Tan0003454 (gene) Snake gourd v1

Overview


Name	Tan0003454
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG05: 60816167 .. 60817757 (+)
RNA-Seq Expression	Tan0003454
Synteny	Tan0003454

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAATTCGAACGATGAACAGCGTTCCAGCACACACAGCCATTCCGACCCAACTCCAACAATATACTAATCCGCCTCCTCCAATCCCACTCTCAAACCCAACAAAAATCAACATCCCTCGCTCTCCCAGTTCCTCAAATCGCAATATCTCCTCCAAATCCACCCGCAATTCTATCGACCCCATTGTTCTATGGACCTCTTCTATTGCTCGTTACTGCCGCAACGGCCAATTAGCCGAAGCCGCCACAGAGTTTACGAGGATGAGACTCACCGGAGTTGAGCCGAACCACATCACATTGATTACGCTTCTCTCTGGCTGTGCTGATTTTCCGTCTGACAGCCTTTACTTAGGCTCTTCGCTTCATGGTTACGCTCGTAAATTCGGTTTGGATACAGGACATGTAGTAGTGGGGACTGCTCTAATTGATATGTATGCCAAATGTTCTCAATTGGGTCTTGCTAGGAAGGTTTTTGATTTCCTGGCCATGAAAAACTCTGTCTCTTGGAACACGATGCTCGATGGTTACATGAGGAATGGGGAGGTTGAGTTGGCCATTGACCTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAATGGTCTTTTGAAACAGGGGTACTCTGAACAAGCGTTGGAGTGCTTCCATCAAATGCAATGCTCGGGTATCGAGCCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCATGTGCTGATTTGGGCGCGCTTACTTTGGGGTTATGGGTTAATCGGTTCGTTAACCAGCAGGACTTTAACGATAATATTAGGATAAGTAATTCCTTGATAGATATGTATTCTCGATGTGGATGTATTGAGTTTGCCCATCAAGTGTTTGAGAAAATGCCCAAGCGAACTTTAGTGTCTTGGAACTCCATCATTGTGGGGTTTGCTGCTAATGGGTTTGCAGATGAGTCTCTCGAGTTTTTTGATGCAATGCAGAAGGAAGGATTCAAGCCAGATGGAGTTAGCTACACAGGAGCTCTTACTGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGGCTGGAATTGTTTGATAAGATGAAGAGGGTGCACAGAATTACTCCCAGGATTGAGCATTATGGGTGCATTGTTGACCTCTATGGCCGTGCAGGGAGGTTGGAGGAAGCATTGAATGTGATTGAGAAAATGCCGATGAAACCGAATGAAGTTGTATTGGGGTCGTTGCTGGCTGCCTGTAGGACTCATGGTGATGTGAGCCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTGGATCCGGGAGGCGATTCAAATTACGTGCTCCTCTCGAACATATATGCAGCAATTGGGAAGTGGGAAGGTGCTAATAAGGTGAGGAGAACAATGAAGGCCCGAGGTGTGCAGAAGAAACCAGGGTTTAGTTCAGTTGAGATTGATGGTAAGGTTCACGAGTTTGTTGCTGGTGACAAATACCATGCTGATGCAGAGAGTATTTACTCGATGTTAGAGCTGTTGTTTCATGAACTAAAGATATGTGGCTATGTTCCTGAAACTGATGCCTTTCTGAATATTAAAGAATCTAGTAAAGACCGTTGA

mRNA sequence

TGGAATTCGAACGATGAACAGCGTTCCAGCACACACAGCCATTCCGACCCAACTCCAACAATATACTAATCCGCCTCCTCCAATCCCACTCTCAAACCCAACAAAAATCAACATCCCTCGCTCTCCCAGTTCCTCAAATCGCAATATCTCCTCCAAATCCACCCGCAATTCTATCGACCCCATTGTTCTATGGACCTCTTCTATTGCTCGTTACTGCCGCAACGGCCAATTAGCCGAAGCCGCCACAGAGTTTACGAGGATGAGACTCACCGGAGTTGAGCCGAACCACATCACATTGATTACGCTTCTCTCTGGCTGTGCTGATTTTCCGTCTGACAGCCTTTACTTAGGCTCTTCGCTTCATGGTTACGCTCGTAAATTCGGTTTGGATACAGGACATGTAGTAGTGGGGACTGCTCTAATTGATATGTATGCCAAATGTTCTCAATTGGGTCTTGCTAGGAAGGTTTTTGATTTCCTGGCCATGAAAAACTCTGTCTCTTGGAACACGATGCTCGATGGTTACATGAGGAATGGGGAGGTTGAGTTGGCCATTGACCTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAATGGTCTTTTGAAACAGGGGTACTCTGAACAAGCGTTGGAGTGCTTCCATCAAATGCAATGCTCGGGTATCGAGCCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCATGTGCTGATTTGGGCGCGCTTACTTTGGGGTTATGGGTTAATCGGTTCGTTAACCAGCAGGACTTTAACGATAATATTAGGATAAGTAATTCCTTGATAGATATGTATTCTCGATGTGGATGTATTGAGTTTGCCCATCAAGTGTTTGAGAAAATGCCCAAGCGAACTTTAGTGTCTTGGAACTCCATCATTGTGGGGTTTGCTGCTAATGGGTTTGCAGATGAGTCTCTCGAGTTTTTTGATGCAATGCAGAAGGAAGGATTCAAGCCAGATGGAGTTAGCTACACAGGAGCTCTTACTGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGGCTGGAATTGTTTGATAAGATGAAGAGGGTGCACAGAATTACTCCCAGGATTGAGCATTATGGGTGCATTGTTGACCTCTATGGCCGTGCAGGGAGGTTGGAGGAAGCATTGAATGTGATTGAGAAAATGCCGATGAAACCGAATGAAGTTGTATTGGGGTCGTTGCTGGCTGCCTGTAGGACTCATGGTGATGTGAGCCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTGGATCCGGGAGGCGATTCAAATTACGTGCTCCTCTCGAACATATATGCAGCAATTGGGAAGTGGGAAGGTGCTAATAAGGTGAGGAGAACAATGAAGGCCCGAGGTGTGCAGAAGAAACCAGGGTTTAGTTCAGTTGAGATTGATGGTAAGGTTCACGAGTTTGTTGCTGGTGACAAATACCATGCTGATGCAGAGAGTATTTACTCGATGTTAGAGCTGTTGTTTCATGAACTAAAGATATGTGGCTATGTTCCTGAAACTGATGCCTTTCTGAATATTAAAGAATCTAGTAAAGACCGTTGA

Coding sequence (CDS)

ATGAACAGCGTTCCAGCACACACAGCCATTCCGACCCAACTCCAACAATATACTAATCCGCCTCCTCCAATCCCACTCTCAAACCCAACAAAAATCAACATCCCTCGCTCTCCCAGTTCCTCAAATCGCAATATCTCCTCCAAATCCACCCGCAATTCTATCGACCCCATTGTTCTATGGACCTCTTCTATTGCTCGTTACTGCCGCAACGGCCAATTAGCCGAAGCCGCCACAGAGTTTACGAGGATGAGACTCACCGGAGTTGAGCCGAACCACATCACATTGATTACGCTTCTCTCTGGCTGTGCTGATTTTCCGTCTGACAGCCTTTACTTAGGCTCTTCGCTTCATGGTTACGCTCGTAAATTCGGTTTGGATACAGGACATGTAGTAGTGGGGACTGCTCTAATTGATATGTATGCCAAATGTTCTCAATTGGGTCTTGCTAGGAAGGTTTTTGATTTCCTGGCCATGAAAAACTCTGTCTCTTGGAACACGATGCTCGATGGTTACATGAGGAATGGGGAGGTTGAGTTGGCCATTGACCTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAATGGTCTTTTGAAACAGGGGTACTCTGAACAAGCGTTGGAGTGCTTCCATCAAATGCAATGCTCGGGTATCGAGCCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCATGTGCTGATTTGGGCGCGCTTACTTTGGGGTTATGGGTTAATCGGTTCGTTAACCAGCAGGACTTTAACGATAATATTAGGATAAGTAATTCCTTGATAGATATGTATTCTCGATGTGGATGTATTGAGTTTGCCCATCAAGTGTTTGAGAAAATGCCCAAGCGAACTTTAGTGTCTTGGAACTCCATCATTGTGGGGTTTGCTGCTAATGGGTTTGCAGATGAGTCTCTCGAGTTTTTTGATGCAATGCAGAAGGAAGGATTCAAGCCAGATGGAGTTAGCTACACAGGAGCTCTTACTGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGGCTGGAATTGTTTGATAAGATGAAGAGGGTGCACAGAATTACTCCCAGGATTGAGCATTATGGGTGCATTGTTGACCTCTATGGCCGTGCAGGGAGGTTGGAGGAAGCATTGAATGTGATTGAGAAAATGCCGATGAAACCGAATGAAGTTGTATTGGGGTCGTTGCTGGCTGCCTGTAGGACTCATGGTGATGTGAGCCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTGGATCCGGGAGGCGATTCAAATTACGTGCTCCTCTCGAACATATATGCAGCAATTGGGAAGTGGGAAGGTGCTAATAAGGTGAGGAGAACAATGAAGGCCCGAGGTGTGCAGAAGAAACCAGGGTTTAGTTCAGTTGAGATTGATGGTAAGGTTCACGAGTTTGTTGCTGGTGACAAATACCATGCTGATGCAGAGAGTATTTACTCGATGTTAGAGCTGTTGTTTCATGAACTAAAGATATGTGGCTATGTTCCTGAAACTGATGCCTTTCTGAATATTAAAGAATCTAGTAAAGACCGTTGA

Protein sequence

MNSVPAHTAIPTQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIVLWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSIIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKDR

Homology

[Close]

BLAST of Tan0003454 vs. ExPASy Swiss-Prot
Match: Q9MA50 (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE247 PE=2 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 1.9e-167
Identity = 294/494 (59.51%), Postives = 367/494 (74.29%), Query Frame = 0


Query: 22  PPIPLSNPTKINIPR--SPSSSNRNISSKSTRNSIDPIVLWTSSIARYCRNGQLAEAATE 81
           P + +++P  I      +P     N S+  T       V WTS I    RNG+LAEAA E
Sbjct: 5   PVVGITSPALITHKNHANPKIQRHNQSTSET------TVSWTSRINLLTRNGRLAEAAKE 64

Query: 82  FTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYARKFGLDTGHVVVGTALIDM 141
           F+ M L GVEPNHIT I LLSGC DF S S  LG  LHGYA K GLD  HV+VGTA+I M
Sbjct: 65  FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 124

Query: 142 YAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELAIDLFDEMPTRDAISWTALI 201
           Y+K  +   AR VFD++  KNSV+WNTM+DGYMR+G+V+ A  +FD+MP RD ISWTA+I
Sbjct: 125 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 184

Query: 202 NGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADLGALTLGLWVNRFVNQQDFN 261
           NG +K+GY E+AL  F +MQ SG++PDYV+IIA L AC +LGAL+ GLWV+R+V  QDF 
Sbjct: 185 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 244

Query: 262 DNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSIIVGFAANGFADESLEFFDAM 321
           +N+R+SNSLID+Y RCGC+EFA QVF  M KRT+VSWNS+IVGFAANG A ESL +F  M
Sbjct: 245 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 304

Query: 322 QKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRITPRIEHYGCIVDLYGRAGR 381
           Q++GFKPD V++TGALTACSH GLV +GL  F  MK  +RI+PRIEHYGC+VDLY RAGR
Sbjct: 305 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 364

Query: 382 LEEALNVIEKMPMKPNEVVLGSLLAACRTHG-DVSLAERLMKHLFKLDPGGDSNYVLLSN 441
           LE+AL +++ MPMKPNEVV+GSLLAAC  HG ++ LAERLMKHL  L+    SNYV+LSN
Sbjct: 365 LEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN 424

Query: 442 IYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVAGDKYHADAESIYSMLEL 501
           +YAA GKWEGA+K+RR MK  G++K+PGFSS+EID  +H F+AGD  H +   I  +LEL
Sbjct: 425 MYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLEL 484

Query: 502 LFHELKICGYVPET 513
           +  +L++ G V ET
Sbjct: 485 ISSDLRLQGCVVET 492

[Close]

BLAST of Tan0003454 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.3e-104
Identity = 184/467 (39.40%), Postives = 291/467 (62.31%), Query Frame = 0


Query: 59  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 118
           L  +  + Y R G   EA   F  M  +GV P+ I++++ +S C+     ++  G S HG
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHG 363

Query: 119 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 178
           Y  + G ++   +   ALIDMY KC +   A ++FD ++ K  V+WN+++ GY+ NGEV+
Sbjct: 364 YVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 423

Query: 179 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQC-SGIEPDYVSIIAVLAAC 238
            A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ   G+  D V+++++ +AC
Sbjct: 424 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 483

Query: 239 ADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWN 298
             LGAL L  W+  ++ +     ++R+  +L+DM+SRCG  E A  +F  +  R + +W 
Sbjct: 484 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 543

Query: 299 SIIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRV 358
           + I   A  G A+ ++E FD M ++G KPDGV++ GALTACSH GLV +G E+F  M ++
Sbjct: 544 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 603

Query: 359 HRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAER 418
           H ++P   HYGC+VDL GRAG LEEA+ +IE MPM+PN+V+  SLLAACR  G+V +A  
Sbjct: 604 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 663

Query: 419 LMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVH 478
             + +  L P    +YVLLSN+YA+ G+W    KVR +MK +G++K PG SS++I GK H
Sbjct: 664 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 723

Query: 479 EFVAGDKYHADAESIYSMLELLFHELKICGYVPE-TDAFLNIKESSK 524
           EF +GD+ H +  +I +ML+ +       G+VP+ ++  +++ E  K
Sbjct: 724 EFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

[Close]

BLAST of Tan0003454 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 373.2 bits (957), Expect = 4.7e-102
Identity = 174/466 (37.34%), Postives = 277/466 (59.44%), Query Frame = 0


Query: 51  RNSIDPIVLWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSL 110
           R   + +  W   I+ Y R  +  E+      M    V P  +TL+ +LS C+      L
Sbjct: 195 RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254

Query: 111 YLGSSLHGYARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDG 170
                +H Y  +   +   + +  AL++ YA C ++ +A ++F  +  ++ +SW +++ G
Sbjct: 255 C--KRVHEYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 314

Query: 171 YMRNGEVELAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSI 230
           Y+  G ++LA   FD+MP RD ISWT +I+G L+ G   ++LE F +MQ +G+ PD  ++
Sbjct: 315 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 374

Query: 231 IAVLAACADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPK 290
           ++VL ACA LG+L +G W+  ++++    +++ + N+LIDMY +CGC E A +VF  M +
Sbjct: 375 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 434

Query: 291 RTLVSWNSIIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLEL 350
           R   +W +++VG A NG   E+++ F  MQ    +PD ++Y G L+AC+H+G+V++  + 
Sbjct: 435 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 494

Query: 351 FDKMKRVHRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHG 410
           F KM+  HRI P + HYGC+VD+ GRAG ++EA  ++ KMPM PN +V G+LL A R H 
Sbjct: 495 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN 554

Query: 411 DVSLAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSV 470
           D  +AE   K + +L+P   + Y LL NIYA   +W+   +VRR +    ++K PGFS +
Sbjct: 555 DEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 614

Query: 471 EIDGKVHEFVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFL 517
           E++G  HEFVAGDK H  +E IY  LE L  E     Y+P+T   L
Sbjct: 615 EVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657

[Close]

BLAST of Tan0003454 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 6.8e-101
Identity = 185/477 (38.78%), Postives = 292/477 (61.22%), Query Frame = 0


Query: 53  SIDP-IVLWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLY 112
           +IDP + L+T++I     NG   +A   + ++  + + PN  T  +LL  C      S  
Sbjct: 90  TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC------STK 149

Query: 113 LGSSLHGYARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGY 172
            G  +H +  KFGL      V T L+D+YAK   +  A+KVFD +  ++ VS   M+  Y
Sbjct: 150 SGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 209

Query: 173 MRNGEVELAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSG-IEPDYVSI 232
            + G VE A  LFD M  RD +SW  +I+G  + G+   AL  F ++   G  +PD +++
Sbjct: 210 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 269

Query: 233 IAVLAACADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPK 292
           +A L+AC+ +GAL  G W++ FV       N+++   LIDMYS+CG +E A  VF   P+
Sbjct: 270 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 329

Query: 293 RTLVSWNSIIVGFAANGFADESLEFFDAMQK-EGFKPDGVSYTGALTACSHAGLVNKGLE 352
           + +V+WN++I G+A +G++ ++L  F+ MQ   G +P  +++ G L AC+HAGLVN+G+ 
Sbjct: 330 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 389

Query: 353 LFDKMKRVHRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTH 412
           +F+ M + + I P+IEHYGC+V L GRAG+L+ A   I+ M M  + V+  S+L +C+ H
Sbjct: 390 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 449

Query: 413 GDVSLAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSS 472
           GD  L + + ++L  L+      YVLLSNIYA++G +EG  KVR  MK +G+ K+PG S+
Sbjct: 450 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 509

Query: 473 VEIDGKVHEFVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFL-NIKESSKDR 526
           +EI+ KVHEF AGD+ H+ ++ IY+ML  +   +K  GYVP T+  L +++E+ K++
Sbjct: 510 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQ 559

[Close]

BLAST of Tan0003454 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 8.9e-101
Identity = 173/468 (36.97%), Postives = 290/468 (61.97%), Query Frame = 0


Query: 57  IVLWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSL 116
           +V W S I  + + G   +A   F +M    V+ +H+T++ +LS CA     +L  G  +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQV 256

Query: 117 HGYARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGE 176
             Y  +  ++  ++ +  A++DMY KC  +  A+++FD +  K++V+W TMLDGY  + +
Sbjct: 257 CSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 177 VELAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQC-SGIEPDYVSIIAVLA 236
            E A ++ + MP +D ++W ALI+   + G   +AL  FH++Q    ++ + +++++ L+
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 237 ACADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVS 296
           ACA +GAL LG W++ ++ +     N  ++++LI MYS+CG +E + +VF  + KR +  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 297 WNSIIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMK 356
           W+++I G A +G  +E+++ F  MQ+   KP+GV++T    ACSH GLV++   LF +M+
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 357 RVHRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLA 416
             + I P  +HY CIVD+ GR+G LE+A+  IE MP+ P+  V G+LL AC+ H +++LA
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 417 ERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGK 476
           E     L +L+P  D  +VLLSNIYA +GKWE  +++R+ M+  G++K+PG SS+EIDG 
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 477 VHEFVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSK 524
           +HEF++GD  H  +E +Y  L  +  +LK  GY PE    L I E  +
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661

[Close]

BLAST of Tan0003454 vs. NCBI nr
Match: XP_038877228.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa hispida])

HSP 1 Score: 951.8 bits (2459), Expect = 2.4e-273
Identity = 461/524 (87.98%), Postives = 493/524 (94.08%), Query Frame = 0


Query: 1   MNSVPAHTAIPTQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIVLW 60
           M+S P++TAIP+QLQQY NPP  IPLSNPTK+N PRSP+SS+RNISSK   NSIDPIVLW
Sbjct: 1   MSSSPSYTAIPSQLQQYPNPPSSIPLSNPTKLNFPRSPNSSHRNISSKFPANSIDPIVLW 60

Query: 61  TSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYA 120
           TSS+ARYCRNGQL+EAATEFTRMRL GVEPNH+T ITLLSGC DFPS+SL+ GSSLHGYA
Sbjct: 61  TSSLARYCRNGQLSEAATEFTRMRLAGVEPNHVTFITLLSGCTDFPSESLFFGSSLHGYA 120

Query: 121 RKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELA 180
           RK GLDTGHV+VGTAL+DMYAKC+Q  LARKVFD+L MKNSV+WNTMLDGY RNGE+ELA
Sbjct: 121 RKLGLDTGHVMVGTALVDMYAKCAQSRLARKVFDYLGMKNSVTWNTMLDGYTRNGEIELA 180

Query: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
           IDLFDEMPTRDAISWTALINGLLKQG+SEQALECFHQMQCSGIEPDYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGFSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240

Query: 241 GALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSII 300
           GALTLGLWVNRFV QQ+F DNIRISNSL+DMYSRCGCIEFA QVFEKMPKRTLVSWNSII
Sbjct: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLVDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300

Query: 301 VGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRI 360
           VGFA NGFADESLEFFDAMQ EGFKPDGVSYTGALTACSHAGLVNKGLELFD MKR+H+I
Sbjct: 301 VGFAVNGFADESLEFFDAMQNEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRIHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
           TPRIEHYGCIVDLYGRAGRLE+ALNVIE+MPMKPNEVVLGSLLAACRT+GDVSLAE+LMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTYGDVSLAEKLMK 420

Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
           HL KLDP GDSNYVLLSNIYAAIG+WEGANKVRRTMKARGVQKKPG SSVEIDGKVHEFV
Sbjct: 421 HLSKLDPRGDSNYVLLSNIYAAIGRWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480

Query: 481 AGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           AGDKYHADA++IYSMLELLFHELKI GYVP+T+  LN KE SKD
Sbjct: 481 AGDKYHADADNIYSMLELLFHELKIYGYVPDTNIILNTKEFSKD 524

[Close]

BLAST of Tan0003454 vs. NCBI nr
Match: XP_022142716.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica charantia])

HSP 1 Score: 950.7 bits (2456), Expect = 5.4e-273
Identity = 465/524 (88.74%), Postives = 489/524 (93.32%), Query Frame = 0


Query: 1   MNSVPAHTAIPTQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIVLW 60
           M+S+PA+TA   QLQQY NP   IPL NP  IN PRS +SSNR+ISSKST NSIDPIVLW
Sbjct: 1   MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60

Query: 61  TSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYA 120
           TSSIARYCRNGQLAEAA EFT MRL GVEPNH+TLITLLSGCADFPS+SLY GSSLHGYA
Sbjct: 61  TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120

Query: 121 RKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELA 180
           RK GLDT HV+VGT+++DMYAKC+QLGLAR+VFD+L MKNSVSWNTMLDGY RNGE+ELA
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180

Query: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
           IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGI+PDYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240

Query: 241 GALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSII 300
           G LTLGLWVNRFV QQ+F DNIRISNSLIDMYSRCGCI FA QVFE+M KRTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300

Query: 301 VGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRI 360
           VG+AANGFADESLEFFDAMQKEGFKPD VSYTGALTACSHAGLVNKGLELFD MKRVHRI
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
            PRIEHYGCIVDLYGRAGRLE+AL+VIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420

Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
           HL KLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480

Query: 481 AGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           AGDKYHADA+SIYSML+LL HELKICG VPET+ FLN KESSKD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524

[Close]

BLAST of Tan0003454 vs. NCBI nr
Match: XP_022967078.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita maxima])

HSP 1 Score: 904.8 bits (2337), Expect = 3.4e-259
Identity = 442/526 (84.03%), Postives = 477/526 (90.68%), Query Frame = 0


Query: 1   MNSVPAHTAIP--TQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIV 60
           M+SVP+HT IP   QLQQY+NPP PIP SNP+ ++ PR+P+SS          N I PIV
Sbjct: 1   MSSVPSHTGIPFQFQLQQYSNPPSPIPHSNPSNLSFPRTPNSS----------NPIKPIV 60

Query: 61  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 120
           LWTSSIARYCRN QLAEAA EFTRMRL GVEPNHIT ITLLSGCADFPS SL+ G+SLHG
Sbjct: 61  LWTSSIARYCRNAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120

Query: 121 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 180
           Y RK GLDTGHV+VGTALI MYAKC+QLGLAR VFD+LAMKNSV+WNTMLDGYMRNGE+E
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLAMKNSVTWNTMLDGYMRNGEIE 180

Query: 181 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACA 240
           LAI+LFDEMPTRDAISWTALING LKQGYSEQALECFH+MQCSGIEPDYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACA 240

Query: 241 DLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNS 300
           DLGAL+ GLWVNRF+ QQ+F DNIRISNSLIDMYSRCGCIEFA QVF+KM K TLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMSKHTLVSWNS 300

Query: 301 IIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVH 360
           +IVGFA NGFADESLEFFDAMQKEGF  DGVSYTGALTACSHAGLVNKGLELFD MKRVH
Sbjct: 301 MIVGFAINGFADESLEFFDAMQKEGFMADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360

Query: 361 RITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERL 420
           RITPRIEHYGCIVDLY RAGRL+EALNVIE MPMKPNEVVLGSLLAACRTHGDVSLAERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420

Query: 421 MKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHE 480
           +K+LF+LDPGGDS+YVLLSNIYAA+G+WEGANKVRRTMKARGVQKKPGFSS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHE 480

Query: 481 FVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           FVAGDKYH DA++IYSMLE+LFHELKI GYVPET  F+N  ESSK+
Sbjct: 481 FVAGDKYHVDADNIYSMLEVLFHELKIYGYVPETATFMNGNESSKE 516

[Close]

BLAST of Tan0003454 vs. NCBI nr
Match: KAG7012718.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 899.8 bits (2324), Expect = 1.1e-257
Identity = 441/526 (83.84%), Postives = 475/526 (90.30%), Query Frame = 0


Query: 1   MNSVPAHTAIP--TQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIV 60
           M+SVPAHTAIP   QLQQY+N       SNP+ +N PR P+SS          N I PIV
Sbjct: 1   MSSVPAHTAIPFQFQLQQYSN-------SNPSNLNFPRYPNSS----------NPIKPIV 60

Query: 61  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 120
           LWTSSIARYCRN QLAEAA EFTRMRL GVEPNHIT ITLLSGCADFPS SL+ G+SLHG
Sbjct: 61  LWTSSIARYCRNAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120

Query: 121 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 180
           Y RK GLDTGHV+VGTALI MYAKC+QLGLAR VFD+L MKNSV+WNTMLDGYMRNGE+E
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIE 180

Query: 181 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACA 240
           LAI+LFDEMPTRDAISWTALING LKQGYSEQAL+CFH+MQCSGIEPDYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALDCFHEMQCSGIEPDYVSIIAVLAACA 240

Query: 241 DLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNS 300
           DLGAL+ GLWVNRF+ QQ+F DNIRISNSLIDMYSRCGCIEF+ QVF+KMPKRTLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFSRQVFDKMPKRTLVSWNS 300

Query: 301 IIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVH 360
           +IVGFA NGFADESLEFFDAMQKEGFK DGVSYTGALTACSHAGLVNKGLELFD MKRVH
Sbjct: 301 MIVGFAINGFADESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360

Query: 361 RITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERL 420
           RITPRIEHYGCIVDLY RAGRL+EALNVIE MPMKPNEVVLGSLLAACRTHGDVSLAERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420

Query: 421 MKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHE 480
           +K+LF+LDPGGDS+YVLLSNIYAA+G+WEGAN VRRTMKARGVQKKPGFSS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANMVRRTMKARGVQKKPGFSSIEIDGKVHE 480

Query: 481 FVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           FVAGDKYHADA++IYSMLE+LFHELKICGYVPET  F+N  ESSK+
Sbjct: 481 FVAGDKYHADADNIYSMLEVLFHELKICGYVPETATFMNGNESSKE 509

[Close]

BLAST of Tan0003454 vs. NCBI nr
Match: XP_022945035.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita moschata])

HSP 1 Score: 899.4 bits (2323), Expect = 1.4e-257
Identity = 441/526 (83.84%), Postives = 474/526 (90.11%), Query Frame = 0


Query: 1   MNSVPAHTAIP--TQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIV 60
           M+SVPAHTAIP   QLQQY+N       SNP+ +N PR P+SS          N I PIV
Sbjct: 1   MSSVPAHTAIPFQFQLQQYSN-------SNPSNLNFPRYPNSS----------NPIKPIV 60

Query: 61  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 120
           LWTSSIARYCRN QL EAA EFTRMRL GVEPNHIT ITLLSGCADFPS SL+ G+SLHG
Sbjct: 61  LWTSSIARYCRNAQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120

Query: 121 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 180
           Y RK GLDTGHV+VGTALI MYAKC+QLGLAR VFD+L MKNSV+WNTMLDGYMRNGE+E
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIE 180

Query: 181 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACA 240
           LAI+LFDEMPTRDAISWTALING LKQGYSEQAL+CFH+MQCSGIEPDYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALDCFHEMQCSGIEPDYVSIIAVLAACA 240

Query: 241 DLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNS 300
           DLGAL+ GLWVNRF+ QQ+F DNIRISNSLIDMYSRCGCIEFA QVF+KMPKRTLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMPKRTLVSWNS 300

Query: 301 IIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVH 360
           +IVGFA NGFADESLEFFDAMQKEGFK DGVSYTGALTACSHAGLVNKGLELFD MKRVH
Sbjct: 301 MIVGFATNGFADESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360

Query: 361 RITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERL 420
           RITPRIEHYGCIVDLY RAGRL+EALNVIE MPMKPNEVVLGSLLAACRTHGDVSLAERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420

Query: 421 MKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHE 480
           +K+LF+LDPGGDS+YVLLSNIYAA+G+WEGAN VRRTMKARGVQKKPGFSS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANMVRRTMKARGVQKKPGFSSIEIDGKVHE 480

Query: 481 FVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           FVAGDKYHADA++IYSMLE+LFHELKICGYVPET  F+N  ESSK+
Sbjct: 481 FVAGDKYHADADNIYSMLEVLFHELKICGYVPETATFMNGNESSKE 509

[Close]

BLAST of Tan0003454 vs. ExPASy TrEMBL
Match: A0A6J1CN07 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012760 PE=4 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 2.6e-273
Identity = 465/524 (88.74%), Postives = 489/524 (93.32%), Query Frame = 0


Query: 1   MNSVPAHTAIPTQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIVLW 60
           M+S+PA+TA   QLQQY NP   IPL NP  IN PRS +SSNR+ISSKST NSIDPIVLW
Sbjct: 1   MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60

Query: 61  TSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYA 120
           TSSIARYCRNGQLAEAA EFT MRL GVEPNH+TLITLLSGCADFPS+SLY GSSLHGYA
Sbjct: 61  TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120

Query: 121 RKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELA 180
           RK GLDT HV+VGT+++DMYAKC+QLGLAR+VFD+L MKNSVSWNTMLDGY RNGE+ELA
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180

Query: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
           IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGI+PDYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240

Query: 241 GALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSII 300
           G LTLGLWVNRFV QQ+F DNIRISNSLIDMYSRCGCI FA QVFE+M KRTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300

Query: 301 VGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRI 360
           VG+AANGFADESLEFFDAMQKEGFKPD VSYTGALTACSHAGLVNKGLELFD MKRVHRI
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
            PRIEHYGCIVDLYGRAGRLE+AL+VIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420

Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
           HL KLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480

Query: 481 AGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           AGDKYHADA+SIYSML+LL HELKICG VPET+ FLN KESSKD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524

[Close]

BLAST of Tan0003454 vs. ExPASy TrEMBL
Match: A0A6J1HU31 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466586 PE=4 SV=1)

HSP 1 Score: 904.8 bits (2337), Expect = 1.7e-259
Identity = 442/526 (84.03%), Postives = 477/526 (90.68%), Query Frame = 0


Query: 1   MNSVPAHTAIP--TQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIV 60
           M+SVP+HT IP   QLQQY+NPP PIP SNP+ ++ PR+P+SS          N I PIV
Sbjct: 1   MSSVPSHTGIPFQFQLQQYSNPPSPIPHSNPSNLSFPRTPNSS----------NPIKPIV 60

Query: 61  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 120
           LWTSSIARYCRN QLAEAA EFTRMRL GVEPNHIT ITLLSGCADFPS SL+ G+SLHG
Sbjct: 61  LWTSSIARYCRNAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120

Query: 121 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 180
           Y RK GLDTGHV+VGTALI MYAKC+QLGLAR VFD+LAMKNSV+WNTMLDGYMRNGE+E
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLAMKNSVTWNTMLDGYMRNGEIE 180

Query: 181 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACA 240
           LAI+LFDEMPTRDAISWTALING LKQGYSEQALECFH+MQCSGIEPDYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACA 240

Query: 241 DLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNS 300
           DLGAL+ GLWVNRF+ QQ+F DNIRISNSLIDMYSRCGCIEFA QVF+KM K TLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMSKHTLVSWNS 300

Query: 301 IIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVH 360
           +IVGFA NGFADESLEFFDAMQKEGF  DGVSYTGALTACSHAGLVNKGLELFD MKRVH
Sbjct: 301 MIVGFAINGFADESLEFFDAMQKEGFMADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360

Query: 361 RITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERL 420
           RITPRIEHYGCIVDLY RAGRL+EALNVIE MPMKPNEVVLGSLLAACRTHGDVSLAERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420

Query: 421 MKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHE 480
           +K+LF+LDPGGDS+YVLLSNIYAA+G+WEGANKVRRTMKARGVQKKPGFSS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHE 480

Query: 481 FVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           FVAGDKYH DA++IYSMLE+LFHELKI GYVPET  F+N  ESSK+
Sbjct: 481 FVAGDKYHVDADNIYSMLEVLFHELKIYGYVPETATFMNGNESSKE 516

[Close]

BLAST of Tan0003454 vs. ExPASy TrEMBL
Match: A0A6J1FZR8 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449396 PE=4 SV=1)

HSP 1 Score: 899.4 bits (2323), Expect = 7.0e-258
Identity = 441/526 (83.84%), Postives = 474/526 (90.11%), Query Frame = 0


Query: 1   MNSVPAHTAIP--TQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIV 60
           M+SVPAHTAIP   QLQQY+N       SNP+ +N PR P+SS          N I PIV
Sbjct: 1   MSSVPAHTAIPFQFQLQQYSN-------SNPSNLNFPRYPNSS----------NPIKPIV 60

Query: 61  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 120
           LWTSSIARYCRN QL EAA EFTRMRL GVEPNHIT ITLLSGCADFPS SL+ G+SLHG
Sbjct: 61  LWTSSIARYCRNAQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120

Query: 121 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 180
           Y RK GLDTGHV+VGTALI MYAKC+QLGLAR VFD+L MKNSV+WNTMLDGYMRNGE+E
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIE 180

Query: 181 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACA 240
           LAI+LFDEMPTRDAISWTALING LKQGYSEQAL+CFH+MQCSGIEPDYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALDCFHEMQCSGIEPDYVSIIAVLAACA 240

Query: 241 DLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNS 300
           DLGAL+ GLWVNRF+ QQ+F DNIRISNSLIDMYSRCGCIEFA QVF+KMPKRTLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMPKRTLVSWNS 300

Query: 301 IIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVH 360
           +IVGFA NGFADESLEFFDAMQKEGFK DGVSYTGALTACSHAGLVNKGLELFD MKRVH
Sbjct: 301 MIVGFATNGFADESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360

Query: 361 RITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERL 420
           RITPRIEHYGCIVDLY RAGRL+EALNVIE MPMKPNEVVLGSLLAACRTHGDVSLAERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420

Query: 421 MKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHE 480
           +K+LF+LDPGGDS+YVLLSNIYAA+G+WEGAN VRRTMKARGVQKKPGFSS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANMVRRTMKARGVQKKPGFSSIEIDGKVHE 480

Query: 481 FVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           FVAGDKYHADA++IYSMLE+LFHELKICGYVPET  F+N  ESSK+
Sbjct: 481 FVAGDKYHADADNIYSMLEVLFHELKICGYVPETATFMNGNESSKE 509

[Close]

BLAST of Tan0003454 vs. ExPASy TrEMBL
Match: A0A0A0LYD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 7.7e-257
Identity = 437/524 (83.40%), Postives = 475/524 (90.65%), Query Frame = 0


Query: 1   MNSVPAHTAIPTQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIVLW 60
           M+S+P+HTA P+QLQ     P  IPLSNPTK+N PRSP+S +RNISSK   NS+DPIVLW
Sbjct: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60

Query: 61  TSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYA 120
           TSS+ARYCRNGQL+EAA EFTRMRL GVEPNHIT ITLLS CADFPS+S +  SSLHGYA
Sbjct: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120

Query: 121 RKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELA 180
            K+GLDTGHV+VGTALIDMY+KC+QLG ARKVF  L +KNSVSWNTML+G+MRNGE+ELA
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
           I LFDEMPTRDAISWTALINGLLK GYSEQALECFHQMQ SG+  DYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSII 300
           GALTLGLWV+RFV  Q+F DNI+ISNSLIDMYSRCGCIEFA QVF KM KRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRI 360
           VGFA NGFADESLEFF AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFD MK VH+I
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
           TPRIEHYGCIVDLYGRAGRLE+ALN+IE+MPMKPNEVVLGSLLAACRTHGDV+LAERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420

Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
           HLFKLDP GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKKPG+SSVEIDGKVHEFV
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480

Query: 481 AGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           AGD YHADA++IYSML+LL HELK+CGYVP +D  LN KES+KD
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524

[Close]

BLAST of Tan0003454 vs. ExPASy TrEMBL
Match: A0A5A7UJB6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G002000 PE=4 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 1.7e-256
Identity = 442/524 (84.35%), Postives = 474/524 (90.46%), Query Frame = 0


Query: 1   MNSVPAHTAIPTQLQQYTNPPPPIPLSNPTKINIPRSPSSSNRNISSKSTRNSIDPIVLW 60
           M+S+P+H A P+QLQQ   P   IPLSNPTK+N PRSP S + NI SK T NS+ PIV W
Sbjct: 1   MSSIPSHIASPSQLQQ--PPSSSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60

Query: 61  TSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYA 120
           TSSIARYC NGQL EAA EFTRMRL GVEPNHIT ITLLSGCADFPS+S +  SSLHGYA
Sbjct: 61  TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSES-FFASSLHGYA 120

Query: 121 RKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELA 180
            KFGLDTGHV+VGTALIDMY+KCSQLGLA+KVFD+L +KNSVSWNTML+G+MRNGE+ELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
           I LFDEMPTRDAISWTALINGLLK GYSEQALECFHQMQ SG+  DYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSII 300
           GALT GLWVNRFV QQ+F DN+RISNSLIDMYSRCGCIEFA QVF KM KRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRI 360
           VGFA NGFADESLEFF AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFD MKRVH+I
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
           TP IEHYGCIVDLYGRAGRLE+A NVIE+MPMKPNEVVLGSLLAACRTHGDV LAERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420

Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
           H+FKLD  GDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKK G+SSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480

Query: 481 AGDKYHADAESIYSMLELLFHELKICGYVPETDAFLNIKESSKD 525
           AGDKYHADA++IYSML+LLFHELK+CGYVP+TD  LN K+S+KD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521

[Close]

BLAST of Tan0003454 vs. TAIR 10
Match: AT1G05750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 590.5 bits (1521), Expect = 1.3e-168
Identity = 294/494 (59.51%), Postives = 367/494 (74.29%), Query Frame = 0


Query: 22  PPIPLSNPTKINIPR--SPSSSNRNISSKSTRNSIDPIVLWTSSIARYCRNGQLAEAATE 81
           P + +++P  I      +P     N S+  T       V WTS I    RNG+LAEAA E
Sbjct: 5   PVVGITSPALITHKNHANPKIQRHNQSTSET------TVSWTSRINLLTRNGRLAEAAKE 64

Query: 82  FTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHGYARKFGLDTGHVVVGTALIDM 141
           F+ M L GVEPNHIT I LLSGC DF S S  LG  LHGYA K GLD  HV+VGTA+I M
Sbjct: 65  FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 124

Query: 142 YAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVELAIDLFDEMPTRDAISWTALI 201
           Y+K  +   AR VFD++  KNSV+WNTM+DGYMR+G+V+ A  +FD+MP RD ISWTA+I
Sbjct: 125 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 184

Query: 202 NGLLKQGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADLGALTLGLWVNRFVNQQDFN 261
           NG +K+GY E+AL  F +MQ SG++PDYV+IIA L AC +LGAL+ GLWV+R+V  QDF 
Sbjct: 185 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 244

Query: 262 DNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWNSIIVGFAANGFADESLEFFDAM 321
           +N+R+SNSLID+Y RCGC+EFA QVF  M KRT+VSWNS+IVGFAANG A ESL +F  M
Sbjct: 245 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 304

Query: 322 QKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRVHRITPRIEHYGCIVDLYGRAGR 381
           Q++GFKPD V++TGALTACSH GLV +GL  F  MK  +RI+PRIEHYGC+VDLY RAGR
Sbjct: 305 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 364

Query: 382 LEEALNVIEKMPMKPNEVVLGSLLAACRTHG-DVSLAERLMKHLFKLDPGGDSNYVLLSN 441
           LE+AL +++ MPMKPNEVV+GSLLAAC  HG ++ LAERLMKHL  L+    SNYV+LSN
Sbjct: 365 LEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN 424

Query: 442 IYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVAGDKYHADAESIYSMLEL 501
           +YAA GKWEGA+K+RR MK  G++K+PGFSS+EID  +H F+AGD  H +   I  +LEL
Sbjct: 425 MYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLEL 484

Query: 502 LFHELKICGYVPET 513
           +  +L++ G V ET
Sbjct: 485 ISSDLRLQGCVVET 492

[Close]

BLAST of Tan0003454 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 381.7 bits (979), Expect = 9.4e-106
Identity = 184/467 (39.40%), Postives = 291/467 (62.31%), Query Frame = 0


Query: 59  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 118
           L  +  + Y R G   EA   F  M  +GV P+ I++++ +S C+     ++  G S HG
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHG 363

Query: 119 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 178
           Y  + G ++   +   ALIDMY KC +   A ++FD ++ K  V+WN+++ GY+ NGEV+
Sbjct: 364 YVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 423

Query: 179 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQC-SGIEPDYVSIIAVLAAC 238
            A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ   G+  D V+++++ +AC
Sbjct: 424 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 483

Query: 239 ADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWN 298
             LGAL L  W+  ++ +     ++R+  +L+DM+SRCG  E A  +F  +  R + +W 
Sbjct: 484 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 543

Query: 299 SIIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRV 358
           + I   A  G A+ ++E FD M ++G KPDGV++ GALTACSH GLV +G E+F  M ++
Sbjct: 544 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 603

Query: 359 HRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAER 418
           H ++P   HYGC+VDL GRAG LEEA+ +IE MPM+PN+V+  SLLAACR  G+V +A  
Sbjct: 604 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 663

Query: 419 LMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVH 478
             + +  L P    +YVLLSN+YA+ G+W    KVR +MK +G++K PG SS++I GK H
Sbjct: 664 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 723

Query: 479 EFVAGDKYHADAESIYSMLELLFHELKICGYVPE-TDAFLNIKESSK 524
           EF +GD+ H +  +I +ML+ +       G+VP+ ++  +++ E  K
Sbjct: 724 EFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

[Close]

BLAST of Tan0003454 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 381.7 bits (979), Expect = 9.4e-106
Identity = 184/467 (39.40%), Postives = 291/467 (62.31%), Query Frame = 0


Query: 59  LWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLYLGSSLHG 118
           L  +  + Y R G   EA   F  M  +GV P+ I++++ +S C+     ++  G S HG
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHG 363

Query: 119 YARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGYMRNGEVE 178
           Y  + G ++   +   ALIDMY KC +   A ++FD ++ K  V+WN+++ GY+ NGEV+
Sbjct: 364 YVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 423

Query: 179 LAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQC-SGIEPDYVSIIAVLAAC 238
            A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ   G+  D V+++++ +AC
Sbjct: 424 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 483

Query: 239 ADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPKRTLVSWN 298
             LGAL L  W+  ++ +     ++R+  +L+DM+SRCG  E A  +F  +  R + +W 
Sbjct: 484 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 543

Query: 299 SIIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDKMKRV 358
           + I   A  G A+ ++E FD M ++G KPDGV++ GALTACSH GLV +G E+F  M ++
Sbjct: 544 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 603

Query: 359 HRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHGDVSLAER 418
           H ++P   HYGC+VDL GRAG LEEA+ +IE MPM+PN+V+  SLLAACR  G+V +A  
Sbjct: 604 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 663

Query: 419 LMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVH 478
             + +  L P    +YVLLSN+YA+ G+W    KVR +MK +G++K PG SS++I GK H
Sbjct: 664 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 723

Query: 479 EFVAGDKYHADAESIYSMLELLFHELKICGYVPE-TDAFLNIKESSK 524
           EF +GD+ H +  +I +ML+ +       G+VP+ ++  +++ E  K
Sbjct: 724 EFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

[Close]

BLAST of Tan0003454 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 373.2 bits (957), Expect = 3.3e-103
Identity = 174/466 (37.34%), Postives = 277/466 (59.44%), Query Frame = 0


Query: 51  RNSIDPIVLWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSL 110
           R   + +  W   I+ Y R  +  E+      M    V P  +TL+ +LS C+      L
Sbjct: 195 RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254

Query: 111 YLGSSLHGYARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDG 170
                +H Y  +   +   + +  AL++ YA C ++ +A ++F  +  ++ +SW +++ G
Sbjct: 255 C--KRVHEYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 314

Query: 171 YMRNGEVELAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIEPDYVSI 230
           Y+  G ++LA   FD+MP RD ISWT +I+G L+ G   ++LE F +MQ +G+ PD  ++
Sbjct: 315 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 374

Query: 231 IAVLAACADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPK 290
           ++VL ACA LG+L +G W+  ++++    +++ + N+LIDMY +CGC E A +VF  M +
Sbjct: 375 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 434

Query: 291 RTLVSWNSIIVGFAANGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLEL 350
           R   +W +++VG A NG   E+++ F  MQ    +PD ++Y G L+AC+H+G+V++  + 
Sbjct: 435 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 494

Query: 351 FDKMKRVHRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTHG 410
           F KM+  HRI P + HYGC+VD+ GRAG ++EA  ++ KMPM PN +V G+LL A R H 
Sbjct: 495 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN 554

Query: 411 DVSLAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSV 470
           D  +AE   K + +L+P   + Y LL NIYA   +W+   +VRR +    ++K PGFS +
Sbjct: 555 DEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 614

Query: 471 EIDGKVHEFVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFL 517
           E++G  HEFVAGDK H  +E IY  LE L  E     Y+P+T   L
Sbjct: 615 EVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657

[Close]

BLAST of Tan0003454 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 369.4 bits (947), Expect = 4.8e-102
Identity = 185/477 (38.78%), Postives = 292/477 (61.22%), Query Frame = 0


Query: 53  SIDP-IVLWTSSIARYCRNGQLAEAATEFTRMRLTGVEPNHITLITLLSGCADFPSDSLY 112
           +IDP + L+T++I     NG   +A   + ++  + + PN  T  +LL  C      S  
Sbjct: 90  TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC------STK 149

Query: 113 LGSSLHGYARKFGLDTGHVVVGTALIDMYAKCSQLGLARKVFDFLAMKNSVSWNTMLDGY 172
            G  +H +  KFGL      V T L+D+YAK   +  A+KVFD +  ++ VS   M+  Y
Sbjct: 150 SGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 209

Query: 173 MRNGEVELAIDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSG-IEPDYVSI 232
            + G VE A  LFD M  RD +SW  +I+G  + G+   AL  F ++   G  +PD +++
Sbjct: 210 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 269

Query: 233 IAVLAACADLGALTLGLWVNRFVNQQDFNDNIRISNSLIDMYSRCGCIEFAHQVFEKMPK 292
           +A L+AC+ +GAL  G W++ FV       N+++   LIDMYS+CG +E A  VF   P+
Sbjct: 270 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 329

Query: 293 RTLVSWNSIIVGFAANGFADESLEFFDAMQK-EGFKPDGVSYTGALTACSHAGLVNKGLE 352
           + +V+WN++I G+A +G++ ++L  F+ MQ   G +P  +++ G L AC+HAGLVN+G+ 
Sbjct: 330 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 389

Query: 353 LFDKMKRVHRITPRIEHYGCIVDLYGRAGRLEEALNVIEKMPMKPNEVVLGSLLAACRTH 412
           +F+ M + + I P+IEHYGC+V L GRAG+L+ A   I+ M M  + V+  S+L +C+ H
Sbjct: 390 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 449

Query: 413 GDVSLAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSS 472
           GD  L + + ++L  L+      YVLLSNIYA++G +EG  KVR  MK +G+ K+PG S+
Sbjct: 450 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 509

Query: 473 VEIDGKVHEFVAGDKYHADAESIYSMLELLFHELKICGYVPETDAFL-NIKESSKDR 526
           +EI+ KVHEF AGD+ H+ ++ IY+ML  +   +K  GYVP T+  L +++E+ K++
Sbjct: 510 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQ 559

The following BLAST results are available for this feature:

BLAST of Tan0003454 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA50	1.9e-167	59.51	Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidop...	[more]
Q9LUJ2	1.3e-104	39.40	Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX...	[more]
Q9LSB8	4.7e-102	37.34	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]
Q9SZT8	6.8e-101	38.78	Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t...	[more]
O82380	8.9e-101	36.97	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]

BLAST of Tan0003454 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877228.1	2.4e-273	87.98	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa ...	[more]
XP_022142716.1	5.4e-273	88.74	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica ...	[more]
XP_022967078.1	3.4e-259	84.03	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita ...	[more]
KAG7012718.1	1.1e-257	83.84	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022945035.1	1.4e-257	83.84	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita ...	[more]

BLAST of Tan0003454 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN07	2.6e-273	88.74	pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordic...	[more]
A0A6J1HU31	1.7e-259	84.03	pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbit...	[more]
A0A6J1FZR8	7.0e-258	83.84	pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbit...	[more]
A0A0A0LYD6	7.7e-257	83.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1	[more]
A0A5A7UJB6	1.7e-256	84.35	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Tan0003454 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05750.1	1.3e-168	59.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22690.1	9.4e-106	39.40	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012...	[more]
AT3G22690.2	9.4e-106	39.40	INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro...	[more]
AT3G15930.1	3.3e-103	37.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G37380.1	4.8e-102	38.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 266..291 e-value: 1.4E-4 score: 21.9 coord: 366..391 e-value: 8.7E-4 score: 19.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 191..238 e-value: 5.5E-10 score: 39.3 coord: 159..190 e-value: 2.0E-9 score: 37.5 coord: 293..339 e-value: 8.1E-8 score: 32.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 162..190 e-value: 2.5E-8 score: 31.6 coord: 266..291 e-value: 0.0015 score: 16.6 coord: 367..390 e-value: 0.0013 score: 16.8 coord: 329..356 e-value: 0.001 score: 17.1 coord: 193..226 e-value: 4.1E-9 score: 34.1 coord: 294..327 e-value: 1.5E-6 score: 26.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 11.838262
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 261..291 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 191..225 score: 12.090371
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 160..190 score: 11.23539
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 56..90 score: 9.54735
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 264..484 e-value: 2.0E-44 score: 154.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 125..245 e-value: 8.4E-31 score: 108.7 coord: 48..107 e-value: 1.2E-7 score: 33.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 171..451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR47926:SF65	BNAANNG25350D PROTEIN	coord: 5..512
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 5..512

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003454.1	Tan0003454.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding