Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGACTGCCGCCAGTTGTGCAGCTTCGAGATATAAAGAAATTTCAAGCGAGCGCATCAGCGATCCCAACTTTTCAAAAGAAATGGAAATCCACTGCAGCGGATTGAGAATGATGAAGGAAAAATTCCCGAGACGCCAAAGCTTTGCTTGGACAAAGCATTGGACATATTCTTCATATATCACCATCAAGACATTCCATTCCCATCAAAACAGAATGAATTTTGTTCTAAAGATTGTGACGCCATCTCAAGAACCAGGATAA mRNA sequence ATGACTGCCGCCAGTTGTGCAGCTTCGAGATATAAAGAAATTTCAAGCGAGCGCATCAGCGATCCCAACTTTTCAAAAGAAATGGAAATCCACTGCAGCGGATTGAGAATGATGAAGGAAAAATTCCCGAGACGCCAAAGCTTTGCTTGGACAAAGCATTGGACATATTCTTCATATATCACCATCAAGACATTCCATTCCCATCAAAACAGAATGAATTTTGTTCTAAAGATTGTGACGCCATCTCAAGAACCAGGATAA Coding sequence (CDS) ATGACTGCCGCCAGTTGTGCAGCTTCGAGATATAAAGAAATTTCAAGCGAGCGCATCAGCGATCCCAACTTTTCAAAAGAAATGGAAATCCACTGCAGCGGATTGAGAATGATGAAGGAAAAATTCCCGAGACGCCAAAGCTTTGCTTGGACAAAGCATTGGACATATTCTTCATATATCACCATCAAGACATTCCATTCCCATCAAAACAGAATGAATTTTGTTCTAAAGATTGTGACGCCATCTCAAGAACCAGGATAA Protein sequence MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYITIKTFHSHQNRMNFVLKIVTPSQEPG
Homology
BLAST of Csor.00g243160.m01 vs. NCBI nr
Match: KAG6577063.1 (hypothetical protein SDJN03_24637, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 178 bits (452), Expect = 1.82e-56 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYI 60
MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYI
Sbjct: 1 MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYI 60
Query: 61 TIKTFHSHQNRMNFVLKIVTPSQEPG 86
TIKTFHSHQNRMNFVLKIVTPSQEPG
Sbjct: 61 TIKTFHSHQNRMNFVLKIVTPSQEPG 86
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6577063.1 | 1.82e-56 | 100.00 | hypothetical protein SDJN03_24637, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g243160.m01.CDS01 | Csor.00g243160.m01.CDS01 | CDS |
The following single feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g243160.m01.single01 | Csor.00g243160.m01.single01 | single |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g243160.m01.stop_codon01 | Csor.00g243160.m01.stop_codon01 | stop_codon |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g243160.m01.start_codon01 | Csor.00g243160.m01.start_codon01 | start_codon |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g243160.m01 | Csor.00g243160.m01-protein | polypeptide |
|
