MS024678 (gene) Bitter gourd (TR) v1

Overview


Name	MS024678
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold92: 1516911 .. 1517825 (-)
RNA-Seq Expression	MS024678
Synteny	MS024678

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGCCACAACCTTTTGGGTCATGGAACTCAACACCAGTCCAAAAGAACCAAAGAGATCAAATTCAGAGAGAGATCCTAATCAACTGGAAATCAAATCGAACTGGTAAACAAAGTATACCTCGTTTACCATCTACCCAAAAACGCCATGAAATCGAATTTACCGAAATGATGCAGAATACTCCCAAAAACTACAACATCCCCAGTAAGTCAAACATCGGTAAACAGTCAAAAAAAACACAAAGCTCAGCACAAACTAACAATACCCAGATGTCAATATCCCCCAAAACGAGTCAAACCAGCATATCACGACTTGGCAGCACGTATTTGACCCAAACGAGCGAGACCCAGATGGCCAAATTAGGAGAATTTGAGAAAAACTGGAAGGCCCCCCGGCCCCCTTTCCCCAATCACAAACTGGGGATAAAAATCAAGGACAGCCGCAGTAGATTTATGGGCATAGTAGCGTTTGCTTACTGTTTTTGAGGTCTGTAAAGTCTGAGGCGAAGCAAAGTAAAGGCAGTGGAAGGTTTGATGACGAAGATGGTTGGTGGCGTGAGGTGGCGCTCGTGTATTACTGGATTTCAGAGTGTGCGAAAGGTGAGGGGGGAGAGGGACGTTTCGGTTGTGTGCCACTGCCAATCTCAAGAAGACGTTCTTTTGCGTGGAAATCTTCCACTTCCCAATGACCAATTATTACTTTTTTATTGAAAAAAGAATGTGGGTGTGGGTTCTGAATTCTGATGAAAGTCAGTGGGCTTGAGATGGATAATTTTGGGTGTGTTTTCTTGGCAGCAATGGCGGGTAGCTGTGTCAGATATCTAAATTTAGCCATGGGGAAGAGGAAGGGGAAGGGGAAGGGATTCAATTTGAAAACACGTACACCATTGCCAGTCGCTTTACAGTTTGTCTGA

mRNA sequence

ATGTTAGCCACAACCTTTTGGGTCATGGAACTCAACACCAGTCCAAAAGAACCAAAGAGATCAAATTCAGAGAGAGATCCTAATCAACTGGAAATCAAATCGAACTGGTCTGTAAAGTCTGAGGCGAAGCAAAGTAAAGGCAGTGGAAGGTTTGATGACGAAGATGGTTGGTGGCGTGAGGTGGCGCTCGTGTATTACTGGATTTCAGAGTGTGCGAAAGCAATGGCGGGTAGCTGTGTCAGATATCTAAATTTAGCCATGGGGAAGAGGAAGGGGAAGGGGAAGGGATTCAATTTGAAAACACGTACACCATTGCCAGTCGCTTTACAGTTTGTCTGA

Coding sequence (CDS)

ATGTTAGCCACAACCTTTTGGGTCATGGAACTCAACACCAGTCCAAAAGAACCAAAGAGATCAAATTCAGAGAGAGATCCTAATCAACTGGAAATCAAATCGAACTGGTCTGTAAAGTCTGAGGCGAAGCAAAGTAAAGGCAGTGGAAGGTTTGATGACGAAGATGGTTGGTGGCGTGAGGTGGCGCTCGTGTATTACTGGATTTCAGAGTGTGCGAAAGCAATGGCGGGTAGCTGTGTCAGATATCTAAATTTAGCCATGGGGAAGAGGAAGGGGAAGGGGAAGGGATTCAATTTGAAAACACGTACACCATTGCCAGTCGCTTTACAGTTTGTCTGA

Protein sequence

MLATTFWVMELNTSPKEPKRSNSERDPNQLEIKSNWSVKSEAKQSKGSGRFDDEDGWWREVALVYYWISECAKAMAGSCVRYLNLAMGKRKGKGKGFNLKTRTPLPVALQFV

Homology

The following BLAST results are available for this feature:

BLAST of MS024678 vs.


Match Name	E-value	Identity	Description

BLAST of MS024678 vs.


Match Name	E-value	Identity	Description

BLAST of MS024678 vs.


Match Name	E-value	Identity	Description

BLAST of MS024678 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024678.1	MS024678.1	mRNA