Tan0004746.1 (mRNA) Snake gourd v1

Overview


Name	Tan0004746.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	L10-interacting MYB domain-containing protein-like
Location	LG10: 26330542 .. 26331384 (-)
Sequence length	669
RNA-Seq Expression	Tan0004746.1
Synteny	Tan0004746.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAGGATATAACTCTTAGTGATGAAAAAGATAAGCAAACAAAAGCTATTTGGAATGACATTACTCTTAATTCATTCATACAAGTGTGTGTTGTTGAGACCTTGAATGGGAATAAACCTAATTATCATTTTAGTAAGATTGGATGGAGGAATGTGATAAAAAACTTCAATGAGAAGACAGGAAGAAATTATGGATACAGGCAACTTAAGAACAAATGGACATCACTCAAGAAAGATTGGAAAATTTGGGATAAACTGGTTGGAGTTGCAACTGGATTAGGATGAGATCATTTAAGACAAACAATTGATGCAACTAGTGAATGGTGGGATTAGCAAATAAAGGTGAGTATCTTTGAATTTTTTTTTTTAAGAAAATTCAATGCAACTAGTGAATTGTAGAGCCAATAGTGTGATGACGATCGTGTTATTGTTTTATAGGTCGTTCCTGAGGTAGAAAAATATTGTGCAAAAGGGTTGCAAAATGTAGAGCATTTAGGCATTCTTTTCAAGGATGTGGCTGTAAGTGATAAAGTTGAAGGTTTTACTGATGATACAATAGAAGACACAGAAGTCAATGAGAATGAGTTTAACAATGTTGAAAGTGTTGCTAATGATGTTGATGCTAGTGAAACTTATACTCAAGGGAAAGAGAAAAAGAGGAAAAAAATTGGTTCAAGAGTTGGAACTTCTAGGATGTCAGACAAATTAGATCGCCTTTGTGATGTTATTGAATTTATAAGAAGAGATTTGCCAAGATGCAACATTCTTGAAGTAATGGATACTTTAATGAGTTTGCATGGAATTATGGAAGGTGATGAATCGTACATGACTTGTGTCTGA

mRNA sequence

ATGTCGAAGGATATAACTCTTAGTGATGAAAAAGATAAGCAAACAAAAGCTATTTGGAATGACATTACTCTTAATTCATTCATACAAGTGTGTGTTGTTGAGACCTTGAATGGGAATAAACCTAATTATCATTTTAGTAAGATTGGATGGAGGAATGTGATAAAAAACTTCAATGAGAAGACAGGAAGAAATTATGGATACAGGCAACTTAAGAACAAATGGACATCACTCAAGAAAGATTGGAAAATTTGGGATAAACTGGTTGGAGTCGTTCCTGAGGTAGAAAAATATTGTGCAAAAGGGTTGCAAAATGTAGAGCATTTAGGCATTCTTTTCAAGGATGTGGCTGTAAGTGATAAAGTTGAAGGTTTTACTGATGATACAATAGAAGACACAGAAGTCAATGAGAATGAGTTTAACAATGTTGAAAGTGTTGCTAATGATGTTGATGCTAGTGAAACTTATACTCAAGGGAAAGAGAAAAAGAGGAAAAAAATTGGTTCAAGAGTTGGAACTTCTAGGATGTCAGACAAATTAGATCGCCTTTGTGATGTTATTGAATTTATAAGAAGAGATTTGCCAAGATGCAACATTCTTGAAGTAATGGATACTTTAATGAGTTTGCATGGAATTATGGAAGGTGATGAATCGTACATGACTTGTGTCTGA

Coding sequence (CDS)

ATGTCGAAGGATATAACTCTTAGTGATGAAAAAGATAAGCAAACAAAAGCTATTTGGAATGACATTACTCTTAATTCATTCATACAAGTGTGTGTTGTTGAGACCTTGAATGGGAATAAACCTAATTATCATTTTAGTAAGATTGGATGGAGGAATGTGATAAAAAACTTCAATGAGAAGACAGGAAGAAATTATGGATACAGGCAACTTAAGAACAAATGGACATCACTCAAGAAAGATTGGAAAATTTGGGATAAACTGGTTGGAGTCGTTCCTGAGGTAGAAAAATATTGTGCAAAAGGGTTGCAAAATGTAGAGCATTTAGGCATTCTTTTCAAGGATGTGGCTGTAAGTGATAAAGTTGAAGGTTTTACTGATGATACAATAGAAGACACAGAAGTCAATGAGAATGAGTTTAACAATGTTGAAAGTGTTGCTAATGATGTTGATGCTAGTGAAACTTATACTCAAGGGAAAGAGAAAAAGAGGAAAAAAATTGGTTCAAGAGTTGGAACTTCTAGGATGTCAGACAAATTAGATCGCCTTTGTGATGTTATTGAATTTATAAGAAGAGATTTGCCAAGATGCAACATTCTTGAAGTAATGGATACTTTAATGAGTTTGCATGGAATTATGGAAGGTGATGAATCGTACATGACTTGTGTCTGA

Protein sequence

MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEKTGRNYGYRQLKNKWTSLKKDWKIWDKLVGVVPEVEKYCAKGLQNVEHLGILFKDVAVSDKVEGFTDDTIEDTEVNENEFNNVESVANDVDASETYTQGKEKKRKKIGSRVGTSRMSDKLDRLCDVIEFIRRDLPRCNILEVMDTLMSLHGIMEGDESYMTCV

Homology

[Close]

BLAST of Tan0004746.1 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.1e-15
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 16 KAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEKTGRNYGYRQLKNKWT 75
          KA+W       F+ +CV +T+ GNKP  HFSK GWRN++ +F E+TG  Y   QLKN W 
Sbjct: 4  KAVWEPEYHRVFVDLCVEQTMLGNKPGTHFSKEGWRNILISFQEQTGAMYDRMQLKNHWD 63

Query: 76 SLKKDWKIWDKLV 89
          ++ + WKIW +LV
Sbjct: 64 TMSRQWKIWRRLV 76

[Close]

BLAST of Tan0004746.1 vs. NCBI nr
Match: XP_022159819.1 (L10-interacting MYB domain-containing protein-like [Momordica charantia] >XP_022159820.1 L10-interacting MYB domain-containing protein-like [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 2.7e-72
Identity = 151/264 (57.20%), Postives = 180/264 (68.18%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MS+ I  SDE+++Q KAIW+D+TL+SFI VCV ETLNGN+P  HFSKIGWRNV+KNF EK
Sbjct: 1   MSRSIATSDERERQIKAIWDDVTLDSFIHVCVGETLNGNRPRGHFSKIGWRNVVKNFXEK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLVG--------------------------VVPEV 120
           TGRNYGY+QLKNKWT+LKKDW++W+ LVG                          V+PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKKDWQVWNDLVGTEKGLEWDPLRQTIEATTQWWDNKLKVLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV------------------SDKVEGFTDDTIEDTEVNE 180
            K+ A+GLQNVE L ILFKDVAV                  SDKVE + DDT+ DT    
Sbjct: 121 AKFRARGLQNVELLNILFKDVAVDGGAWAPTPSQVVLLDATSDKVEDYNDDTMGDTNNEN 180

Query: 181 NEFNNVESVANDVDASET-YTQGKEKKRKKIGSRVGTSRMSDKLDRLCDVIEFIRRDLPR 220
            EFNNVES  N+V+ S T YTQG EKKRKK+ S+VG+S++ D LDRLCD IE+ RRDLP 
Sbjct: 181 EEFNNVESNTNEVNTSGTYYTQGSEKKRKKVDSKVGSSKLFDALDRLCDAIEYRRRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. NCBI nr
Match: XP_008436966.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo] >KAA0055085.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 2.0e-67
Identity = 143/264 (54.17%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MSK +  SDEK++QTKAIW+D+T++SFI VCV ETLNG++P  +F+K GWRNV+KNF EK
Sbjct: 1   MSKSLATSDEKERQTKAIWDDVTVDSFINVCVTETLNGHRPRGYFTKTGWRNVVKNFYEK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLV--------------------------GVVPEV 120
           TGRNYGY+QLKNKWT+LK+DW++W+ L+                           V+PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKRDWQVWNDLIRNEKEIGWDPLRQTIDATSQWWDHKLKVLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV-----------------SDKVE-GFTDDTIEDTEVNE 180
            K+ AKGLQNVE L ILFK VA+                 SD+VE  + DDTI DT+ NE
Sbjct: 121 AKFRAKGLQNVELLNILFKGVAINGGAWAPTPSQVVLRKESDEVEKDYNDDTIGDTKFNE 180

Query: 181 NEFNNVESVANDVDASETYTQGKEKKRKKIGSRVGT-SRMSDKLDRLCDVIEFIRRDLPR 220
           NEFNNVES  N+V+ S TYTQ  EK+RK++ S+VG+ SR+ D LDRL D IE+ +RDLP 
Sbjct: 181 NEFNNVESNTNEVNTSATYTQESEKRRKRVDSKVGSPSRLFDALDRLSDAIEYRKRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. NCBI nr
Match: XP_022969742.1 (L10-interacting MYB domain-containing protein-like [Cucurbita maxima] >XP_022969743.1 L10-interacting MYB domain-containing protein-like [Cucurbita maxima])

HSP 1 Score: 263.1 bits (671), Expect = 2.2e-66
Identity = 136/260 (52.31%), Postives = 181/260 (69.62%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MSK +  SDE+++QTKAIW+D+T++SFI VC+ ETLNGN+ + HF+KIGWRNV+KNFN K
Sbjct: 1   MSKSLAASDEEERQTKAIWDDVTVDSFINVCITETLNGNRTHGHFTKIGWRNVVKNFNAK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLVG--------------------------VVPEV 120
           TGRNYGY+QLKNKWT+LK+DW++W+ L+G                          ++PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKRDWQVWNDLIGTDKQLGWDTQRQTIDATSQWWDDKLKILPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAVSD------------KVEGFTDDTIEDTEVNENEFNNV 180
            K+ A+GLQNVE L ILF+DVA  +              +  +DDTI DT++NENEFNN+
Sbjct: 121 TKFRAQGLQNVELLNILFEDVAAGNGGAWVPTPTRVVLRKSSSDDTIGDTKLNENEFNNI 180

Query: 181 ESVANDVDASETYTQGKEKKRKKI-GSRVG--TSRMSDKLDRLCDVIEFIRRDLPRCNIL 220
           ES  N+V+ S TY+QG EK+RKK+  S+VG  +SR+ + L+ LCD IE+ RRDLP C+ L
Sbjct: 181 ESNTNEVNTSATYSQGSEKRRKKVEDSKVGLSSSRLFEALEHLCDAIEYRRRDLPGCSTL 240

[Close]

BLAST of Tan0004746.1 vs. NCBI nr
Match: XP_004143736.1 (L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740845.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >KGN50325.1 hypothetical protein Csa_000493 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-66
Identity = 143/264 (54.17%), Postives = 184/264 (69.70%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MSK  T SDEK++QTKAIW+D+T++SFI VCV ETLNG++P  +F+KIGWRNV+KNF EK
Sbjct: 1   MSK--TTSDEKERQTKAIWDDVTVDSFINVCVTETLNGHRPRGYFTKIGWRNVVKNFYEK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLVG--------------------------VVPEV 120
           TGRNYGY+QLKNKWT+LK+DW++W+ L+G                          V+PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKRDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKVLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV-----------------SDKV-EGFTDDTIEDTEVNE 180
            K+ AKGLQ++E L ILFK VA+                 SD+V E + +DTI DT+ NE
Sbjct: 121 AKFRAKGLQSLELLNILFKGVAINGGAWAPNPSQVVLRKESDEVEEDYNEDTIGDTKFNE 180

Query: 181 NEFNNVESVANDVDASETYTQGKEKKRKKIGSRVGT-SRMSDKLDRLCDVIEFIRRDLPR 220
           NEFNNVES  N+V+ S T+TQ  EK+RK++ S+VG+ SR+ D LDRL DVIE+ +RDLP 
Sbjct: 181 NEFNNVESNTNEVNTSATHTQESEKRRKRVDSKVGSPSRLFDALDRLSDVIEYRKRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. NCBI nr
Match: XP_038874429.1 (L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874430.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874431.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874432.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida])

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-66
Identity = 140/264 (53.03%), Postives = 177/264 (67.05%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MS+ +  SDEK++QTKA+W+D+T++SFI VCV ETLNG++P  +F+KIGWRNV+KNF E+
Sbjct: 1   MSRSLATSDEKERQTKAVWDDVTVDSFINVCVTETLNGHRPRGYFTKIGWRNVVKNFYER 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLVG--------------------------VVPEV 120
           TGRNYGY+QLKNKWT+LKKDW++W+ L+G                           +PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKKDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKDLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV------------------SDKVEGFTDDTIEDTEVNE 180
            K+ AKGLQNVE L ILFKDVAV                  SD +E + DDT  DT    
Sbjct: 121 AKFRAKGLQNVELLNILFKDVAVSGGAWAPTPSQVVLRKATSDGIEDYNDDTTGDT---- 180

Query: 181 NEFNNVESVANDVDASETYTQGKEKKRKKIGSRVGT-SRMSDKLDRLCDVIEFIRRDLPR 220
            +FNNVES  N+V+ S TYTQG EK+RKK+ S+VG+  R+   LDRLCDVIE+ RRDLP 
Sbjct: 181 -KFNNVESNTNEVNTSATYTQGSEKRRKKVDSKVGSPCRLFGALDRLCDVIEYRRRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. ExPASy TrEMBL
Match: A0A6J1DZU8 (L10-interacting MYB domain-containing protein-like OS=Momordica charantia OX=3673 GN=LOC111026126 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.3e-72
Identity = 151/264 (57.20%), Postives = 180/264 (68.18%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MS+ I  SDE+++Q KAIW+D+TL+SFI VCV ETLNGN+P  HFSKIGWRNV+KNF EK
Sbjct: 1   MSRSIATSDERERQIKAIWDDVTLDSFIHVCVGETLNGNRPRGHFSKIGWRNVVKNFXEK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLVG--------------------------VVPEV 120
           TGRNYGY+QLKNKWT+LKKDW++W+ LVG                          V+PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKKDWQVWNDLVGTEKGLEWDPLRQTIEATTQWWDNKLKVLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV------------------SDKVEGFTDDTIEDTEVNE 180
            K+ A+GLQNVE L ILFKDVAV                  SDKVE + DDT+ DT    
Sbjct: 121 AKFRARGLQNVELLNILFKDVAVDGGAWAPTPSQVVLLDATSDKVEDYNDDTMGDTNNEN 180

Query: 181 NEFNNVESVANDVDASET-YTQGKEKKRKKIGSRVGTSRMSDKLDRLCDVIEFIRRDLPR 220
            EFNNVES  N+V+ S T YTQG EKKRKK+ S+VG+S++ D LDRLCD IE+ RRDLP 
Sbjct: 181 EEFNNVESNTNEVNTSGTYYTQGSEKKRKKVDSKVGSSKLFDALDRLCDAIEYRRRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. ExPASy TrEMBL
Match: A0A5A7UN70 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00110 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 9.7e-68
Identity = 143/264 (54.17%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MSK +  SDEK++QTKAIW+D+T++SFI VCV ETLNG++P  +F+K GWRNV+KNF EK
Sbjct: 1   MSKSLATSDEKERQTKAIWDDVTVDSFINVCVTETLNGHRPRGYFTKTGWRNVVKNFYEK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLV--------------------------GVVPEV 120
           TGRNYGY+QLKNKWT+LK+DW++W+ L+                           V+PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKRDWQVWNDLIRNEKEIGWDPLRQTIDATSQWWDHKLKVLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV-----------------SDKVE-GFTDDTIEDTEVNE 180
            K+ AKGLQNVE L ILFK VA+                 SD+VE  + DDTI DT+ NE
Sbjct: 121 AKFRAKGLQNVELLNILFKGVAINGGAWAPTPSQVVLRKESDEVEKDYNDDTIGDTKFNE 180

Query: 181 NEFNNVESVANDVDASETYTQGKEKKRKKIGSRVGT-SRMSDKLDRLCDVIEFIRRDLPR 220
           NEFNNVES  N+V+ S TYTQ  EK+RK++ S+VG+ SR+ D LDRL D IE+ +RDLP 
Sbjct: 181 NEFNNVESNTNEVNTSATYTQESEKRRKRVDSKVGSPSRLFDALDRLSDAIEYRKRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. ExPASy TrEMBL
Match: A0A1S3AT15 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103482538 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 9.7e-68
Identity = 143/264 (54.17%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MSK +  SDEK++QTKAIW+D+T++SFI VCV ETLNG++P  +F+K GWRNV+KNF EK
Sbjct: 1   MSKSLATSDEKERQTKAIWDDVTVDSFINVCVTETLNGHRPRGYFTKTGWRNVVKNFYEK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLV--------------------------GVVPEV 120
           TGRNYGY+QLKNKWT+LK+DW++W+ L+                           V+PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKRDWQVWNDLIRNEKEIGWDPLRQTIDATSQWWDHKLKVLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV-----------------SDKVE-GFTDDTIEDTEVNE 180
            K+ AKGLQNVE L ILFK VA+                 SD+VE  + DDTI DT+ NE
Sbjct: 121 AKFRAKGLQNVELLNILFKGVAINGGAWAPTPSQVVLRKESDEVEKDYNDDTIGDTKFNE 180

Query: 181 NEFNNVESVANDVDASETYTQGKEKKRKKIGSRVGT-SRMSDKLDRLCDVIEFIRRDLPR 220
           NEFNNVES  N+V+ S TYTQ  EK+RK++ S+VG+ SR+ D LDRL D IE+ +RDLP 
Sbjct: 181 NEFNNVESNTNEVNTSATYTQESEKRRKRVDSKVGSPSRLFDALDRLSDAIEYRKRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. ExPASy TrEMBL
Match: A0A6J1HX63 (L10-interacting MYB domain-containing protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468847 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.1e-66
Identity = 136/260 (52.31%), Postives = 181/260 (69.62%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MSK +  SDE+++QTKAIW+D+T++SFI VC+ ETLNGN+ + HF+KIGWRNV+KNFN K
Sbjct: 1   MSKSLAASDEEERQTKAIWDDVTVDSFINVCITETLNGNRTHGHFTKIGWRNVVKNFNAK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLVG--------------------------VVPEV 120
           TGRNYGY+QLKNKWT+LK+DW++W+ L+G                          ++PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKRDWQVWNDLIGTDKQLGWDTQRQTIDATSQWWDDKLKILPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAVSD------------KVEGFTDDTIEDTEVNENEFNNV 180
            K+ A+GLQNVE L ILF+DVA  +              +  +DDTI DT++NENEFNN+
Sbjct: 121 TKFRAQGLQNVELLNILFEDVAAGNGGAWVPTPTRVVLRKSSSDDTIGDTKLNENEFNNI 180

Query: 181 ESVANDVDASETYTQGKEKKRKKI-GSRVG--TSRMSDKLDRLCDVIEFIRRDLPRCNIL 220
           ES  N+V+ S TY+QG EK+RKK+  S+VG  +SR+ + L+ LCD IE+ RRDLP C+ L
Sbjct: 181 ESNTNEVNTSATYSQGSEKRRKKVEDSKVGLSSSRLFEALEHLCDAIEYRRRDLPGCSTL 240

[Close]

BLAST of Tan0004746.1 vs. ExPASy TrEMBL
Match: A0A0A0KKV6 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167170 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.4e-66
Identity = 143/264 (54.17%), Postives = 184/264 (69.70%), Query Frame = 0


Query: 1   MSKDITLSDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEK 60
           MSK  T SDEK++QTKAIW+D+T++SFI VCV ETLNG++P  +F+KIGWRNV+KNF EK
Sbjct: 1   MSK--TTSDEKERQTKAIWDDVTVDSFINVCVTETLNGHRPRGYFTKIGWRNVVKNFYEK 60

Query: 61  TGRNYGYRQLKNKWTSLKKDWKIWDKLVG--------------------------VVPEV 120
           TGRNYGY+QLKNKWT+LK+DW++W+ L+G                          V+PE 
Sbjct: 61  TGRNYGYKQLKNKWTTLKRDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKVLPEA 120

Query: 121 EKYCAKGLQNVEHLGILFKDVAV-----------------SDKV-EGFTDDTIEDTEVNE 180
            K+ AKGLQ++E L ILFK VA+                 SD+V E + +DTI DT+ NE
Sbjct: 121 AKFRAKGLQSLELLNILFKGVAINGGAWAPNPSQVVLRKESDEVEEDYNEDTIGDTKFNE 180

Query: 181 NEFNNVESVANDVDASETYTQGKEKKRKKIGSRVGT-SRMSDKLDRLCDVIEFIRRDLPR 220
           NEFNNVES  N+V+ S T+TQ  EK+RK++ S+VG+ SR+ D LDRL DVIE+ +RDLP 
Sbjct: 181 NEFNNVESNTNEVNTSATHTQESEKRRKRVDSKVGSPSRLFDALDRLSDVIEYRKRDLPG 240

[Close]

BLAST of Tan0004746.1 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 16 KAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEKTGRNYGYRQLKNKWT 75
          KA+W       F+ +CV +T+ GNKP  HFSK GWRN++ +F E+TG  Y   QLKN W 
Sbjct: 4  KAVWEPEYHRVFVDLCVEQTMLGNKPGTHFSKEGWRNILISFQEQTGAMYDRMQLKNHWD 63

Query: 76 SLKKDWKIWDKLV 89
          ++ + WKIW +LV
Sbjct: 64 TMSRQWKIWRRLV 76

[Close]

BLAST of Tan0004746.1 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 16 KAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEKTGRNYGYRQLKNKWT 75
          KA+W       F+ +CV +T+ GNKP  HFSK GWRN++ +F E+TG  Y   QLKN W 
Sbjct: 4  KAVWEPEYHRVFVDLCVEQTMLGNKPGTHFSKEGWRNILISFQEQTGAMYDRMQLKNHWD 63

Query: 76 SLKKDWKIWDKLV 89
          ++ + WKIW +LV
Sbjct: 64 TMSRQWKIWRRLV 76

[Close]

BLAST of Tan0004746.1 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-12
Identity = 27/82 (32.93%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 8   SDEKDKQTKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEKTGRNYGY 67
           S+    Q+K  W+  +   F+ +   E L GN+P+ H+ K  W+ +++  N+ TG+++  
Sbjct: 157 SNFSSPQSKGYWSPSSHELFVDLLFQEALKGNRPDSHYPKETWKMILETINQNTGKSFTR 216

Query: 68  RQLKNKWTSLKKDWKIWDKLVG 90
            QLKN W   +K WKIW +++G
Sbjct: 217 PQLKNHWDCTRKSWKIWCQVIG 238

[Close]

BLAST of Tan0004746.1 vs. TAIR 10
Match: AT3G11310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 26/79 (32.91%), Postives = 44/79 (55.70%), Query Frame = 0


Query: 16  KAIWNDITLNSFIQVCVVETLNGNKP-----NYHFSKIGWRNVIKNFNEKTGRNYGYRQL 75
           KA W+  +   F+ +   E+L  N+P     N +++K  W  ++++FN+KTG  Y  +QL
Sbjct: 173 KAYWSSSSHEIFVDLLFTESLKENRPKPARRNGYYAKETWNMMVESFNQKTGLRYTRKQL 232

Query: 76  KNKWTSLKKDWKIWDKLVG 90
           KN W   +  W+ W + VG
Sbjct: 233 KNHWNITRDAWRRWCQAVG 251

[Close]

BLAST of Tan0004746.1 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 9.7e-04
Identity = 23/74 (31.08%), Postives = 38/74 (51.35%), Query Frame = 0


Query: 15 TKAIWNDITLNSFIQVCVVETLNGNKPNYHFSKIGWRNVIKNFNEKTGRNYGYRQLKNKW 74
          +KA W       F+ +CV + + GN+P         +++++ F E  G  +   QL N W
Sbjct: 3  SKAAWEPEHDEVFVDLCVEQKMLGNQPE-------MQHILEAFQE-MGVRFTIDQLINHW 62

Query: 75 TSLKKDWKIWDKLV 89
           ++ K WKIW +LV
Sbjct: 63 DTMIKQWKIWCRLV 68

The following BLAST results are available for this feature:

BLAST of Tan0004746.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFJ8	3.1e-15	47.95	L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Tan0004746.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159819.1	2.7e-72	57.20	L10-interacting MYB domain-containing protein-like [Momordica charantia] >XP_022...	[more]
XP_008436966.1	2.0e-67	54.17	PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo] >KA...	[more]
XP_022969742.1	2.2e-66	52.31	L10-interacting MYB domain-containing protein-like [Cucurbita maxima] >XP_022969...	[more]
XP_004143736.1	2.9e-66	54.17	L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 ...	[more]
XP_038874429.1	2.9e-66	53.03	L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_03887...	[more]

BLAST of Tan0004746.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZU8	1.3e-72	57.20	L10-interacting MYB domain-containing protein-like OS=Momordica charantia OX=367...	[more]
A0A5A7UN70	9.7e-68	54.17	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3AT15	9.7e-68	54.17	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1HX63	1.1e-66	52.31	L10-interacting MYB domain-containing protein-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0KKV6	1.4e-66	54.17	Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167...	[more]

BLAST of Tan0004746.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05800.1	2.2e-16	47.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G05800.2	2.2e-16	47.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11290.1	7.4e-12	32.93	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11310.1	1.7e-08	32.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G19220.1	9.7e-04	31.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 19..88 e-value: 4.4E-16 score: 59.6
None	No IPR available	PANTHER	PTHR31704:SF37	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 8..220
IPR045026	L10-interacting MYB domain-containing protein	PANTHER	PTHR31704	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 8..220

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0004746	Tan0004746	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0004746.1-cds	Tan0004746.1-cds-LG10:26330542..26330943	CDS
Tan0004746.1-cds	Tan0004746.1-cds-LG10:26331118..26331384	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0004746.1-exon	Tan0004746.1-exon-LG10:26330542..26330943	exon
Tan0004746.1-exon	Tan0004746.1-exon-LG10:26331118..26331384	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0004746.1	Tan0004746.1-protein	polypeptide