MELO.jh025731.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh025731.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	DUF4283 domain-containing protein
Location	chr11: 33886278 .. 33887313 (+)
RNA-Seq Expression	MELO.jh025731.1
Synteny	MELO.jh025731.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATATCTACGAGACACTACTACAACCAAGACAAAGGGAAAGAAAAAATCCAAAAGCCTTATGACTCCTCCACTGACTCAGAATCCCCCAGGAAAACCTATGCTGAAGTTGTCTCAAGTTTTTCGAGCTCTGAGTCCGATTATTCTAAAGCCAAAAACACTTTCTCACTCAAGAGATTCCTACCGGCTCTGAAATCTGAAATTAGAAAAGAAGAAAGAAAGAATGACATTGATTGGGAAAAAACGATTATCCTGTCTAGGAGATGTTTTCATGATGACTGGGATAAAATCATAGATCGTCTCAGAGAACAAACGGACAAAAAAGACTCGTGCTTTCGCTATGTTCCTTTCCATGCAGACAAGGCTCTCCTCTTCATCAAAGACAAGGACTTAGCTAAACTGTTATGCAAAAATAATGGGTGGACTACCGTGGGTCCTTTCTATGTGAAATTTGAAAAGTGGTCAAAAAGTGTCCATGCAGATACAAAAGTGATTCCCAGCTACGGAGGTTGGACGAGATTCAGAGGCATCCCTTTACATATTTGGAATCTTAATACTTTTATTCAGATTGGAGAAGCTTGTGGCGGTTTCATAGATGCAGCGCCGGAAAGTGTCAATAAAATTGAACTAACCGAAGCTCTTATTAAAGTTAAGGAAAACTACACAGGTTTTTTACCAGCTTTCATTCAGATCCATGATGAAGAAGGTCATGTTTTCATCATTCAAACAGTCACTCACCCTGAAGGAAGATGGATGAGAGAAAGAAATCCTAGTATCCACGACTCCTTCACAAAAACTGCTGCTGAAAATTTCAACGAATTCAATTCGTATGCCGAACAGTTCACATTCAGACGTAACCTTGCCGTGATATCTAAATTAGACCTGCCGGAAAGTTCAAAGAATGGTTCTAAGCAGATAAACGCTGATTGGAAGAAGGGGCCCACAAAAACCATTAAAAAATTCAATAAAACGGTAAGTTTTTTGAATTTGAACTATGAAGGTGACAGTGACAATAGCAGCTCTTCAGAAAAAATAA

mRNA sequence

GAGATATCTACGAGACACTACTACAACCAAGACAAAGGGAAAGAAAAAATCCAAAAGCCTTATGACTCCTCCACTGACTCAGAATCCCCCAGGAAAACCTATGCTGAAGTTGTCTCAAGTTTTTCGAGCTCTGAGTCCGATTATTCTAAAGCCAAAAACACTTTCTCACTCAAGAGATTCCTACCGGCTCTGAAATCTGAAATTAGAAAAGAAGAAAGAAAGAATGACATTGATTGGGAAAAAACGATTATCCTGTCTAGGAGATGTTTTCATGATGACTGGGATAAAATCATAGATCGTCTCAGAGAACAAACGGACAAAAAAGACTCGTGCTTTCGCTATGTTCCTTTCCATGCAGACAAGGCTCTCCTCTTCATCAAAGACAAGGACTTAGCTAAACTGTTATGCAAAAATAATGGGTGGACTACCGTGGGTCCTTTCTATGTGAAATTTGAAAAGTGGTCAAAAAGTGTCCATGCAGATACAAAAGTGATTCCCAGCTACGGAGGTTGGACGAGATTCAGAGGCATCCCTTTACATATTTGGAATCTTAATACTTTTATTCAGATTGGAGAAGCTTGTGGCGGTTTCATAGATGCAGCGCCGGAAAGTGTCAATAAAATTGAACTAACCGAAGCTCTTATTAAAGTTAAGGAAAACTACACAGGTTTTTTACCAGCTTTCATTCAGATCCATGATGAAGAAGGTCATGTTTTCATCATTCAAACAGTCACTCACCCTGAAGGAAGATGGATGAGAGAAAGAAATCCTAGTATCCACGACTCCTTCACAAAAACTGCTGCTGAAAATTTCAACGAATTCAATTCGTATGCCGAACAGTTCACATTCAGACGTAACCTTGCCGTGATATCTAAATTAGACCTGCCGGAAAGTTCAAAGAATGGTTCTAAGCAGATAAACGCTGATTGGAAGAAGGGGCCCACAAAAACCATTAAAAAATTCAATAAAACGGTAAGTTTTTTGAATTTGAACTATGAAGGTGACAGTGACAATAGCAGCTCTTCAGAAAAAATAA

Coding sequence (CDS)

ATGAGAGAAAGAAATCCTAGTATCCACGACTCCTTCACAAAAACTGCTGCTGAAAATTTCAACGAATTCAATTCGTATGCCGAACAGTTCACATTCAGACGTAACCTTGCCGTGATATCTAAATTAGACCTGCCGGAAAGTTCAAAGAATGGTTCTAAGCAGATAAACGCTGATTGGAAGAAGGGGCCCACAAAAACCATTAAAAAATTCAATAAAACGGTAAGTTTTTTGAATTTGAACTATGAAGGTGACAGTGACAATAGCAGCTCTTCAGAAAAAATA

Protein sequence

MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWKKGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI

Homology

[Close]

BLAST of MELO.jh025731.1 vs. NCBI nr
Match: TYK29576.1 (hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (405), Expect = 1.38e-43
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTKTAAENFNEFN YAEQ+TFRRNLAVI+K DLPESSK GSKQ+N D K
Sbjct: 362 LRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGSKQMNNDRK 421

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTKTIKKFNKTVSFLNLNYEGDSDNS+SSEKI
Sbjct: 422 MGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKI 455

[Close]

BLAST of MELO.jh025731.1 vs. NCBI nr
Match: KAA0044449.1 (hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (405), Expect = 2.87e-43
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTKTAAENFNEFN YAEQ+TFRRNLAVI+K DLPESSK GSKQ+N D K
Sbjct: 362 LRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGSKQMNNDRK 421

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTKTIKKFNKTVSFLNLNYEGDSDNS+SSEKI
Sbjct: 422 MGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKI 455

[Close]

BLAST of MELO.jh025731.1 vs. NCBI nr
Match: KAA0039949.1 (hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK24554.1 hypothetical protein E5676_scaffold266G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (381), Expect = 3.61e-40
Identity = 76/94 (80.85%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPS+H SFTK+AAE FNEFN YAEQ+TFRRN AVI+K DLPESSK GSKQ+N D K
Sbjct: 393 LRERNPSVHGSFTKSAAEKFNEFNPYAEQYTFRRNFAVIAKPDLPESSKKGSKQMNNDRK 452

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTKTIKKFNK+VSFLNLNYEGDSD+S+SSEKI
Sbjct: 453 MGPTKTIKKFNKSVSFLNLNYEGDSDSSNSSEKI 486

[Close]

BLAST of MELO.jh025731.1 vs. NCBI nr
Match: KAA0055409.1 (mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa] >TYK22318.1 mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (322), Expect = 6.86e-35
Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTK AAENFNE+N Y EQ TF+RNLA++S+ D PE+ K+ +K++NA  K
Sbjct: 100 LRERNPSIHSSFTKNAAENFNEYNLYVEQNTFKRNLAMVSQKDSPETLKSRTKKMNACRK 159

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTK  KKFNK VSFLNLNYEGDSDNS+ S+KI
Sbjct: 160 NGPTKINKKFNKAVSFLNLNYEGDSDNSNLSDKI 193

[Close]

BLAST of MELO.jh025731.1 vs. NCBI nr
Match: KAA0044557.1 (hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (341), Expect = 7.70e-35
Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTKTAAENFNEFN YAEQFTFRRNLAVISKLDLPESSKNGSKQ+NAD K
Sbjct: 364 LRERNPSIHGSFTKTAAENFNEFNPYAEQFTFRRNLAVISKLDLPESSKNGSKQMNADRK 423

Query: 61  KGPTKTIKKFNKTV 74
           KGPTKTIKKFNKT+
Sbjct: 424 KGPTKTIKKFNKTL 437

[Close]

BLAST of MELO.jh025731.1 vs. ExPASy TrEMBL
Match: A0A5D3E0Y8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001820 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 6.70e-44
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTKTAAENFNEFN YAEQ+TFRRNLAVI+K DLPESSK GSKQ+N D K
Sbjct: 362 LRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGSKQMNNDRK 421

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTKTIKKFNKTVSFLNLNYEGDSDNS+SSEKI
Sbjct: 422 MGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKI 455

[Close]

BLAST of MELO.jh025731.1 vs. ExPASy TrEMBL
Match: A0A5A7TTA1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001820 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 1.39e-43
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTKTAAENFNEFN YAEQ+TFRRNLAVI+K DLPESSK GSKQ+N D K
Sbjct: 362 LRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGSKQMNNDRK 421

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTKTIKKFNKTVSFLNLNYEGDSDNS+SSEKI
Sbjct: 422 MGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKI 455

[Close]

BLAST of MELO.jh025731.1 vs. ExPASy TrEMBL
Match: A0A5D3DLT1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00990 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 1.75e-40
Identity = 76/94 (80.85%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPS+H SFTK+AAE FNEFN YAEQ+TFRRN AVI+K DLPESSK GSKQ+N D K
Sbjct: 393 LRERNPSVHGSFTKSAAEKFNEFNPYAEQYTFRRNFAVIAKPDLPESSKKGSKQMNNDRK 452

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTKTIKKFNK+VSFLNLNYEGDSD+S+SSEKI
Sbjct: 453 MGPTKTIKKFNKSVSFLNLNYEGDSDSSNSSEKI 486

[Close]

BLAST of MELO.jh025731.1 vs. ExPASy TrEMBL
Match: A0A5D3DFT7 (Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00270 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 3.32e-35
Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTK AAENFNE+N Y EQ TF+RNLA++S+ D PE+ K+ +K++NA  K
Sbjct: 100 LRERNPSIHSSFTKNAAENFNEYNLYVEQNTFKRNLAMVSQKDSPETLKSRTKKMNACRK 159

Query: 61  KGPTKTIKKFNKTVSFLNLNYEGDSDNSSSSEKI 94
            GPTK  KKFNK VSFLNLNYEGDSDNS+ S+KI
Sbjct: 160 NGPTKINKKFNKAVSFLNLNYEGDSDNSNLSDKI 193

[Close]

BLAST of MELO.jh025731.1 vs. ExPASy TrEMBL
Match: A0A5A7TRS9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003060 PE=4 SV=1)

HSP 1 Score: 135 bits (341), Expect = 3.73e-35
Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 1   MRERNPSIHDSFTKTAAENFNEFNSYAEQFTFRRNLAVISKLDLPESSKNGSKQINADWK 60
           +RERNPSIH SFTKTAAENFNEFN YAEQFTFRRNLAVISKLDLPESSKNGSKQ+NAD K
Sbjct: 364 LRERNPSIHGSFTKTAAENFNEFNPYAEQFTFRRNLAVISKLDLPESSKNGSKQMNADRK 423

Query: 61  KGPTKTIKKFNKTV 74
           KGPTKTIKKFNKT+
Sbjct: 424 KGPTKTIKKFNKTL 437

The following BLAST results are available for this feature:

BLAST of MELO.jh025731.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29576.1	1.38e-43	87.23	hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa]	[more]
KAA0044449.1	2.87e-43	87.23	hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa]	[more]
KAA0039949.1	3.61e-40	80.85	hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK245...	[more]
KAA0055409.1	6.86e-35	69.15	mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa] >TYK22318.1 m...	[more]
KAA0044557.1	7.70e-35	91.89	hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh025731.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh025731.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0Y8	6.70e-44	87.23	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TTA1	1.39e-43	87.23	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DLT1	1.75e-40	80.85	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DFT7	3.32e-35	69.15	Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7TRS9	3.73e-35	91.89	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of MELO.jh025731.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh025731.1.t1	MELO.jh025731.1.t1	mRNA