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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATTGTGGCCACCGGCGTGTTCATAGGCAGTGGAGTGGGCAGGTGGTGATGGAGGATTGCGTTCGAGGTGAAGACCAACTGGGGACCACAAACCAGAGGTTTTATTGGGTTTGATAAACCTTCCACCTTCGCTAATACTCTTCCATTTTTAAAAATTTTTAAAAATACTTTAATTTAAAAAAAAAAATTAAAACAGGCCTCTAATTTTTTCTTTATCAAAATAAAAAAATATGTTGGTACACATTTAAAAAATATTTATGAATTTTTAAAAATAACATTAATTTTTTTTTAAAGATAAACATCGATAAATGGTTTCGTCTATATAATATCTTTTATTTTTATTTATAGAGATAATTAATTATACTTTTAAAATTTTATACTAAAGTACATTTTTGAATTTCTTTTTAAAAAAATTGAAGAATATTAATAAGAAAATTTTAAGTTTAAGAATATTTTTTAAAATTATTAAAAAAAAAATTGAAATAAATACTGACAAAGTTAATTATTAATTTTTTTTAAAATTAAAAATATTTTGAAGATAAAATAAAATTTACTAATATTTTTATTAATTTAGCCAAATTTTAAGTAAAAAATTTAATTAAAGATGGAGCCGAACAAAATTTTGGTCGGTCTTAAATATATATATATATATATTTTAAAAAAGCCCAAAATCCCGGATCCAAATTACCGGGTCGGTTATTGAATCGGATCAGAAGAAGTATTTGTTTCTTCTCCGCCCTTCTGTGCTGCTTCGAGTTCCTCCGGTCAGAATTGCGCACGCCACAATCAGCCACTGCTGCATCGTCGCTGCAGCCTCTTCTTTTTGCTCTCGACTTCCGATTTCTTCATCATCATCGATTTGTGAGCTTATTTCTCCGAACTTCGTATCTAGCTTCTTCATCAACATTGCCTTCCAGCTTCCAGTTTTGCTGCGGTAACCATTTCCCTCGTTCATCCCTATTTCATTTGTAATTTTGTATGCCTACCGTACTCGTTTCCTACGGAGATTTCCACCGCCTCATAGTATCACCGATTTTTTTTCTGGGGGGGAATGCGGGTGGTGGGTTATGGTTATGGGAATATTATCGTTCATATATCCAGGGTTTAGATAGGCAAAATTAATCATCTAATTTTTTTTTATTTGTTCTTAGCACGAGCTTCGTTTTAATTTTGAATTCAGTCTGTTTCTCTTCTCATAATTAACAATTGGAAGTTGGAACTCTTGCTCATTCTTTACTTGCTTGAACTGATGCCTAATGCTTTCCTTAATTTAGCTTTAGTGGTTGACATAGTTTGCTCCAATTATCTATTCTGTATATCATCTTTCCGTATAACTTGTTCTTTTTAGGTGTTAA mRNA sequence ATGGATTGTGGCCACCGGCGTGTTCATAGGCAGTGGAGTGGGCAGGTGGTGATGGAGGATTGCGTTCGAGGTGAAGACCAACTGGGGACCACAAACCAGAGCCCAAAATCCCGGATCCAAATTACCGGGTCGGTTATTGAATCGGATCAGAAGAAGTATTTGTTTCTTCTCCGCCCTTCTGTGCTGCTTCGAGTTCCTCCGGTCAGAATTGCGCACGCCACAATCAGCCACTGCTGCATCGTCGCTGCAGCCTCTTCTTTTTGCTCTCGACTTCCGATTTCTTCATCATCATCGATTTGTGAGCTTATTTCTCCGAACTTCGTATCTAGCTTCTTCATCAACATTGCCTTCCAGCTTCCAGTTTTGCTGCGGTGTTAA Coding sequence (CDS) ATGGATTGTGGCCACCGGCGTGTTCATAGGCAGTGGAGTGGGCAGGTGGTGATGGAGGATTGCGTTCGAGGTGAAGACCAACTGGGGACCACAAACCAGAGCCCAAAATCCCGGATCCAAATTACCGGGTCGGTTATTGAATCGGATCAGAAGAAGTATTTGTTTCTTCTCCGCCCTTCTGTGCTGCTTCGAGTTCCTCCGGTCAGAATTGCGCACGCCACAATCAGCCACTGCTGCATCGTCGCTGCAGCCTCTTCTTTTTGCTCTCGACTTCCGATTTCTTCATCATCATCGATTTGTGAGCTTATTTCTCCGAACTTCGTATCTAGCTTCTTCATCAACATTGCCTTCCAGCTTCCAGTTTTGCTGCGGTGTTAA Protein sequence MDCGHRRVHRQWSGQVVMEDCVRGEDQLGTTNQSPKSRIQITGSVIESDQKKYLFLLRPSVLLRVPPVRIAHATISHCCIVAAASSFCSRLPISSSSSICELISPNFVSSFFINIAFQLPVLLRC
Homology
BLAST of Carg08159 vs. NCBI nr
Match: KAG7030982.1 (hypothetical protein SDJN02_05020, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 248.1 bits (632), Expect = 4.1e-62 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 Query: 1 MDCGHRRVHRQWSGQVVMEDCVRGEDQLGTTNQSPKSRIQITGSVIESDQKKYLFLLRPS 60 MDCGHRRVHRQWSGQVVMEDCVRGEDQLGTTNQSPKSRIQITGSVIESDQKKYLFLLRPS Sbjct: 1 MDCGHRRVHRQWSGQVVMEDCVRGEDQLGTTNQSPKSRIQITGSVIESDQKKYLFLLRPS 60
Query: 61 VLLRVPPVRIAHATISHCCIVAAASSFCSRLPISSSSSICELISPNFVSSFFINIAFQLP 120 VLLRVPPVRIAHATISHCCIVAAASSFCSRLPISSSSSICELISPNFVSSFFINIAFQLP Sbjct: 61 VLLRVPPVRIAHATISHCCIVAAASSFCSRLPISSSSSICELISPNFVSSFFINIAFQLP 120
Query: 121 VLLRC 126 VLLRC Sbjct: 121 VLLRC 125
BLAST of Carg08159 vs. NCBI nr
Match: KAG6600326.1 (hypothetical protein SDJN03_05559, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 Query: 1 MDCGHRRVHRQWSGQVVMEDCVRGEDQLGTTNQ 34 MDCGHRRVHRQWSGQVVMEDCVRGEDQLGTTNQ Sbjct: 1 MDCGHRRVHRQWSGQVVMEDCVRGEDQLGTTNQ 33
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7030982.1 | 4.1e-62 | 100.00 | hypothetical protein SDJN02_05020, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6600326.1 | 1.6e-10 | 100.00 | hypothetical protein SDJN03_05559, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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