Carg08900-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08900-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein XRI1-like
Location	Carg_Chr02: 9372718 .. 9375880 (+)
Sequence length	1629
RNA-Seq Expression	Carg08900-RA
Synteny	Carg08900-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCGTCTATTAGCCCCCATTATCTAGCTCCCTAATCCAACATCCAGCGGCTGAACTGGGTCGCTCTTCAATTGCATCTTTTTCGATCGCAGTCAAGAACAATTTGCCGCTGGCACTCTTCTTTTTCTCTTGCAACCATGGACGATTCCGCCAAAAACAAGTAAAATCATCGCCCTCAACCTTCTGCTCTTTCTGTTTGTTTCTGTGATTGATTTTGTTTTCTGGGGCTTTCTTTTGCGATTTGCTGTAATGCGTTTTTTCTGGAAGATCTAGTACTTCTTGTTGATTTCTTATTTGGAGGAAGCTGCTTTGGGTTTTTGTTTCAGATTGGTGTGGGGAGTTTTGGGAGTTTGTTGTCGGATTGAGTTGTTTCTTTGATTTACCTTGATTTTCTTGCTCTGTAATCGGTAATTTGTGGTTGAAATGGAAATGAGGATGCGGCTGTTAGATCTAATTTAAGTAGTGGCCATTGCATTACTGTTTTCTTTTGTGTTTTTGTGTGTGTGTGTGTGTGTGTTTGACGGCTTGTTTTGTCATCAATGTACTGGGACATCCAGAGCTAATGACTCGCTATGTTGTTTGTAGTGTTCTTGCGGTTTTGTCCTCTTTCGGATCCCAATTGTTTAATCATTTCCTTGTCAGATAAATGGTTGTTGTTTTGTTCATTTGTTGAGAAAATCCTCCCCTTACTCCTCAAGAAGCGTGGCTTAGTGTGCTAATAGATTGAACCAAATTGTTTTCAATTTCTCTTTTGGTAGTAAGTGCTGCATCTTCATAATCGTACATTCTTGTTGCTTTAATGTGTAATTTTTCAGTGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTAGGTGAGTAGTTTCTGGTTTGTTTTGTTTTTTATGCATTATGTAATCTTGTAGGTGTTATGCTTGCTCATTCTTGGTATCTCTTTTGTTGTCATTGTCATGAACTTATATCAGAATGCCTTTGGGACGGGGTGTCTGAAAATGATGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGGTAAGGACTTTACACCCTTCTCTAACCCCTCAGTTACATCCAAGGAAATCGTTTTTTCTGAAGTTTACACTTGTATTCAGATGACAGAAACAAGAAATCAGAAGAATCCAGGGAAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAGATTTGTCTTCTAGATTTCTAAAATCACATGTAAGTGATATGCAATTCCTGCTTCTCTTGATAAGCAAGTGTACATTATGACCAAAGGATTCAGAAAGACTTGTGTCGAACGCGTTAATTTTTCAAGTTATATGTTATTGCGTCCTATGTATTTGCCAATTATTTTGCTGCATGGAGCTAAATGTCGATCTTTAATATTTGGCAGACAAGGTTTAACGACGAACAACACTGATAGGAGTTTACTTTGTCTTTTTAAATAGCTTAACGAATGTAAATATCTATGTTCCGAAGCAGGCTTCTCATGTGTCTTTTCTGTAAAGTACGACCGTGACACCATGCAACCAAACTATATAATTTGTGTGAAATTTGTAACGTTGTTTTGTTCTATTTTCAGAATAAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGGTTTGTCTCGAGCAAGATACTACTTAATGTAAAAATCGTATATCGATGTATTTGTTTGCCTCTTGGTTTGTCTGATCTCTATATATTTGCCTTAGCTAATGTGCCGACTTCTTGTCTTGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGTATGTGCCTTGTGTGCATCCATTTTTTTTAATTATTAGTTTCAATTATATGAATTCCTTATAATGTGGAACTCAGGAACTTTGCTGGGACTTCGGACAATCAAATCGATGTATCAGGTAAAGTAAAATGTTGTTACGGTTTGTGTTCGTTTATATATCATTATGAAAGATGACTGTGGTTAATTTGAACTTGTGTAGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTCCTCGGAACATAATATTTAAAGGTTCTATTCTGCTCTTGACCTTTTGAAGGTTTCTTTACAATGTTGATATACCGTGTTCATTGCTTTACGTTCCCACATTGCCTATACGTGCAGGTCGAAAGTCGTATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGATCCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGGTAAGCCTGTCGTCGGTAAAACCAAGATTCATACTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGAACGAACCATGTATAACAATTCTCGCTATCCAAACGTTCCTTTTGCCGCCCCTCGGTCATCCTTGAGGGACTTGTAAAATGTCATGGCCATGTAGTAAGCAGTACAGAAGCTGATTAATGTTCATTTTTGGTATAGAGAAAGAGAGAGGGAGAGATGTGTAGGAACATTAGGGTTGCCCTTGGAATCCCTAATCATATAACTTCATTAATATGTTTATGCCTCCAAGCGAACTCTTGTAGGTCCGAGTCCGAGTTCAAGTTCGAGTTCGATACCCATAAGGTTCGTGTCATTTTAGACTTGGAAAACAACACTCCTTATCATCATGTTTATTCTTAATGCCTTGTGGAACTCTGCTGTAATCAAAATCTTTTGGTGGAAAGCTTGAAAACTGCAGTCAGCTTTTTTATTTTTCCTGCTTTTGTGTTTGGTTGACCGTGGAAATATGAGAATCAAGTAGGATCTTATTGTCTCACAGGCTTACAGCCTTACAGGTTCTTGGTTAAAGAGAAAATAGGTGAAAAGATGTGCTTGAGAAGCCTTCCTCTCTGAGCTTGTCTTCT

mRNA sequence

TTCTTCTTCGTCTATTAGCCCCCATTATCTAGCTCCCTAATCCAACATCCAGCGGCTGAACTGGGTCGCTCTTCAATTGCATCTTTTTCGATCGCAGTCAAGAACAATTTGCCGCTGGCACTCTTCTTTTTCTCTTGCAACCATGGACGATTCCGCCAAAAACAATGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTAGAATGCCTTTGGGACGGGGTGTCTGAAAATGATGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGATGACAGAAACAAGAAATCAGAAGAATCCAGGGAAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAGATTTGTCTTCTAGATTTCTAAAATCACATAATAAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGCTAATGTGCCGACTTCTTGTCTTGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGAACTTTGCTGGGACTTCGGACAATCAAATCGATGTATCAGGTAAAGTAAAATGTTGTTACGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTCCTCGGAACATAATATTTAAAGGTCGAAAGTCGTATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGATCCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGGTAAGCCTGTCGTCGGTAAAACCAAGATTCATACTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGAACGAACCATGTATAACAATTCTCGCTATCCAAACGTTCCTTTTGCCGCCCCTCGGTCATCCTTGAGGGACTTGTAAAATGTCATGGCCATGTAGTAAGCAGTACAGAAGCTGATTAATGTTCATTTTTGGTATAGAGAAAGAGAGAGGGAGAGATGTGTAGGAACATTAGGGTTGCCCTTGGAATCCCTAATCATATAACTTCATTAATATGTTTATGCCTCCAAGCGAACTCTTGTAGGTCCGAGTCCGAGTTCAAGTTCGAGTTCGATACCCATAAGGTTCGTGTCATTTTAGACTTGGAAAACAACACTCCTTATCATCATGTTTATTCTTAATGCCTTGTGGAACTCTGCTGTAATCAAAATCTTTTGGTGGAAAGCTTGAAAACTGCAGTCAGCTTTTTTATTTTTCCTGCTTTTGTGTTTGGTTGACCGTGGAAATATGAGAATCAAGTAGGATCTTATTGTCTCACAGGCTTACAGCCTTACAGGTTCTTGGTTAAAGAGAAAATAGGTGAAAAGATGTGCTTGAGAAGCCTTCCTCTCTGAGCTTGTCTTCT

Coding sequence (CDS)

ATGGACGATTCCGCCAAAAACAATGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTAGAATGCCTTTGGGACGGGGTGTCTGAAAATGATGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGATGACAGAAACAAGAAATCAGAAGAATCCAGGGAAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAGATTTGTCTTCTAGATTTCTAAAATCACATAATAAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGCTAATGTGCCGACTTCTTGTCTTGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGAACTTTGCTGGGACTTCGGACAATCAAATCGATGTATCAGGTAAAGTAAAATGTTGTTACGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTCCTCGGAACATAATATTTAAAGGTCGAAAGTCGTATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGATCCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGGTAAGCCTGTCGTCGGTAAAACCAAGATTCATACTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGA

Protein sequence

MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Homology

[Close]

BLAST of Carg08900-RA vs. NCBI nr
Match: KAG7036253.1 (Protein XRI1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.8 bits (1662), Expect = 3.7e-181
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP
Sbjct: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240
           SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK
Sbjct: 181 SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240

Query: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300
           PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Sbjct: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300

Query: 301 ITIMRTRG 309
           ITIMRTRG
Sbjct: 301 ITIMRTRG 308

[Close]

BLAST of Carg08900-RA vs. NCBI nr
Match: XP_022930895.1 (protein XRI1-like [Cucurbita moschata] >XP_023532484.1 protein XRI1-like [Cucurbita pepo subsp. pepo] >KAG6606314.1 Protein XRI1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 620.5 bits (1599), Expect = 7.6e-174
Identity = 301/308 (97.73%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP
Sbjct: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240
           S       EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK
Sbjct: 181 S-------EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240

Query: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300
           PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Sbjct: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300

Query: 301 ITIMRTRG 309
           ITIMRTRG
Sbjct: 301 ITIMRTRG 301

[Close]

BLAST of Carg08900-RA vs. NCBI nr
Match: XP_022995967.1 (protein XRI1-like [Cucurbita maxima])

HSP 1 Score: 613.2 bits (1580), Expect = 1.2e-171
Identity = 297/308 (96.43%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDD NKKSEESRETHSQAKRRRMLQFTAQD+ETSLCCEDLSSRFLKSHNKDVSSPAA+P
Sbjct: 61  HNDDSNKKSEESRETHSQAKRRRMLQFTAQDLETSLCCEDLSSRFLKSHNKDVSSPAALP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240
           S       EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK
Sbjct: 181 S-------EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240

Query: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300
           PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEG KGS
Sbjct: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGRKGS 300

Query: 301 ITIMRTRG 309
           ITIMRTRG
Sbjct: 301 ITIMRTRG 301

[Close]

BLAST of Carg08900-RA vs. NCBI nr
Match: XP_004144384.1 (protein XRI1 [Cucumis sativus] >KGN58364.1 hypothetical protein Csa_001887 [Cucumis sativus])

HSP 1 Score: 549.7 bits (1415), Expect = 1.6e-152
Identity = 271/311 (87.14%), Postives = 285/311 (91.64%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETS+C EDLSSRFLKSHNK VSSPA
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL+FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQ 180

Query: 181 IDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFA 240
           IDVS       EFC+ APEFKSN VQHHPTR P NIIFKGRKSYIRTPTKLASSVAYPFA
Sbjct: 181 IDVS-------EFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFA 240

Query: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300
           FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGG
Sbjct: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGG 300

Query: 301 KGSITIMRTRG 309
           KGSITIMRTRG
Sbjct: 301 KGSITIMRTRG 304

[Close]

BLAST of Carg08900-RA vs. NCBI nr
Match: XP_008461886.1 (PREDICTED: protein XRI1 isoform X2 [Cucumis melo])

HSP 1 Score: 548.9 bits (1413), Expect = 2.8e-152
Identity = 272/311 (87.46%), Postives = 283/311 (91.00%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDTAKNNDAWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETSLC EDLSSRFLKSHNKDVSS A
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSRFLKSHNKDVSSLA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLGFAGTSDIQ 180

Query: 181 IDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFA 240
           IDVS       EFC+ APEFKSN V HHPTR P NIIFKGRKSYIRTPTKLASSVAYPFA
Sbjct: 181 IDVS-------EFCDGAPEFKSNVVHHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFA 240

Query: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300
           FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
Sbjct: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300

Query: 301 KGSITIMRTRG 309
           KGSITIMRTRG
Sbjct: 301 KGSITIMRTRG 304

[Close]

BLAST of Carg08900-RA vs. ExPASy Swiss-Prot
Match: Q6NLW5 (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 253.8 bits (647), Expect = 2.4e-66
Identity = 158/307 (51.47%), Postives = 190/307 (61.89%), Query Frame = 0


Query: 8   NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTH 67
           + SWNW  D Y  Q  +      +C    V+ N +D SY+F DE TPVKAC +L YHVT 
Sbjct: 9   SSSWNWQVDNYNHQPQSHFSDVPDCTMTEVTLNQEDHSYMFDDENTPVKACSELGYHVT- 68

Query: 68  NDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPD 127
            +D N+K E   ET S  KRRRMLQF  Q  ETSL   +  S  LKS  +D +    +P+
Sbjct: 69  TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETSLFSSESFSAILKSSARDDTFDELLPE 128

Query: 128 VPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS 187
               I    G S +   S  E LD   E W ADCLNDA+    P+DLNF G+ D Q+D+S
Sbjct: 129 GSQLI---EGFSEDASASSFEGLDLYAEEWYADCLNDAETPMLPDDLNF-GSPDVQVDIS 188

Query: 188 GKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKP 247
                  E+ NV PE ++  VQ   TR   N+IFKGRKS+ R  +KL SS+ YPFAFIKP
Sbjct: 189 -------EYLNVPPETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKP 248

Query: 248 CGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI 307
           CG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSI
Sbjct: 249 CGVHGGMTLKDINQKIRN-PPAKPKAHIEEPA-VIQTSAFSGKPVVGKTKIRTEGGKGSI 300

Query: 308 TIMRTRG 309
           TIMRTRG
Sbjct: 309 TIMRTRG 300

[Close]

BLAST of Carg08900-RA vs. ExPASy TrEMBL
Match: A0A6J1EY26 (protein XRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111437252 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 3.7e-174
Identity = 301/308 (97.73%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP
Sbjct: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240
           S       EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK
Sbjct: 181 S-------EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240

Query: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300
           PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Sbjct: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300

Query: 301 ITIMRTRG 309
           ITIMRTRG
Sbjct: 301 ITIMRTRG 301

[Close]

BLAST of Carg08900-RA vs. ExPASy TrEMBL
Match: A0A6J1K0G1 (protein XRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111491323 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 5.8e-172
Identity = 297/308 (96.43%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDD NKKSEESRETHSQAKRRRMLQFTAQD+ETSLCCEDLSSRFLKSHNKDVSSPAA+P
Sbjct: 61  HNDDSNKKSEESRETHSQAKRRRMLQFTAQDLETSLCCEDLSSRFLKSHNKDVSSPAALP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240
           S       EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK
Sbjct: 181 S-------EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240

Query: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300
           PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEG KGS
Sbjct: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGRKGS 300

Query: 301 ITIMRTRG 309
           ITIMRTRG
Sbjct: 301 ITIMRTRG 301

[Close]

BLAST of Carg08900-RA vs. ExPASy TrEMBL
Match: A0A0A0LBN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G628730 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 7.9e-153
Identity = 271/311 (87.14%), Postives = 285/311 (91.64%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETS+C EDLSSRFLKSHNK VSSPA
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL+FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQ 180

Query: 181 IDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFA 240
           IDVS       EFC+ APEFKSN VQHHPTR P NIIFKGRKSYIRTPTKLASSVAYPFA
Sbjct: 181 IDVS-------EFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFA 240

Query: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300
           FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGG
Sbjct: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGG 300

Query: 301 KGSITIMRTRG 309
           KGSITIMRTRG
Sbjct: 301 KGSITIMRTRG 304

[Close]

BLAST of Carg08900-RA vs. ExPASy TrEMBL
Match: A0A1S3CFL6 (protein XRI1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 272/311 (87.46%), Postives = 283/311 (91.00%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDTAKNNDAWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETSLC EDLSSRFLKSHNKDVSS A
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSRFLKSHNKDVSSLA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLGFAGTSDIQ 180

Query: 181 IDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFA 240
           IDVS       EFC+ APEFKSN V HHPTR P NIIFKGRKSYIRTPTKLASSVAYPFA
Sbjct: 181 IDVS-------EFCDGAPEFKSNVVHHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFA 240

Query: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300
           FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
Sbjct: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300

Query: 301 KGSITIMRTRG 309
           KGSITIMRTRG
Sbjct: 301 KGSITIMRTRG 304

[Close]

BLAST of Carg08900-RA vs. ExPASy TrEMBL
Match: A0A6J1E034 (protein XRI1 OS=Momordica charantia OX=3673 GN=LOC111026161 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 268/311 (86.17%), Postives = 280/311 (90.03%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+ KNND+W+WDGDGY IQKD DL   E +WDGVSENDDLSYV DETTPVKACGDLAY
Sbjct: 1   MDDAGKNNDTWDWDGDGYCIQKDNDLEIPESIWDGVSENDDLSYVLDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HV ++D RNKKSEESRETHSQAKRRRMLQF AQD+ TSLC EDLSSRFLKS NKDVSSPA
Sbjct: 61  HVAYSDGRNKKSEESRETHSQAKRRRMLQFNAQDMGTSLCSEDLSSRFLKSLNKDVSSPA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+P+VPY IPECSGLS NVP SC ENLDHSPEGWI++C NDADMHCSPEDLNFAGTSD Q
Sbjct: 121 ALPEVPYGIPECSGLSDNVPISCHENLDHSPEGWISECFNDADMHCSPEDLNFAGTSDIQ 180

Query: 181 IDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFA 240
           IDVS       EFC+V PE KSNAVQHHPTR PRNIIFKGRKSYIRTPTKLASSVAYPFA
Sbjct: 181 IDVS-------EFCDVMPELKSNAVQHHPTRAPRNIIFKGRKSYIRTPTKLASSVAYPFA 240

Query: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300
           FIKPCGFHGDVTLKDINQRIRTPPPSKLKH PEDPSQSYPTSAFSGKPVVGKTKIHTEGG
Sbjct: 241 FIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPEDPSQSYPTSAFSGKPVVGKTKIHTEGG 300

Query: 301 KGSITIMRTRG 309
           KGSITIMRTRG
Sbjct: 301 KGSITIMRTRG 304

[Close]

BLAST of Carg08900-RA vs. TAIR 10
Match: AT5G48720.2 (x-ray induced transcript 1 )

HSP 1 Score: 253.8 bits (647), Expect = 1.7e-67
Identity = 158/307 (51.47%), Postives = 190/307 (61.89%), Query Frame = 0


Query: 8   NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTH 67
           + SWNW  D Y  Q  +      +C    V+ N +D SY+F DE TPVKAC +L YHVT 
Sbjct: 9   SSSWNWQVDNYNHQPQSHFSDVPDCTMTEVTLNQEDHSYMFDDENTPVKACSELGYHVT- 68

Query: 68  NDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPD 127
            +D N+K E   ET S  KRRRMLQF  Q  ETSL   +  S  LKS  +D +    +P+
Sbjct: 69  TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETSLFSSESFSAILKSSARDDTFDELLPE 128

Query: 128 VPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS 187
               I    G S +   S  E LD   E W ADCLNDA+    P+DLNF G+ D Q+D+S
Sbjct: 129 GSQLI---EGFSEDASASSFEGLDLYAEEWYADCLNDAETPMLPDDLNF-GSPDVQVDIS 188

Query: 188 GKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKP 247
                  E+ NV PE ++  VQ   TR   N+IFKGRKS+ R  +KL SS+ YPFAFIKP
Sbjct: 189 -------EYLNVPPETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKP 248

Query: 248 CGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI 307
           CG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSI
Sbjct: 249 CGVHGGMTLKDINQKIRN-PPAKPKAHIEEPA-VIQTSAFSGKPVVGKTKIRTEGGKGSI 300

Query: 308 TIMRTRG 309
           TIMRTRG
Sbjct: 309 TIMRTRG 300

[Close]

BLAST of Carg08900-RA vs. TAIR 10
Match: AT5G48720.1 (x-ray induced transcript 1 )

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-64
Identity = 148/273 (54.21%), Postives = 176/273 (64.47%), Query Frame = 0


Query: 37  DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETS 96
           +D SY+F DE TPVKAC +L YHVT  +D N+K E   ET S  KRRRMLQF  Q  ETS
Sbjct: 9   EDHSYMFDDENTPVKACSELGYHVT-TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETS 68

Query: 97  LCCEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADC 156
           L   +  S  LKS  +D +    +P+    I    G S +   S  E LD   E W ADC
Sbjct: 69  LFSSESFSAILKSSARDDTFDELLPEGSQLI---EGFSEDASASSFEGLDLYAEEWYADC 128

Query: 157 LNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIF 216
           LNDA+    P+DLNF G+ D Q+D+S       E+ NV PE ++  VQ   TR   N+IF
Sbjct: 129 LNDAETPMLPDDLNF-GSPDVQVDIS-------EYLNVPPETETREVQRPVTRSSPNVIF 188

Query: 217 KGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQS 276
           KGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+  
Sbjct: 189 KGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRN-PPAKPKAHIEEPA-V 248

Query: 277 YPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 309
             TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Sbjct: 249 IQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 266

The following BLAST results are available for this feature:

BLAST of Carg08900-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036253.1	3.7e-181	100.00	Protein XRI1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022930895.1	7.6e-174	97.73	protein XRI1-like [Cucurbita moschata] >XP_023532484.1 protein XRI1-like [Cucurb...	[more]
XP_022995967.1	1.2e-171	96.43	protein XRI1-like [Cucurbita maxima]	[more]
XP_004144384.1	1.6e-152	87.14	protein XRI1 [Cucumis sativus] >KGN58364.1 hypothetical protein Csa_001887 [Cucu...	[more]
XP_008461886.1	2.8e-152	87.46	PREDICTED: protein XRI1 isoform X2 [Cucumis melo]	[more]

BLAST of Carg08900-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLW5	2.4e-66	51.47	Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2	[more]

BLAST of Carg08900-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EY26	3.7e-174	97.73	protein XRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111437252 PE=4 SV=1	[more]
A0A6J1K0G1	5.8e-172	96.43	protein XRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111491323 PE=4 SV=1	[more]
A0A0A0LBN6	7.9e-153	87.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G628730 PE=4 SV=1	[more]
A0A1S3CFL6	1.4e-152	87.46	protein XRI1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1	[more]
A0A6J1E034	1.5e-151	86.17	protein XRI1 OS=Momordica charantia OX=3673 GN=LOC111026161 PE=4 SV=1	[more]

BLAST of Carg08900-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48720.2	1.7e-67	51.47	x-ray induced transcript 1	[more]
AT5G48720.1	1.8e-64	54.21	x-ray induced transcript 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..308
None	No IPR available	PANTHER	PTHR33385:SF4	PROTEIN XRI1	coord: 2..308
IPR039933	Protein XRI1	PANTHER	PTHR33385	PROTEIN XRI1	coord: 2..308

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08900	Carg08900	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08900-RA:1	Carg08900-RA:1	exon
Carg08900-RA:2	Carg08900-RA:2	exon
Carg08900-RA:3	Carg08900-RA:3	exon
Carg08900-RA:4	Carg08900-RA:4	exon
Carg08900-RA:5	Carg08900-RA:5	exon
Carg08900-RA:6	Carg08900-RA:6	exon
Carg08900-RA:7	Carg08900-RA:7	exon
Carg08900-RA:8	Carg08900-RA:8	exon
Carg08900-RA:9	Carg08900-RA:9	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08900-RA:five_prime_utr	Carg08900-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08900-RA:cds	Carg08900-RA:cds	CDS
Carg08900-RA:cds	Carg08900-RA:cds_2	CDS
Carg08900-RA:cds	Carg08900-RA:cds_3	CDS
Carg08900-RA:cds	Carg08900-RA:cds_4	CDS
Carg08900-RA:cds	Carg08900-RA:cds_5	CDS
Carg08900-RA:cds	Carg08900-RA:cds_6	CDS
Carg08900-RA:cds	Carg08900-RA:cds_7	CDS
Carg08900-RA:cds	Carg08900-RA:cds_8	CDS
Carg08900-RA:cds	Carg08900-RA:cds_9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08900-RA:three_prime_utr	Carg08900-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08900-RA	Carg08900-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007143	female meiotic nuclear division
biological_process	GO:0007140	male meiotic nuclear division
biological_process	GO:0006281	DNA repair
biological_process	GO:0009555	pollen development
biological_process	GO:0010165	response to X-ray
cellular_component	GO:0005634	nucleus