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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGATGATGCTCGACTGTCGGAAATCTCTTTGTTGGATGCCGATAGTGCTATTATGGCTGACAAAATCAAAGGCAACATTGTTATGTATGGTTTGTGACTTCATCATCATGGCATTTTGAATAGTTATTAGGCACAAAATTGGAGAGGGCAACCATCTGCGATTTCTTGGGATGACTCTACATCTTCATTGCACTCTTGTTCAGAAAACTTATATTTCCATATGCAATGGTGAAAAAGCAAAATGTGGGTGATGGTGGAGGTGCAGTGGTGATCGACTCAAACAAAGTTTTGGAATTTGTTGAGGATATCAGTATTTATTGTATTGAGATTCACCAACATGATTTGGGAAATTTGTCCAGTCCTTCCCTACTGGTCATAGTGGAAGATAAGCAACTTTAA mRNA sequence ATGGTGGATGATGCTCGACTGTCGGAAATCTCTTTGTTGGATGCCGATAGTGCTATTATGGCTGACAAAATCAAAGGCAACATTGTTATAAAACTTATATTTCCATATGCAATGGTGAAAAAGCAAAATGTGGGTGATGGTGGAGGTGCAGTGGTGATCGACTCAAACAAAGTTTTGGAATTTGTTGAGGATATCAGTATTTATTGTATTGAGATTCACCAACATGATTTGGGAAATTTGTCCAGTCCTTCCCTACTGGTCATAGTGGAAGATAAGCAACTTTAA Coding sequence (CDS) ATGGTGGATGATGCTCGACTGTCGGAAATCTCTTTGTTGGATGCCGATAGTGCTATTATGGCTGACAAAATCAAAGGCAACATTGTTATAAAACTTATATTTCCATATGCAATGGTGAAAAAGCAAAATGTGGGTGATGGTGGAGGTGCAGTGGTGATCGACTCAAACAAAGTTTTGGAATTTGTTGAGGATATCAGTATTTATTGTATTGAGATTCACCAACATGATTTGGGAAATTTGTCCAGTCCTTCCCTACTGGTCATAGTGGAAGATAAGCAACTTTAA Protein sequence MVDDARLSEISLLDADSAIMADKIKGNIVIKLIFPYAMVKKQNVGDGGGAVVIDSNKVLEFVEDISIYCIEIHQHDLGNLSSPSLLVIVEDKQL
Homology
BLAST of MC09g_new0257.1 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia]) HSP 1 Score: 77.4 bits (189), Expect = 7.02e-16 Identity = 52/106 (49.06%), Postives = 65/106 (61.32%), Query Frame = 0
Query: 1 MVDDARLSEISLLDADSAIMADKIKGNIVI--------KLIFPY-----AMVKKQNVGDG 60
M D +SEIS LDA+SA++ DKIK NIV+ ++ Y + +Q VGD
Sbjct: 1 MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60
Query: 61 GGAVVIDSNKVLEFVEDISIYCIEIH-QHDLGNLSSPSLLVIVEDK 92
GGA I SN VL VE I++ C+EI QHD GNLS+PSL V VEDK
Sbjct: 61 GGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDK 106
BLAST of MC09g_new0257.1 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.40e-16 Identity = 52/106 (49.06%), Postives = 65/106 (61.32%), Query Frame = 0
Query: 1 MVDDARLSEISLLDADSAIMADKIKGNIVI--------KLIFPY-----AMVKKQNVGDG 60
M D +SEIS LDA+SA++ DKIK NIV+ ++ Y + +Q VGD
Sbjct: 1 MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60
Query: 61 GGAVVIDSNKVLEFVEDISIYCIEIH-QHDLGNLSSPSLLVIVEDK 92
GGA I SN VL VE I++ C+EI QHD GNLS+PSL V VEDK
Sbjct: 61 GGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDK 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022159860.1 | 7.02e-16 | 49.06 | uncharacterized protein LOC111026150 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DZZ2 | 3.40e-16 | 49.06 | uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC09g_new0257.1-cds | MC09g_new0257.1-cds-MC09:12204839..12204927 | CDS |
| MC09g_new0257.1-cds | MC09g_new0257.1-cds-MC09:12205047..12205242 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC09g_new0257.1 | MC09g_new0257.1-protein | polypeptide |
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