Carg10353 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10353
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase SIS3-like
Location	Carg_Chr10: 569970 .. 574855 (-)
RNA-Seq Expression	Carg10353
Synteny	Carg10353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCGTCTCTCACCGCTTTGCTCTACTGCTCATATTGCTCATTTCTCTTCTTCTGCCTCCAAAATTTCGCTCCTGTTGTTCTATCCATGATCCTACGAGAACCAGCTCTTGTTCTCGTGATTATTTCCGATTCATTGCCATCAGATTCGATCAGGCTTCTGCACCGTCGTATGGCGGTTTGTGATTCTCCATCCAGCTTGTTCTAGTGAAAATTTCTCTCATCTATGGCTGCTCGAGGGGTCGATTTCAAGTGGTGAGTCTTTCAGGCCTCGCTCTTCAACTCAATGAAATTCTGTTTTAGCATAATCTACAGTATGGTGCCGGAGCAGTACTTCGTAGTTAGCTTGATAGGCTTTTGCGACTTATTTCATCTTTTTGCAGGTACGACGGTTTTTTCTTGTCGATGCTCGCGATTAGTGTGTATCCTTCAGTGTTTTGGGGAATTTTAGAGTTTGTTTGTATCGGATTCTTTTCAGTCTTTTACAATTGTTGAATGATGACTCATGACTGCTGCATTTACTTTTATGGTTTGCTTTTTCACTTATTGTTTAGCCATGATTTGAAGCTTGAGTGGATTTGCTCTTTATATTTCTTTGGTATTAGAGTTTGAAACGAGACATACTCATATCCTATGCTTTAAAATCAAGAGCAATGTCTTTCTCTTAACGTTTTTTATTTGTGTATTTTCTTTAACTATTTTGCTCGATAGAGTAGTTGTTTCGATCAACTGGAAGAGGTACCATCCTTGTGTACATCCCTTGCATATATGGATTTTGGTAAGTTGTACTCAACTTTCAACCAGTATCAGATATTATTATTAATTTGTTGTTTTCTCTTGTAATTTTTTGGAACTCAACGATAGTTTGTTTATTTATTTTTTATTGTTATTTGTTGTACAGGTTGATTATACTACCGTCTTTGTTTTCCGTCTGCTGATGTTTGTAGATAATGGACTTGCTGCTGGAATGGGTTTGTAAGGCTTCCAACTTATAGTTTTACGTCAATTTGGGCTAGCAAAATCGTACAGTTCTTCTATTAATTCTCCGTTTGTGAAAAGCTTTATAGAGATATTGTGTTGTCAGAAAGTAAATTAAAGGAGAAAAATGTTTCTCCAATACCTTCATTATGGATGGTATGGTTTGATCTTAACAGTTTTAATTATTGGGGCAAAGATCAAAACAAACATCGATTCTGACGTGCAAAGATTATGGACTTTTGACTCCTCATCAGAAGCATGGTGACCGAAGTGTGAAAAAGAAAAGAAAAGAAAAGAACATCTGTTGCTGATTTAAAGAATTATGTTCTGTTTGCCAAATTTGTTTTATTCTCTTGGGGGTAATTATGAATCTTCAAGTCATGAATGTTCACTTTCTGGTTTTATGTTGAATTACTATAAACCTTATTTCATTTGGGAATGGGGATGCTGCATAAGTTTTTCTATACAAGTCAATTACATTTGACCAAGAGGTCTATAACTGACAAATGTTTATACCCCTGAATTAATTATTTAGTTATATACATCCACACCTGCCTCTCCCCCCCATTTTAATTGACAATACGTTTTTCTCGCTCTATTTTTCTTTTGCAATATTTCTGGTTTGGTAGATGCCATTGGAGATTTTCTTGTCTTCTAAACTTGTGTATCGTAGGGACTTTGGGTGGCAGCAGAGGTATGCTCGATTTTGTGGAAGAATTGTGGTCCTTTCAATCCTTGCACTTCTGCTATATCCATTTCTTTGGGCTTGGACTGCCATCGGTACTTTATGGTTCAGAGAAGCCCATAAATGTGTATGTTATTTTCTATTTCAACTCCCATCGCTACCATTTGAATTTTCATACTTTTTTTAAATATTTATGGAGGTATTGGTTTAAATCTGTCAGCTTTTTGAGCAAGGCCAGAAATGGGGATTCCTTATTTGGCTTCTTTTTAGCTACTGTGCACTCGTATGCATTGCTTGCGTGTCATTGGGAAAGGTTGGTTCTATTATGTTTACTATGCAGATTATCATTGGAGTTCATTATGAATTACGTCTAGACTCTCCAATAATTTGTAGCTTGGCTAACAGTTGTTTTTATGTGCCACTTACACTTTTTAACGTGTTCATGTTGAAAATTCTCAAATATTTTTCTTTATTTATACATGAAATTCATGTAGTTATCTTTGAAACCTCCATGTAGTGGTTAACTCGTAGACAAGCACTCTTGTTTCGGGCGCAACAAGGGATCCCTGTATCAGAATACGGGGTAAGCAATTAAGCTTCCTGCCTTCTTAGATTTTGGAACTTAAAGGATGTGCATTAATTTTCTTTCTACGTTATCAATTTTTCTGCCTGATATTTGCAATGACGTCCATAGATCACCTATATTATATGCATATCTACTTTTATAAATTTTTTCTACAATATATTCTTTGCTTTCAATTAAAAAAAAAACCATTTTTTTGCCTGGTGATTCTTACAAAATGCAAACACCCGATGAATTGGTCATGAAGGAAGTTGAAGTGGACATTTTGAACTGGATTACGATTCAATCAAAATCATAAATATATCCTTTAGGTTTTTTTTAGTTTGTGGTTCTATTCTTAAAAAAAATATATATTTGAAAATTTGATTTTCTTATATTTTTTTACCAAGAAATTAAACTTTTCATTGATGAAATGAAAAGAGACCAATGCATAAAAGATATGAACTCCACAGGTGAGTGAAATTGAAAACAGTAAACGAAAGAAATAAATAAAGAGAATCACAATGGAAAGATAAAGACATTCCGGCTAAGACATAAAACTTGTAAACAGAAATCAACAAAAGACTTGAGAAAGAGAACATGAAAAGCATGACCTTTAGGGACAAAATACTTATCGGGCATCAAATAAACATTTGTGTCTTTCATTTTTTTTTTCCCTCTATAATTTTTGCCCATGTGACAAAACTGATAGTGAACAGTCTTTTATTACAGGTCTTAGTTGACATGATCCGAGTACCTGATTGGGCTTTTGAAGCCGCAGGACAAGAAACAAGAGTAATGGGCCAAGATGCTGCTGCATATCATCCTGGACTTTATTTGACTCCTGCTCAGGTAAGTCTATTAGCCCTGAGTTGACATTTTGTCATCAATATTCGTGAGGTTTTCCCAACACCTGTTGATCTGGTAGCATAAGAGTAGTTTTGTGCTGTTGCTACCATTTTCCCTCTTAGTGACTGTAGCTCGTTAAAAAATTCGAGGGAAGTTGATTGACATGAAATGAGAGCATTGTGTATTCGGAAGTTCTTCCGAAAGAGGGCTTGGTTTCTTAGGTTCTCAGCCTTTAAATTTTTCATGAGAGGTCTTGTCTAATTCTTTAAGAAATCTGTCTACTATGTAAACCATTATGGGGGTCCGTATTTATGACCAAATTTTTTGTTTTTAATTCTGATGGTCAAGCTATTCGTTGATGCTTGGACAGAGGGAAGCTGTGGAAGCACTTATTGAGGAACTTCCCAAATTCAGGTTAAAGGCTGTTCCAACAGATTGCAGTGAATGTCCTATCTGCTTAGAAGAGTTCCATGTAGGGAACGAGGTAATTGGTTTTTCTCGTCTTACCATTTCATTTATAGAAGTTCGGAAAACTAGTGGGTGTACAAGAATGTCGCTTGTTTATGATTTGTATTTTACTGCATTTCATGCTCTTTCTGGGAACCTAGATTCATGGTTATAATAAATACATGAAAGCACGAACCTTTTGTTGGTAAATTACTGAAAATGAAGTTACGGTCATTATAAATTGGTGCAGGTTCGTGGCCTCCCTTGTGCTCATAATTTCCATGTAGGATGCATTGACGAGTGGCTTCGACTAAATGTGAAATGCCCTAGATGTCGCTGCTCGGTCTTCCCAAACCTTGATCTTAGTGCTCTGTCCAATCTTCAGTCTGATACTGAAAGGCCATCTGCAAGTGTTGTTACGGCCAACCGTTATATGAGTCCTCAACCTTCCAGCCAAAGTTATCTGGTGAGATTGCAGGGTCTGCTTCGGCCTGTTCGCACAGAAAACACTGTTGCACACGGTGATTTAGAGTCTGCTAGTGCTTTGGAAGTTGCTGAGGATGCTGAGAATGGATCTTCCCATGACCAAACTATACCGGAAAGGTCTCCCGTAAGACCCATGTCTTTGAGTCAGTCCACGTCACAACGCTAGGTAGTTGGGGGTGTTTTTCTCCCTTTCTATTTTGACCGCTTCTAACTGCTCCTGTAAAAGCTAAACGATTGGTGTCCACATCTCACCACTTGCAAATCCCGGCAACTGTGTAATAGTAAAGCTCGAACGTTTGATTTTTTGTTTCCAAGGAATCTACTTACATTCTCACAAAACTTATTTTTTTCTTCTGTTCATCTTTACCTGTATCTTGTTCATCATAATTAATTTTAGATCTCAGTGCTTGACTATTCAGCCGCCTGGGAAGGGAGACTGGGCATGTGCTTCAAAGCAGATCTTGCAATTCCACTGGAGAATCTTCTAGGTTTACAGGTATGTTTTAACTGTTCCAAGTGTTGATGGTTGTTTCTCAATTCAATTCTCTGGTTGACGGACGATTTCCCACTAACTTGAAGAGAGCAAAGCGGGCGGTAGTATTAAAAAATGAGTTGATAGTTTACATAGTTTAGTGTTAATTTGCCTTTGCTTGCTTGTTTCTTCAGGTCAGGTCATATTTTATCTGAAAATGTCCGCACTCCATTCCCCACCAGCAGTCTAGCAGTGACCAAGTGGAGCAGCCTCAACGAATAAATGTGGTGACTGACATCCTTCCATTTTTATTTTTTTTCATTCTGCTATTTGAATTGAATCTTTCCCGTTTCAACTTTAGATTACATTCCATTTACCCTTTTTATTAAAAATTAAATAATAATATCT

mRNA sequence

CATCCGTCTCTCACCGCTTTGCTCTACTGCTCATATTGCTCATTTCTCTTCTTCTGCCTCCAAAATTTCGCTCCTGTTGTTCTATCCATGATCCTACGAGAACCAGCTCTTGTTCTCGTGATTATTTCCGATTCATTGCCATCAGATTCGATCAGGCTTCTGCACCGTCGTATGGCGGTTTGTGATTCTCCATCCAGCTTGTTCTAGTGAAAATTTCTCTCATCTATGGCTGCTCGAGGGGTCGATTTCAAGTGGTACGACGGTTTTTTCTTGTCGATGCTCGCGATTAGTGTGTATCCTTCAGTGTTTTGGGGAATTTTAGACTTGAGTGGATTTGCTCTTTATATTTCTTTGGTATTAGAGTTTGAAACGAGACATACTCATATCCTATGCTTTAAAATCAAGAGCAATGTCTTTCTCTTAACGTTTTTTATTTGTGTATTTTCTTTAACTATTTTGCTCGATAGAGTAGTTGTTTCGATCAACTGGAAGAGGTACCATCCTTGTGTACATCCCTTGCATATATGGATTTTGGTTGATTATACTACCGTCTTTGTTTTCCGTCTGCTGATGTTTGTAGATAATGGACTTGCTGCTGGAATGGGTTTGGACTTTGGGTGGCAGCAGAGGTATGCTCGATTTTGTGGAAGAATTGTGGTCCTTTCAATCCTTGCACTTCTGCTATATCCATTTCTTTGGGCTTGGACTGCCATCGGTACTTTATGGTTCAGAGAAGCCCATAAATGTCTTTTTGAGCAAGGCCAGAAATGGGGATTCCTTATTTGGCTTCTTTTTAGCTACTGTGCACTCGTATGCATTGCTTGCGTGTCATTGGGAAAGTGGTTAACTCGTAGACAAGCACTCTTGTTTCGGGCGCAACAAGGGATCCCTGTATCAGAATACGGGGTCTTAGTTGACATGATCCGAGTACCTGATTGGGCTTTTGAAGCCGCAGGACAAGAAACAAGAGTAATGGGCCAAGATGCTGCTGCATATCATCCTGGACTTTATTTGACTCCTGCTCAGAGGGAAGCTGTGGAAGCACTTATTGAGGAACTTCCCAAATTCAGGTTAAAGGCTGTTCCAACAGATTGCAGTGAATGTCCTATCTGCTTAGAAGAGTTCCATGTAGGGAACGAGGTTCGTGGCCTCCCTTGTGCTCATAATTTCCATGTAGGATGCATTGACGAGTGGCTTCGACTAAATGTGAAATGCCCTAGATGTCGCTGCTCGGTCTTCCCAAACCTTGATCTTAGTGCTCTGTCCAATCTTCAGTCTGATACTGAAAGGCCATCTGCAAGTGTTGTTACGGCCAACCGTTATATGAGTCCTCAACCTTCCAGCCAAAGTTATCTGGTGAGATTGCAGGGTCTGCTTCGGCCTGTTCGCACAGAAAACACTGTTGCACACGGTGATTTAGAGTCTGCTAGTGCTTTGGAAGTTGCTGAGGATGCTGAGAATGGATCTTCCCATGACCAAACTATACCGGAAAGGTCTCCCATCTCAGTGCTTGACTATTCAGCCGCCTGGGAAGGGAGACTGGGCATGTGCTTCAAAGCAGATCTTGCAATTCCACTGGAGAATCTTCTAGGTTTACAGGTCAGGTCATATTTTATCTGAAAATGTCCGCACTCCATTCCCCACCAGCAGTCTAGCAGTGACCAAGTGGAGCAGCCTCAACGAATAAATGTGGTGACTGACATCCTTCCATTTTTATTTTTTTTCATTCTGCTATTTGAATTGAATCTTTCCCGTTTCAACTTTAGATTACATTCCATTTACCCTTTTTATTAAAAATTAAATAATAATATCT

Coding sequence (CDS)

ATGGCTGCTCGAGGGGTCGATTTCAAGTGGTACGACGGTTTTTTCTTGTCGATGCTCGCGATTAGTGTGTATCCTTCAGTGTTTTGGGGAATTTTAGACTTGAGTGGATTTGCTCTTTATATTTCTTTGGTATTAGAGTTTGAAACGAGACATACTCATATCCTATGCTTTAAAATCAAGAGCAATGTCTTTCTCTTAACGTTTTTTATTTGTGTATTTTCTTTAACTATTTTGCTCGATAGAGTAGTTGTTTCGATCAACTGGAAGAGGTACCATCCTTGTGTACATCCCTTGCATATATGGATTTTGGTTGATTATACTACCGTCTTTGTTTTCCGTCTGCTGATGTTTGTAGATAATGGACTTGCTGCTGGAATGGGTTTGGACTTTGGGTGGCAGCAGAGGTATGCTCGATTTTGTGGAAGAATTGTGGTCCTTTCAATCCTTGCACTTCTGCTATATCCATTTCTTTGGGCTTGGACTGCCATCGGTACTTTATGGTTCAGAGAAGCCCATAAATGTCTTTTTGAGCAAGGCCAGAAATGGGGATTCCTTATTTGGCTTCTTTTTAGCTACTGTGCACTCGTATGCATTGCTTGCGTGTCATTGGGAAAGTGGTTAACTCGTAGACAAGCACTCTTGTTTCGGGCGCAACAAGGGATCCCTGTATCAGAATACGGGGTCTTAGTTGACATGATCCGAGTACCTGATTGGGCTTTTGAAGCCGCAGGACAAGAAACAAGAGTAATGGGCCAAGATGCTGCTGCATATCATCCTGGACTTTATTTGACTCCTGCTCAGAGGGAAGCTGTGGAAGCACTTATTGAGGAACTTCCCAAATTCAGGTTAAAGGCTGTTCCAACAGATTGCAGTGAATGTCCTATCTGCTTAGAAGAGTTCCATGTAGGGAACGAGGTTCGTGGCCTCCCTTGTGCTCATAATTTCCATGTAGGATGCATTGACGAGTGGCTTCGACTAAATGTGAAATGCCCTAGATGTCGCTGCTCGGTCTTCCCAAACCTTGATCTTAGTGCTCTGTCCAATCTTCAGTCTGATACTGAAAGGCCATCTGCAAGTGTTGTTACGGCCAACCGTTATATGAGTCCTCAACCTTCCAGCCAAAGTTATCTGGTGAGATTGCAGGGTCTGCTTCGGCCTGTTCGCACAGAAAACACTGTTGCACACGGTGATTTAGAGTCTGCTAGTGCTTTGGAAGTTGCTGAGGATGCTGAGAATGGATCTTCCCATGACCAAACTATACCGGAAAGGTCTCCCATCTCAGTGCTTGACTATTCAGCCGCCTGGGAAGGGAGACTGGGCATGTGCTTCAAAGCAGATCTTGCAATTCCACTGGAGAATCTTCTAGGTTTACAGGTCAGGTCATATTTTATCTGA

Protein sequence

MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIKSNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDNGLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQKWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASVVTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTIPERSPISVLDYSAAWEGRLGMCFKADLAIPLENLLGLQVRSYFI

Homology

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BLAST of Carg10353 vs. NCBI nr
Match: KAG7023134.1 (E3 ubiquitin-protein ligase SIS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 951.0 bits (2457), Expect = 3.7e-273
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK
Sbjct: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
           SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN
Sbjct: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI
Sbjct: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420

Query: 421 PERSPISVLDYSAAWEGRLGMCFKADLAIPLENLLGLQVRSYFI 465
           PERSPISVLDYSAAWEGRLGMCFKADLAIPLENLLGLQVRSYFI
Sbjct: 421 PERSPISVLDYSAAWEGRLGMCFKADLAIPLENLLGLQVRSYFI 464

[Close]

BLAST of Carg10353 vs. NCBI nr
Match: XP_023516682.1 (E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 725.7 bits (1872), Expect = 2.5e-205
Identity = 363/438 (82.88%), Postives = 367/438 (83.79%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLAISV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLAISV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                VVVSINWKRYH CVHPLHIWILVDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VVVSINWKRYHTCVHPLHIWILVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL SDTERPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLHSDTERPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRYM PQPSSQSYLVRLQGLLRPVRTENTVAHGDLESA ALE AE+AENGSSHDQTI
Sbjct: 361 VTANRYMRPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESAGALEAAENAENGSSHDQTI 380

Query: 421 PERSPISVLDYSAAWEGR 439
           PERSP+  +  S +   R
Sbjct: 421 PERSPVRPMSLSQSTSQR 380

[Close]

BLAST of Carg10353 vs. NCBI nr
Match: XP_022921995.1 (E3 ubiquitin-protein ligase SIS3-like [Cucurbita moschata])

HSP 1 Score: 724.9 bits (1870), Expect = 4.3e-205
Identity = 364/438 (83.11%), Postives = 368/438 (84.02%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLAISV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLAISV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                VVVSINWKRYH CVHPLHIWILVDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VVVSINWKRYHTCVHPLHIWILVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL SDTERPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLHSDTERPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRYM PQPSSQSYLVRLQGLLRPVRTENTVAH DLESASALEVAE+AENGSSHDQTI
Sbjct: 361 VTANRYMRPQPSSQSYLVRLQGLLRPVRTENTVAHCDLESASALEVAENAENGSSHDQTI 380

Query: 421 PERSPISVLDYSAAWEGR 439
           PERSP+  +  S +   R
Sbjct: 421 PERSPVRPMPLSQSTSQR 380

[Close]

BLAST of Carg10353 vs. NCBI nr
Match: KAG6589451.1 (E3 ubiquitin-protein ligase SIS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 724.2 bits (1868), Expect = 7.3e-205
Identity = 362/422 (85.78%), Postives = 363/422 (86.02%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLAISV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLAISV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                VVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL SDTERPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLHSDTERPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAE+AENGSSHDQTI
Sbjct: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAENAENGSSHDQTI 364

Query: 421 PE 423
           PE
Sbjct: 421 PE 364

[Close]

BLAST of Carg10353 vs. NCBI nr
Match: XP_022988385.1 (E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 721.5 bits (1861), Expect = 4.7e-204
Identity = 359/426 (84.27%), Postives = 363/426 (85.21%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLAISV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLAISV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                VVVSINWKRYH CVHPLHIWILVDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VVVSINWKRYHTCVHPLHIWILVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIAC+SLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACMSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDC ECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCCECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL SDTERPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLHSDTERPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRYM PQPSSQSYLVRLQGLLRPV TENTVAHGDLESASALEVAE+AENGSSHDQT+
Sbjct: 361 VTANRYMRPQPSSQSYLVRLQGLLRPVHTENTVAHGDLESASALEVAENAENGSSHDQTV 368

Query: 421 PERSPI 427
           PERSP+
Sbjct: 421 PERSPV 368

[Close]

BLAST of Carg10353 vs. ExPASy Swiss-Prot
Match: Q8GYT9 (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2)

HSP 1 Score: 509.6 bits (1311), Expect = 3.7e-143
Identity = 253/412 (61.41%), Postives = 291/412 (70.63%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MA RGVDFKWYDGFFLSMLA SV                                     
Sbjct: 1   MAMRGVDFKWYDGFFLSMLATSV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                ++V++NW RY  C +PLHIWI+VDYTTVF+FR+ MFVDN
Sbjct: 61  ---------------------IIVAVNWNRYRACEYPLHIWIVVDYTTVFIFRVFMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLA+G+GLDFG QQR A FCGR+VVLS+L+LLLYPFLWAWT IGT WF ++  CL E+GQ
Sbjct: 121 GLASGLGLDFGSQQRNAMFCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTKSKTCLPEEGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWL+FSYC L+CIA + +GKWLTRRQ  L RAQQGIP+SE+G+LVDMIRVPDWAF
Sbjct: 181 KWGFLIWLMFSYCGLLCIAFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQE R + QDAA YHPGLYLTPAQ EAVEALI+ELPKFRLKAVP DC EC ICLEEF
Sbjct: 241 EAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           H+G+EVRGLPCAHNFHV CID+WLRLNVKCPRCRCSVFP+LDLSALSNLQS      + V
Sbjct: 301 HIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHSQV 343

Query: 361 VTAN---RYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAED 410
            T     RY+  QP S+SY +R+Q L+ PV T+           +ALE AE+
Sbjct: 361 NTETSEARYIRSQPQSESYFLRVQSLIHPVHTD-----------TALETAEN 343

[Close]

BLAST of Carg10353 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.6e-11
Identity = 36/107 (33.64%), Postives = 53/107 (49.53%), Query Frame = 0


Query: 261 LYLTPAQREAVEALIEELPKFRL-------------KAVPTDC--------------SEC 320
           LY    Q  A +  I+++PKFR              + + T+C              +EC
Sbjct: 279 LYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAEC 338

Query: 321 PICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPN 341
            ICL E+  G E+R LPC H+FH  CID+WL +N +CP C+ ++  N
Sbjct: 339 CICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILKN 385

[Close]

BLAST of Carg10353 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-10
Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 0


Query: 156 FLWAWTAIGTLWFREAHKCLFEQGQK--W------GFLIWLLFSYCALVCIACVSLGKWL 215
           F + W  IG  W     + L ++  +  W      GF ++ +    AL C+  +++   L
Sbjct: 223 FSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCL 282

Query: 216 TRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETRVMGQDAAAYHPGLYLTPAQ 275
               A+L+     +   E     D+ ++  + F   G   +    +A     G+      
Sbjct: 283 PCIIAVLY----AVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGT 342

Query: 276 REAVEALIEELPKFRLKAVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLN 335
              +E  + +           + +EC ICL  +  G E+R LPC H+FH  C+D+WL +N
Sbjct: 343 DSPIEHTLLQ-----------EDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYIN 402

Query: 336 VKCPRCRCSVFPNLDL 344
             CP C+ ++  + +L
Sbjct: 403 ATCPLCKYNILKSSNL 403

[Close]

BLAST of Carg10353 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-10
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 285 AVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSV 338
           A+P + +EC ICL  +    E+R LPC H+FH GC+D+WL +N  CP C+ ++
Sbjct: 317 ALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369

[Close]

BLAST of Carg10353 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-10
Identity = 31/73 (42.47%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 273 ALIEELPKFRLKAVPT-----DCSECPICLEEFHVGNEVRGLP-CAHNFHVGCIDEWLRL 332
           ++IE  P F    V T     +  ECP+CL EF     +R +P C H FH GCID WLR 
Sbjct: 93  SVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRS 152

Query: 333 NVKCPRCRCSVFP 340
              CP CR ++ P
Sbjct: 153 QTTCPLCRANLVP 165

[Close]

BLAST of Carg10353 vs. ExPASy TrEMBL
Match: A0A6J1E7C4 (E3 ubiquitin-protein ligase SIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111430080 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 2.1e-205
Identity = 364/438 (83.11%), Postives = 368/438 (84.02%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLAISV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLAISV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                VVVSINWKRYH CVHPLHIWILVDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VVVSINWKRYHTCVHPLHIWILVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL SDTERPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLHSDTERPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRYM PQPSSQSYLVRLQGLLRPVRTENTVAH DLESASALEVAE+AENGSSHDQTI
Sbjct: 361 VTANRYMRPQPSSQSYLVRLQGLLRPVRTENTVAHCDLESASALEVAENAENGSSHDQTI 380

Query: 421 PERSPISVLDYSAAWEGR 439
           PERSP+  +  S +   R
Sbjct: 421 PERSPVRPMPLSQSTSQR 380

[Close]

BLAST of Carg10353 vs. ExPASy TrEMBL
Match: A0A6J1JJE6 (E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485643 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 2.3e-204
Identity = 359/426 (84.27%), Postives = 363/426 (85.21%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLAISV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLAISV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                VVVSINWKRYH CVHPLHIWILVDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VVVSINWKRYHTCVHPLHIWILVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIAC+SLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACMSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDC ECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCCECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL SDTERPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLHSDTERPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRYM PQPSSQSYLVRLQGLLRPV TENTVAHGDLESASALEVAE+AENGSSHDQT+
Sbjct: 361 VTANRYMRPQPSSQSYLVRLQGLLRPVHTENTVAHGDLESASALEVAENAENGSSHDQTV 368

Query: 421 PERSPI 427
           PERSP+
Sbjct: 421 PERSPV 368

[Close]

BLAST of Carg10353 vs. ExPASy TrEMBL
Match: A0A1S3BVE9 (E3 ubiquitin-protein ligase SIS3-like OS=Cucumis melo OX=3656 GN=LOC103493914 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.6e-194
Identity = 344/429 (80.19%), Postives = 355/429 (82.75%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLA SV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLATSV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                V+VSINWK+YH CVHPLHIWI+VDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VIVSINWKKYHTCVHPLHIWIVVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLS+LALLLYPFLWAWTAIGTLWFREAHKCL EQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSVLALLLYPFLWAWTAIGTLWFREAHKCLPEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIAC+SLGKWLTRRQALLFRAQQG PVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACMSLGKWLTRRQALLFRAQQGFPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELP+FRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPEFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL+SDT+RPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRSDTDRPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           VTANRY+  QPSSQSYLVRLQGLLRPVRTEN  AHGDL  ASALE    AENGS+HDQTI
Sbjct: 361 VTANRYVGSQPSSQSYLVRLQGLLRPVRTENNDAHGDLGPASALEA---AENGSAHDQTI 368

Query: 421 PERSPISVL 430
           PERSP+  L
Sbjct: 421 PERSPVRPL 368

[Close]

BLAST of Carg10353 vs. ExPASy TrEMBL
Match: A0A0A0LS35 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004990 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.8e-193
Identity = 340/426 (79.81%), Postives = 354/426 (83.10%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLA SV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLATSV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                V+VSINWKRYH CVHPLHIWI+VDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VIVSINWKRYHTCVHPLHIWIVVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRIVVLS+LA+LLYPFLWAWTAIGT+WFREAHKCL EQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSVLAVLLYPFLWAWTAIGTIWFREAHKCLPEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCALVCIAC+SLGKWLTRRQALLFRAQQGIPVSEYGVLVDM+RVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALVCIACMSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMVRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNL+SDT+RPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRSDTDRPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           +TANRY+  QPSSQSYLVRLQGLLRPVRTE   AHGDL  ASALE    AENGS+H+QTI
Sbjct: 361 LTANRYVGSQPSSQSYLVRLQGLLRPVRTEENDAHGDLGPASALEA---AENGSAHEQTI 365

Query: 421 PERSPI 427
           PERSP+
Sbjct: 421 PERSPV 365

[Close]

BLAST of Carg10353 vs. ExPASy TrEMBL
Match: A0A6J1C0F0 (E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007145 PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 3.0e-188
Identity = 333/424 (78.54%), Postives = 347/424 (81.84%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MAARGVDFKWYDGFFLSMLA SV                                     
Sbjct: 1   MAARGVDFKWYDGFFLSMLATSV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                V+VSI+WKRYH CVHPLHIWI+VDYTTVFVFRLLMFVDN
Sbjct: 61  ---------------------VIVSISWKRYHTCVHPLHIWIVVDYTTVFVFRLLMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLAAGMGLDFGWQQRYARFCGRI VLS+LALLLYPFLWAWT IGTLWF EA+KCL EQGQ
Sbjct: 121 GLAAGMGLDFGWQQRYARFCGRIAVLSVLALLLYPFLWAWTGIGTLWFIEANKCLLEQGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWLLFSYCAL+CIAC+ LGKWLTRRQALL RAQQGIPVSEYGVLVDMIRVPDWAF
Sbjct: 181 KWGFLIWLLFSYCALICIACMFLGKWLTRRQALLLRAQQGIPVSEYGVLVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQETRVMGQDAAAYHPGLYLT AQREAVEALIEELPKFRLKAVPTDCSECPICLEEF
Sbjct: 241 EAAGQETRVMGQDAAAYHPGLYLTAAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSN+++DT+RPSASV
Sbjct: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNIRTDTDRPSASV 360

Query: 361 VTANRYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAEDAENGSSHDQTI 420
           +TANRYM  QPSSQSYLVRLQGLLRPVRTENT AH DLE+ SAL   E AENGS+HDQTI
Sbjct: 361 ITANRYMRSQPSSQSYLVRLQGLLRPVRTENTSAHSDLETGSAL---EGAENGSAHDQTI 363

Query: 421 PERS 425
            ERS
Sbjct: 421 SERS 363

[Close]

BLAST of Carg10353 vs. TAIR 10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3 )

HSP 1 Score: 509.6 bits (1311), Expect = 2.6e-144
Identity = 253/412 (61.41%), Postives = 291/412 (70.63%), Query Frame = 0


Query: 1   MAARGVDFKWYDGFFLSMLAISVYPSVFWGILDLSGFALYISLVLEFETRHTHILCFKIK 60
           MA RGVDFKWYDGFFLSMLA SV                                     
Sbjct: 1   MAMRGVDFKWYDGFFLSMLATSV------------------------------------- 60

Query: 61  SNVFLLTFFICVFSLTILLDRVVVSINWKRYHPCVHPLHIWILVDYTTVFVFRLLMFVDN 120
                                ++V++NW RY  C +PLHIWI+VDYTTVF+FR+ MFVDN
Sbjct: 61  ---------------------IIVAVNWNRYRACEYPLHIWIVVDYTTVFIFRVFMFVDN 120

Query: 121 GLAAGMGLDFGWQQRYARFCGRIVVLSILALLLYPFLWAWTAIGTLWFREAHKCLFEQGQ 180
           GLA+G+GLDFG QQR A FCGR+VVLS+L+LLLYPFLWAWT IGT WF ++  CL E+GQ
Sbjct: 121 GLASGLGLDFGSQQRNAMFCGRVVVLSVLSLLLYPFLWAWTVIGTQWFTKSKTCLPEEGQ 180

Query: 181 KWGFLIWLLFSYCALVCIACVSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAF 240
           KWGFLIWL+FSYC L+CIA + +GKWLTRRQ  L RAQQGIP+SE+G+LVDMIRVPDWAF
Sbjct: 181 KWGFLIWLMFSYCGLLCIAFICVGKWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDWAF 240

Query: 241 EAAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEF 300
           EAAGQE R + QDAA YHPGLYLTPAQ EAVEALI+ELPKFRLKAVP DC EC ICLEEF
Sbjct: 241 EAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLEEF 300

Query: 301 HVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLQSDTERPSASV 360
           H+G+EVRGLPCAHNFHV CID+WLRLNVKCPRCRCSVFP+LDLSALSNLQS      + V
Sbjct: 301 HIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHSQV 343

Query: 361 VTAN---RYMSPQPSSQSYLVRLQGLLRPVRTENTVAHGDLESASALEVAED 410
            T     RY+  QP S+SY +R+Q L+ PV T+           +ALE AE+
Sbjct: 361 NTETSEARYIRSQPQSESYFLRVQSLIHPVHTD-----------TALETAEN 343

[Close]

BLAST of Carg10353 vs. TAIR 10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-12
Identity = 36/107 (33.64%), Postives = 53/107 (49.53%), Query Frame = 0


Query: 261 LYLTPAQREAVEALIEELPKFRL-------------KAVPTDC--------------SEC 320
           LY    Q  A +  I+++PKFR              + + T+C              +EC
Sbjct: 279 LYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAEC 338

Query: 321 PICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPN 341
            ICL E+  G E+R LPC H+FH  CID+WL +N +CP C+ ++  N
Sbjct: 339 CICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILKN 385

[Close]

BLAST of Carg10353 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 5.3e-12
Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 265 PAQREAVEALIEELPKFRL--KAVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVGCIDE 324
           P    A E  I  LP  ++  + +  D S+C +C+EEF VG +   LPC H +H  CI  
Sbjct: 194 PGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVP 253

Query: 325 WLRLNVKCPRCR 335
           WLRLN  CP CR
Sbjct: 254 WLRLNNSCPICR 265

[Close]

BLAST of Carg10353 vs. TAIR 10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-11
Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 0


Query: 156 FLWAWTAIGTLWFREAHKCLFEQGQK--W------GFLIWLLFSYCALVCIACVSLGKWL 215
           F + W  IG  W     + L ++  +  W      GF ++ +    AL C+  +++   L
Sbjct: 223 FSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCL 282

Query: 216 TRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETRVMGQDAAAYHPGLYLTPAQ 275
               A+L+     +   E     D+ ++  + F   G   +    +A     G+      
Sbjct: 283 PCIIAVLY----AVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGT 342

Query: 276 REAVEALIEELPKFRLKAVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLN 335
              +E  + +           + +EC ICL  +  G E+R LPC H+FH  C+D+WL +N
Sbjct: 343 DSPIEHTLLQ-----------EDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYIN 402

Query: 336 VKCPRCRCSVFPNLDL 344
             CP C+ ++  + +L
Sbjct: 403 ATCPLCKYNILKSSNL 403

[Close]

BLAST of Carg10353 vs. TAIR 10
Match: AT1G12760.2 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-11
Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 0


Query: 156 FLWAWTAIGTLWFREAHKCLFEQGQK--W------GFLIWLLFSYCALVCIACVSLGKWL 215
           F + W  IG  W     + L ++  +  W      GF ++ +    AL C+  +++   L
Sbjct: 152 FSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCL 211

Query: 216 TRRQALLFRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETRVMGQDAAAYHPGLYLTPAQ 275
               A+L+     +   E     D+ ++  + F   G   +    +A     G+      
Sbjct: 212 PCIIAVLY----AVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGT 271

Query: 276 REAVEALIEELPKFRLKAVPTDCSECPICLEEFHVGNEVRGLPCAHNFHVGCIDEWLRLN 335
              +E  + +           + +EC ICL  +  G E+R LPC H+FH  C+D+WL +N
Sbjct: 272 DSPIEHTLLQ-----------EDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYIN 331

Query: 336 VKCPRCRCSVFPNLDL 344
             CP C+ ++  + +L
Sbjct: 332 ATCPLCKYNILKSSNL 332

The following BLAST results are available for this feature:

BLAST of Carg10353 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023134.1	3.7e-273	100.00	E3 ubiquitin-protein ligase SIS3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516682.1	2.5e-205	82.88	E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921995.1	4.3e-205	83.11	E3 ubiquitin-protein ligase SIS3-like [Cucurbita moschata]	[more]
KAG6589451.1	7.3e-205	85.78	E3 ubiquitin-protein ligase SIS3, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022988385.1	4.7e-204	84.27	E3 ubiquitin-protein ligase SIS3-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg10353 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYT9	3.7e-143	61.41	E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV...	[more]
Q93Z92	2.6e-11	33.64	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q9LN71	1.7e-10	22.96	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q8LDB8	2.2e-10	45.28	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]
Q9SK92	2.9e-10	42.47	E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ...	[more]

BLAST of Carg10353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7C4	2.1e-205	83.11	E3 ubiquitin-protein ligase SIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]
A0A6J1JJE6	2.3e-204	84.27	E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3BVE9	1.6e-194	80.19	E3 ubiquitin-protein ligase SIS3-like OS=Cucumis melo OX=3656 GN=LOC103493914 PE...	[more]
A0A0A0LS35	1.8e-193	79.81	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004990 P...	[more]
A0A6J1C0F0	3.0e-188	78.54	E3 ubiquitin-protein ligase SIS3-like isoform X1 OS=Momordica charantia OX=3673 ...	[more]

BLAST of Carg10353 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47990.1	2.6e-144	61.41	SUGAR-INSENSITIVE 3	[more]
AT4G11680.1	1.8e-12	33.64	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G60360.1	5.3e-12	43.06	RING/U-box superfamily protein	[more]
AT1G12760.1	1.2e-11	22.96	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G12760.2	1.2e-11	22.96	Zinc finger, C3HC4 type (RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 293..333 e-value: 5.4E-7 score: 39.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 292..334 e-value: 4.3E-13 score: 49.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 293..334 score: 12.622055
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 262..339 e-value: 5.4E-19 score: 69.7
None	No IPR available	PANTHER	PTHR47179:SF1	E3 UBIQUITIN-PROTEIN LIGASE SIS3	coord: 1..410
None	No IPR available	CDD	cd16474	RING-H2_RNF111_like	coord: 292..336 e-value: 1.56678E-18 score: 76.9665
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 275..342
IPR044793	E3 ubiquitin-protein ligase SIS3	PANTHER	PTHR47179	E3 UBIQUITIN-PROTEIN LIGASE SIS3	coord: 1..410

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10353-RA	Carg10353-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010182	sugar mediated signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity