Carg05660 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05660
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L8
Location	Carg_Chr16: 3622390 .. 3624438 (-)
RNA-Seq Expression	Carg05660
Synteny	Carg05660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAAGCTACACCTGTTCCCAAACACCCGTCTAGGGCAACCCTCAATCGGTCTCTAAAAACCCTAATCCCCATCTTTTCTCAGTTCTCAATTACAGCGCCACTTCCTCCCCTTCCCCCAAATCACCCAATCCCTAATTCAGATCCTCCAATGGGTCGTGTCATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCTCACACCCACCACCGCAAGGGTCCTGCCCGTTTCCGCTCTCTTGATTTCGGGGAGCGAAATGGTTACCTGAAAGGTGTGGTCAGTGAGATCATCCACGATCCCGGTAGGGGTGCGCCGTTGGCCCGCGTCACCTTCCGCCACCCTTTCCGCTACAAGCACCAGAAGGAGCTCTTTGTCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGAAAGAAGGCTAACCTCGTCGTCGGTAATGTGCTTCCCATCAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACAGAGGTGTGTTCGCTAGATGCTCTGGTGATTATGCCATTGTTATCAGTCACAACCCAGATAATGATACCAGCAGGTAAATTTTGATTTCTGCACTTTCTCCTTGTTATTTTCTGAAACAGAATCGAATCATGTTTGAATAAGAACTATGGGTTTTTCTTTGATTGTTTTATGTGGTTGTATACTTTTCAGGACTCGTTCTTTCTTGCTAATTGTTCTAGGGATGTTTGTGCTATAATTCGTTTAATGAAGTTTGAACTGAATCGAACAAATGGGTTTGACTTGAATTTGCCTTTTGCGGTCAGAGATTACAGATTTAAGATCTCTGTTTTGGGTTACAGATTCCCTTTCTCATATATTCTCTGAAATTAGTTTATTGTTTTACTAAGAGTTCTAGTTGTGCTCTGATTAACAAACAGTAATTCAATTGATATATGTGGATAATCTTATTGACATCTTTGAACAATTTGTATGGGAAGGATTGTCAGGAAACAAGAGGATAATTTTGGAAGGAGTGGGAGAAGATAATTTATGACATCTGATTGTAATGGGTTTAGCTTCCATACGGATTAATTCTTATTGTCAATCATTCTTATTTTCTTTCATTTTTATAGTTTCACTTGATTGTTGATATAATGTTGTGCTTTGGTTCATAGATATTGTTCATCTGTAAAATAAGTTTTATTTGTGTTCTGTTCTTGGAGTGATGCCTAAAGTTAGTAGTCTTACAGCACGGAGTTTCTCTGTTATCGATGAACATGAATATCGATATGCTATTGAACTTTTATCACAGGAAAACTTGTACTCCTTTAGAATATAAACTCTCCTTGTTTATGTTTACTTGCTGCGTGATTTGCAAGCGTTTGCCATTGTGTCTTCATTTCTCTGAAGAAGGCACATGTAGAGTACCCTCTTTGATTCCTAGCCTGCCTTCATCTCGAAAAGTCTGTGTTTTGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTCCCAAGTGGGTGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTGAAGGCAGGTAATGCTTACCACAAGTTCCGTGTGAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCATGCCAGTACCGTCCGCCGTGATGCCCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGTGGACAGGCTGCCGCCACTGCTTCCAAGGCTGATAAAGCTTAGAGCAATAGTTTCATGTGTTGGACGCTTATTTTGCCTAATCCTTAGCCTTTTTTCATTATGTTTGATTGGATTTGCATTGTGTTGAAGAAGACCATATTTAGAAGTTTTTGTCCCAAGTTTTGTTACAACATAGATCCTTTTTTAACATCATCCTCTCTCCTATTTTTGGTTGCTACAATGAACTTGAGAACTTCGATCAACTTAAACAGGCTTTTTAAATGTGATACAATTAC

mRNA sequence

GATAAAGCTACACCTGTTCCCAAACACCCGTCTAGGGCAACCCTCAATCGGTCTCTAAAAACCCTAATCCCCATCTTTTCTCAGTTCTCAATTACAGCGCCACTTCCTCCCCTTCCCCCAAATCACCCAATCCCTAATTCAGATCCTCCAATGGGTCGTGTCATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCTCACACCCACCACCGCAAGGGTCCTGCCCGTTTCCGCTCTCTTGATTTCGGGGAGCGAAATGGTTACCTGAAAGGTGTGGTCAGTGAGATCATCCACGATCCCGGTAGGGGTGCGCCGTTGGCCCGCGTCACCTTCCGCCACCCTTTCCGCTACAAGCACCAGAAGGAGCTCTTTGTCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGAAAGAAGGCTAACCTCGTCGTCGGTAATGTGCTTCCCATCAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACAGAGGTGTGTTCGCTAGATGCTCTGGTGATTATGCCATTGTTATCAGTCACAACCCAGATAATGATACCAGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTCCCAAGTGGGTGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTGAAGGCAGGTAATGCTTACCACAAGTTCCGTGTGAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCATGCCAGTACCGTCCGCCGTGATGCCCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGTGGACAGGCTGCCGCCACTGCTTCCAAGGCTGATAAAGCTTAGAGCAATAGTTTCATGTGTTGGACGCTTATTTTGCCTAATCCTTAGCCTTTTTTCATTATGTTTGATTGGATTTGCATTGTGTTGAAGAAGACCATATTTAGAAGTTTTTGTCCCAAGTTTTGTTACAACATAGATCCTTTTTTAACATCATCCTCTCTCCTATTTTTGGTTGCTACAATGAACTTGAGAACTTCGATCAACTTAAACAGGCTTTTTAAATGTGATACAATTAC

Coding sequence (CDS)

GATAAAGCTACACCTGTTCCCAAACACCCGTCTAGGGCAACCCTCAATCGGTCTCTAAAAACCCTAATCCCCATCTTTTCTCAGTTCTCAATTACAGCGCCACTTCCTCCCCTTCCCCCAAATCACCCAATCCCTAATTCAGATCCTCCAATGGGTCGTGTCATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCTCACACCCACCACCGCAAGGGTCCTGCCCGTTTCCGCTCTCTTGATTTCGGGGAGCGAAATGGTTACCTGAAAGGTGTGGTCAGTGAGATCATCCACGATCCCGGTAGGGGTGCGCCGTTGGCCCGCGTCACCTTCCGCCACCCTTTCCGCTACAAGCACCAGAAGGAGCTCTTTGTCGCCGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGAAAGAAGGCTAACCTCGTCGTCGGTAATGTGCTTCCCATCAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATGTTGGTGACAGAGGTGTGTTCGCTAGATGCTCTGGTGATTATGCCATTGTTATCAGTCACAACCCAGATAATGATACCAGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTCCCAAGTGGGTGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTGAAGGCAGGTAATGCTTACCACAAGTTCCGTGTGAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCATGCCAGTACCGTCCGCCGTGATGCCCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGTGGACAGGCTGCCGCCACTGCTTCCAAGGCTGATAAAGCTTAG

Protein sequence

DKATPVPKHPSRATLNRSLKTLIPIFSQFSITAPLPPLPPNHPIPNSDPPMGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKADKA

Homology

[Close]

BLAST of Carg05660 vs. NCBI nr
Match: KAG7015230.1 (60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 636.3 bits (1640), Expect = 1.3e-178
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   DKATPVPKHPSRATLNRSLKTLIPIFSQFSITAPLPPLPPNHPIPNSDPPMGRVIRAQRK 60
           DKATPVPKHPSRATLNRSLKTLIPIFSQFSITAPLPPLPPNHPIPNSDPPMGRVIRAQRK
Sbjct: 1   DKATPVPKHPSRATLNRSLKTLIPIFSQFSITAPLPPLPPNHPIPNSDPPMGRVIRAQRK 60

Query: 61  GAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYK 120
           GAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYK
Sbjct: 61  GAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYK 120

Query: 121 HQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCS 180
           HQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCS
Sbjct: 121 HQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCS 180

Query: 181 GDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFR 240
           GDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFR
Sbjct: 181 GDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFR 240

Query: 241 VKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQA 300
           VKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQA
Sbjct: 241 VKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQA 300

Query: 301 AATASKADKA 311
           AATASKADKA
Sbjct: 301 AATASKADKA 310

[Close]

BLAST of Carg05660 vs. NCBI nr
Match: XP_022940519.1 (60S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal protein L8 [Cucurbita maxima] >XP_023521974.1 60S ribosomal protein L8 [Cucurbita pepo subsp. pepo] >KAG6607833.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg05660 vs. NCBI nr
Match: XP_008454581.1 (PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal protein L8 [Benincasa hispida])

HSP 1 Score: 535.4 bits (1378), Expect = 3.2e-148
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg05660 vs. NCBI nr
Match: XP_004151970.1 (60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_011442 [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 4.2e-148
Identity = 257/260 (98.85%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg05660 vs. NCBI nr
Match: XP_022139448.1 (60S ribosomal protein L8-like [Momordica charantia])

HSP 1 Score: 534.3 bits (1375), Expect = 7.2e-148
Identity = 257/259 (99.23%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADK 310
           RRTGRLRGQAAATA+KADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of Carg05660 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 7.7e-145
Identity = 243/260 (93.46%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFR+LDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDN T+R+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQA ATA+KADKA
Sbjct: 241 RRTGRLRGQARATAAKADKA 260

[Close]

BLAST of Carg05660 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 506.1 bits (1302), Expect = 2.7e-142
Identity = 240/258 (93.02%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           V FRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKAD 309
           RRTGRLRGQAAA ASKAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of Carg05660 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 3.0e-141
Identity = 238/260 (91.54%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGR+IRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFR+PFRY HQKELFVAAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSG YAIVISHNPDN T+RIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA 
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg05660 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 500.4 bits (1287), Expect = 1.5e-140
Identity = 238/258 (92.25%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKAD 309
           RRTGRLRGQAAA+A+KAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of Carg05660 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 454.1 bits (1167), Expect = 1.2e-126
Identity = 216/259 (83.40%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 51  MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 110
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 111 RVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 170
           RV FRHPFRY  QKELFVAAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 171 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 230
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 231 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 290
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 291 ARRTGRLRGQAAATASKAD 309
           ARRTGR RG AA  A+KAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of Carg05660 vs. ExPASy TrEMBL
Match: A0A6J1J2H3 (60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.4e-149
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg05660 vs. ExPASy TrEMBL
Match: A0A6J1FKG6 (60S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.4e-149
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg05660 vs. ExPASy TrEMBL
Match: A0A1S3BYI5 (60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg05660 vs. ExPASy TrEMBL
Match: A0A0A0L7L1 (Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403970 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 2.0e-148
Identity = 257/260 (98.85%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADKA 311
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg05660 vs. ExPASy TrEMBL
Match: A0A6J1CFM0 (60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.5e-148
Identity = 257/259 (99.23%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKADK 310
           RRTGRLRGQAAATA+KADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of Carg05660 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 506.1 bits (1302), Expect = 1.9e-143
Identity = 240/258 (93.02%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           V FRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKAD 309
           RRTGRLRGQAAA ASKAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of Carg05660 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-141
Identity = 238/258 (92.25%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170
           VTFRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 291 RRTGRLRGQAAATASKAD 309
           RRTGRLRGQAAA+A+KAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of Carg05660 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 454.1 bits (1167), Expect = 8.8e-128
Identity = 216/259 (83.40%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 51  MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 110
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 111 RVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 170
           RV FRHPFRY  QKELFVAAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 171 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 230
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 231 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 290
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 291 ARRTGRLRGQAAATASKAD 309
           ARRTGR RG AA  A+KAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of Carg05660 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-22
Identity = 65/215 (30.23%), Postives = 104/215 (48.37%), Query Frame = 0


Query: 54  VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 113
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 114 RHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDR 173
                   +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 174 GVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG 233
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 234 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 265
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

[Close]

BLAST of Carg05660 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-22
Identity = 65/215 (30.23%), Postives = 104/215 (48.37%), Query Frame = 0


Query: 54  VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 113
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 114 RHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDR 173
                   +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 174 GVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG 233
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 234 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 265
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:

BLAST of Carg05660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015230.1	1.3e-178	100.00	60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022940519.1	1.1e-148	100.00	60S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal prot...	[more]
XP_008454581.1	3.2e-148	99.23	PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal...	[more]
XP_004151970.1	4.2e-148	98.85	60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_...	[more]
XP_022139448.1	7.2e-148	99.23	60S ribosomal protein L8-like [Momordica charantia]	[more]

BLAST of Carg05660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29766	7.7e-145	93.46	60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1	[more]
Q42064	2.7e-142	93.02	60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2	[more]
P25998	3.0e-141	91.54	60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1	[more]
P46286	1.5e-140	92.25	60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2	[more]
Q4PSL7	1.2e-126	83.40	60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3	[more]

BLAST of Carg05660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2H3	5.4e-149	100.00	60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1	[more]
A0A6J1FKG6	5.4e-149	100.00	60S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1	[more]
A0A1S3BYI5	1.6e-148	99.23	60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1	[more]
A0A0A0L7L1	2.0e-148	98.85	Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403...	[more]
A0A6J1CFM0	3.5e-148	99.23	60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=...	[more]

BLAST of Carg05660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36130.1	1.9e-143	93.02	Ribosomal protein L2 family	[more]
AT2G18020.1	1.1e-141	92.25	Ribosomal protein L2 family	[more]
AT3G51190.1	8.8e-128	83.40	Ribosomal protein L2 family	[more]
ATCG00830.1	2.9e-22	30.23	ribosomal protein L2	[more]
ATCG01310.1	2.9e-22	30.23	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 61..140 e-value: 1.1E-33 score: 127.9
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 41..305 e-value: 3.6E-70 score: 234.2
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 51..310
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 146..281 e-value: 4.2E-68 score: 242.2
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 148..274 e-value: 1.3E-44 score: 151.3
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 140..219 e-value: 2.5E-25 score: 90.2
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 63..140 e-value: 4.0E-18 score: 65.1
None	No IPR available	GENE3D	2.40.50.140		coord: 51..136 e-value: 1.4E-40 score: 139.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..280
None	No IPR available	PANTHER	PTHR13691:SF48	60S RIBOSOMAL PROTEIN L8	coord: 51..310
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 220..297 e-value: 2.6E-43 score: 148.3
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 247..258
IPR023672	Ribosomal protein L2, archaeal-type	HAMAP	MF_01320_A	Ribosomal_L2_A	coord: 51..296 score: 35.063789
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 149..296
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 50..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05660-RA	Carg05660-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome