Tan0001827 (gene) Snake gourd v1

Overview


Name	Tan0001827
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pentatricopeptide (PPR) repeat protein-like
Location	LG05: 9647687 .. 9649404 (-)
RNA-Seq Expression	Tan0001827
Synteny	Tan0001827

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAATTGGAAGTTGGAAACTTGAAATGGAACTTCGTCAGCTACTTCGACTGACCGAGTTGGGGGGCGCGTCGATGCAATTCACTTTCGACCGCTAATGGATCTCCGCTTATGTCCGCCGCCGTACGTCATCGGAGACGGCGTTCGACTCTTCTTAACGCCGCCTAAACGCCACGACGGCGTCCGTAGTTATCATTTCCGGCCAAATCTGCTGGTGAAATGTACTACACTCACCAAACAAAGCCACCGATTCCTCTCAACTTTGGCGACAACCGCTGCCGCCGGTGACCAATCGGCGACCAATCGCTTGATTCGAAAGTTTGTAGCAAGTTCTCCGAAATCCATTATTCTCAATGTCTTCTCCAATATCGTCTCCCCTCACACGGCTCAACCTGGACTCTGCTCCGTCGCTCTCACCGTAAGTAGGGCAAATTTTTCCTCACCATGGCTTTCGCGAAGATTGAGATGAAAATTGTGTTTCTAGATCTTTGATTTTCGCTTCCTTGGGTTTTCTTTTCCATCGAGTTCGTGAAACTTGTTTAACTTTTGTTCTTGCAGTTATATTCTAGAATTACTGAAGCGTCCTGGTTCACATGGAATTCCAAGCTAGTTGCTGACCTTGTTGCCTTCCTCGGTAAACATGGACTGTACAGTGACTCCGAAACCCTAATTTCAGAGGCAATTTCGAAGTTAGGGTTTCAAGAAAGGAAGCTTGTGAGTTTCTACTGCCAACTGATTGAATCTCAATCCAAACATGGTTCGGAAAGAGGATTTGGTGACTCTTATGCTCGTCTTCTTGAGCTTCTTTGTAATTCGTCTTCTGTTTATGTTAAACGTCGAGCTTATGAATCAATGGTTACTGGTTTGTGCTCCATGAAAAGACCAGAGGAAGCTGAGAGTTTGGTAAAAGAAATGAGAGCCAAAGGAATTAAGCCTTCTGGGTTTGAATATAGGTCCATTGTTTATGCTTATGGAACGTTGGGATTATTTGAAGATGTGAAGAGGAGTTTGGAACAGATGGAGAAGGATGATATCGCGATCGACACGGTTTGTTCCAACATGGTACTTTCATCCTATGGAGCTCACAATAAGCTTGCAGATATGGTTAAGTGGATTCAAAGAATGAAAACGTCTTCTCTTCCTTTCTCCATTCGGACTTATAATTCGGTCATGAATTCATGTCCAAAGATTATGTCACTGCTGCAAGACAAGAGCAGCGATCTTCCTCTTTCGTCCGAAGAATTGATTGCGGCTCTAGATGGTGATGAGGCTTTGTTGGTTGAAGAGTTGGTTGGTTCATCTGTTTTGAAAGAAGTAATGATGTGGGATGCAAGGGAGCTGAAGTTGGACTTACATGGAGCACATGTTGGTGCAGCTTATGTGATAATGTTGCAGTGGATGAAGGAGATGAGACTCAACTTTGAGGATGAGAGCTGTGTGATTCCAGCAGAAGTTACAGTGATTTGTGGATCTGGAAACCATAGTACTGTTAGAGGAGAGTCTCCTCTAAAAGTTCTGATTAAAGAAATTACAGTTCGGACAGAAAGTCCTTTGAGGATAGATCGAAAGAACACTGGTTGTTTTGTATCCAAAGGAAAAGCTGTAAAGAATTGGTTATGTTTGAAATGAATATAACATTGTTTCAAACAATATTTCTAAATTCCCAATGAGGAATAAGGGCTACATATTATTAATATTATGGAGGAAAAAGGATCAAAA

mRNA sequence

CTAAATTGGAAGTTGGAAACTTGAAATGGAACTTCGTCAGCTACTTCGACTGACCGAGTTGGGGGGCGCGTCGATGCAATTCACTTTCGACCGCTAATGGATCTCCGCTTATGTCCGCCGCCGTACGTCATCGGAGACGGCGTTCGACTCTTCTTAACGCCGCCTAAACGCCACGACGGCGTCCGTAGTTATCATTTCCGGCCAAATCTGCTGGTGAAATGTACTACACTCACCAAACAAAGCCACCGATTCCTCTCAACTTTGGCGACAACCGCTGCCGCCGGTGACCAATCGGCGACCAATCGCTTGATTCGAAAGTTTGTAGCAAGTTCTCCGAAATCCATTATTCTCAATGTCTTCTCCAATATCGTCTCCCCTCACACGGCTCAACCTGGACTCTGCTCCGTCGCTCTCACCTTATATTCTAGAATTACTGAAGCGTCCTGGTTCACATGGAATTCCAAGCTAGTTGCTGACCTTGTTGCCTTCCTCGGTAAACATGGACTGTACAGTGACTCCGAAACCCTAATTTCAGAGGCAATTTCGAAGTTAGGGTTTCAAGAAAGGAAGCTTGTGAGTTTCTACTGCCAACTGATTGAATCTCAATCCAAACATGGTTCGGAAAGAGGATTTGGTGACTCTTATGCTCGTCTTCTTGAGCTTCTTTGTAATTCGTCTTCTGTTTATGTTAAACGTCGAGCTTATGAATCAATGGTTACTGGTTTGTGCTCCATGAAAAGACCAGAGGAAGCTGAGAGTTTGGTAAAAGAAATGAGAGCCAAAGGAATTAAGCCTTCTGGGTTTGAATATAGGTCCATTGTTTATGCTTATGGAACGTTGGGATTATTTGAAGATGTGAAGAGGAGTTTGGAACAGATGGAGAAGGATGATATCGCGATCGACACGGTTTGTTCCAACATGGTACTTTCATCCTATGGAGCTCACAATAAGCTTGCAGATATGGTTAAGTGGATTCAAAGAATGAAAACGTCTTCTCTTCCTTTCTCCATTCGGACTTATAATTCGGTCATGAATTCATGTCCAAAGATTATGTCACTGCTGCAAGACAAGAGCAGCGATCTTCCTCTTTCGTCCGAAGAATTGATTGCGGCTCTAGATGGTGATGAGGCTTTGTTGGTTGAAGAGTTGGTTGGTTCATCTGTTTTGAAAGAAGTAATGATGTGGGATGCAAGGGAGCTGAAGTTGGACTTACATGGAGCACATGTTGGTGCAGCTTATGTGATAATGTTGCAGTGGATGAAGGAGATGAGACTCAACTTTGAGGATGAGAGCTGTGTGATTCCAGCAGAAGTTACAGTGATTTGTGGATCTGGAAACCATAGTACTGTTAGAGGAGAGTCTCCTCTAAAAGTTCTGATTAAAGAAATTACAGTTCGGACAGAAAGTCCTTTGAGGATAGATCGAAAGAACACTGGTTGTTTTGTATCCAAAGGAAAAGCTGTAAAGAATTGGTTATGTTTGAAATGAATATAACATTGTTTCAAACAATATTTCTAAATTCCCAATGAGGAATAAGGGCTACATATTATTAATATTATGGAGGAAAAAGGATCAAAA

Coding sequence (CDS)

ATGGATCTCCGCTTATGTCCGCCGCCGTACGTCATCGGAGACGGCGTTCGACTCTTCTTAACGCCGCCTAAACGCCACGACGGCGTCCGTAGTTATCATTTCCGGCCAAATCTGCTGGTGAAATGTACTACACTCACCAAACAAAGCCACCGATTCCTCTCAACTTTGGCGACAACCGCTGCCGCCGGTGACCAATCGGCGACCAATCGCTTGATTCGAAAGTTTGTAGCAAGTTCTCCGAAATCCATTATTCTCAATGTCTTCTCCAATATCGTCTCCCCTCACACGGCTCAACCTGGACTCTGCTCCGTCGCTCTCACCTTATATTCTAGAATTACTGAAGCGTCCTGGTTCACATGGAATTCCAAGCTAGTTGCTGACCTTGTTGCCTTCCTCGGTAAACATGGACTGTACAGTGACTCCGAAACCCTAATTTCAGAGGCAATTTCGAAGTTAGGGTTTCAAGAAAGGAAGCTTGTGAGTTTCTACTGCCAACTGATTGAATCTCAATCCAAACATGGTTCGGAAAGAGGATTTGGTGACTCTTATGCTCGTCTTCTTGAGCTTCTTTGTAATTCGTCTTCTGTTTATGTTAAACGTCGAGCTTATGAATCAATGGTTACTGGTTTGTGCTCCATGAAAAGACCAGAGGAAGCTGAGAGTTTGGTAAAAGAAATGAGAGCCAAAGGAATTAAGCCTTCTGGGTTTGAATATAGGTCCATTGTTTATGCTTATGGAACGTTGGGATTATTTGAAGATGTGAAGAGGAGTTTGGAACAGATGGAGAAGGATGATATCGCGATCGACACGGTTTGTTCCAACATGGTACTTTCATCCTATGGAGCTCACAATAAGCTTGCAGATATGGTTAAGTGGATTCAAAGAATGAAAACGTCTTCTCTTCCTTTCTCCATTCGGACTTATAATTCGGTCATGAATTCATGTCCAAAGATTATGTCACTGCTGCAAGACAAGAGCAGCGATCTTCCTCTTTCGTCCGAAGAATTGATTGCGGCTCTAGATGGTGATGAGGCTTTGTTGGTTGAAGAGTTGGTTGGTTCATCTGTTTTGAAAGAAGTAATGATGTGGGATGCAAGGGAGCTGAAGTTGGACTTACATGGAGCACATGTTGGTGCAGCTTATGTGATAATGTTGCAGTGGATGAAGGAGATGAGACTCAACTTTGAGGATGAGAGCTGTGTGATTCCAGCAGAAGTTACAGTGATTTGTGGATCTGGAAACCATAGTACTGTTAGAGGAGAGTCTCCTCTAAAAGTTCTGATTAAAGAAATTACAGTTCGGACAGAAAGTCCTTTGAGGATAGATCGAAAGAACACTGGTTGTTTTGTATCCAAAGGAAAAGCTGTAAAGAATTGGTTATGTTTGAAATGA

Protein sequence

MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTAAAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTWNSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFGDSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLKEVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTVRGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLCLK

Homology

[Close]

BLAST of Tan0001827 vs. ExPASy Swiss-Prot
Match: Q8GWA9 (Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana OX=3702 GN=At2g17033 PE=2 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 5.4e-134
Identity = 249/463 (53.78%), Postives = 329/463 (71.06%), Query Frame = 0


Query: 15  GVRLFL-TPPKR-HDGV----------RSYHFRPNLLVK----CTTLTKQSHRFLSTLAT 74
           G+R FL TPP+R   G+           S+ ++  ++V+       L K   RFLS+L++
Sbjct: 43  GLRRFLFTPPQRLSQGICYWGAELSNNVSWTYKTKMVVRSKAGAVPLMKHGDRFLSSLSS 102

Query: 75  TAAAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWF 134
            A AGD SA NR I+KFVA+SPKS+ LNV S+++S  T+ P L   AL+LYS ITEASWF
Sbjct: 103 PALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFFALSLYSEITEASWF 162

Query: 135 TWNSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERG 194
            WN KL+A+L+A L K   + +SETL+S A+S+L   ER    F C L+ES SK GS +G
Sbjct: 163 DWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLCNLVESNSKQGSIQG 222

Query: 195 FGDSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEY 254
           F ++  RL E++  SSSVYVK +AY+SMV+GLC+M +P +AE +++EMR + IKP  FEY
Sbjct: 223 FSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEY 282

Query: 255 RSIVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKT 314
           +S++Y YG LGLF+D+ R + +M  +   IDTVCSNMVLSSYGAH+ L  M  W+Q++K 
Sbjct: 283 KSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKG 342

Query: 315 SSLPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLK 374
            ++PFSIRTYNSV+NSCP I+S+L+D  S  P+S  EL   L+ DEALLV EL  SSVL 
Sbjct: 343 FNVPFSIRTYNSVLNSCPTIISMLKDLDS-CPVSLSELRTFLNEDEALLVHELTQSSVLD 402

Query: 375 EVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTV 434
           E + W+A E KLDLHG H+ ++Y+I+LQWM E RL F +E CVIPAE+ V+ GSG HS V
Sbjct: 403 EAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPAEIVVVSGSGKHSNV 462

Query: 435 RGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLC 462
           RGESP+K L+K+I VRT SP+RIDRKN G F++KGK VK WLC
Sbjct: 463 RGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 504

[Close]

BLAST of Tan0001827 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-08
Identity = 34/111 (30.63%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 203 YESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQME 262
           Y +++ GLC  K  ++A +L KEM  KGI+P+   Y S++      G + D  R L  M 
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 263 KDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVMN 314
           +  I  D    + ++ ++    KL +  K    M   S+  SI TY+S++N
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369

[Close]

BLAST of Tan0001827 vs. ExPASy Swiss-Prot
Match: Q8S8P6 (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX=3702 GN=At2g32630 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.8e-08
Identity = 32/113 (28.32%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 206 MVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQMEKDD 265
           +V GLC     E+++ L+KE   KGIKP  + Y +I+ AY     F  V+  L+ M+KD 
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289

Query: 266 IAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVMN-SCPK 318
           +  + V   +++     + K++D  K    M+   +   +  Y S+++ +C K
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342

[Close]

BLAST of Tan0001827 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-07
Identity = 35/137 (25.55%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 203 YESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQME 262
           Y ++V       R +EA   ++ M+A G+KPS   Y ++V AY   GL +     ++ M 
Sbjct: 505 YTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMR 564

Query: 263 KDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVMNSCPKIMSLL 322
            D +   TV  N +++++G   ++A+    +Q MK + L   + TY ++M +  ++    
Sbjct: 565 ADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRV---- 624

Query: 323 QDKSSDLPLSSEELIAA 340
            ++   +P+  EE+I +
Sbjct: 625 -EQFEKVPVIYEEMITS 636

[Close]

BLAST of Tan0001827 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-07
Identity = 32/112 (28.57%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 201 RAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQ 260
           R Y  ++  LC  +R  EA +LVKEM   GIKP+   Y  ++ +  +   FE  +  L Q
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383

Query: 261 MEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVM 313
           M +  +  + +  N +++ Y     + D V  ++ M++  L  + RTYN ++
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435

[Close]

BLAST of Tan0001827 vs. NCBI nr
Match: XP_023512520.1 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775.4 bits (2001), Expect = 2.8e-220
Identity = 384/459 (83.66%), Postives = 419/459 (91.29%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LRLCPPPYVIGD VRLF   PKR+DG  SYHFRPNL VKC TLTKQSHRFLSTLATTA
Sbjct: 1   MELRLCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           AAGD SATNRLIRKFVASSPKSI LNV S+I+S  TAQPGLCSVALTLYSRITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFL K+G   DSETLISEAISKLG QERKLV+FYCQL+ESQSKHGSERGFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           ++YA LLELL NSSS+YVKRRAYESMVTGLCSMKRP+EAESLVKEM+AKG  P+ FEYRS
Sbjct: 181 NAYACLLELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFED+KRSLE+M+ DDIA+DTVCSNMVLSSYGAHNKLADMV W+Q MKTS+
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGAHNKLADMVLWLQIMKTSA 300

Query: 301 LPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLKEV 360
           LPFS+RTYNSV+NSCPKI S+LQDKS DLP+  E+LI  LDGDEALLVEELVGSSVLKEV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSILQDKSGDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 361 MMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTVRG 420
           M+WDA E+KLDLHG HVGAAYVI+L+WMKEMRL FEDESCVIPA+VTVICGSGNHS VRG
Sbjct: 361 MVWDAMEMKLDLHGVHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 421 ESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNW 460
           ESP+K LI+EI  RT+SPLRIDRKNTGCF++KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFLAKGKAVKNW 459

[Close]

BLAST of Tan0001827 vs. NCBI nr
Match: XP_022943803.1 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita moschata])

HSP 1 Score: 771.2 bits (1990), Expect = 5.2e-219
Identity = 383/459 (83.44%), Postives = 416/459 (90.63%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LR CPPPYVIGD VRLF   PKR+DG  SYHFRPNL VKC TLTKQSHRFLSTLATTA
Sbjct: 1   MELRFCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           AAGD SATNRLIRKFVASSPKSI LNV S+I+S  TAQPGLCSVALTLYSRITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFL K+G   DSETLISEAISKLG QERKLV+FYCQL+ESQSKHGSERGFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
            +YA LLELL  SSS+YVKRRAYESMVTGLCSMKRP+EAESLVKEM+AKG  P+ FEYRS
Sbjct: 181 IAYACLLELLYKSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFED+KRSLE+M+ DDIA+DTVCSNMVLSSYG HNKLADMV W+Q MKTS+
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 301 LPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLKEV 360
           LPFS+RTYNSV+NSCPKI S+LQDKS DLP+  E+LI  LDGDEALLVEELVGSSVLKEV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSDDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 361 MMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTVRG 420
           M+WDA E+KLDLHGAHVGAAYVI+L+WMKEMRL FEDESCVIPA+VTVICGSGNHS VRG
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 421 ESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNW 460
           ESP+K LI+EI  RT+SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Tan0001827 vs. NCBI nr
Match: KAG7010834.1 (Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 770.4 bits (1988), Expect = 8.9e-219
Identity = 382/459 (83.22%), Postives = 417/459 (90.85%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LR CPPPYVIGD VRLF   PKR+D   SYHFRPNL VKC TLTKQSHRFLSTLATTA
Sbjct: 1   MELRFCPPPYVIGDSVRLFSKAPKRYDRFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           AAGD SATNRLIRKFVASSPKS+ LNV S+I+S  TAQPGLCSVALTLYSRITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSLTLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFL K+G   DSETLISEAISKLG QERKLV+FYCQL+ESQSKHGSERGFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           ++YARLLELL NSSS+YVKRRAYESMVTGLCSMKRP+EAESLVKEM+AKG  P+ FEYRS
Sbjct: 181 NAYARLLELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFED+KRSLE+M+ DDIA+DTVCSNMVLSSYG HNKLADMV W+Q MKTS+
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 301 LPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLKEV 360
           LPFS+RTYNSV+NSC KI S+LQDKS DLP+  E+LI  LDGDEALLVEELVGSSVLKEV
Sbjct: 301 LPFSVRTYNSVLNSCLKITSMLQDKSGDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 361 MMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTVRG 420
           M+WDA E+KLDLHGAHVGAAYVI+L+WMKEMRL FEDESCVIPA+VTVICGSGNHS VRG
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 421 ESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNW 460
           ESP+K LI+EI  RT+SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Tan0001827 vs. NCBI nr
Match: XP_038902941.1 (pentatricopeptide repeat-containing protein At2g17033 [Benincasa hispida])

HSP 1 Score: 756.1 bits (1951), Expect = 1.7e-214
Identity = 386/465 (83.01%), Postives = 421/465 (90.54%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LRL  PP+VIGDGVRLFL P K HDG RSY F PNL VKCTTLTKQ+HRFLSTLATTA
Sbjct: 1   MELRLYLPPFVIGDGVRLFLKPFKLHDGFRSYPFVPNLQVKCTTLTKQTHRFLSTLATTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           A GDQSATNRLIRKFVASSPKSI LNV SNIVSPHTAQPGLCSVALTLYSRITEASWFTW
Sbjct: 61  ATGDQSATNRLIRKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADL+AFL ++GL+S+SE LISE ISKLGFQERKLV+FY QLIESQSKHGSERGFG
Sbjct: 121 NSKLVADLIAFLDQNGLHSESEALISETISKLGFQERKLVNFYFQLIESQSKHGSERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           +SY RLLE L NS SVYVKRRAYESMVTGLCSMKRP+EAESLV+EMR+KGI PS +EYRS
Sbjct: 181 NSYTRLLEFLYNSPSVYVKRRAYESMVTGLCSMKRPQEAESLVEEMRSKGITPSAYEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFED+KR+L+QME DD A+DTVCSNMVLSSYGAHNKLADMV W+QR KTS+
Sbjct: 241 IIYAYGTLGLFEDMKRTLKQMENDDYALDTVCSNMVLSSYGAHNKLADMVLWLQRTKTST 300

Query: 301 L-PFSIRTYNSVMNSCPKIMSLLQD-KSSDLPLSSEELIAALDG-DEALLVEEL-VGSSV 360
           L  FS+RTYNSV+NSCPKI SLLQD KS + P+  E+L+A LDG +EALLVEEL VGSSV
Sbjct: 301 LCNFSVRTYNSVLNSCPKITSLLQDPKSGEFPVLIEDLVAVLDGHEEALLVEELVVGSSV 360

Query: 361 LKEVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHS 420
           LKEVM+WDA ELKLDLHGAHVG AYVIMLQWMKEMRL FEDESC+IPA+VT+I GSGNHS
Sbjct: 361 LKEVMVWDAMELKLDLHGAHVGTAYVIMLQWMKEMRLKFEDESCMIPAQVTLISGSGNHS 420

Query: 421 TVRGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLC 462
            VRGESP+K LIKEI +RTESPLRIDRKNTGCF+SKGKAVKNWLC
Sbjct: 421 IVRGESPVKALIKEILIRTESPLRIDRKNTGCFISKGKAVKNWLC 465

[Close]

BLAST of Tan0001827 vs. NCBI nr
Match: XP_022985638.1 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita maxima])

HSP 1 Score: 755.7 bits (1950), Expect = 2.3e-214
Identity = 376/459 (81.92%), Postives = 413/459 (89.98%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LRLCPPPYVIGD VRLF   PKR+DG  SYHFRPNL VKC TLTKQSHRFLSTLATTA
Sbjct: 1   MELRLCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           AAGD SATNRLIRKFVASSPKSI LNV S+I+S  TAQPGLCSVA  LYSRITE SWF W
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVARILYSRITETSWFAW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFL K+G   DSETLISEAISKLG QERKLV+FYCQL+ESQSKHGSERGF 
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFR 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           ++YA L ELL NSSS+YVKRRAYESMVTGLCSMKRP+EAESLVKEM+AKG  P+ FEYRS
Sbjct: 181 NAYACLHELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFED+KRSLE+M+ D IA+DTVCSNMVLSSYG HNKLADMV W+Q MKTS+
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDHIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 301 LPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLKEV 360
           LPFS+RTYNSV+NSCPKI S+LQDKS DLP+  E+LI+ LDGDEALLVEELVGSSVL+EV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSGDLPVLIEDLISVLDGDEALLVEELVGSSVLREV 360

Query: 361 MMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTVRG 420
           M+WDA E+KLDLHGAHVGAAYVI+L+WMKEMRL FE+ESCVIPA+VTVICGSGNHS VR 
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFENESCVIPAQVTVICGSGNHSIVRR 420

Query: 421 ESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNW 460
           ESP+K LI+EI  RT+SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Tan0001827 vs. ExPASy TrEMBL
Match: A0A6J1FXE0 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448442 PE=3 SV=1)

HSP 1 Score: 771.2 bits (1990), Expect = 2.5e-219
Identity = 383/459 (83.44%), Postives = 416/459 (90.63%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LR CPPPYVIGD VRLF   PKR+DG  SYHFRPNL VKC TLTKQSHRFLSTLATTA
Sbjct: 1   MELRFCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           AAGD SATNRLIRKFVASSPKSI LNV S+I+S  TAQPGLCSVALTLYSRITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFL K+G   DSETLISEAISKLG QERKLV+FYCQL+ESQSKHGSERGFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
            +YA LLELL  SSS+YVKRRAYESMVTGLCSMKRP+EAESLVKEM+AKG  P+ FEYRS
Sbjct: 181 IAYACLLELLYKSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFED+KRSLE+M+ DDIA+DTVCSNMVLSSYG HNKLADMV W+Q MKTS+
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 301 LPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLKEV 360
           LPFS+RTYNSV+NSCPKI S+LQDKS DLP+  E+LI  LDGDEALLVEELVGSSVLKEV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSDDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 361 MMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTVRG 420
           M+WDA E+KLDLHGAHVGAAYVI+L+WMKEMRL FEDESCVIPA+VTVICGSGNHS VRG
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 421 ESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNW 460
           ESP+K LI+EI  RT+SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Tan0001827 vs. ExPASy TrEMBL
Match: A0A6J1JE75 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483639 PE=3 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 1.1e-214
Identity = 376/459 (81.92%), Postives = 413/459 (89.98%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LRLCPPPYVIGD VRLF   PKR+DG  SYHFRPNL VKC TLTKQSHRFLSTLATTA
Sbjct: 1   MELRLCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           AAGD SATNRLIRKFVASSPKSI LNV S+I+S  TAQPGLCSVA  LYSRITE SWF W
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVARILYSRITETSWFAW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFL K+G   DSETLISEAISKLG QERKLV+FYCQL+ESQSKHGSERGF 
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFR 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           ++YA L ELL NSSS+YVKRRAYESMVTGLCSMKRP+EAESLVKEM+AKG  P+ FEYRS
Sbjct: 181 NAYACLHELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFED+KRSLE+M+ D IA+DTVCSNMVLSSYG HNKLADMV W+Q MKTS+
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDHIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 301 LPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLKEV 360
           LPFS+RTYNSV+NSCPKI S+LQDKS DLP+  E+LI+ LDGDEALLVEELVGSSVL+EV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSGDLPVLIEDLISVLDGDEALLVEELVGSSVLREV 360

Query: 361 MMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTVRG 420
           M+WDA E+KLDLHGAHVGAAYVI+L+WMKEMRL FE+ESCVIPA+VTVICGSGNHS VR 
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFENESCVIPAQVTVICGSGNHSIVRR 420

Query: 421 ESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNW 460
           ESP+K LI+EI  RT+SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Tan0001827 vs. ExPASy TrEMBL
Match: Q5DMV7 (Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.7e-212
Identity = 383/465 (82.37%), Postives = 417/465 (89.68%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LRLCPPPYVIGDGVRLFL P KR DG RSY F PNL VKCTTLTKQ+HRFLSTL+TT 
Sbjct: 1   MELRLCPPPYVIGDGVRLFLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTG 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           A GDQSATNRLIRKFVASSPKSI L+V SNIVS HT QP LCS ALTLYSRITEASWFTW
Sbjct: 61  ATGDQSATNRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFLG++GLYS+SE LISEAISKLG QERKLV+FY QL+ESQSKHG ERGFG
Sbjct: 121 NSKLVADLVAFLGQNGLYSESEALISEAISKLGSQERKLVNFYSQLVESQSKHGFERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           DSY+RL ELL NS SVYVKRRAYESMVTGLCSMKRP EAESLVKEMR+KGI P+ +EYRS
Sbjct: 181 DSYSRLFELLYNSPSVYVKRRAYESMVTGLCSMKRPHEAESLVKEMRSKGITPTAYEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSS 300
           I+YAYGTLGLFE++KRSL+QME D+I +DTVCSNMVLSSYGAHNKL DM+ W+QRMKTSS
Sbjct: 241 IIYAYGTLGLFEEMKRSLKQMENDNIELDTVCSNMVLSSYGAHNKLGDMLLWLQRMKTSS 300

Query: 301 -LPFSIRTYNSVMNSCPKIMSLLQD-KSSDLPLSSEELIAALDGD-EALLVEE-LVGSSV 360
               S+RTYNSV+NSCPKI S+LQD KS DLP+  E+LIA LDGD EALLV+E LVGSSV
Sbjct: 301 HCKSSVRTYNSVLNSCPKITSMLQDHKSGDLPVLIEDLIAILDGDEEALLVKELLVGSSV 360

Query: 361 LKEVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHS 420
           L E+M+WDA ELKLDLHGAHVGAAYVIMLQW+KEMRLNFEDES VIPA+VT+ICGSG HS
Sbjct: 361 LNEIMVWDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESNVIPAQVTLICGSGKHS 420

Query: 421 TVRGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLC 462
            VRGESP+K LIKEI VRTESPLRIDRKNTGCF+SKGKAVKNWLC
Sbjct: 421 IVRGESPVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465

[Close]

BLAST of Tan0001827 vs. ExPASy TrEMBL
Match: M4R4K5 (Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 8.7e-212
Identity = 382/465 (82.15%), Postives = 416/465 (89.46%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LRLCPPPYVIGDGVRL L P KR DG RSY F PNL VKCTTLTKQ+HRFLSTL+TTA
Sbjct: 1   MELRLCPPPYVIGDGVRLLLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           A GDQSATNRLIRKFVASSPKSI L+V SNIVS HT QP LCS ALTLYSRITEASWFTW
Sbjct: 61  ATGDQSATNRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFLG++GLYS+SE LISEAISKLG QERKLV+FY QL+ESQSKHG ERGFG
Sbjct: 121 NSKLVADLVAFLGQNGLYSESEALISEAISKLGSQERKLVNFYSQLVESQSKHGFERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           DSY+RL ELL NS SVYVKRRAYESMVTGLCSMKRP EAESLVKEMR+KGI P+ +EYRS
Sbjct: 181 DSYSRLFELLYNSPSVYVKRRAYESMVTGLCSMKRPHEAESLVKEMRSKGITPTAYEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTS- 300
           I+YAYGTLGLFE++KRSL+QME D+I +DTVCSNMVLSSYGAHNKL DM+ W+QRMKTS 
Sbjct: 241 IIYAYGTLGLFEEMKRSLKQMENDNIELDTVCSNMVLSSYGAHNKLGDMLLWLQRMKTSP 300

Query: 301 SLPFSIRTYNSVMNSCPKIMSLLQD-KSSDLPLSSEELIAALDGD-EALLVEE-LVGSSV 360
               S+RTYNSV+NSCPKI S+LQD KS DLP+  E+LIA LDGD EALLV+E LVGSSV
Sbjct: 301 HCKSSVRTYNSVLNSCPKITSMLQDHKSGDLPVLIEDLIAILDGDEEALLVKELLVGSSV 360

Query: 361 LKEVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHS 420
           L E+M+WDA ELKLDLHGAHVGAAYVIMLQW+KEMRLNFEDES VIPA+VT+ICGSG HS
Sbjct: 361 LNEIMVWDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESYVIPAQVTLICGSGKHS 420

Query: 421 TVRGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLC 462
            VRGESP+K LIKEI VRTESPLRIDRKNTGCF+SKGKAVKNWLC
Sbjct: 421 IVRGESPVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465

[Close]

BLAST of Tan0001827 vs. ExPASy TrEMBL
Match: A0A5A7TCG5 (PPR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001180 PE=3 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 2.1e-210
Identity = 380/465 (81.72%), Postives = 415/465 (89.25%), Query Frame = 0


Query: 1   MDLRLCPPPYVIGDGVRLFLTPPKRHDGVRSYHFRPNLLVKCTTLTKQSHRFLSTLATTA 60
           M+LRLCPPPYVIGDGVRL L P K  DG RSY F PNL VKCTTLTKQ+HRFLSTL+TTA
Sbjct: 1   MELRLCPPPYVIGDGVRLLLQPLKCLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTA 60

Query: 61  AAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120
           A GDQSATNRLIRKFVASSPKSI L+V SNIVS HT QP LCS ALTLYSRITEASWFTW
Sbjct: 61  ATGDQSATNRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTW 120

Query: 121 NSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERGFG 180
           NSKLVADLVAFLG++GLYS+SE LISEAISKLG QERKLV+F+ QL+ESQSKHG ERGFG
Sbjct: 121 NSKLVADLVAFLGQNGLYSESEALISEAISKLGSQERKLVNFFSQLVESQSKHGFERGFG 180

Query: 181 DSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRS 240
           DSY+RL ELL NS SVYVKRRAYESMVTGLCSMKRP EAESLVKEMR+KGI P+ +EYRS
Sbjct: 181 DSYSRLFELLYNSPSVYVKRRAYESMVTGLCSMKRPHEAESLVKEMRSKGITPTAYEYRS 240

Query: 241 IVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTS- 300
           I+YAYGTLGLFE++KRSL+QME D+I +DTVCSNMVLSSYGAHNKL DM+ W+QRMKTS 
Sbjct: 241 IIYAYGTLGLFEEMKRSLKQMENDNIELDTVCSNMVLSSYGAHNKLGDMLLWLQRMKTSP 300

Query: 301 SLPFSIRTYNSVMNSCPKIMSLLQD-KSSDLPLSSEELIAALDGD-EALLVEE-LVGSSV 360
               S+RTYNSV+NSCPKI S+LQD KS DLP+  E+LIA LDGD EALLV+E LVGSSV
Sbjct: 301 HCKSSVRTYNSVLNSCPKITSMLQDHKSGDLPVLIEDLIAILDGDEEALLVKELLVGSSV 360

Query: 361 LKEVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHS 420
           L E+M+WDA ELKLDLHGAHVGAAYVIMLQW+KEMRLNFEDES VIPA+VT+ICGSG HS
Sbjct: 361 LNEIMVWDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESYVIPAQVTLICGSGKHS 420

Query: 421 TVRGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLC 462
            VRGESP+K LIKEI VRTESPLRIDRKNTGCF+SKGKAVKNWLC
Sbjct: 421 IVRGESPVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465

[Close]

BLAST of Tan0001827 vs. TAIR 10
Match: AT2G17033.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 479.2 bits (1232), Expect = 3.8e-135
Identity = 249/463 (53.78%), Postives = 329/463 (71.06%), Query Frame = 0


Query: 15  GVRLFL-TPPKR-HDGV----------RSYHFRPNLLVK----CTTLTKQSHRFLSTLAT 74
           G+R FL TPP+R   G+           S+ ++  ++V+       L K   RFLS+L++
Sbjct: 42  GLRRFLFTPPQRLSQGICYWGAELSNNVSWTYKTKMVVRSKAGAVPLMKHGDRFLSSLSS 101

Query: 75  TAAAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWF 134
            A AGD SA NR I+KFVA+SPKS+ LNV S+++S  T+ P L   AL+LYS ITEASWF
Sbjct: 102 PALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFFALSLYSEITEASWF 161

Query: 135 TWNSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERG 194
            WN KL+A+L+A L K   + +SETL+S A+S+L   ER    F C L+ES SK GS +G
Sbjct: 162 DWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLCNLVESNSKQGSIQG 221

Query: 195 FGDSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEY 254
           F ++  RL E++  SSSVYVK +AY+SMV+GLC+M +P +AE +++EMR + IKP  FEY
Sbjct: 222 FSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEY 281

Query: 255 RSIVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKT 314
           +S++Y YG LGLF+D+ R + +M  +   IDTVCSNMVLSSYGAH+ L  M  W+Q++K 
Sbjct: 282 KSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKG 341

Query: 315 SSLPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLK 374
            ++PFSIRTYNSV+NSCP I+S+L+D  S  P+S  EL   L+ DEALLV EL  SSVL 
Sbjct: 342 FNVPFSIRTYNSVLNSCPTIISMLKDLDS-CPVSLSELRTFLNEDEALLVHELTQSSVLD 401

Query: 375 EVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTV 434
           E + W+A E KLDLHG H+ ++Y+I+LQWM E RL F +E CVIPAE+ V+ GSG HS V
Sbjct: 402 EAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPAEIVVVSGSGKHSNV 461

Query: 435 RGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLC 462
           RGESP+K L+K+I VRT SP+RIDRKN G F++KGK VK WLC
Sbjct: 462 RGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 503

[Close]

BLAST of Tan0001827 vs. TAIR 10
Match: AT2G17033.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 479.2 bits (1232), Expect = 3.8e-135
Identity = 249/463 (53.78%), Postives = 329/463 (71.06%), Query Frame = 0


Query: 15  GVRLFL-TPPKR-HDGV----------RSYHFRPNLLVK----CTTLTKQSHRFLSTLAT 74
           G+R FL TPP+R   G+           S+ ++  ++V+       L K   RFLS+L++
Sbjct: 43  GLRRFLFTPPQRLSQGICYWGAELSNNVSWTYKTKMVVRSKAGAVPLMKHGDRFLSSLSS 102

Query: 75  TAAAGDQSATNRLIRKFVASSPKSIILNVFSNIVSPHTAQPGLCSVALTLYSRITEASWF 134
            A AGD SA NR I+KFVA+SPKS+ LNV S+++S  T+ P L   AL+LYS ITEASWF
Sbjct: 103 PALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFFALSLYSEITEASWF 162

Query: 135 TWNSKLVADLVAFLGKHGLYSDSETLISEAISKLGFQERKLVSFYCQLIESQSKHGSERG 194
            WN KL+A+L+A L K   + +SETL+S A+S+L   ER    F C L+ES SK GS +G
Sbjct: 163 DWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLCNLVESNSKQGSIQG 222

Query: 195 FGDSYARLLELLCNSSSVYVKRRAYESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEY 254
           F ++  RL E++  SSSVYVK +AY+SMV+GLC+M +P +AE +++EMR + IKP  FEY
Sbjct: 223 FSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEY 282

Query: 255 RSIVYAYGTLGLFEDVKRSLEQMEKDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKT 314
           +S++Y YG LGLF+D+ R + +M  +   IDTVCSNMVLSSYGAH+ L  M  W+Q++K 
Sbjct: 283 KSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKG 342

Query: 315 SSLPFSIRTYNSVMNSCPKIMSLLQDKSSDLPLSSEELIAALDGDEALLVEELVGSSVLK 374
            ++PFSIRTYNSV+NSCP I+S+L+D  S  P+S  EL   L+ DEALLV EL  SSVL 
Sbjct: 343 FNVPFSIRTYNSVLNSCPTIISMLKDLDS-CPVSLSELRTFLNEDEALLVHELTQSSVLD 402

Query: 375 EVMMWDARELKLDLHGAHVGAAYVIMLQWMKEMRLNFEDESCVIPAEVTVICGSGNHSTV 434
           E + W+A E KLDLHG H+ ++Y+I+LQWM E RL F +E CVIPAE+ V+ GSG HS V
Sbjct: 403 EAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPAEIVVVSGSGKHSNV 462

Query: 435 RGESPLKVLIKEITVRTESPLRIDRKNTGCFVSKGKAVKNWLC 462
           RGESP+K L+K+I VRT SP+RIDRKN G F++KGK VK WLC
Sbjct: 463 RGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 504

[Close]

BLAST of Tan0001827 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-09
Identity = 34/111 (30.63%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 203 YESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQME 262
           Y +++ GLC  K  ++A +L KEM  KGI+P+   Y S++      G + D  R L  M 
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 263 KDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVMN 314
           +  I  D    + ++ ++    KL +  K    M   S+  SI TY+S++N
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369

[Close]

BLAST of Tan0001827 vs. TAIR 10
Match: AT2G32630.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 5.5e-09
Identity = 32/113 (28.32%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 206 MVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQMEKDD 265
           +V GLC     E+++ L+KE   KGIKP  + Y +I+ AY     F  V+  L+ M+KD 
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289

Query: 266 IAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVMN-SCPK 318
           +  + V   +++     + K++D  K    M+   +   +  Y S+++ +C K
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342

[Close]

BLAST of Tan0001827 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.1e-08
Identity = 33/111 (29.73%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 203 YESMVTGLCSMKRPEEAESLVKEMRAKGIKPSGFEYRSIVYAYGTLGLFEDVKRSLEQME 262
           Y +++ GLC  K  ++A +L  EM  KGI+P  F Y S++      G + D  R L  M 
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 263 KDDIAIDTVCSNMVLSSYGAHNKLADMVKWIQRMKTSSLPFSIRTYNSVMN 314
           +  I  + V  + ++ ++    KL +  K    M   S+   I TY+S++N
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371

The following BLAST results are available for this feature:

BLAST of Tan0001827 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWA9	5.4e-134	53.78	Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana OX...	[more]
Q9SXD1	2.7e-08	30.63	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q8S8P6	7.8e-08	28.32	Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX...	[more]
Q84ZD2	2.9e-07	25.55	Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza...	[more]
Q9LSL9	2.9e-07	28.57	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]

BLAST of Tan0001827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512520.1	2.8e-220	83.66	pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita pepo...	[more]
XP_022943803.1	5.2e-219	83.44	pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita mosc...	[more]
KAG7010834.1	8.9e-219	83.22	Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyr...	[more]
XP_038902941.1	1.7e-214	83.01	pentatricopeptide repeat-containing protein At2g17033 [Benincasa hispida]	[more]
XP_022985638.1	2.3e-214	81.92	pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita maxi...	[more]

BLAST of Tan0001827 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXE0	2.5e-219	83.44	pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1JE75	1.1e-214	81.92	pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita ma...	[more]
Q5DMV7	1.7e-212	82.37	Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 ...	[more]
M4R4K5	8.7e-212	82.15	Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 ...	[more]
A0A5A7TCG5	2.1e-210	81.72	PPR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001180 PE...	[more]

BLAST of Tan0001827 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17033.1	3.8e-135	53.78	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G17033.2	3.8e-135	53.78	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G62670.1	1.9e-09	30.63	rna processing factor 2	[more]
AT2G32630.1	5.5e-09	28.32	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G62910.1	2.1e-08	29.73	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 367..454 e-value: 1.4E-17 score: 74.4
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 370..454 score: 14.626359
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 202..234 e-value: 7.8E-8 score: 30.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 202..231 e-value: 1.1E-5 score: 25.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 199..233 score: 11.73961
None	No IPR available	GENE3D	3.30.1370.110		coord: 369..451 e-value: 4.6E-8 score: 35.2
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 42..461
None	No IPR available	PANTHER	PTHR47932:SF53	OS02G0120000 PROTEIN	coord: 42..461
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 97..327 e-value: 3.4E-21 score: 77.9
IPR036063	Smr domain superfamily	SUPERFAMILY	160443	SMR domain-like	coord: 368..450

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001827.1	Tan0001827.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding