Carg25931 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25931
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr04: 10932533 .. 10934317 (+)
RNA-Seq Expression	Carg25931
Synteny	Carg25931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTTTGGATTCGATATGCTGCGAGACGAATCTATTTCTCCAAAGTGTATTTGCTATTGTCGTAAAAGGTCATTGGAAGCACCTCTTGAAGCCCAAGATAAGTTCTAGCCTGACATCGATATCCATCCACCAGATTCTCCTCCAGCTATCGTTTTATTGTTCAGGTCCTTCACTTTCTTGGGCGTTTTTCAAGTGGGTTGAGTTGATTCCTGATTACAAACACTCTTTACAATCCTCATGGACCATGATATGCATTCTCACAGAGCACAAACATTTCAGAACTGCACAAAATTTGGTTGAAAAGATTGCACATAAGGATTTCATATCCTCCCCATCGGTTTTAAATGCTTTGGCAACCACCTATGATAATTCTGATGTCAATGCACATATTTTGAGCTGGTTAATGATAATATATGTAAATTGCAAGATGTCCCAGGATGCTATTCAGGTTCTAGAATATATGAGGCTTCATGGATTTAAGCCTCATTTGCATGCTTGTACTGTGCTTTTAAATTCCTTGGCAAAGGATAGGTTAACCGACTTGGTATGGAAGATTTATAAGAAAATGGTTCGAATTGGAGTTGTTCCTAACATTCATATATACAATGTGCTAATTCATGCTTGCTGCAAGTCTGGGGACGTTGAAAAGGCTGAACAACTATTGAGTGAAATGGAATTGAGGTTTGTTTCCCCTGATCTTTACACATACAACACGTTGATATCTTTGTATTGTAAAAAGAGTCTGCATTATGAAGCTTTGTGTGTTCAAGATAGAATGGAAAGGGGAGGAGTGAGCCCTGACATTATAACATATAATTCCCTTATATATGGGTTTTGTAAAGAGGGTAGGATGAGAGAGGCTGTAAAGCTTTTTCGTGAAATTAAGGATGTTTCTCCCAACCATGTTACATACACCACGTTAATTGATGGATATTGTAGAGTGAATGACCTTGAAGAAGCACTAAGATTATGTAAGGTGATGGAAGCTAAGGGTTTGCAACTTGGGGTTGTGACTTATAATTCAATTCTCCGTAAGTTATGCGAGGAAGGCAGGATAAGGGATGCAAATAAACTCTTGAATGAGATGGGTGAGAGGAAAGTTGAACCGGACAATGTCACTTGTAACACATTAGTTAATGCTTACTGCAAAATAGGAGATATGAAATCTGCATTGAAGGTGAAGAGCAAAATGTTGGATGCTGGACTGCAGCTCGACAGCTTCACGTACAAGGCGCTGATTCACGGATTTTATCGAGTAAGAGATATGGAAAGTGCCAAAGAGCTCTTATTTGTCATGCTTGATGCAGGATTATGTCCCGGTTATTGTACATATTCATGGCTAGTTGATGCTTATTGTAAACTAGGAAATGAAGGAGCTATCATAAGTCTACTTGATGAGTTTTTGACAAGAGGTCATTGTGTTGATTTATCAGTTTATAGGGCACTAATAAGAAGGTTGTGTCACAGAGAAAGGGTTGGTTTTGCTGAACAAATATACAGCACCATGCAACAGAAAGGTATATCAGGAGACAGTGTGATATATACAAGCCTGGCATATGCTTACTGGAAAGAGGGGAAGTCGAATCATGCTTCAGAGATGCTGCATGAAATGGCTAAAAGAAGACTAATGGTAACCCTCAAGATTTATAGATGTTTCAATGCTTCTTATGGATGCGACAACCGAATCTTGAATCTATTTTGGGATCATGTTTCAGAGGGAGGCTTACTGTCTAAGAGCATCACCAAGGAAATACAAAAAACGAACTTGCAAACTGGTTGA

mRNA sequence

ATGGCTGGTTTGGATTCGATATGCTGCGAGACGAATCTATTTCTCCAAAGTGTATTTGCTATTGTCGTAAAAGGTCATTGGAAGCACCTCTTGAAGCCCAAGATAAGTTCTAGCCTGACATCGATATCCATCCACCAGATTCTCCTCCAGCTATCGTTTTATTGTTCAGGTCCTTCACTTTCTTGGGCGTTTTTCAAGTGGGTTGAGTTGATTCCTGATTACAAACACTCTTTACAATCCTCATGGACCATGATATGCATTCTCACAGAGCACAAACATTTCAGAACTGCACAAAATTTGGTTGAAAAGATTGCACATAAGGATTTCATATCCTCCCCATCGGTTTTAAATGCTTTGGCAACCACCTATGATAATTCTGATGTCAATGCACATATTTTGAGCTGGTTAATGATAATATATGTAAATTGCAAGATGTCCCAGGATGCTATTCAGGTTCTAGAATATATGAGGCTTCATGGATTTAAGCCTCATTTGCATGCTTGTACTGTGCTTTTAAATTCCTTGGCAAAGGATAGGTTAACCGACTTGGTATGGAAGATTTATAAGAAAATGGTTCGAATTGGAGTTGTTCCTAACATTCATATATACAATGTGCTAATTCATGCTTGCTGCAAGTCTGGGGACGTTGAAAAGGCTGAACAACTATTGAGTGAAATGGAATTGAGGTTTGTTTCCCCTGATCTTTACACATACAACACGTTGATATCTTTGTATTGTAAAAAGAGTCTGCATTATGAAGCTTTGTGTGTTCAAGATAGAATGGAAAGGGGAGGAGTGAGCCCTGACATTATAACATATAATTCCCTTATATATGGGTTTTGTAAAGAGGGTAGGATGAGAGAGGCTGTAAAGCTTTTTCGTGAAATTAAGGATGTTTCTCCCAACCATGTTACATACACCACGTTAATTGATGGATATTGTAGAGTGAATGACCTTGAAGAAGCACTAAGATTATGTAAGGTGATGGAAGCTAAGGGTTTGCAACTTGGGGTTGTGACTTATAATTCAATTCTCCGTAAGTTATGCGAGGAAGGCAGGATAAGGGATGCAAATAAACTCTTGAATGAGATGGGTGAGAGGAAAGTTGAACCGGACAATGTCACTTGTAACACATTAGTTAATGCTTACTGCAAAATAGGAGATATGAAATCTGCATTGAAGGTGAAGAGCAAAATGTTGGATGCTGGACTGCAGCTCGACAGCTTCACGTACAAGGCGCTGATTCACGGATTTTATCGAGTAAGAGATATGGAAAGTGCCAAAGAGCTCTTATTTGTCATGCTTGATGCAGGATTATGTCCCGGTTATTGTACATATTCATGGCTAGTTGATGCTTATTGTAAACTAGGAAATGAAGGAGCTATCATAAGTCTACTTGATGAGTTTTTGACAAGAGGTCATTGTGTTGATTTATCAGTTTATAGGGCACTAATAAGAAGGTTGTGTCACAGAGAAAGGGTTGGTTTTGCTGAACAAATATACAGCACCATGCAACAGAAAGGTATATCAGGAGACAGTGTGATATATACAAGCCTGGCATATGCTTACTGGAAAGAGGGGAAGTCGAATCATGCTTCAGAGATGCTGCATGAAATGGCTAAAAGAAGACTAATGGTAACCCTCAAGATTTATAGATGTTTCAATGCTTCTTATGGATGCGACAACCGAATCTTGAATCTATTTTGGGATCATGTTTCAGAGGGAGGCTTACTGTCTAAGAGCATCACCAAGGAAATACAAAAAACGAACTTGCAAACTGGTTGA

Coding sequence (CDS)

ATGGCTGGTTTGGATTCGATATGCTGCGAGACGAATCTATTTCTCCAAAGTGTATTTGCTATTGTCGTAAAAGGTCATTGGAAGCACCTCTTGAAGCCCAAGATAAGTTCTAGCCTGACATCGATATCCATCCACCAGATTCTCCTCCAGCTATCGTTTTATTGTTCAGGTCCTTCACTTTCTTGGGCGTTTTTCAAGTGGGTTGAGTTGATTCCTGATTACAAACACTCTTTACAATCCTCATGGACCATGATATGCATTCTCACAGAGCACAAACATTTCAGAACTGCACAAAATTTGGTTGAAAAGATTGCACATAAGGATTTCATATCCTCCCCATCGGTTTTAAATGCTTTGGCAACCACCTATGATAATTCTGATGTCAATGCACATATTTTGAGCTGGTTAATGATAATATATGTAAATTGCAAGATGTCCCAGGATGCTATTCAGGTTCTAGAATATATGAGGCTTCATGGATTTAAGCCTCATTTGCATGCTTGTACTGTGCTTTTAAATTCCTTGGCAAAGGATAGGTTAACCGACTTGGTATGGAAGATTTATAAGAAAATGGTTCGAATTGGAGTTGTTCCTAACATTCATATATACAATGTGCTAATTCATGCTTGCTGCAAGTCTGGGGACGTTGAAAAGGCTGAACAACTATTGAGTGAAATGGAATTGAGGTTTGTTTCCCCTGATCTTTACACATACAACACGTTGATATCTTTGTATTGTAAAAAGAGTCTGCATTATGAAGCTTTGTGTGTTCAAGATAGAATGGAAAGGGGAGGAGTGAGCCCTGACATTATAACATATAATTCCCTTATATATGGGTTTTGTAAAGAGGGTAGGATGAGAGAGGCTGTAAAGCTTTTTCGTGAAATTAAGGATGTTTCTCCCAACCATGTTACATACACCACGTTAATTGATGGATATTGTAGAGTGAATGACCTTGAAGAAGCACTAAGATTATGTAAGGTGATGGAAGCTAAGGGTTTGCAACTTGGGGTTGTGACTTATAATTCAATTCTCCGTAAGTTATGCGAGGAAGGCAGGATAAGGGATGCAAATAAACTCTTGAATGAGATGGGTGAGAGGAAAGTTGAACCGGACAATGTCACTTGTAACACATTAGTTAATGCTTACTGCAAAATAGGAGATATGAAATCTGCATTGAAGGTGAAGAGCAAAATGTTGGATGCTGGACTGCAGCTCGACAGCTTCACGTACAAGGCGCTGATTCACGGATTTTATCGAGTAAGAGATATGGAAAGTGCCAAAGAGCTCTTATTTGTCATGCTTGATGCAGGATTATGTCCCGGTTATTGTACATATTCATGGCTAGTTGATGCTTATTGTAAACTAGGAAATGAAGGAGCTATCATAAGTCTACTTGATGAGTTTTTGACAAGAGGTCATTGTGTTGATTTATCAGTTTATAGGGCACTAATAAGAAGGTTGTGTCACAGAGAAAGGGTTGGTTTTGCTGAACAAATATACAGCACCATGCAACAGAAAGGTATATCAGGAGACAGTGTGATATATACAAGCCTGGCATATGCTTACTGGAAAGAGGGGAAGTCGAATCATGCTTCAGAGATGCTGCATGAAATGGCTAAAAGAAGACTAATGGTAACCCTCAAGATTTATAGATGTTTCAATGCTTCTTATGGATGCGACAACCGAATCTTGAATCTATTTTGGGATCATGTTTCAGAGGGAGGCTTACTGTCTAAGAGCATCACCAAGGAAATACAAAAAACGAACTTGCAAACTGGTTGA

Protein sequence

MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSLSWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVSPNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMAKRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG

Homology

[Close]

BLAST of Carg25931 vs. NCBI nr
Match: XP_022957214.1 (pentatricopeptide repeat-containing protein At5g38730 [Cucurbita moschata] >KAG7032401.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1215.7 bits (3144), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL
Sbjct: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL
Sbjct: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT
Sbjct: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS
Sbjct: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR
Sbjct: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV
Sbjct: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
           YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA
Sbjct: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540

Query: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 595
           KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG
Sbjct: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 594

[Close]

BLAST of Carg25931 vs. NCBI nr
Match: XP_023547207.1 (pentatricopeptide repeat-containing protein At5g38730 [Cucurbita pepo subsp. pepo] >XP_023547281.1 pentatricopeptide repeat-containing protein At5g38730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1209.1 bits (3127), Expect = 0.0e+00
Identity = 592/594 (99.66%), Postives = 592/594 (99.66%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL
Sbjct: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL
Sbjct: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT
Sbjct: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS
Sbjct: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR
Sbjct: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV
Sbjct: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
           YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSN ASEMLHEMA
Sbjct: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNLASEMLHEMA 540

Query: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 595
           KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQK NLQTG
Sbjct: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKMNLQTG 594

[Close]

BLAST of Carg25931 vs. NCBI nr
Match: XP_022997664.1 (pentatricopeptide repeat-containing protein At5g38730 [Cucurbita maxima])

HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 584/594 (98.32%), Postives = 589/594 (99.16%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL
Sbjct: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHF+TAQNLVEKIAHKDFISSP VLNALA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFKTAQNLVEKIAHKDFISSPLVLNALA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL
Sbjct: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT
Sbjct: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS
Sbjct: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR
Sbjct: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMES+KELLFVMLDAGLCPGYCTYSWLVDAYC+LGNEGAIISLLDEFLTRGHCVDLSV
Sbjct: 421 VRDMESSKELLFVMLDAGLCPGYCTYSWLVDAYCELGNEGAIISLLDEFLTRGHCVDLSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
           YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSN ASEMLHEMA
Sbjct: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNLASEMLHEMA 540

Query: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 595
           KRRLMVTLKIYRCFNASYGCDN +L+LFWDH SEGGLLSKSITKEIQK NLQTG
Sbjct: 541 KRRLMVTLKIYRCFNASYGCDNHMLHLFWDHASEGGLLSKSITKEIQKMNLQTG 594

[Close]

BLAST of Carg25931 vs. NCBI nr
Match: KAG6601641.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1109.7 bits (2869), Expect = 0.0e+00
Identity = 544/545 (99.82%), Postives = 544/545 (99.82%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL
Sbjct: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL
Sbjct: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT
Sbjct: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS
Sbjct: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR
Sbjct: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV
Sbjct: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
           YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSN ASEMLHEMA
Sbjct: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNLASEMLHEMA 540

Query: 541 KRRLM 546
           KRRLM
Sbjct: 541 KRRLM 545

[Close]

BLAST of Carg25931 vs. NCBI nr
Match: XP_022157769.1 (pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia] >XP_022157770.1 pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia] >XP_022157771.1 pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia])

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 522/594 (87.88%), Postives = 557/594 (93.77%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGL S+  ETNLF+QSVFAIVVKGHWKHLLKPKISSSLTSISIHQIL +LSFYCSGPSL
Sbjct: 1   MAGLVSLSGETNLFVQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILFRLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTM+CILTEH+HF+TAQNL+E IA KDF+SSPSVLN LA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMVCILTEHRHFKTAQNLLENIARKDFMSSPSVLNCLA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TT DN DVNAHI SWLMIIYVNCKMSQDAIQVLEYMRLHG +PHLHACTVLLNSLAKDRL
Sbjct: 121 TTCDNPDVNAHIFSWLMIIYVNCKMSQDAIQVLEYMRLHGIRPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TD+VWKIYKKMV+IGV+PNIHIYNVLIHACCKSGDVEKAEQ+LSEMEL+ V PDLYTYNT
Sbjct: 181 TDMVWKIYKKMVQIGVLPNIHIYNVLIHACCKSGDVEKAEQILSEMELKSVFPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLY KKS+HYEALCVQDRMERGG+ PDI+TYN+LIYGFCKE RMREAVKLFREIKD S
Sbjct: 241 LISLYSKKSMHYEALCVQDRMERGGIRPDIVTYNALIYGFCKESRMREAVKLFREIKDAS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGL LGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLHLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEM ERKVEPDNVTCNTL+NAYCKIGDMKSALKVK+KMLDAGLQLDSFTYKALIHGF R
Sbjct: 361 LNEMAERKVEPDNVTCNTLINAYCKIGDMKSALKVKNKMLDAGLQLDSFTYKALIHGFCR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMESAKE+LF MLD GLCP YCTYSWLVD YC+ GNEGAIISLLDEFLTRG CVD+SV
Sbjct: 421 VRDMESAKEVLFSMLDVGLCPAYCTYSWLVDGYCEQGNEGAIISLLDEFLTRGTCVDVSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
            RALIRRLCH+E+VG+AE+IY +M+ +GISGDSVIYTSLAYAYWKEGKSN A  ML EM 
Sbjct: 481 CRALIRRLCHKEKVGYAEKIYHSMEHRGISGDSVIYTSLAYAYWKEGKSNLALGMLCEMT 540

Query: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 595
           KRRLMVTLKIYRCFNASYGCDNRIL+LFWDHV+E GL+S+SIT EI+K NLQTG
Sbjct: 541 KRRLMVTLKIYRCFNASYGCDNRILHLFWDHVAERGLMSRSITVEIRKMNLQTG 594

[Close]

BLAST of Carg25931 vs. ExPASy Swiss-Prot
Match: Q9FKR3 (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX=3702 GN=At5g38730 PE=2 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 4.4e-205
Identity = 345/585 (58.97%), Postives = 450/585 (76.92%), Query Frame = 0


Query: 13  LFLQSVFAIVVKGHWKHLLKPKISSSLTSISI-HQILLQLSFYC--SGPSLSWAFFKWVE 72
           L  QS+ A V+KG+WK++LK K+ S L   +I  Q++ +LS +    GPSLSW+FF W +
Sbjct: 12  LIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTD 71

Query: 73  LIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNAL--ATTYDNSD 132
            +P  KHSLQSSW MI ILT+HKHF+TA  L++K+A ++ +SSP VL +L    + D  D
Sbjct: 72  SLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPED 131

Query: 133 VNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKI 192
           V +H+ SWLMI Y    M  D+I V E +R  G KPHL ACTVLLNSL K RLTD VWKI
Sbjct: 132 V-SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKI 191

Query: 193 YKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCK 252
           +KKMV++GVV NIH+YNVL+HAC KSGD EKAE+LLSEME + V PD++TYNTLIS+YCK
Sbjct: 192 FKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK 251

Query: 253 KSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIK-DVSPNHVTY 312
           KS+H+EAL VQDRMER GV+P+I+TYNS I+GF +EGRMREA +LFREIK DV+ NHVTY
Sbjct: 252 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTY 311

Query: 313 TTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGE 372
           TTLIDGYCR+ND++EALRL +VME++G   GVVTYNSILRKLCE+GRIR+AN+LL EM  
Sbjct: 312 TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 371

Query: 373 RKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMES 432
           +K+EPDN+TCNTL+NAYCKI DM SA+KVK KM+++GL+LD ++YKALIHGF +V ++E+
Sbjct: 372 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 431

Query: 433 AKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIR 492
           AKE LF M++ G  PGY TYSWLVD +     +  I  LL+EF  RG C D+++YR LIR
Sbjct: 432 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 491

Query: 493 RLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMAKRRLMV 552
           R+C  E+V +A+ ++ +M++KG+ GDSVI+T++AYAYW+ GK   AS +   M  RRLMV
Sbjct: 492 RICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMV 551

Query: 553 TLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNL 592
            LK+Y+  +ASY  DN +L  FW HV +  L+SKSI +E+ ++ +
Sbjct: 552 NLKLYKSISASYAGDNDVLRFFWSHVGDRCLISKSILREMNRSEV 595

[Close]

BLAST of Carg25931 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.9e-67
Identity = 148/505 (29.31%), Postives = 266/505 (52.67%), Query Frame = 0


Query: 33  PKISSSLTSISIHQILLQLSFY-CSGPSLS-WAFFKWVELIPDYKHSLQSSWTMICILTE 92
           P I   L S+S+H ++  ++    S P  S +AFFK++   P ++ ++++ + +   L  
Sbjct: 71  PSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAV 130

Query: 93  HKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAHILSWLMIIYVNCKMSQDAI 152
           H+ F  AQ+L+E +  +   +S S +         + +   ++  LMI Y +     DAI
Sbjct: 131 HEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAI 190

Query: 153 QVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKMVRIGVVPNIHIYNVLIHAC 212
           Q     R H F   +  C  LL+ + K   T  +W  Y +++  G   N++++N+L++  
Sbjct: 191 QCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF 250

Query: 213 CKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLHYEALCVQDRMERGGVSPDI 272
           CK G++  A+++  E+  R + P + ++NTLI+ YCK     E   ++ +ME+    PD+
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDV 310

Query: 273 ITYNSLIYGFCKEGRMREAVKLFREI--KDVSPNHVTYTTLIDGYCRVNDLEEALRLCKV 332
            TY++LI   CKE +M  A  LF E+  + + PN V +TTLI G+ R  +++      + 
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370

Query: 333 MEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLVNAYCKIGD 392
           M +KGLQ  +V YN+++   C+ G +  A  +++ M  R + PD +T  TL++ +C+ GD
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430

Query: 393 MKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELLFVMLDAGLCPGYCTYSW 452
           +++AL+++ +M   G++LD   + AL+ G  +   +  A+  L  ML AG+ P   TY+ 
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490

Query: 453 LVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHRERVGFAEQIYSTMQQKG 512
           ++DA+CK G+      LL E  + GH   +  Y  L+  LC   ++  A+ +   M   G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550

Query: 513 ISGDSVIYTSLAYAYWKEGKSNHAS 534
           +  D + Y +L      EG   HA+
Sbjct: 551 VVPDDITYNTLL-----EGHHRHAN 570

[Close]

BLAST of Carg25931 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-67
Identity = 152/544 (27.94%), Postives = 261/544 (47.98%), Query Frame = 0


Query: 72  PDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAH 131
           P++KH+  S   MI IL        AQ+ + ++  +  +S   ++N+L +T+ N   N  
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166

Query: 132 ILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKM 191
           +   L+  YV  +  ++A +    +R  GF   + AC  L+ SL +    +L W +Y+++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 192 VRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLH 251
            R GV  N++  N++++A CK G +EK    LS+++ + V PD+ TYNTLIS Y  K L 
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286

Query: 252 YEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREI--------------- 311
            EA  + + M   G SP + TYN++I G CK G+   A ++F E+               
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346

Query: 312 ----------------------KDV----------------------------------- 371
                                 +DV                                   
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406

Query: 372 SPNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANK 431
            P++V YT LI GYCR   +  A+ L   M  +G  + VVTYN+IL  LC+   + +A+K
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466

Query: 432 LLNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFY 491
           L NEM ER + PD+ T   L++ +CK+G++++A+++  KM +  ++LD  TY  L+ GF 
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526

Query: 492 RVRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLS 544
           +V D+++AKE+   M+   + P   +YS LV+A C  G+      + DE +++     + 
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586

[Close]

BLAST of Carg25931 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-61
Identity = 155/536 (28.92%), Postives = 264/536 (49.25%), Query Frame = 0


Query: 38  SLTSISIHQILLQLSFYCSGPSLSWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTA 97
           +L  I + ++L++L      P L++ FFKW      +KHS++S   +  IL   + +  A
Sbjct: 105 TLAPIWVPRVLVELK---EDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDA 164

Query: 98  QNLVEKIAHKDFISSPSVLNALATTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMR 157
            ++++++      +   V + L +T +       +   L  + ++  M ++AIQ    M+
Sbjct: 165 NSVLKEMVLSK--ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMK 224

Query: 158 LHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVE 217
                P   +C  LL+  AK   TD V + +K M+  G  P +  YN++I   CK GDVE
Sbjct: 225 RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 284

Query: 218 KAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLI 277
            A  L  EM+ R                                   G+ PD +TYNS+I
Sbjct: 285 AARGLFEEMKFR-----------------------------------GLVPDTVTYNSMI 344

Query: 278 YGFCKEGRMREAVKLFREIKDV--SPNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQ 337
            GF K GR+ + V  F E+KD+   P+ +TY  LI+ +C+   L   L   + M+  GL+
Sbjct: 345 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 404

Query: 338 LGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKV 397
             VV+Y++++   C+EG ++ A K   +M    + P+  T  +L++A CKIG++  A ++
Sbjct: 405 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 464

Query: 398 KSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCK 457
            ++ML  G++ +  TY ALI G      M+ A+EL   M  AG+ P   +Y+ L+  + K
Sbjct: 465 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 524

Query: 458 LGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVI 517
             N    + LL+E   RG   DL +Y   I  LC  E++  A+ + + M++ GI  +S+I
Sbjct: 525 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 584

Query: 518 YTSLAYAYWKEGKSNHASEMLHEMAKRRLMVTLKIYRCFNASYGCDNRILNLFWDH 572
           YT+L  AY+K G       +L EM +  + VT+  + C      C N++++   D+
Sbjct: 585 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF-CVLIDGLCKNKLVSKAVDY 599

[Close]

BLAST of Carg25931 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-61
Identity = 148/521 (28.41%), Postives = 245/521 (47.02%), Query Frame = 0


Query: 60  LSWAFFKWVELIP--DYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLN 119
           L+  F KWV   P  +  H +Q       IL   + +  A++++++++     SS  V  
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSS-FVFG 111

Query: 120 ALATTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAK 179
           AL TTY   + N  +   L+ +Y+   M QD++++   M L+GF P ++ C  +L S+ K
Sbjct: 112 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 171

Query: 180 DRLTDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYT 239
                 VW   K+M++  + P++  +N+LI+  C  G  EK+  L+ +ME    +P + T
Sbjct: 172 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 231

Query: 240 YNTLISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIK 299
           YNT++  YCKK     A+ + D M+  GV  D+ TYN LI+  C+  R+ +   L R+++
Sbjct: 232 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 291

Query: 300 -------------------------------------DVSPNHVTYTTLIDGYCRVNDLE 359
                                                 +SPNHVT+  LIDG+    + +
Sbjct: 292 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 351

Query: 360 EALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLV 419
           EAL++  +MEAKGL    V+Y  +L  LC+      A      M    V    +T   ++
Sbjct: 352 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 411

Query: 420 NAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELLFVMLDAGLC 479
           +  CK G +  A+ + ++M   G+  D  TY ALI+GF +V   ++AKE++  +   GL 
Sbjct: 412 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 471

Query: 480 PGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHRERVGFAEQI 539
           P    YS L+   C++G     I + +  +  GH  D   +  L+  LC   +V  AE+ 
Sbjct: 472 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 531

Query: 540 YSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMAK 542
              M   GI  ++V +  L   Y   G+   A  +  EM K
Sbjct: 532 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

[Close]

BLAST of Carg25931 vs. ExPASy TrEMBL
Match: A0A6J1H1B2 (pentatricopeptide repeat-containing protein At5g38730 OS=Cucurbita moschata OX=3662 GN=LOC111458672 PE=4 SV=1)

HSP 1 Score: 1215.7 bits (3144), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL
Sbjct: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL
Sbjct: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT
Sbjct: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS
Sbjct: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR
Sbjct: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV
Sbjct: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
           YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA
Sbjct: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540

Query: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 595
           KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG
Sbjct: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 594

[Close]

BLAST of Carg25931 vs. ExPASy TrEMBL
Match: A0A6J1KC71 (pentatricopeptide repeat-containing protein At5g38730 OS=Cucurbita maxima OX=3661 GN=LOC111492548 PE=4 SV=1)

HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 584/594 (98.32%), Postives = 589/594 (99.16%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL
Sbjct: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHF+TAQNLVEKIAHKDFISSP VLNALA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFKTAQNLVEKIAHKDFISSPLVLNALA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL
Sbjct: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT
Sbjct: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS
Sbjct: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR
Sbjct: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMES+KELLFVMLDAGLCPGYCTYSWLVDAYC+LGNEGAIISLLDEFLTRGHCVDLSV
Sbjct: 421 VRDMESSKELLFVMLDAGLCPGYCTYSWLVDAYCELGNEGAIISLLDEFLTRGHCVDLSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
           YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSN ASEMLHEMA
Sbjct: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNLASEMLHEMA 540

Query: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 595
           KRRLMVTLKIYRCFNASYGCDN +L+LFWDH SEGGLLSKSITKEIQK NLQTG
Sbjct: 541 KRRLMVTLKIYRCFNASYGCDNHMLHLFWDHASEGGLLSKSITKEIQKMNLQTG 594

[Close]

BLAST of Carg25931 vs. ExPASy TrEMBL
Match: A0A6J1DZ68 (pentatricopeptide repeat-containing protein At5g38730 OS=Momordica charantia OX=3673 GN=LOC111024397 PE=4 SV=1)

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 522/594 (87.88%), Postives = 557/594 (93.77%), Query Frame = 0


Query: 1   MAGLDSICCETNLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSL 60
           MAGL S+  ETNLF+QSVFAIVVKGHWKHLLKPKISSSLTSISIHQIL +LSFYCSGPSL
Sbjct: 1   MAGLVSLSGETNLFVQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILFRLSFYCSGPSL 60

Query: 61  SWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALA 120
           SWAFFKWVELIPDYKHSLQSSWTM+CILTEH+HF+TAQNL+E IA KDF+SSPSVLN LA
Sbjct: 61  SWAFFKWVELIPDYKHSLQSSWTMVCILTEHRHFKTAQNLLENIARKDFMSSPSVLNCLA 120

Query: 121 TTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRL 180
           TT DN DVNAHI SWLMIIYVNCKMSQDAIQVLEYMRLHG +PHLHACTVLLNSLAKDRL
Sbjct: 121 TTCDNPDVNAHIFSWLMIIYVNCKMSQDAIQVLEYMRLHGIRPHLHACTVLLNSLAKDRL 180

Query: 181 TDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNT 240
           TD+VWKIYKKMV+IGV+PNIHIYNVLIHACCKSGDVEKAEQ+LSEMEL+ V PDLYTYNT
Sbjct: 181 TDMVWKIYKKMVQIGVLPNIHIYNVLIHACCKSGDVEKAEQILSEMELKSVFPDLYTYNT 240

Query: 241 LISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVS 300
           LISLY KKS+HYEALCVQDRMERGG+ PDI+TYN+LIYGFCKE RMREAVKLFREIKD S
Sbjct: 241 LISLYSKKSMHYEALCVQDRMERGGIRPDIVTYNALIYGFCKESRMREAVKLFREIKDAS 300

Query: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKL 360
           PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGL LGVVTYNSILRKLCEEGRIRDANKL
Sbjct: 301 PNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLHLGVVTYNSILRKLCEEGRIRDANKL 360

Query: 361 LNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYR 420
           LNEM ERKVEPDNVTCNTL+NAYCKIGDMKSALKVK+KMLDAGLQLDSFTYKALIHGF R
Sbjct: 361 LNEMAERKVEPDNVTCNTLINAYCKIGDMKSALKVKNKMLDAGLQLDSFTYKALIHGFCR 420

Query: 421 VRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSV 480
           VRDMESAKE+LF MLD GLCP YCTYSWLVD YC+ GNEGAIISLLDEFLTRG CVD+SV
Sbjct: 421 VRDMESAKEVLFSMLDVGLCPAYCTYSWLVDGYCEQGNEGAIISLLDEFLTRGTCVDVSV 480

Query: 481 YRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMA 540
            RALIRRLCH+E+VG+AE+IY +M+ +GISGDSVIYTSLAYAYWKEGKSN A  ML EM 
Sbjct: 481 CRALIRRLCHKEKVGYAEKIYHSMEHRGISGDSVIYTSLAYAYWKEGKSNLALGMLCEMT 540

Query: 541 KRRLMVTLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNLQTG 595
           KRRLMVTLKIYRCFNASYGCDNRIL+LFWDHV+E GL+S+SIT EI+K NLQTG
Sbjct: 541 KRRLMVTLKIYRCFNASYGCDNRILHLFWDHVAERGLMSRSITVEIRKMNLQTG 594

[Close]

BLAST of Carg25931 vs. ExPASy TrEMBL
Match: A0A0A0KSX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289620 PE=4 SV=1)

HSP 1 Score: 1049.3 bits (2712), Expect = 6.1e-303
Identity = 508/577 (88.04%), Postives = 538/577 (93.24%), Query Frame = 0


Query: 12  NLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSLSWAFFKWVELI 71
           NL +QS+FA+VVKGHW HLLKPKISSSLTS SIHQILL+LSFYCSGPSLSWAFFKWVELI
Sbjct: 2   NLLVQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVELI 61

Query: 72  PDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAH 131
           PDYKHSLQSSW MI ILTEHKHF+TAQ L+EKIAHKDFISSP VLNAL T+YDN DVNAH
Sbjct: 62  PDYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAH 121

Query: 132 ILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKM 191
           ILSWLMIIYVNCKM QDAIQVLEYMRLHGFKP+LHACTVLLNSLAKDRLTD VWK YKKM
Sbjct: 122 ILSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKM 181

Query: 192 VRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLH 251
           +R+GVVPNIHIYNVLIHACCKSGDVEKAEQL+ EMEL+ V PDLYTYNTLISLY +KSLH
Sbjct: 182 IRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLH 241

Query: 252 YEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVSPNHVTYTTLID 311
           YEALCVQDRMER GVSPDI+TYNSLIYGFCKEG+MREAVKLFREIKDVSPNHVTYTTLID
Sbjct: 242 YEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVSPNHVTYTTLID 301

Query: 312 GYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEP 371
           GYCRVND EEALRLCKVMEAKGL LGV TYNS+LRKLCEEGRIRDANKLLNEMGERKVEP
Sbjct: 302 GYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEP 361

Query: 372 DNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELL 431
           DNVTCNTL+NAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGF  VRDMESAKELL
Sbjct: 362 DNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELL 421

Query: 432 FVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHR 491
           F MLD GL PGYCTYSWLVD YC+LGNEGAIISLLDEFLT+G+CVDLSV RALIRRLCH+
Sbjct: 422 FCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQ 481

Query: 492 ERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMAKRRLMVTLKIY 551
           ERVGFAE+IYSTM  +G+SGDSVIYTSLAYAYWK+GKSN  SEML EM KR L++ LK+Y
Sbjct: 482 ERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKLY 541

Query: 552 RCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQK 589
           RCFNASYG  N IL+LFWDHV+E GLLSKSITKEIQK
Sbjct: 542 RCFNASYGPHNSILHLFWDHVAERGLLSKSITKEIQK 578

[Close]

BLAST of Carg25931 vs. ExPASy TrEMBL
Match: A0A5A7VJW1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001120 PE=4 SV=1)

HSP 1 Score: 1048.9 bits (2711), Expect = 8.0e-303
Identity = 507/577 (87.87%), Postives = 535/577 (92.72%), Query Frame = 0


Query: 12  NLFLQSVFAIVVKGHWKHLLKPKISSSLTSISIHQILLQLSFYCSGPSLSWAFFKWVELI 71
           NL LQS+FA+VVKGHW HLLKPKISSSLTS SIHQIL +LSFYCSGPSLSWAFFKWVELI
Sbjct: 2   NLLLQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILFRLSFYCSGPSLSWAFFKWVELI 61

Query: 72  PDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAH 131
           PDYKHSLQSSW MI ILTEHKHF+TAQ L+EKIAHKDFISSP VLNAL T+YDN DVNAH
Sbjct: 62  PDYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAH 121

Query: 132 ILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKM 191
           ILSWLMIIYVNCKM QDAIQV EYMRLHGFKPHLHACTVLLNSLAKDRLTD VWKIYKKM
Sbjct: 122 ILSWLMIIYVNCKMPQDAIQVFEYMRLHGFKPHLHACTVLLNSLAKDRLTDTVWKIYKKM 181

Query: 192 VRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLH 251
           +R+GVVPNIHIYNVLIHACCKSGDVEKAEQL+ EMEL+ V PDLYTYNTLISLY +KSLH
Sbjct: 182 IRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLH 241

Query: 252 YEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIKDVSPNHVTYTTLID 311
           YEALCVQDRMER GVSPDI+TYNSLIYGFCKEG+MREAVKLFREIKDVSPNHVTYTTLID
Sbjct: 242 YEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVSPNHVTYTTLID 301

Query: 312 GYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEP 371
           GYCRVND EEALRLCKVME KGL LGV TYNS+LRKLC+EGRIRDANKLLNEMGERKVEP
Sbjct: 302 GYCRVNDFEEALRLCKVMEVKGLHLGVATYNSVLRKLCKEGRIRDANKLLNEMGERKVEP 361

Query: 372 DNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELL 431
           DNVTCNTL+NAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGF  VRDMESAKELL
Sbjct: 362 DNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELL 421

Query: 432 FVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHR 491
           F MLD GL PGYCTYSWLVD YC+LGNEGAIISLLDEFLTRG+CVDLSV RALIRRLCHR
Sbjct: 422 FCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTRGYCVDLSVCRALIRRLCHR 481

Query: 492 ERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMAKRRLMVTLKIY 551
           ERVGFAE+IYS M  +G+SGDSVIYTSLAYAYWK+GKSN  SEML EM KR L++ LK+Y
Sbjct: 482 ERVGFAEKIYSAMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKLY 541

Query: 552 RCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQK 589
           RCFNASYG  N IL+LFWDHV+E GLLS+SITKEIQK
Sbjct: 542 RCFNASYGPHNSILHLFWDHVAERGLLSRSITKEIQK 578

[Close]

BLAST of Carg25931 vs. TAIR 10
Match: AT5G38730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 715.7 bits (1846), Expect = 3.1e-206
Identity = 345/585 (58.97%), Postives = 450/585 (76.92%), Query Frame = 0


Query: 13  LFLQSVFAIVVKGHWKHLLKPKISSSLTSISI-HQILLQLSFYC--SGPSLSWAFFKWVE 72
           L  QS+ A V+KG+WK++LK K+ S L   +I  Q++ +LS +    GPSLSW+FF W +
Sbjct: 12  LIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTD 71

Query: 73  LIPDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNAL--ATTYDNSD 132
            +P  KHSLQSSW MI ILT+HKHF+TA  L++K+A ++ +SSP VL +L    + D  D
Sbjct: 72  SLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPED 131

Query: 133 VNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKI 192
           V +H+ SWLMI Y    M  D+I V E +R  G KPHL ACTVLLNSL K RLTD VWKI
Sbjct: 132 V-SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKI 191

Query: 193 YKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCK 252
           +KKMV++GVV NIH+YNVL+HAC KSGD EKAE+LLSEME + V PD++TYNTLIS+YCK
Sbjct: 192 FKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK 251

Query: 253 KSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIK-DVSPNHVTY 312
           KS+H+EAL VQDRMER GV+P+I+TYNS I+GF +EGRMREA +LFREIK DV+ NHVTY
Sbjct: 252 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTY 311

Query: 313 TTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGE 372
           TTLIDGYCR+ND++EALRL +VME++G   GVVTYNSILRKLCE+GRIR+AN+LL EM  
Sbjct: 312 TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 371

Query: 373 RKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMES 432
           +K+EPDN+TCNTL+NAYCKI DM SA+KVK KM+++GL+LD ++YKALIHGF +V ++E+
Sbjct: 372 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 431

Query: 433 AKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIR 492
           AKE LF M++ G  PGY TYSWLVD +     +  I  LL+EF  RG C D+++YR LIR
Sbjct: 432 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 491

Query: 493 RLCHRERVGFAEQIYSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMAKRRLMV 552
           R+C  E+V +A+ ++ +M++KG+ GDSVI+T++AYAYW+ GK   AS +   M  RRLMV
Sbjct: 492 RICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMV 551

Query: 553 TLKIYRCFNASYGCDNRILNLFWDHVSEGGLLSKSITKEIQKTNL 592
            LK+Y+  +ASY  DN +L  FW HV +  L+SKSI +E+ ++ +
Sbjct: 552 NLKLYKSISASYAGDNDVLRFFWSHVGDRCLISKSILREMNRSEV 595

[Close]

BLAST of Carg25931 vs. TAIR 10
Match: AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-68
Identity = 148/505 (29.31%), Postives = 266/505 (52.67%), Query Frame = 0


Query: 33  PKISSSLTSISIHQILLQLSFY-CSGPSLS-WAFFKWVELIPDYKHSLQSSWTMICILTE 92
           P I   L S+S+H ++  ++    S P  S +AFFK++   P ++ ++++ + +   L  
Sbjct: 71  PSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAV 130

Query: 93  HKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAHILSWLMIIYVNCKMSQDAI 152
           H+ F  AQ+L+E +  +   +S S +         + +   ++  LMI Y +     DAI
Sbjct: 131 HEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAI 190

Query: 153 QVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKMVRIGVVPNIHIYNVLIHAC 212
           Q     R H F   +  C  LL+ + K   T  +W  Y +++  G   N++++N+L++  
Sbjct: 191 QCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF 250

Query: 213 CKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLHYEALCVQDRMERGGVSPDI 272
           CK G++  A+++  E+  R + P + ++NTLI+ YCK     E   ++ +ME+    PD+
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDV 310

Query: 273 ITYNSLIYGFCKEGRMREAVKLFREI--KDVSPNHVTYTTLIDGYCRVNDLEEALRLCKV 332
            TY++LI   CKE +M  A  LF E+  + + PN V +TTLI G+ R  +++      + 
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370

Query: 333 MEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLVNAYCKIGD 392
           M +KGLQ  +V YN+++   C+ G +  A  +++ M  R + PD +T  TL++ +C+ GD
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430

Query: 393 MKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELLFVMLDAGLCPGYCTYSW 452
           +++AL+++ +M   G++LD   + AL+ G  +   +  A+  L  ML AG+ P   TY+ 
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490

Query: 453 LVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHRERVGFAEQIYSTMQQKG 512
           ++DA+CK G+      LL E  + GH   +  Y  L+  LC   ++  A+ +   M   G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550

Query: 513 ISGDSVIYTSLAYAYWKEGKSNHAS 534
           +  D + Y +L      EG   HA+
Sbjct: 551 VVPDDITYNTLL-----EGHHRHAN 570

[Close]

BLAST of Carg25931 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.8e-68
Identity = 152/544 (27.94%), Postives = 261/544 (47.98%), Query Frame = 0


Query: 72  PDYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLNALATTYDNSDVNAH 131
           P++KH+  S   MI IL        AQ+ + ++  +  +S   ++N+L +T+ N   N  
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166

Query: 132 ILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKM 191
           +   L+  YV  +  ++A +    +R  GF   + AC  L+ SL +    +L W +Y+++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 192 VRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLH 251
            R GV  N++  N++++A CK G +EK    LS+++ + V PD+ TYNTLIS Y  K L 
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286

Query: 252 YEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREI--------------- 311
            EA  + + M   G SP + TYN++I G CK G+   A ++F E+               
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346

Query: 312 ----------------------KDV----------------------------------- 371
                                 +DV                                   
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406

Query: 372 SPNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANK 431
            P++V YT LI GYCR   +  A+ L   M  +G  + VVTYN+IL  LC+   + +A+K
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466

Query: 432 LLNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFY 491
           L NEM ER + PD+ T   L++ +CK+G++++A+++  KM +  ++LD  TY  L+ GF 
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526

Query: 492 RVRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLS 544
           +V D+++AKE+   M+   + P   +YS LV+A C  G+      + DE +++     + 
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586

[Close]

BLAST of Carg25931 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 8.5e-63
Identity = 155/536 (28.92%), Postives = 264/536 (49.25%), Query Frame = 0


Query: 38  SLTSISIHQILLQLSFYCSGPSLSWAFFKWVELIPDYKHSLQSSWTMICILTEHKHFRTA 97
           +L  I + ++L++L      P L++ FFKW      +KHS++S   +  IL   + +  A
Sbjct: 105 TLAPIWVPRVLVELK---EDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDA 164

Query: 98  QNLVEKIAHKDFISSPSVLNALATTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMR 157
            ++++++      +   V + L +T +       +   L  + ++  M ++AIQ    M+
Sbjct: 165 NSVLKEMVLSK--ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMK 224

Query: 158 LHGFKPHLHACTVLLNSLAKDRLTDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVE 217
                P   +C  LL+  AK   TD V + +K M+  G  P +  YN++I   CK GDVE
Sbjct: 225 RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 284

Query: 218 KAEQLLSEMELRFVSPDLYTYNTLISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLI 277
            A  L  EM+ R                                   G+ PD +TYNS+I
Sbjct: 285 AARGLFEEMKFR-----------------------------------GLVPDTVTYNSMI 344

Query: 278 YGFCKEGRMREAVKLFREIKDV--SPNHVTYTTLIDGYCRVNDLEEALRLCKVMEAKGLQ 337
            GF K GR+ + V  F E+KD+   P+ +TY  LI+ +C+   L   L   + M+  GL+
Sbjct: 345 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 404

Query: 338 LGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLVNAYCKIGDMKSALKV 397
             VV+Y++++   C+EG ++ A K   +M    + P+  T  +L++A CKIG++  A ++
Sbjct: 405 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 464

Query: 398 KSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELLFVMLDAGLCPGYCTYSWLVDAYCK 457
            ++ML  G++ +  TY ALI G      M+ A+EL   M  AG+ P   +Y+ L+  + K
Sbjct: 465 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 524

Query: 458 LGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHRERVGFAEQIYSTMQQKGISGDSVI 517
             N    + LL+E   RG   DL +Y   I  LC  E++  A+ + + M++ GI  +S+I
Sbjct: 525 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 584

Query: 518 YTSLAYAYWKEGKSNHASEMLHEMAKRRLMVTLKIYRCFNASYGCDNRILNLFWDH 572
           YT+L  AY+K G       +L EM +  + VT+  + C      C N++++   D+
Sbjct: 585 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF-CVLIDGLCKNKLVSKAVDY 599

[Close]

BLAST of Carg25931 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-62
Identity = 148/521 (28.41%), Postives = 245/521 (47.02%), Query Frame = 0


Query: 60  LSWAFFKWVELIP--DYKHSLQSSWTMICILTEHKHFRTAQNLVEKIAHKDFISSPSVLN 119
           L+  F KWV   P  +  H +Q       IL   + +  A++++++++     SS  V  
Sbjct: 92  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSS-FVFG 151

Query: 120 ALATTYDNSDVNAHILSWLMIIYVNCKMSQDAIQVLEYMRLHGFKPHLHACTVLLNSLAK 179
           AL TTY   + N  +   L+ +Y+   M QD++++   M L+GF P ++ C  +L S+ K
Sbjct: 152 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 211

Query: 180 DRLTDLVWKIYKKMVRIGVVPNIHIYNVLIHACCKSGDVEKAEQLLSEMELRFVSPDLYT 239
                 VW   K+M++  + P++  +N+LI+  C  G  EK+  L+ +ME    +P + T
Sbjct: 212 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 271

Query: 240 YNTLISLYCKKSLHYEALCVQDRMERGGVSPDIITYNSLIYGFCKEGRMREAVKLFREIK 299
           YNT++  YCKK     A+ + D M+  GV  D+ TYN LI+  C+  R+ +   L R+++
Sbjct: 272 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 331

Query: 300 -------------------------------------DVSPNHVTYTTLIDGYCRVNDLE 359
                                                 +SPNHVT+  LIDG+    + +
Sbjct: 332 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 391

Query: 360 EALRLCKVMEAKGLQLGVVTYNSILRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLV 419
           EAL++  +MEAKGL    V+Y  +L  LC+      A      M    V    +T   ++
Sbjct: 392 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 451

Query: 420 NAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFYRVRDMESAKELLFVMLDAGLC 479
           +  CK G +  A+ + ++M   G+  D  TY ALI+GF +V   ++AKE++  +   GL 
Sbjct: 452 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 511

Query: 480 PGYCTYSWLVDAYCKLGNEGAIISLLDEFLTRGHCVDLSVYRALIRRLCHRERVGFAEQI 539
           P    YS L+   C++G     I + +  +  GH  D   +  L+  LC   +V  AE+ 
Sbjct: 512 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 571

Query: 540 YSTMQQKGISGDSVIYTSLAYAYWKEGKSNHASEMLHEMAK 542
              M   GI  ++V +  L   Y   G+   A  +  EM K
Sbjct: 572 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611

The following BLAST results are available for this feature:

BLAST of Carg25931 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957214.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g38730 [Cucurbita moschata] >KAG7...	[more]
XP_023547207.1	0.0e+00	99.66	pentatricopeptide repeat-containing protein At5g38730 [Cucurbita pepo subsp. pep...	[more]
XP_022997664.1	0.0e+00	98.32	pentatricopeptide repeat-containing protein At5g38730 [Cucurbita maxima]	[more]
KAG6601641.1	0.0e+00	99.82	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022157769.1	0.0e+00	87.88	pentatricopeptide repeat-containing protein At5g38730 [Momordica charantia] >XP_...	[more]

BLAST of Carg25931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKR3	4.4e-205	58.97	Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX...	[more]
O04491	1.9e-67	29.31	Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th...	[more]
Q9LFC5	2.5e-67	27.94	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX...	[more]
P0C894	1.2e-61	28.92	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
Q9LVQ5	2.0e-61	28.41	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg25931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1B2	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g38730 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KC71	0.0e+00	98.32	pentatricopeptide repeat-containing protein At5g38730 OS=Cucurbita maxima OX=366...	[more]
A0A6J1DZ68	0.0e+00	87.88	pentatricopeptide repeat-containing protein At5g38730 OS=Momordica charantia OX=...	[more]
A0A0A0KSX6	6.1e-303	88.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289620 PE=4 SV=1	[more]
A0A5A7VJW1	8.0e-303	87.87	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg25931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38730.1	3.1e-206	58.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G09680.1	1.4e-68	29.31	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G01110.1	1.8e-68	27.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02150.1	8.5e-63	28.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G55840.1	1.5e-62	28.41	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 268..315 e-value: 9.5E-17 score: 60.9 coord: 198..247 e-value: 8.3E-16 score: 57.9 coord: 337..385 e-value: 1.7E-15 score: 56.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 271..298 e-value: 3.0E-8 score: 31.3 coord: 409..441 e-value: 5.4E-4 score: 18.0 coord: 304..335 e-value: 3.1E-8 score: 31.3 coord: 374..407 e-value: 1.9E-7 score: 28.8 coord: 167..199 e-value: 3.0E-4 score: 18.8 coord: 202..234 e-value: 8.8E-10 score: 36.2 coord: 480..512 e-value: 0.0016 score: 16.5 coord: 236..270 e-value: 8.1E-7 score: 26.8 coord: 339..372 e-value: 5.1E-8 score: 30.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 394..453 e-value: 8.0E-8 score: 32.3 coord: 500..545 e-value: 0.0015 score: 18.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 168..196 e-value: 0.037 score: 14.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 512..546 score: 9.021208
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 11.969797
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 164..198 score: 9.185627
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 302..336 score: 12.276713
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 10.742131
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 372..406 score: 11.586152
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 199..233 score: 12.660359
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 234..268 score: 11.750571
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 477..511 score: 9.174665
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 269..299 score: 11.684803
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 354..474 e-value: 5.3E-31 score: 110.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 81..251 e-value: 3.8E-31 score: 110.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 475..544 e-value: 1.3E-11 score: 46.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 252..353 e-value: 1.5E-31 score: 111.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 155..535
None	No IPR available	PANTHER	PTHR47932:SF26	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 12..589
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 12..589

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25931-RA	Carg25931-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding