Csor.00g216600 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g216600
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr10: 2431652 .. 2431945 (+)
RNA-Seq Expression	Csor.00g216600
Synteny	Csor.00g216600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTAGCAGCTGCATGCCTTGTTTGCATAGCCATTTTGGCATCACCCGCGATGGCGCCTGATCCCTTCGCAGCGGAAGGGTTCTCGTTGTTTGGTTGCACGTCGGCTGTTTCGGAGATGACCAAGTGTGTGGTAGATGTGATGAAGCAAGCGGTGGCTCCTCATCCGTCTTGTTGCAGAGCCATTTCTAAGCTTAATCGGTGTTCTTCTGTGTTTCTTAAAGATGTTCCTTCTGCTGATATGTTTTTGATTAAGACTGTTTGTGCTTTGTGGGGTGTTCCTGTTTCTTAA

mRNA sequence

ATGAAGCTAGCAGCTGCATGCCTTGTTTGCATAGCCATTTTGGCATCACCCGCGATGGCGCCTGATCCCTTCGCAGCGGAAGGGTTCTCGTTGTTTGGTTGCACGTCGGCTGTTTCGGAGATGACCAAGTGTGTGGTAGATGTGATGAAGCAAGCGGTGGCTCCTCATCCGTCTTGTTGCAGAGCCATTTCTAAGCTTAATCGGTGTTCTTCTGTGTTTCTTAAAGATGTTCCTTCTGCTGATATGTTTTTGATTAAGACTGTTTGTGCTTTGTGGGGTGTTCCTGTTTCTTAA

Coding sequence (CDS)

ATGAAGCTAGCAGCTGCATGCCTTGTTTGCATAGCCATTTTGGCATCACCCGCGATGGCGCCTGATCCCTTCGCAGCGGAAGGGTTCTCGTTGTTTGGTTGCACGTCGGCTGTTTCGGAGATGACCAAGTGTGTGGTAGATGTGATGAAGCAAGCGGTGGCTCCTCATCCGTCTTGTTGCAGAGCCATTTCTAAGCTTAATCGGTGTTCTTCTGTGTTTCTTAAAGATGTTCCTTCTGCTGATATGTTTTTGATTAAGACTGTTTGTGCTTTGTGGGGTGTTCCTGTTTCTTAA

Protein sequence

MKLAAACLVCIAILASPAMAPDPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVAPHPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS

Homology

[Close]

BLAST of Csor.00g216600 vs. NCBI nr
Match: KAG6589812.1 (hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194 bits (493), Expect = 2.24e-62
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MKLAAACLVCIAILASPAMAPDPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVAPHPSCC 60
          MKLAAACLVCIAILASPAMAPDPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVAPHPSCC
Sbjct: 1  MKLAAACLVCIAILASPAMAPDPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVAPHPSCC 60

Query: 61 RAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS 97
          RAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS
Sbjct: 61 RAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS 97

[Close]

BLAST of Csor.00g216600 vs. NCBI nr
Match: KAE8653021.1 (hypothetical protein Csa_004567 [Cucumis sativus])

HSP 1 Score: 129 bits (323), Expect = 2.33e-36
Identity = 69/101 (68.32%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MKLAAACLVCIAILA------SPAMAP-DPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAV 60
           MKL    LVCIAILA      + A+AP DPF AE FSL GCTS +SE T C+VDVMK AV
Sbjct: 4   MKLPLVFLVCIAILAVSGMAHTGALAPADPFTAEEFSLLGCTSFISEATNCMVDVMKNAV 63

Query: 61  APHPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGV 94
           APHPSCC+A SKLN CSS FLK +PSADM LIK +CALWGV
Sbjct: 64  APHPSCCKAFSKLNDCSSEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of Csor.00g216600 vs. NCBI nr
Match: TYK10330.1 (hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (305), Expect = 1.29e-33
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 2   KLAAACLVCIAILA------SPAMAP-DPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVA 61
           KL     VC+AILA      + A AP DPF AE  SL GCTS +SE TKCV+DVMK AVA
Sbjct: 5   KLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNAVA 64

Query: 62  PHPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGV 94
           PHPSCC+A SKLN CS  FLK +PSADM LIK +CALWGV
Sbjct: 65  PHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of Csor.00g216600 vs. NCBI nr
Match: KAA0050078.1 (hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (305), Expect = 1.29e-33
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 2   KLAAACLVCIAILA------SPAMAP-DPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVA 61
           KL     VC+AILA      + A AP DPF AE  SL GCTS +SE TKCV+DVMK AVA
Sbjct: 5   KLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEKLSLLGCTSFISEATKCVIDVMKNAVA 64

Query: 62  PHPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGV 94
           PHPSCC+A SKLN CS  FLK +PSADM LIK +CALWGV
Sbjct: 65  PHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of Csor.00g216600 vs. NCBI nr
Match: TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (287), Expect = 8.19e-31
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 2   KLAAACLVCIAILASPAMAPDPFAA------EGFSLFGCTSAVSEMTKCVVDVMKQAVAP 61
           KL    LVCIAILAS   A     A      E FSLF C S V + TKCV+DV+K AVAP
Sbjct: 8   KLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNAVAP 67

Query: 62  HPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS 97
           HPSCC AIS+L+ CSS FLKD+PS+DM L+K++CA WGV +S
Sbjct: 68  HPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

[Close]

BLAST of Csor.00g216600 vs. ExPASy TrEMBL
Match: A0A5A7U483 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00620 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 6.23e-34
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 2   KLAAACLVCIAILA------SPAMAP-DPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVA 61
           KL     VC+AILA      + A AP DPF AE  SL GCTS +SE TKCV+DVMK AVA
Sbjct: 5   KLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEKLSLLGCTSFISEATKCVIDVMKNAVA 64

Query: 62  PHPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGV 94
           PHPSCC+A SKLN CS  FLK +PSADM LIK +CALWGV
Sbjct: 65  PHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of Csor.00g216600 vs. ExPASy TrEMBL
Match: A0A5D3CG41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00010 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 6.23e-34
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 2   KLAAACLVCIAILA------SPAMAP-DPFAAEGFSLFGCTSAVSEMTKCVVDVMKQAVA 61
           KL     VC+AILA      + A AP DPF AE  SL GCTS +SE TKCV+DVMK AVA
Sbjct: 5   KLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNAVA 64

Query: 62  PHPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGV 94
           PHPSCC+A SKLN CS  FLK +PSADM LIK +CALWGV
Sbjct: 65  PHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of Csor.00g216600 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 3.97e-31
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 2   KLAAACLVCIAILASPAMAPDPFAA------EGFSLFGCTSAVSEMTKCVVDVMKQAVAP 61
           KL    LVCIAILAS   A     A      E FSLF C S V + TKCV+DV+K AVAP
Sbjct: 8   KLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNAVAP 67

Query: 62  HPSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS 97
           HPSCC AIS+L+ CSS FLKD+PS+DM L+K++CA WGV +S
Sbjct: 68  HPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

[Close]

BLAST of Csor.00g216600 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 8.76e-30
Identity = 62/101 (61.39%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 2   KLAAACLVCIAILASPAMA-PDPFAA---EG-FSLFGCTSAVSEMTKCVVDVMKQAVAPH 61
           KL  A L CI ILAS  MA P   AA   EG  SLF C S V + T+CV+DV+K AVAPH
Sbjct: 7   KLPLALLFCIFILASSVMARPVTVAAAAPEGDISLFPCKSFVPKATECVIDVLKNAVAPH 66

Query: 62  PSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS 97
           PSCC+AIS+L+ CSS FLKD+PS DM L+K++CALWGV +S
Sbjct: 67  PSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

[Close]

BLAST of Csor.00g216600 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 1.24e-29
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 2   KLAAACLVCIAILASPAMA-PDPFAAEG----FSLFGCTSAVSEMTKCVVDVMKQAVAPH 61
           KL  A L CI ILAS  MA P   AA       SLF C S V + T+CV+DV+K AVAPH
Sbjct: 7   KLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLKNAVAPH 66

Query: 62  PSCCRAISKLNRCSSVFLKDVPSADMFLIKTVCALWGVPVS 97
           PSCC+AIS+L+ CSS FLKD+PS DM L+K++CALWGV +S
Sbjct: 67  PSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

The following BLAST results are available for this feature:

BLAST of Csor.00g216600 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g216600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589812.1	2.24e-62	100.00	hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8653021.1	2.33e-36	68.32	hypothetical protein Csa_004567 [Cucumis sativus]	[more]
TYK10330.1	1.29e-33	65.00	hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]	[more]
KAA0050078.1	1.29e-33	65.00	hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]	[more]
TYK10345.1	8.19e-31	58.82	hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]	[more]

BLAST of Csor.00g216600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U483	6.23e-34	65.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CG41	6.23e-34	65.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CFS6	3.97e-31	58.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U8Y3	8.76e-30	61.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CEQ4	1.24e-29	59.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Csor.00g216600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g216600.m01	Csor.00g216600.m01	mRNA