MC01g0716.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0716.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP-diphosphatase
Location	MC01: 13285912 .. 13286064 (+)
Sequence length	153
RNA-Seq Expression	MC01g0716.1
Synteny	MC01g0716.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATCGGCTCGAGTGAACTGGTGGCCGAACTTCGGGCGGCAGATTTCAAGAGGACCGGAGAGCGCGATTGCAGAACCAAATATGCAGATGCGAATGGCGCATTCCCAAATCTCAATGAGGAAGATTTGACATTCGTTTGCATGGACCTGGTT

mRNA sequence

TTCATCGGCTCGAGTGAACTGGTGGCCGAACTTCGGGCGGCAGATTTCAAGAGGACCGGAGAGCGCGATTGCAGAACCAAATATGCAGATGCGAATGGCGCATTCCCAAATCTCAATGAGGAAGATTTGACATTCGTTTGCATGGACCTGGTT

Coding sequence (CDS)

TTCATCGGCTCGAGTGAACTGGTGGCCGAACTTCGGGCGGCAGATTTCAAGAGGACCGGAGAGCGCGATTGCAGAACCAAATATGCAGATGCGAATGGCGCATTCCCAAATCTCAATGAGGAAGATTTGACATTCGTTTGCATGGACCTGGTT

Protein sequence

FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV

Homology

[Close]

BLAST of MC01g0716.1 vs. ExPASy Swiss-Prot
Match: Q6Z4P2 (Probable apyrase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=APY2 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 9.8e-05
Identity = 16/51 (31.37%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 52
           F+     VA+++ +DF++  +R C+    DA  A+P + ++++ ++CMDLV
Sbjct: 372 FVNPKAPVAKVKPSDFEKAAKRACKLNLKDAEAAYPGVQKDNIPYICMDLV 422

[Close]

BLAST of MC01g0716.1 vs. ExPASy Swiss-Prot
Match: Q9SPM5 (Apyrase 2 OS=Arabidopsis thaliana OX=3702 GN=APY2 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 3.7e-04
Identity = 18/51 (35.29%), Postives = 30/51 (58.82%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 52
           F+   + VA +R  DF++  ++ C  K  +    FP + EE+L ++CMDLV
Sbjct: 375 FVDPKQPVATVRPMDFEKAAKKACSMKLEEGKSTFPLVEEENLPYLCMDLV 425

[Close]

BLAST of MC01g0716.1 vs. ExPASy Swiss-Prot
Match: Q8H7L6 (Probable apyrase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=APY1 PE=3 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 6.3e-04
Identity = 16/51 (31.37%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 52
           F+      A+++ +DF+    R C+    DA   +P+++EE++ ++CMDLV
Sbjct: 392 FVNPKAPFAKVKPSDFEEAARRVCKLNVKDAQATYPDVSEENVPYLCMDLV 442

[Close]

BLAST of MC01g0716.1 vs. NCBI nr
Match: XP_031262541.1 (apyrase 2-like [Pistacia vera])

HSP 1 Score: 56.2 bits (134), Expect = 2.15e-07
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 51
           FI S + VA++R ADF+   +R C+T+  DA  AFP++ E +L ++CMDLV
Sbjct: 372 FIDSKQAVAKVRPADFETAAKRACQTRLEDAKSAFPHVEEANLPYICMDLV 422

[Close]

BLAST of MC01g0716.1 vs. NCBI nr
Match: KAG5224191.1 (apyrase family protein [Salix suchowensis])

HSP 1 Score: 55.5 bits (132), Expect = 4.02e-07
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 51
           F+ S++ VA++R  DF+   +R C TK  DA   +P+L+E DL ++CMDLV
Sbjct: 369 FVDSTKPVAKVRPVDFEHAAKRACETKLEDAKSKYPSLDENDLPYICMDLV 419

[Close]

BLAST of MC01g0716.1 vs. NCBI nr
Match: KAF9661148.1 (hypothetical protein SADUNF_Sadunf19G0037600 [Salix dunnii])

HSP 1 Score: 55.5 bits (132), Expect = 4.02e-07
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 51
           F+ S++ VA++R  DF+   +R C TK  DA   +P+L+E DL ++CMDLV
Sbjct: 373 FVDSTKPVAKVRPVDFEHAAKRACETKLEDAKSKYPSLDENDLPYICMDLV 423

[Close]

BLAST of MC01g0716.1 vs. NCBI nr
Match: KAB5512113.1 (hypothetical protein DKX38_029141 [Salix brachista] >KAB5512138.1 hypothetical protein DKX38_029166 [Salix brachista])

HSP 1 Score: 55.5 bits (132), Expect = 4.02e-07
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 51
           F+ S++ VA++R  DF+   +R C TK  DA   +P+L+E DL ++CMDLV
Sbjct: 412 FVDSTKPVAKVRPVDFEHAAKRACETKLEDAKSKYPSLDENDLPYICMDLV 462

[Close]

BLAST of MC01g0716.1 vs. NCBI nr
Match: KAF9827073.1 (hypothetical protein H0E87_028584 [Populus deltoides])

HSP 1 Score: 54.7 bits (130), Expect = 7.51e-07
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMD 49
           F+G++   A   AADFK+   R C+T++ DA   FPN  E+DL F+CMD
Sbjct: 338 FVGANAHTATASAADFKKAARRACKTRFEDARSRFPNALEKDLPFLCMD 386

[Close]

BLAST of MC01g0716.1 vs. ExPASy TrEMBL
Match: A0A5N5J476 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_029141 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.95e-07
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 51
           F+ S++ VA++R  DF+   +R C TK  DA   +P+L+E DL ++CMDLV
Sbjct: 412 FVDSTKPVAKVRPVDFEHAAKRACETKLEDAKSKYPSLDENDLPYICMDLV 462

[Close]

BLAST of MC01g0716.1 vs. ExPASy TrEMBL
Match: A0A0D6R4B1 (Uncharacterized protein OS=Araucaria cunninghamii OX=56994 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.64e-07
Identity = 21/51 (41.18%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 51
           FI SS+ V +++ ADFK+  ++ CRT Y +A   FP++ +  L ++CMDL+
Sbjct: 379 FIDSSKAVVKVKPADFKKAAKKACRTSYENAGNIFPDVEQSQLPYICMDLI 429

[Close]

BLAST of MC01g0716.1 vs. ExPASy TrEMBL
Match: A9PEV4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.98e-07
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMD 49
           F+ ++   A   AADFK+  +R C T++ DA+  FPN  EEDL F+CMD
Sbjct: 354 FVDANAYTATASAADFKKAAKRACETRFEDASSRFPNALEEDLPFLCMD 402

[Close]

BLAST of MC01g0716.1 vs. ExPASy TrEMBL
Match: A0A2K1WNQ1 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G031200 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.98e-07
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMD 49
           F+ ++   A   AADFK+  +R C T++ DA+  FPN  EEDL F+CMD
Sbjct: 377 FVDANAYTATASAADFKKAAKRACETRFEDASSRFPNALEEDLPFLCMD 425

[Close]

BLAST of MC01g0716.1 vs. ExPASy TrEMBL
Match: A0A2K1WNP8 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G031100 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.17e-07
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 1  FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMD 49
          F+ ++   A   AADFK+   R C+T++ DA   FPN  E+DL F+CMD
Sbjct: 19 FVDANAHTATASAADFKKAARRACKTRFEDARSRFPNALEKDLPFLCMD 67

[Close]

BLAST of MC01g0716.1 vs. TAIR 10
Match: AT5G18280.1 (apyrase 2 )

HSP 1 Score: 44.7 bits (104), Expect = 2.6e-05
Identity = 18/51 (35.29%), Postives = 30/51 (58.82%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 52
           F+   + VA +R  DF++  ++ C  K  +    FP + EE+L ++CMDLV
Sbjct: 481 FVDPKQPVATVRPMDFEKAAKKACSMKLEEGKSTFPLVEEENLPYLCMDLV 531

[Close]

BLAST of MC01g0716.1 vs. TAIR 10
Match: AT5G18280.2 (apyrase 2 )

HSP 1 Score: 44.7 bits (104), Expect = 2.6e-05
Identity = 18/51 (35.29%), Postives = 30/51 (58.82%), Query Frame = 0


Query: 1   FIGSSELVAELRAADFKRTGERDCRTKYADANGAFPNLNEEDLTFVCMDLV 52
           F+   + VA +R  DF++  ++ C  K  +    FP + EE+L ++CMDLV
Sbjct: 533 FVDPKQPVATVRPMDFEKAAKKACSMKLEEGKSTFPLVEEENLPYLCMDLV 583

The following BLAST results are available for this feature:

BLAST of MC01g0716.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6Z4P2	9.8e-05	31.37	Probable apyrase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=APY2 PE=2 SV=1	[more]
Q9SPM5	3.7e-04	35.29	Apyrase 2 OS=Arabidopsis thaliana OX=3702 GN=APY2 PE=1 SV=1	[more]
Q8H7L6	6.3e-04	31.37	Probable apyrase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=APY1 PE=3 SV=1	[more]

BLAST of MC01g0716.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031262541.1	2.15e-07	47.06	apyrase 2-like [Pistacia vera]	[more]
KAG5224191.1	4.02e-07	45.10	apyrase family protein [Salix suchowensis]	[more]
KAF9661148.1	4.02e-07	45.10	hypothetical protein SADUNF_Sadunf19G0037600 [Salix dunnii]	[more]
KAB5512113.1	4.02e-07	45.10	hypothetical protein DKX38_029141 [Salix brachista] >KAB5512138.1 hypothetical p...	[more]
KAF9827073.1	7.51e-07	46.94	hypothetical protein H0E87_028584 [Populus deltoides]	[more]

BLAST of MC01g0716.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N5J476	1.95e-07	45.10	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_029141 PE=3 SV=1	[more]
A0A0D6R4B1	3.64e-07	41.18	Uncharacterized protein OS=Araucaria cunninghamii OX=56994 PE=3 SV=1	[more]
A9PEV4	4.98e-07	46.94	Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1	[more]
A0A2K1WNQ1	4.98e-07	46.94	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G031200 PE=3 ...	[more]
A0A2K1WNP8	6.17e-07	44.90	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G031100 PE=3 ...	[more]

BLAST of MC01g0716.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18280.1	2.6e-05	35.29	apyrase 2	[more]
AT5G18280.2	2.6e-05	35.29	apyrase 2	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC01g0716	MC01g0716	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g0716.1-cds	MC01g0716.1-cds-MC01:13285912..13286064	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC01g0716.1	MC01g0716.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides