MC11g0624 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g0624
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 5015255 .. 5015428 (-)
RNA-Seq ExpressionMC11g0624
SyntenyMC11g0624
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGGGATTTCACCGGAGAGGCCGTTATTGGAGAGATTCAGAGAGTTCAGAACGGGAAGAAACCCTAGAGACGAAGGGATTTCGCCGGAGAAGAAATTCTCCGCGAGATTGACGATACTCAGGGAACTACACGAGCCAATCGTCTCTGGAATCGAACCGGAGAATTTATTCCCC

mRNA sequence

GAGGGGATTTCACCGGAGAGGCCGTTATTGGAGAGATTCAGAGAGTTCAGAACGGGAAGAAACCCTAGAGACGAAGGGATTTCGCCGGAGAAGAAATTCTCCGCGAGATTGACGATACTCAGGGAACTACACGAGCCAATCGTCTCTGGAATCGAACCGGAGAATTTATTCCCC

Coding sequence (CDS)

GAGGGGATTTCACCGGAGAGGCCGTTATTGGAGAGATTCAGAGAGTTCAGAACGGGAAGAAACCCTAGAGACGAAGGGATTTCGCCGGAGAAGAAATTCTCCGCGAGATTGACGATACTCAGGGAACTACACGAGCCAATCGTCTCTGGAATCGAACCGGAGAATTTATTCCCC

Protein sequence

EGISPERPLLERFREFRTGRNPRDEGISPEKKFSARLTILRELHEPIVSGIEPENLFP
Homology
BLAST of MC11g0624 vs. ExPASy TrEMBL
Match: A0A0A9DUG3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 8.10e-05
Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 5  PERPLLERFREFRTGRNPRDEGISPEKKFSARLTILRELHEPIVSGIEPENLF 57
          P++ L ER R  R  ++P+D+GI+P +KF       R LH P V GI P +LF
Sbjct: 3  PDKLLWERLRVTRYIKSPKDKGITPVRKFRPNWMFTRALHWPNVPGISPVSLF 55

BLAST of MC11g0624 vs. ExPASy TrEMBL
Match: A0A2H5QEJ8 (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_222630 PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.74e-04
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0

Query: 2   GISPERPLLERFREFRTGRNPRDEGISPEKKFSARLTILRELHEPIVSGIEPENLF 57
           GI+PER LL++F++F+  ++P + GI P     A+    R    PIV GI  E LF
Sbjct: 85  GIAPERLLLDKFKDFKLIKSPTESGIDPCNLLYAKRRYCRSFRLPIVVGITLEKLF 140

BLAST of MC11g0624 vs. ExPASy TrEMBL
Match: A0A5D2VW28 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G142100v1 PE=4 SV=1)

HSP 1 Score: 43.5 bits (101), Expect = 9.20e-04
Identity = 24/52 (46.15%), Postives = 30/52 (57.69%), Query Frame = 0

Query: 2  GISPERPLLERFREFRTGRNPRDEGISPEKKFSARLTILRELHEPIVSGIEP 53
          G SP R LLER R     + P   GI PE+ F+ R+++LR    PI  GIEP
Sbjct: 31 GNSPSRLLLERSRTCNFFKRPISVGILPERLFANRISVLRFRSRPISGGIEP 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A9DUG38.10e-0543.40Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A2H5QEJ86.74e-0441.07Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_222630 PE=4... [more]
A0A5D2VW289.20e-0446.15Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G142100v1 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g0624.1MC11g0624.1mRNA