIPPGQSVSQVVHPFSGGDDGNGQRNRIEKFAKVLTSSDANNGGG 121

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPR+CADSIFPPLNY  +PPVQTL+ITDVHGVVWNFRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 122 FSVPRYCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 181

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQI-GGVRYSAEENRSGEGG 241
           +KKL+AGD+V+FA+NS GDMFVGIRR++K   GGDC +W+SQ+ GG R + EE RSG+  
Sbjct: 182 HKKLIAGDAVIFARNSNGDMFVGIRRSSKSIGGGDCSKWNSQVGGGGRCNVEEKRSGDRS 241

Query: 242 REVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSS 301
             VF+R  IGK+PAE VA+AAELAA+F+PFEVVYYPR G SEFV+ AE V+ +L+Y W  
Sbjct: 242 PAVFTRTNIGKVPAETVAHAAELAAEFKPFEVVYYPRTGTSEFVIPAEKVNNSLNYQWYP 301

Query: 302 GLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNP 361
           G+RVKM V+TEDS KT WYQGTVTS S+P HGPW+ SPWRML+VTW+ETDAL SAK V+P
Sbjct: 302 GIRVKMPVETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQSAKFVSP 361

Query: 362 WEVEFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQFNQSLLSF 421
           WEVE A+ + P+ P +H AKK+RG QKSG +  E +LFSPMMRFGD STM QFNQSLLSF
Sbjct: 362 WEVELASPSPPIPPPLHSAKKYRGPQKSGMVNSEADLFSPMMRFGD-STMGQFNQSLLSF 421

Query: 422 NSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDLLIGSVQS 481
           NSFPAGMQGARQN F ES   N+Y EI+  T D+NSM K+N VPK Q VSTDL IGSVQS
Sbjct: 422 NSFPAGMQGARQNFFRESGSFNAYNEISPPTSDENSMFKLNTVPKTQTVSTDLHIGSVQS 481

Query: 482 DTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENGLNSGVSTNDG 541
           DTLSPDSQASVLSFA    ENQ CNSTK+GV SFQLFGQ+IY + P E  +++G  ++DG
Sbjct: 482 DTLSPDSQASVLSFATGTAENQSCNSTKAGVNSFQLFGQIIYMSPPVEKEIDNGADSDDG 541

Query: 542 DKNPNQ 545
           DK   Q
Sbjct: 542 DKKRKQ 546

[Close]

BLAST of MS001065 vs. TAIR 10
Match: AT1G77850.1 (auxin response factor 17 )

HSP 1 Score: 430.3 bits (1105), Expect = 2.4e-120
Identity = 253/556 (45.50%), Postives = 340/556 (61.15%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           +DP +WRA AG SVQI  + S+VYYF QGHVE     P LS    S     C++T+    
Sbjct: 16  VDPTIWRACAGASVQIPVLHSRVYYFPQGHVEH--CCPLLSTLPSSTSPVPCIITSIQLL 75

Query: 62  ADPLTDEVCIKLNLHPFGHGGEVPV--LPLAGSDDNSGEGDRVVSFAKILTSSDANNGGG 121
           ADP+TDEV   L L P       P         D +  + ++V +FAKILT SDANNGGG
Sbjct: 76  ADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNGGG 135

Query: 122 FSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVN 181
           FSVPRFCADS+FP LN+  DPPVQ L +TD+HG VW+FRHI+RGTPRRHLLTTGWSKFVN
Sbjct: 136 FSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVN 195

Query: 182 NKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSG---- 241
           +KKL+AGDSVVF + S  +MF+G+RR    ++ G      S  GG  Y+   ++S     
Sbjct: 196 SKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGG----SSYYGGDEYNGYYSQSSVAKE 255

Query: 242 -EGG-REVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALS 301
            +G  ++ F R+G GKL AEAV +A   A+Q  PFEVV+YP AGWSEFVV+AE V+ ++S
Sbjct: 256 DDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMS 315

Query: 302 YYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSA 361
            YW+ G RVKMA++TEDSS+ TW+QG V+S +  E GPWR SPW+ LQ+TWDE + L + 
Sbjct: 316 MYWTPGTRVKMAMETEDSSRITWFQGIVSS-TYQETGPWRGSPWKQLQITWDEPEILQNV 375

Query: 362 KGVNPWEVEFATAAAPVQPTVHQAKKFRGLQKSGQ-LTGEE-ELFSPMMRFGDSSTMEQF 421
           K VNPW+VE A  A  +      AK+ +  Q  G  L+G++ E+  P      ++  +  
Sbjct: 376 KRVNPWQVEIAAHATQLHTPFPPAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDP- 435

Query: 422 NQSLLSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTDL 481
           + S+ S+++FPAGMQGARQ  F     +            +N    ++ +P    VST++
Sbjct: 436 SPSMFSYSTFPAGMQGARQYDFGSFNPTGFIGGNPPQLFTNNF---LSPLPDLGKVSTEM 495

Query: 482 L-IGSVQSDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAENG-L 541
           +  GS  SD LSP+S  + LS   +   N+   S K  V S QLFG++I     +E+G  
Sbjct: 496 MNFGSPPSDNLSPNSNTTNLSSGNDLVGNRGPLSKK--VNSIQLFGKIITVEEHSESGPA 555

Query: 542 NSGVSTNDGDKNPNQS 546
            SG+   DG K  + +
Sbjct: 556 ESGLCEEDGSKESSDN 558

[Close]

BLAST of MS001065 vs. TAIR 10
Match: AT2G28350.1 (auxin response factor 10 )

HSP 1 Score: 342.4 bits (877), Expect = 6.6e-94
Identity = 202/451 (44.79%), Postives = 261/451 (57.87%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 61
           +DP+LW A AG+ VQI ++ S V+YF QGH E + + P      +  P   C V +  F 
Sbjct: 7   LDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVP-PLILCRVVSVKFL 66

Query: 62  ADPLTDEVCIKLNLHPFG------HGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDAN 121
           AD  TDEV  K+ L P            V  L    SD N    ++  SFAK LT SDAN
Sbjct: 67  ADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDAN 126

Query: 122 NGGGFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWS 181
           NGGGFSVPR+CA++IFP L+Y A+PPVQT+   D+HG  W FRHI+RGTPRRHLLTTGWS
Sbjct: 127 NGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWS 186

Query: 182 KFVNNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRY-SAEENRS 241
            FVN KKL+AGDS+VF ++  GD+ VGIRRA +G  G + G  +   G   +   +E+ +
Sbjct: 187 TFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDESTT 246

Query: 242 GEGGREVFSRNG--------IGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAE 301
                 +  RNG         G++  EAVA A   AA  + FEVVYYPRA   EF VKA 
Sbjct: 247 TTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAA 306

Query: 302 TVDKALSYYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDE 361
            V  A+   W SG+R KMA +TEDSS+ +W+ GTV++V + +   W NSPWR+LQV WDE
Sbjct: 307 DVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDE 366

Query: 362 TDALLSAKGVNPWEVEFATAAAPVQPTVHQA-----KKFRGLQK-SGQLTGEE-ELFSPM 421
            D L + K V+PW VE  +      PT+H +     KK R  Q       G +  +FSP 
Sbjct: 367 PDLLQNVKRVSPWLVELVSN----MPTIHLSPFSPRKKIRIPQPFEFPFHGTKFPIFSP- 426

Query: 422 MRFGDSSTMEQFNQSLLSFNSFPAGMQGARQ 431
             F ++   E         N+ PAG+QGARQ
Sbjct: 427 -GFANNGGGESMCYLSNDNNNAPAGIQGARQ 450

[Close]

BLAST of MS001065 vs. TAIR 10
Match: AT4G30080.1 (auxin response factor 16 )

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-93
Identity = 226/536 (42.16%), Postives = 289/536 (53.92%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLS-NPATKCLVTAAHF 61
           +DP+LW A AG  V++  + S+V+YF QGH E  ++  C+    L   P   C V A  +
Sbjct: 16  LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAE--NAYDCVDFGNLPIPPMVLCRVLAIKY 75

Query: 62  NADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNSGE--GDRVVSFAKILTSSDANNGG 121
            AD  +DEV  KL L P      V      G D N  E   ++  SFAK LT SDANNGG
Sbjct: 76  MADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNGG 135

Query: 122 GFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFV 181
           GFSVPR+CA++IFP L+Y A+PPVQT+   DVHG VW FRHI+RGTPRRHLLTTGWS FV
Sbjct: 136 GFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFV 195

Query: 182 NNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGD---CGRWHSQIGGVRYSA--EENR 241
           N KKLVAGDS+VF +   GD+ VGIRRA +G  G        W+   G   YS+   E+ 
Sbjct: 196 NQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLREDE 255

Query: 242 SGEGGREVFS-RNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKAL 301
           S    R   S  +  GK+ AE+V  AA LA   RPFEVVYYPRA  SEF VKA     A+
Sbjct: 256 SNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAAM 315

Query: 302 SYYWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLS 361
              W SG+R KMA +TEDSS+ +W+ GTV++V++ +   W NSPWR+LQV WDE D L +
Sbjct: 316 RIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQN 375

Query: 362 AKGVNPWEVEFATAAAPVQPTVHQ--AKKFRGLQKSGQLTGEEELFSPMMRFGDSSTMEQ 421
            K VNPW VE  +   P+  T      KK R  Q          +  P+  F  +  +  
Sbjct: 376 VKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSI--PVPSFPSNPLIRS 435

Query: 422 FNQSLLSFNSFPAGMQGARQNLFCESRLSNSYKEITSLTCDDNSMCKMNVVPKKQMVSTD 481
              S +  ++ P G+QGAR N      LS+S          D     +N  P     S+ 
Sbjct: 436 SPLSSV-LDNVPVGLQGARHNAHQYYGLSSS----------DLHHYYLNRPPPPPPPSSL 495

Query: 482 LLIGSVQSDTLSPDSQASVLSFAAEATENQCCNSTKSGVRSFQLFGQVIYTNLPAE 527
            L  S+    +   ++          T    CN TKS      LFG++I   LP E
Sbjct: 496 QLSPSLGLRNIDTKNEKGFCFLTMGTTP---CNDTKSKKSHIVLFGKLI---LPEE 530

[Close]

BLAST of MS001065 vs. TAIR 10
Match: AT1G19220.1 (auxin response factor 19 )

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-55
Identity = 139/368 (37.77%), Postives = 189/368 (51.36%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSN-----PATKCLVT 61
           ++ +LW A AG  V +  VGS V YF QGH EQ +++       + N         CL+ 
Sbjct: 20  INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLH 79

Query: 62  AAHFNADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNSGEGDRVVS--FAKILTSSDA 121
           +   +AD  TDEV  ++ L P        +L    + D   + +R  +  F K LT+SD 
Sbjct: 80  SVTLHADTETDEVYAQMTLQPVNKYDREALL----ASDMGLKLNRQPTEFFCKTLTASDT 139

Query: 122 NNGGGFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGW 181
           +  GGFSVPR  A+ IFPPL++   PP Q +   D+H   W FRHI+RG P+RHLLTTGW
Sbjct: 140 STHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGW 199

Query: 182 SKFVNNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRS 241
           S FV+ K+L AGDSV+F ++ +  + +GIRRA +            Q   +  S   + S
Sbjct: 200 SVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANR------------QTPTLSSSVISSDS 259

Query: 242 GEGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSY 301
                       IG L A A AN     A   PF + + PRA  SEFVV     +KAL  
Sbjct: 260 MH----------IGILAAAAHAN-----ANSSPFTIFFNPRASPSEFVVPLAKYNKALYA 319

Query: 302 YWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAK 361
             S G+R +M  +TED      Y GTVT +S  +   W+ S WR LQV WDE+ A     
Sbjct: 320 QVSLGMRFRMMFETEDCG-VRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPS 355

Query: 362 GVNPWEVE 363
            V+ WE+E
Sbjct: 380 RVSIWEIE 355

[Close]

BLAST of MS001065 vs. TAIR 10
Match: AT1G19850.1 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related )

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-55
Identity = 150/436 (34.40%), Postives = 213/436 (48.85%), Query Frame = 0


Query: 2   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQ--SSSAPCLSRSVLSNP----ATKCLV 61
           ++ +LW A AG  V +  VGS VYYF+QGH EQ   S+    +  V + P       C V
Sbjct: 51  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110

Query: 62  TAAHFNADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNSGEGDRVVSFAKILTSSDAN 121
                +AD  +DE+  +++L P     E  V P+       G       F K LT+SD +
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPV--HSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 170

Query: 122 NGGGFSVPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWS 181
             GGFSVPR  A+ +FPPL+Y A PP Q L + D+H   W FRHI+RG P+RHLLTTGWS
Sbjct: 171 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 230

Query: 182 KFVNNKKLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSG 241
            FV +K+L AGDSV+F ++ +  + VG+RRA +  T          +     SA+    G
Sbjct: 231 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTA---------LPSSVLSADSMHIG 290

Query: 242 EGGREVFSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKAL-SY 301
                              +A AA   A   PF + Y PRA  +EFV+      KA+   
Sbjct: 291 ------------------VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGS 350

Query: 302 YWSSGLRVKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAK 361
             S G+R  M  +TEDS K   Y GT+  +S  +   W  S WR LQV WDE        
Sbjct: 351 QLSVGMRFGMMFETEDSGKRR-YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPT 410

Query: 362 GVNPWEVE-------FATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSST 421
            V+PW++E       F +  + ++  +H +  F G  + G L     +  P++R  DS+ 
Sbjct: 411 RVSPWDIETPESLFIFPSLTSGLKRQLHPS-YFAGETEWGSL-----IKRPLIRVPDSA- 444

Query: 422 MEQFNQSLLSFNSFPA 424
                  ++ + SFP+
Sbjct: 471 -----NGIMPYASFPS 444

The following BLAST results are available for this feature:

BLAST of MS001065 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132271.1	0.0e+00	99.63	auxin response factor 17 [Momordica charantia]	[more]
XP_022951562.1	1.8e-226	73.68	auxin response factor 17-like isoform X1 [Cucurbita moschata] >XP_022951563.1 au...	[more]
XP_023536672.1	8.8e-226	73.87	auxin response factor 17-like [Cucurbita pepo subsp. pepo]	[more]
XP_038886591.1	2.0e-222	72.13	auxin response factor 17 [Benincasa hispida]	[more]
XP_023001892.1	4.7e-219	72.78	auxin response factor 17-like [Cucurbita maxima]	[more]

BLAST of MS001065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WU6	3.4e-119	45.50	Auxin response factor 17 OS=Arabidopsis thaliana OX=3702 GN=ARF17 PE=2 SV=1	[more]
Q9AV47	8.4e-94	39.30	Auxin response factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF22 PE=2 ...	[more]
Q9SKN5	9.2e-93	44.79	Auxin response factor 10 OS=Arabidopsis thaliana OX=3702 GN=ARF10 PE=1 SV=1	[more]
Q93YR9	2.1e-92	42.16	Auxin response factor 16 OS=Arabidopsis thaliana OX=3702 GN=ARF16 PE=1 SV=1	[more]
Q01I35	7.8e-92	39.89	Auxin response factor 10 OS=Oryza sativa subsp. indica OX=39946 GN=ARF10 PE=3 SV...	[more]

BLAST of MS001065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRS8	0.0e+00	99.63	Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111005166 PE=3 SV=1	[more]
A0A6J1GI16	8.6e-227	73.68	Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111454341 PE=3 SV=1	[more]
A0A6J1KHW7	2.3e-219	72.78	Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111495939 PE=3 SV=1	[more]
A0A5A7VER6	2.5e-218	68.86	Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A1S3BD99	1.2e-217	68.68	Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103488417 PE=3 SV=1	[more]

BLAST of MS001065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77850.1	2.4e-120	45.50	auxin response factor 17	[more]
AT2G28350.1	6.6e-94	44.79	auxin response factor 10	[more]
AT4G30080.1	1.5e-93	42.16	auxin response factor 16	[more]
AT1G19220.1	2.1e-55	37.77	auxin response factor 19	[more]
AT1G19850.1	2.1e-55	34.40	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 105..207 e-value: 1.6E-18 score: 77.5
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 105..206 e-value: 4.1E-21 score: 74.7
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 105..207 score: 12.957108
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 104..205 e-value: 2.4202E-20 score: 83.9164
IPR010525	Auxin response factor domain	PFAM	PF06507	Auxin_resp	coord: 258..341 e-value: 1.1E-27 score: 96.1
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 102..207 e-value: 1.8E-36 score: 126.2
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 101..225
None	No IPR available	GENE3D	2.30.30.1040		coord: 296..369 e-value: 7.7E-22 score: 78.5
None	No IPR available	PANTHER	PTHR31384:SF118	AUXIN RESPONSE FACTOR	coord: 1..540
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 1..540

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001065.1	MS001065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding