Carg17518 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17518
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 39-like
LocationCarg_Chr12: 11394259 .. 11395578 (+)
RNA-Seq ExpressionCarg17518
SyntenyCarg17518
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTCAATGATATTCGAGGCTCTGTTATACCGCCGCCTCTGCATCCTTATGGAGCCAATGGCGATGCCACTGGTTGCTGGTCTCAGTATCCTAGGAACGATCCATTTGATACACAATCGCAATTTGAACCACAGCAGCCTCCATTCAAAAGAGCTAGAAATTCTGAAGAAAACCTATCTAGAGTTCAAAATGGTCCAGTGAATAAAGGAATAAACAATATCTTCTTCAAGACAAGGATGTGTGCGAAATTCAAGCTTGGTTTGTGTAGGAATGGAGCGAATTGCAACTTTGCTCATGGTGCTGAAGACATGCGACAACCCCCACCAAATTGGCAAGAAATTGTGGGGATTCGTGAGGATGATCAATCAGTAAGTAACTGGAATGATGATCAGAAAATTATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGGGAGGAATGCCCTTATGGAGATAGGTGCAATTTTCTTCATGAAGATCCTGCTAAATTTAGAGATGATTCTGGTAGGTTTAGGGAAAGTTCAGCTATAAGCATTGGAACTACTGTAACTCCATTGATGAATGGTAATGATTCTAGCTATTCTGAACCTAGCAGAGCTGTTTCTTGTTCTGCTTCTGCTTCTGATTCTCTTCGAGGTAATGGAAATGCATTCTGGAAGACGAAGTTATGCACTAAGTGGGAGGTTACTGGTCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGGTATTGATACCTCTCCTTTTCTCTTTCTCTGTAATGTGTAATACTGTCATAACATGTGGATTGGAATTCTTGATGAACTGAAAATCATGATATGCTTTGAACGATCTTCATAGTTAACACAACCATGTTCAAACACATTTGTTTCTTCTCGAGCATTCGAAAGTCGTTCCAAACAAACTCTTAATTTATTTAGTATCTTTGTCTTGGCGTCCTCTTTGAAGCGTTTGACATTGTGTGATTATACTACTTTGGGATGTTTTAATTTCCTCTTTGGAGCGTTTGACATTGTGTGATTATACTACTTCGGGATGTTGACTGTTCTTTATGGATCAGAGTTACAACTCTCACTTGGACGCGAGGGGGAAGTATCTAATCCTGCCCTCAACATTAATCCTGTAGTTGTGGCCATGGAAGCATCTCCGAGTTTGGCAGCGAGTGTCGCGACCTCTTCCCTACCAGAGGGTCAGGCGAAGCCGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTTGATGATTTGCCTCTATCTCCAACCTCAGCCAGCAAATTGGAG

mRNA sequence

ATGAGTTTCAATGATATTCGAGGCTCTGTTATACCGCCGCCTCTGCATCCTTATGGAGCCAATGGCGATGCCACTGGTTGCTGGTCTCAGTATCCTAGGAACGATCCATTTGATACACAATCGCAATTTGAACCACAGCAGCCTCCATTCAAAAGAGCTAGAAATTCTGAAGAAAACCTATCTAGAGTTCAAAATGGTCCAGTGAATAAAGGAATAAACAATATCTTCTTCAAGACAAGGATGTGTGCGAAATTCAAGCTTGGTTTGTGTAGGAATGGAGCGAATTGCAACTTTGCTCATGGTGCTGAAGACATGCGACAACCCCCACCAAATTGGCAAGAAATTGTGGGGATTCGTGAGGATGATCAATCAGTAAGTAACTGGAATGATGATCAGAAAATTATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGGGAGGAATGCCCTTATGGAGATAGGTGCAATTTTCTTCATGAAGATCCTGCTAAATTTAGAGATGATTCTGGTAGGTTTAGGGAAAGTTCAGCTATAAGCATTGGAACTACTGTAACTCCATTGATGAATGGTAATGATTCTAGCTATTCTGAACCTAGCAGAGCTGTTTCTTGTTCTGCTTCTGCTTCTGATTCTCTTCGAGGTAATGGAAATGCATTCTGGAAGACGAAGTTATGCACTAAGTGGGAGGTTACTGGTCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTCTCACTTGGACGCGAGGGGGAAGTATCTAATCCTGCCCTCAACATTAATCCTGTAGTTGTGGCCATGGAAGCATCTCCGAGTTTGGCAGCGAGTGTCGCGACCTCTTCCCTACCAGAGGGTCAGGCGAAGCCGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTTGATGATTTGCCTCTATCTCCAACCTCAGCCAGCAAATTGGAG

Coding sequence (CDS)

ATGAGTTTCAATGATATTCGAGGCTCTGTTATACCGCCGCCTCTGCATCCTTATGGAGCCAATGGCGATGCCACTGGTTGCTGGTCTCAGTATCCTAGGAACGATCCATTTGATACACAATCGCAATTTGAACCACAGCAGCCTCCATTCAAAAGAGCTAGAAATTCTGAAGAAAACCTATCTAGAGTTCAAAATGGTCCAGTGAATAAAGGAATAAACAATATCTTCTTCAAGACAAGGATGTGTGCGAAATTCAAGCTTGGTTTGTGTAGGAATGGAGCGAATTGCAACTTTGCTCATGGTGCTGAAGACATGCGACAACCCCCACCAAATTGGCAAGAAATTGTGGGGATTCGTGAGGATGATCAATCAGTAAGTAACTGGAATGATGATCAGAAAATTATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGGGAGGAATGCCCTTATGGAGATAGGTGCAATTTTCTTCATGAAGATCCTGCTAAATTTAGAGATGATTCTGGTAGGTTTAGGGAAAGTTCAGCTATAAGCATTGGAACTACTGTAACTCCATTGATGAATGGTAATGATTCTAGCTATTCTGAACCTAGCAGAGCTGTTTCTTGTTCTGCTTCTGCTTCTGATTCTCTTCGAGGTAATGGAAATGCATTCTGGAAGACGAAGTTATGCACTAAGTGGGAGGTTACTGGTCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTCTCACTTGGACGCGAGGGGGAAGTATCTAATCCTGCCCTCAACATTAATCCTGTAGTTGTGGCCATGGAAGCATCTCCGAGTTTGGCAGCGAGTGTCGCGACCTCTTCCCTACCAGAGGGTCAGGCGAAGCCGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTTGATGATTTGCCTCTATCTCCAACCTCAGCCAGCAAATTGGAG

Protein sequence

MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE
Homology
BLAST of Carg17518 vs. NCBI nr
Match: KAG7021260.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 694.1 bits (1790), Expect = 5.7e-196
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL
Sbjct: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60

Query: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120
           SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE
Sbjct: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120

Query: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180
           DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS
Sbjct: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180

Query: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240
           IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK
Sbjct: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240

Query: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300
           CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
Sbjct: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300

Query: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 330
           WKGPKKINRIYADWLDDLPLSPTSASKLE
Sbjct: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 329

BLAST of Carg17518 vs. NCBI nr
Match: KAG6586406.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 694.1 bits (1790), Expect = 5.7e-196
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL
Sbjct: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60

Query: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120
           SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE
Sbjct: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120

Query: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180
           DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS
Sbjct: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180

Query: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240
           IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK
Sbjct: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240

Query: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300
           CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
Sbjct: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300

Query: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 330
           WKGPKKINRIYADWLDDLPLSPTSASKLE
Sbjct: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 329

BLAST of Carg17518 vs. NCBI nr
Match: XP_022937467.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata])

HSP 1 Score: 677.2 bits (1746), Expect = 7.3e-191
Identity = 324/329 (98.48%), Postives = 325/329 (98.78%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFNDIRGSVIPPPLHPYGA+ DATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEENL
Sbjct: 1   MSFNDIRGSVIPPPLHPYGAS-DATGCWSQYPRNDLFDTQSQFEPQLPPFKRARNSEENL 60

Query: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120
           SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE
Sbjct: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120

Query: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180
           DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS
Sbjct: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180

Query: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240
           IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK
Sbjct: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240

Query: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300
           CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATS LPEGQAKPCLLK
Sbjct: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSPLPEGQAKPCLLK 300

Query: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 330
           WKGPKKINRIYADWLDDLPLSPTSASKLE
Sbjct: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 328

BLAST of Carg17518 vs. NCBI nr
Match: XP_022965837.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita maxima])

HSP 1 Score: 669.1 bits (1725), Expect = 2.0e-188
Identity = 318/329 (96.66%), Postives = 322/329 (97.87%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           M+FNDIRGSVIPPPLHPYGANGDATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEEN 
Sbjct: 1   MNFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDLFDTQSQFEPQLPPFKRARNSEENQ 60

Query: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120
           SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE
Sbjct: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120

Query: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180
           DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS
Sbjct: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180

Query: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240
           IGTTVTPLMNGNDSSYSEPSRAVSC   ASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK
Sbjct: 181 IGTTVTPLMNGNDSSYSEPSRAVSC--PASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240

Query: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300
           CHFAHGQSELQLSLGREG+VSNPALNINP+VVAMEASPSLAASVATS LPEGQAKPCLLK
Sbjct: 241 CHFAHGQSELQLSLGREGQVSNPALNINPLVVAMEASPSLAASVATSPLPEGQAKPCLLK 300

Query: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 330
           WKGPKKINRIYADWLDDLPLSPTSASKL+
Sbjct: 301 WKGPKKINRIYADWLDDLPLSPTSASKLD 327

BLAST of Carg17518 vs. NCBI nr
Match: XP_023536864.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 665.6 bits (1716), Expect = 2.2e-187
Identity = 316/329 (96.05%), Postives = 322/329 (97.87%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEEN 
Sbjct: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDLFDTQSQFEPQLPPFKRARNSEENQ 60

Query: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120
           SRVQNGP+NKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE
Sbjct: 61  SRVQNGPMNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120

Query: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180
           DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS
Sbjct: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180

Query: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240
           IGTTVTPL NGNDSSYSEPSRAVSC  SASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK
Sbjct: 181 IGTTVTPLTNGNDSSYSEPSRAVSC--SASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240

Query: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300
           CHFAHG+SELQLSLGREGEVSNPALNINP+VVAMEASP+LAASVATS LPEGQAKPCLLK
Sbjct: 241 CHFAHGRSELQLSLGREGEVSNPALNINPLVVAMEASPNLAASVATSPLPEGQAKPCLLK 300

Query: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 330
           WKGPKKINRIYADWL+DLPLSPTSA+KLE
Sbjct: 301 WKGPKKINRIYADWLEDLPLSPTSANKLE 327

BLAST of Carg17518 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.3e-77
Identity = 165/341 (48.39%), Postives = 202/341 (59.24%), Query Frame = 0

Query: 38  DTQSQFEPQ---QPPFKRARNSEENLSRVQNG------------------PVNKGINNIF 97
           ++QSQ +P    QP  KR R  ++NL    +                   PVNKG  NIF
Sbjct: 45  ESQSQSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPPPVNKGTANIF 104

Query: 98  FKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVG------------IREDDQS 157
           +KTRMCAKF+ G CRNG  CNFAHG ED+RQPP NWQEIVG             RE ++ 
Sbjct: 105 YKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERE 164

Query: 158 --------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRES 217
                    +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RES
Sbjct: 165 RPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRES 224

Query: 218 SAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRG-NGNAFWKTKLCTKWEVTGHC 277
           S IS+G T     +   S+  E +R  S    A  +  G     +WKT+LC K+++TG C
Sbjct: 225 SVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQC 284

Query: 278 PFGDKCHFAHGQSELQLSLGR-EGEVSNPALNIN--PVVVAMEA---SPSLAASVATSSL 330
           PFGDKCHFAHGQ+EL  S+GR EGE  N   ++N   VV A EA    P    +  +S L
Sbjct: 285 PFGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGL 344

BLAST of Carg17518 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.6e-45
Identity = 114/354 (32.20%), Postives = 166/354 (46.89%), Query Frame = 0

Query: 20  ANGDATGCW-------SQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGI 79
           A G   G W       SQ+  +      S+   +QPP  +            N   ++ I
Sbjct: 24  AQGGDAGIWATEDDYNSQWNADGGGGGSSRAGSEQPPPGKKSRGGGGGEGGGNTSKSRAI 83

Query: 80  NNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQ 139
             +FFKT++C KF+ G C    NCNFAHG E++R+PPPNWQEIV   E+    +   ++ 
Sbjct: 84  GKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEE---ATEAREEH 143

Query: 140 KI--------------------------IQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 199
           +I                            K + C+KFY  E CPYGD C FLH      
Sbjct: 144 QIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLH------ 203

Query: 200 RDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLC 259
            D+  + RES AIS+  +V     G   SY+  + A + +++A+ +      + WKT++C
Sbjct: 204 -DEQSKARESVAISLSPSVGG--GGGGGSYNSAAAAAASASAAAGNGPMQKPSNWKTRIC 263

Query: 260 TKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINP---VVVAMEASPSLAAS 318
            KWE+TG+CPFG KCHFAHG +EL    G   ++ +      P     V    +P+  A+
Sbjct: 264 NKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRDAAATPDSKQAVVSAKAPAETAA 323

BLAST of Carg17518 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.0e-43
Identity = 116/365 (31.78%), Postives = 164/365 (44.93%), Query Frame = 0

Query: 18  YGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVN---KGINN 77
           +    D    W+  P N   D         PP K+ R S  + S       +   K I  
Sbjct: 36  WATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGSPSSSSATTTSAASNRTKAIGK 95

Query: 78  IFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKI 137
           +FFKT++C KF+ G C    NCNFAH  E++R+PPPNWQEIV   E+++S         +
Sbjct: 96  MFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSV 155

Query: 138 IQ----------------------KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGR 197
           ++                      K + C+KFY  E CPYG+ C FLH       D++ R
Sbjct: 156 VEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLH-------DEASR 215

Query: 198 FRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSL-------RGNGNAF----- 257
            RES AIS+G    P   G+         +V    S+S+ +        G+G+       
Sbjct: 216 NRESVAISLG----PGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGSGIQILKP 275

Query: 258 --WKTKLCTKWEVTGHCPFGDKCHFAHGQSELQL-------SLGREGEVSNPALN----- 317
             WKT++C KWE+TG+CPFG KCHFAHG +EL           G++G   NP        
Sbjct: 276 SNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPDTKQTVQN 335

Query: 318 ----------INPVV---VAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYAD 319
                     ++P V           +A   A+S++ +        KWKGP KI+RIY D
Sbjct: 336 PKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQKPGIRTHQKWKGPAKISRIYGD 383

BLAST of Carg17518 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-22
Identity = 90/331 (27.19%), Postives = 130/331 (39.27%), Query Frame = 0

Query: 12  PPPLHPYGANGDATGCWSQYPRNDPFDT--QSQFEPQQPPFKRARNSEENLSRVQNGPVN 71
           PPP + +  +GD+    S +   D +        +  + P K+ R+S            +
Sbjct: 20  PPPENCFPNSGDS----SVWATEDDYSRVWAINSDGAESPSKKTRSSS-----------S 79

Query: 72  KGINNIFFKTRMCAKFKLGLC-RNGANCNFAHGAEDMR---QPPPNWQEIVGIREDDQSV 131
             I   FFKT++C KF+ G C  + ++C+FAH AE++R    PPPNWQE V         
Sbjct: 80  SEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETV--------- 139

Query: 132 SNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTV 191
                                                      ++ R RES A+S+G   
Sbjct: 140 ------------------------------------------TEASRNRESFAVSLGP-- 199

Query: 192 TPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAH 251
                GN                 + +L+      WKT++C KW+ TG+CPFG  CHFAH
Sbjct: 200 ----RGN----------------VAQTLKSPN---WKTRICNKWQTTGYCPFGSHCHFAH 251

Query: 252 GQSELQ------------------LSLGREGEVSNPALNINPVVVAMEASPSLAASVATS 311
           G SEL                   L   + G+V      ++P V       S   S A +
Sbjct: 260 GPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGV------SSQRTSSAVT 251

Query: 312 SLPEGQAKPCLLKWKGPKKINRIYADWLDDL 319
             P G       KWKGP KI+R+Y DW+DD+
Sbjct: 320 QKPNGVRTQ--RKWKGPDKISRVYGDWIDDI 251

BLAST of Carg17518 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-10
Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = 0

Query: 137 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSY 196
           K+K C KF++   CP+G+ C+F H  P  ++                 V   +N  + + 
Sbjct: 39  KLKPCTKFFSTIGCPFGEGCHFSHFVPGGYQ----------------AVAKTLNLGNPAV 98

Query: 197 SEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSEL 251
             P+RA    A+  +S   +     KT++CTK+     C FGDKCHFAHG+ EL
Sbjct: 99  PAPARAPMDHAAGGNSHPASSG---KTRMCTKYNTAEGCKFGDKCHFAHGEREL 133

BLAST of Carg17518 vs. ExPASy TrEMBL
Match: A0A6J1FBA3 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111443870 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 3.5e-191
Identity = 324/329 (98.48%), Postives = 325/329 (98.78%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFNDIRGSVIPPPLHPYGA+ DATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEENL
Sbjct: 1   MSFNDIRGSVIPPPLHPYGAS-DATGCWSQYPRNDLFDTQSQFEPQLPPFKRARNSEENL 60

Query: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120
           SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE
Sbjct: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120

Query: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180
           DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS
Sbjct: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180

Query: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240
           IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK
Sbjct: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240

Query: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300
           CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATS LPEGQAKPCLLK
Sbjct: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSPLPEGQAKPCLLK 300

Query: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 330
           WKGPKKINRIYADWLDDLPLSPTSASKLE
Sbjct: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 328

BLAST of Carg17518 vs. ExPASy TrEMBL
Match: A0A6J1HLD8 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111465601 PE=4 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 9.6e-189
Identity = 318/329 (96.66%), Postives = 322/329 (97.87%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           M+FNDIRGSVIPPPLHPYGANGDATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEEN 
Sbjct: 1   MNFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDLFDTQSQFEPQLPPFKRARNSEENQ 60

Query: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120
           SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE
Sbjct: 61  SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIRE 120

Query: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180
           DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS
Sbjct: 121 DDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAIS 180

Query: 181 IGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240
           IGTTVTPLMNGNDSSYSEPSRAVSC   ASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK
Sbjct: 181 IGTTVTPLMNGNDSSYSEPSRAVSC--PASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDK 240

Query: 241 CHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK 300
           CHFAHGQSELQLSLGREG+VSNPALNINP+VVAMEASPSLAASVATS LPEGQAKPCLLK
Sbjct: 241 CHFAHGQSELQLSLGREGQVSNPALNINPLVVAMEASPSLAASVATSPLPEGQAKPCLLK 300

Query: 301 WKGPKKINRIYADWLDDLPLSPTSASKLE 330
           WKGPKKINRIYADWLDDLPLSPTSASKL+
Sbjct: 301 WKGPKKINRIYADWLDDLPLSPTSASKLD 327

BLAST of Carg17518 vs. ExPASy TrEMBL
Match: A0A6J1G2M8 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111450240 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.3e-163
Identity = 284/346 (82.08%), Postives = 303/346 (87.57%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFND+RGSVIPPPLH YGANGDA+GCWSQYPRND FD QSQFE QQPPFKRARN EEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 60

Query: 61  ------------SRVQ--NGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMR 120
                       SRVQ  N P+NKGINNIFFKTRMCAKFKLGLCRNGA+CNFAHG EDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGN---AFWKT 240
           RDDSGRFRESSAISIGTT TPL+NG+DSSY EP +A   S+S  D+LR NGN   +FWKT
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPIKA--ASSSVPDALRANGNSRPSFWKT 240

Query: 241 KLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAAS 300
           KLCTKWE+TGHCPFG+KCHFAHGQSELQLS+GREGEVSN ALN+ P+VVAMEA  SLA S
Sbjct: 241 KLCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEVSNTALNVKPLVVAMEAPSSLATS 300

Query: 301 VATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE 330
           V +S+LPEGQAK  LLKWKGPKKINRIYADWLDDLPLSP+S S+LE
Sbjct: 301 VPSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLE 344

BLAST of Carg17518 vs. ExPASy TrEMBL
Match: A0A5A7V7E5 (Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00080 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 283/348 (81.32%), Postives = 302/348 (86.78%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFND+RGSVIPPPLH YG+NGDA+GCWSQ+PRNDPFD QSQFE QQPP+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  S--------------RVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMR 120
           S                 N PVNKGI+NIFFKTRMCAKFKLGLCRNGA+CNFAHG EDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTVTPLMNGND-SSYSEPSRAVSCSASASDSLRGNGN---AFWK 240
           RDDSGRFRESSAISIGTT TPLMNG+D SSY EPSRA SC  S SD+LR NGN   +FWK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSC--SVSDALRANGNVRPSFWK 240

Query: 241 TKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAA 300
           TKLCTKWE+TGHCPFGDKCHFAHGQSELQL +GREGEVS  ALN+ P++VAMEAS SL  
Sbjct: 241 TKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTT 300

Query: 301 SVATSS-LPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE 330
           SV  SS LPEGQAKP LLKWKGPKKINRIYADWLDDLPLSP+S SK+E
Sbjct: 301 SVLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 346

BLAST of Carg17518 vs. ExPASy TrEMBL
Match: A0A1S3C7N3 (zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103497405 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 283/348 (81.32%), Postives = 302/348 (86.78%), Query Frame = 0

Query: 1   MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL 60
           MSFND+RGSVIPPPLH YG+NGDA+GCWSQ+PRNDPFD QSQFE QQPP+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  S--------------RVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMR 120
           S                 N PVNKGI+NIFFKTRMCAKFKLGLCRNGA+CNFAHG EDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTVTPLMNGND-SSYSEPSRAVSCSASASDSLRGNGN---AFWK 240
           RDDSGRFRESSAISIGTT TPLMNG+D SSY EPSRA SC  S SD+LR NGN   +FWK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSC--SVSDALRANGNVRPSFWK 240

Query: 241 TKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAA 300
           TKLCTKWE+TGHCPFGDKCHFAHGQSELQL +GREGEVS  ALN+ P++VAMEAS SL  
Sbjct: 241 TKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTT 300

Query: 301 SVATSS-LPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE 330
           SV  SS LPEGQAKP LLKWKGPKKINRIYADWLDDLPLSP+S SK+E
Sbjct: 301 SVLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 346

BLAST of Carg17518 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 289.7 bits (740), Expect = 3.0e-78
Identity = 165/341 (48.39%), Postives = 202/341 (59.24%), Query Frame = 0

Query: 38  DTQSQFEPQ---QPPFKRARNSEENLSRVQNG------------------PVNKGINNIF 97
           ++QSQ +P    QP  KR R  ++NL    +                   PVNKG  NIF
Sbjct: 45  ESQSQSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPPPVNKGTANIF 104

Query: 98  FKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVG------------IREDDQS 157
           +KTRMCAKF+ G CRNG  CNFAHG ED+RQPP NWQEIVG             RE ++ 
Sbjct: 105 YKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERE 164

Query: 158 --------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRES 217
                    +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RES
Sbjct: 165 RPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRES 224

Query: 218 SAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRG-NGNAFWKTKLCTKWEVTGHC 277
           S IS+G T     +   S+  E +R  S    A  +  G     +WKT+LC K+++TG C
Sbjct: 225 SVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQC 284

Query: 278 PFGDKCHFAHGQSELQLSLGR-EGEVSNPALNIN--PVVVAMEA---SPSLAASVATSSL 330
           PFGDKCHFAHGQ+EL  S+GR EGE  N   ++N   VV A EA    P    +  +S L
Sbjct: 285 PFGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGL 344

BLAST of Carg17518 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 2.9e-44
Identity = 116/365 (31.78%), Postives = 164/365 (44.93%), Query Frame = 0

Query: 18  YGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVN---KGINN 77
           +    D    W+  P N   D         PP K+ R S  + S       +   K I  
Sbjct: 36  WATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGSPSSSSATTTSAASNRTKAIGK 95

Query: 78  IFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKI 137
           +FFKT++C KF+ G C    NCNFAH  E++R+PPPNWQEIV   E+++S         +
Sbjct: 96  MFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSV 155

Query: 138 IQ----------------------KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGR 197
           ++                      K + C+KFY  E CPYG+ C FLH       D++ R
Sbjct: 156 VEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLH-------DEASR 215

Query: 198 FRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSL-------RGNGNAF----- 257
            RES AIS+G    P   G+         +V    S+S+ +        G+G+       
Sbjct: 216 NRESVAISLG----PGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGSGIQILKP 275

Query: 258 --WKTKLCTKWEVTGHCPFGDKCHFAHGQSELQL-------SLGREGEVSNPALN----- 317
             WKT++C KWE+TG+CPFG KCHFAHG +EL           G++G   NP        
Sbjct: 276 SNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPDTKQTVQN 335

Query: 318 ----------INPVV---VAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYAD 319
                     ++P V           +A   A+S++ +        KWKGP KI+RIY D
Sbjct: 336 PKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQKPGIRTHQKWKGPAKISRIYGD 383

BLAST of Carg17518 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-23
Identity = 90/331 (27.19%), Postives = 130/331 (39.27%), Query Frame = 0

Query: 12  PPPLHPYGANGDATGCWSQYPRNDPFDT--QSQFEPQQPPFKRARNSEENLSRVQNGPVN 71
           PPP + +  +GD+    S +   D +        +  + P K+ R+S            +
Sbjct: 20  PPPENCFPNSGDS----SVWATEDDYSRVWAINSDGAESPSKKTRSSS-----------S 79

Query: 72  KGINNIFFKTRMCAKFKLGLC-RNGANCNFAHGAEDMR---QPPPNWQEIVGIREDDQSV 131
             I   FFKT++C KF+ G C  + ++C+FAH AE++R    PPPNWQE V         
Sbjct: 80  SEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETV--------- 139

Query: 132 SNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTV 191
                                                      ++ R RES A+S+G   
Sbjct: 140 ------------------------------------------TEASRNRESFAVSLGP-- 199

Query: 192 TPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAH 251
                GN                 + +L+      WKT++C KW+ TG+CPFG  CHFAH
Sbjct: 200 ----RGN----------------VAQTLKSPN---WKTRICNKWQTTGYCPFGSHCHFAH 251

Query: 252 GQSELQ------------------LSLGREGEVSNPALNINPVVVAMEASPSLAASVATS 311
           G SEL                   L   + G+V      ++P V       S   S A +
Sbjct: 260 GPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGV------SSQRTSSAVT 251

Query: 312 SLPEGQAKPCLLKWKGPKKINRIYADWLDDL 319
             P G       KWKGP KI+R+Y DW+DD+
Sbjct: 320 QKPNGVRTQ--RKWKGPDKISRVYGDWIDDI 251

BLAST of Carg17518 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 30/107 (28.04%), Postives = 48/107 (44.86%), Query Frame = 0

Query: 78  KTRMCAKF-KLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQ 137
           KT +C K+ + G C  G +C FAHG +++R           IR                 
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELRPV---------IRHPR-------------Y 283

Query: 138 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGT 184
           K ++CR    G+ CPYG RC+F H    + +  +  F+  S++ + T
Sbjct: 284 KTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT 308

BLAST of Carg17518 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 30/107 (28.04%), Postives = 48/107 (44.86%), Query Frame = 0

Query: 78  KTRMCAKF-KLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQ 137
           KT +C K+ + G C  G +C FAHG +++R           IR                 
Sbjct: 223 KTELCNKWQETGTCPYGDHCQFAHGIKELRPV---------IRHPR-------------Y 282

Query: 138 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGT 184
           K ++CR    G+ CPYG RC+F H    + +  +  F+  S++ + T
Sbjct: 283 KTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT 307

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7021260.15.7e-196100.00Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s... [more]
KAG6586406.15.7e-196100.00Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s... [more]
XP_022937467.17.3e-19198.48zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata][more]
XP_022965837.12.0e-18896.66zinc finger CCCH domain-containing protein 39-like [Cucurbita maxima][more]
XP_023536864.12.2e-18796.05zinc finger CCCH domain-containing protein 39-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9LT814.3e-7748.39Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q84UQ39.6e-4532.20Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX... [more]
Q9LQM34.0e-4331.78Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q5PP653.0e-2227.19Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q7XPK11.6e-1032.46Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX... [more]
Match NameE-valueIdentityDescription
A0A6J1FBA33.5e-19198.48zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1HLD89.6e-18996.66zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1G2M85.3e-16382.08zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662... [more]
A0A5A7V7E52.0e-16281.32Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3C7N32.0e-16281.32zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LO... [more]
Match NameE-valueIdentityDescription
AT3G19360.13.0e-7848.39Zinc finger (CCCH-type) family protein [more]
AT1G32360.12.9e-4431.78Zinc finger (CCCH-type) family protein [more]
AT2G35430.12.1e-2327.19Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT1G68200.12.6e-0528.04Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT1G68200.22.6e-0528.04Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 220..247
e-value: 1.7E-7
score: 40.9
coord: 76..102
e-value: 0.0031
score: 26.7
coord: 135..162
e-value: 4.1E-5
score: 33.0
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 136..160
e-value: 1.3E-7
score: 31.3
coord: 77..101
e-value: 7.8E-5
score: 22.5
coord: 221..247
e-value: 7.7E-11
score: 41.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 135..163
score: 15.403383
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 220..248
score: 16.088787
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 76..103
score: 13.929295
NoneNo IPR availableGENE3D4.10.1000.10coord: 216..252
e-value: 2.9E-15
score: 57.4
coord: 70..107
e-value: 2.8E-10
score: 41.4
coord: 135..164
e-value: 2.5E-7
score: 31.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..65
NoneNo IPR availablePANTHERPTHR12547:SF121ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39coord: 1..319
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 1..319
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 219..251
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 74..107
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 135..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17518-RACarg17518-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding