MELO.jh021336.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh021336.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr09: 23700232 .. 23702786 (-)
RNA-Seq Expression	MELO.jh021336.1
Synteny	MELO.jh021336.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGCCGTCGCTTTCACCAAGATCTTCCTCAACACCTCCAAGAAAACCGACCAACCGGCGATCGATATGGGCGGAGCTCAGGCCATCAAACGGATCCCCCGCATCAAGTTCCCTAAACGACATCCCAGCTCCTCTGGTCTGCCTCCGTATTCCCTTTTTCCTCATTACTCTTCTTTATTTGTTCGACGTTCTTCCTCATACTAAGCAACTCTTCGATACCCATATGAAAATGATCGTCCATGTTTGTGTTTTTTCCCCTTTTTTGCGCTTTTGTTTGTATTTGGTCGTCTCCCTGTTCTTCCTTTAGTTGAATCTTGACTTGTTCTTTGACTTAGACCTGTATTTATGGCTTTGATTCTGTTTTCTTATCGTCTGTGCCATCGTTTGATTGCTTTGAGTTGGGTTTTTCTCTCTAGTACGTTTAGATGTTTATCTGGTTTAGCTTGTTAATGGAGAATCTTGTGCATTTATGTGAACAGATGTAGGGACCAAAGATTTTTCTTCTTTTCGATTTATTGGTTTTTCTCTTCTGTCTGCTTGCTTATTGTTGCTTTCTCCACATTTGATTAGCATTTTGTTAACCTAGACTTTGAAATCTAATGACCCAGATTAGTAATTCAAGCCTCAAATAGTTTAGAATGAAACTTGATTCAAAAAGTGTAGAGGAATGGACTTTGTGAGAATTTCAAGTTGACTCAATAGATTTTGTTTATTTGATGAGTTTTATACGAGTGGGAAGTTGATTTTAGGCCTTTTATTCTTCTATTAAAGCCTTGATATCTTAGGATGACACTTGGAATGCTTAGAATGGAGGCTCATGTACTACATTTTTTTTTTTTGGCCTAAATGCATATATTTATTGTATCTTGAGAAATCGAGAAATCCTTCGTTATATATTTCTATGCCTATTTCACAATGTCTATTGTCTATTGCTATTCAATGAAATCTATTTGACAAGTCCGTTTTCCTAACACTGCCATCTCTTTGAAAAGAAAGAAAAAGAAAGAGCTTGGCCATGTATTGGAATTGTTTATTTCTTACTAACTTGGTTTAACAGACACGATCCTGATGATGCTCTTGGACAATTGTTGATGACTTGAAGCATCCTATAATAAATCGATCGATGAATTATGCCCTTTAGATGTGTTTTCTAAAGTTATGATATCAGTCATTTTATAGAATTAGTAAATACTGAAGAAAATTTTACAGGTTCTACTTCCAAGACTCCATCAAGCAATGGAGGGGATGATCATATTTTCTTCTCCTCTTTAGAAAAAGATGCCTCCAAAACTGTTGGAGGAAAAGCCTCTCTTCAGCCTAAAAGGATACCCTTGTCCAATGAGGAGATTGAGGCTATTTTGGTAATATAACTTGTTCCCATTTGGTAGTTGCTCACTTGCTTTTACCTTTGCTGATTGATCTGCTGTTTCTAATGATGCAATGTGCTTCAAGCATTCAATTTGGACTTTTCTTATTGCAAGAGAAGGAAACAAATCACCATGAGATACAAACCTTAAACCTTAGAAAATGTCATCTGTTCACGTGCTTTCACATGAGCAACATTGTCAATTGAATGACCAGCAGATTAGGGAGTTGAAAGCATGAATCATTGGTTCATGGTTAGAAAGTTGTGTTTAGCTCATCATAGCCTGTTCGTTCATGAAACAAGGAGTTGATGCCTTTTCGTCGAGTATTATACATTTCGCTTGGTTGTGGAAATGTTCACTTCTAACATGAACACTTTAGTCTGGCTAGCTTGTCTATATATAACACACATCAACACTTGTTGGACATGCACGTGACACATTTGAGTGCAATTGATGTGTTAGACGTTAGTTATTTAATGTCAAAATAGGTCGAGCATTTGTTAGATATGCATTGAACACTTAATAAGTATTCTAAAAAGAAACATGCGTGACAAAAATAATAAATTTCGAAAGCGAAATACATAAAACTAATTTTTTAAGCATATTTTTGCCATGTCCATATCCTAAACTTTAGAAAGATAGATGATATGTTGTCCTATTTGCGTTGTATCATGTTAGCATTGCTTGTATGCCCCACCTATGAAATTATTCCAGATTTTTTATTTCTAGAATGGCCCTTCTTCTATGAATCATTTATTCCTTGTTATGCTTTTTGGTGGGATGTTTTTACTCATAATTCTACAACTTATTTGCAGTTGGGTGGCTGCATCTGATGAGCTTTGAGAGTGAATGATACATACTATGGTTGTGGTTATTCTTTTCTTCCTTCTCAAGTTATAAGTTTTCATTTTTGTACTTCGAATCATATCATGTCATTACATTTTGGACTTTCTATATGTTAAAGTAATGCTTGATTTAAATATTCTTTAATAAGAGGAAACTTTATACATCTCATTCAAGTCAAATGCCAGCTTTGAAGACTCAATTTTGTGTTTACTATAATTTTTTTTATTAAAATACCATTTTCATCACCATGTTTAGTTTGTTCGACTTCAATCCTTGTACTCATAAATGTTCGATCTTAGTCTATAAACTTTAAATAAATCTTGAATTTAGCTTTTGCTGCTAA

mRNA sequence

TCGCCGTCGCTTTCACCAAGATCTTCCTCAACACCTCCAAGAAAACCGACCAACCGGCGATCGATATGGGCGGAGCTCAGGCCATCAAACGGATCCCCCGCATCAAGTTCCCTAAACGACATCCCAGCTCCTCTGGTTCTACTTCCAAGACTCCATCAAGCAATGGAGGGGATGATCATATTTTCTTCTCCTCTTTAGAAAAAGATGCCTCCAAAACTGTTGGAGGAAAAGCCTCTCTTCAGCCTAAAAGGATACCCTTGTCCAATGAGGAGATTGAGGCTATTTTGTTGGGTGGCTGCATCTGATGAGCTTTGAGAGTGAATGATACATACTATGGTTGTGGTTATTCTTTTCTTCCTTCTCAAGTTATAAGTTTTCATTTTTGTACTTCGAATCATATCATGTCATTACATTTTGGACTTTCTATATGTTAAAGTAATGCTTGATTTAAATATTCTTTAATAAGAGGAAACTTTATACATCTCATTCAAGTCAAATGCCAGCTTTGAAGACTCAATTTTGTGTTTACTATAATTTTTTTTATTAAAATACCATTTTCATCACCATGTTTAGTTTGTTCGACTTCAATCCTTGTACTCATAAATGTTCGATCTTAGTCTATAAACTTTAAATAAATCTTGAATTTAGCTTTTGCTGCTAA

Coding sequence (CDS)

ATGGGCGGAGCTCAGGCCATCAAACGGATCCCCCGCATCAAGTTCCCTAAACGACATCCCAGCTCCTCTGGTTCTACTTCCAAGACTCCATCAAGCAATGGAGGGGATGATCATATTTTCTTCTCCTCTTTAGAAAAAGATGCCTCCAAAACTGTTGGAGGAAAAGCCTCTCTTCAGCCTAAAAGGATACCCTTGTCCAATGAGGAGATTGAGGCTATTTTGTTGGGTGGCTGCATCTGA

Protein sequence

MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQPKRIPLSNEEIEAILLGGCI

Homology

[Close]

BLAST of MELO.jh021336.1 vs. NCBI nr
Match: XP_008437426.1 (PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo])

HSP 1 Score: 157 bits (397), Expect = 2.74e-48
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KRIPLSNEEIEAILLGGCI
Sbjct: 61 KRIPLSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. NCBI nr
Match: XP_004143853.1 (uncharacterized protein LOC101205349 [Cucumis sativus])

HSP 1 Score: 149 bits (376), Expect = 4.39e-45
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRH SSSGSTSKTPSS+GGDDH+FFSSLEKDASKTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHLSSSGSTSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR PLSNEEIEAILLGGCI
Sbjct: 61 KRTPLSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. NCBI nr
Match: XP_038875405.1 (uncharacterized protein LOC120067868 [Benincasa hispida])

HSP 1 Score: 139 bits (351), Expect = 2.87e-41
Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRHP+ SGSTSKTPSS+G DD IFFSSLE+ ASKTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR PLSNEEIEAILLGGCI
Sbjct: 61 KRTPLSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. NCBI nr
Match: XP_023534508.1 (uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo] >KAG6605594.1 hypothetical protein SDJN03_02911, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126 bits (317), Expect = 4.42e-36
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MGGAQA+KRIPRIKFPKRHP+ SGSTS+TP+S G DD + F SL + ASKT+GGKASLQP
Sbjct: 1  MGGAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR P+SNEEIEAILLGGCI
Sbjct: 61 KRTPMSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. NCBI nr
Match: XP_022958002.1 (uncharacterized protein LOC111459363 [Cucurbita moschata] >XP_022996319.1 uncharacterized protein LOC111491585 [Cucurbita maxima])

HSP 1 Score: 123 bits (308), Expect = 1.04e-34
Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MG AQA+KRIPRIKFPKRHP+ SGSTS+TP+S G DD + F SL + ASKT+GGKASLQP
Sbjct: 1  MGVAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR P+SNEEIEAILLGGCI
Sbjct: 61 KRTPMSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. ExPASy TrEMBL
Match: A0A1S3AUJ6 (uncharacterized protein LOC103482844 OS=Cucumis melo OX=3656 GN=LOC103482844 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 1.33e-48
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KRIPLSNEEIEAILLGGCI
Sbjct: 61 KRIPLSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. ExPASy TrEMBL
Match: A0A0A0KMD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148700 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 2.13e-45
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRH SSSGSTSKTPSS+GGDDH+FFSSLEKDASKTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHLSSSGSTSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR PLSNEEIEAILLGGCI
Sbjct: 61 KRTPLSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. ExPASy TrEMBL
Match: A0A6J1K8D8 (uncharacterized protein LOC111491585 OS=Cucurbita maxima OX=3661 GN=LOC111491585 PE=4 SV=1)

HSP 1 Score: 123 bits (308), Expect = 5.05e-35
Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MG AQA+KRIPRIKFPKRHP+ SGSTS+TP+S G DD + F SL + ASKT+GGKASLQP
Sbjct: 1  MGVAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR P+SNEEIEAILLGGCI
Sbjct: 61 KRTPMSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. ExPASy TrEMBL
Match: A0A6J1H0Q6 (uncharacterized protein LOC111459363 OS=Cucurbita moschata OX=3662 GN=LOC111459363 PE=4 SV=1)

HSP 1 Score: 123 bits (308), Expect = 5.05e-35
Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MG AQA+KRIPRIKFPKRHP+ SGSTS+TP+S G DD + F SL + ASKT+GGKASLQP
Sbjct: 1  MGVAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR P+SNEEIEAILLGGCI
Sbjct: 61 KRTPMSNEEIEAILLGGCI 79

[Close]

BLAST of MELO.jh021336.1 vs. ExPASy TrEMBL
Match: A0A6J1DS43 (uncharacterized protein LOC111023342 OS=Momordica charantia OX=3673 GN=LOC111023342 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 9.26e-33
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRHP+ SGSTS+TPS+ G DD + FS+   +  KTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFST--GNVLKTVGGKASLQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 79
          KR P+SNEEIEA+LLGGCI
Sbjct: 61 KRTPMSNEEIEAVLLGGCI 77

[Close]

BLAST of MELO.jh021336.1 vs. TAIR 10
Match: AT4G23885.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 4.7e-17
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60
          M     +KRIPRIKFP+RH + S S  K+  +N  D  +FFS+L  +  KT GGKAS QP
Sbjct: 1  MNVVHGLKRIPRIKFPQRHINPSASEGKSQVANEADT-LFFSNL-NNIQKTTGGKASSQP 60

Query: 61 KRIPLSNEEIEAILLGGCI 80
          KR P+SNEE+EAILLGGCI
Sbjct: 61 KRTPVSNEEMEAILLGGCI 77

[Close]

BLAST of MELO.jh021336.1 vs. TAIR 10
Match: AT5G24165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 2.4e-13
Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 7  IKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTV--GGKASLQPKRIP 66
          ++RIPRIKFP+RH  SSGS     S +G   ++  SS    A K    GGKASLQPKR P
Sbjct: 1  MRRIPRIKFPQRHSISSGSGPAPGSVSGVKKNVTASSDVPAAPKNTADGGKASLQPKRTP 60

Query: 67 LSNEEIEAILLGGCI 80
          +S++EIE+I+LGGCI
Sbjct: 61 VSDKEIESIMLGGCI 75

The following BLAST results are available for this feature:

BLAST of MELO.jh021336.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437426.1	2.74e-48	100.00	PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo]	[more]
XP_004143853.1	4.39e-45	94.94	uncharacterized protein LOC101205349 [Cucumis sativus]	[more]
XP_038875405.1	2.87e-41	89.87	uncharacterized protein LOC120067868 [Benincasa hispida]	[more]
XP_023534508.1	4.42e-36	78.48	uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo] >KAG6605594.1 ...	[more]
XP_022958002.1	1.04e-34	77.22	uncharacterized protein LOC111459363 [Cucurbita moschata] >XP_022996319.1 unchar...	[more]

BLAST of MELO.jh021336.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh021336.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUJ6	1.33e-48	100.00	uncharacterized protein LOC103482844 OS=Cucumis melo OX=3656 GN=LOC103482844 PE=...	[more]
A0A0A0KMD8	2.13e-45	94.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148700 PE=4 SV=1	[more]
A0A6J1K8D8	5.05e-35	77.22	uncharacterized protein LOC111491585 OS=Cucurbita maxima OX=3661 GN=LOC111491585...	[more]
A0A6J1H0Q6	5.05e-35	77.22	uncharacterized protein LOC111459363 OS=Cucurbita moschata OX=3662 GN=LOC1114593...	[more]
A0A6J1DS43	9.26e-33	75.95	uncharacterized protein LOC111023342 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of MELO.jh021336.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23885.1	4.7e-17	58.23	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G24165.1	2.4e-13	54.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..38
None	No IPR available	PANTHER	PTHR35751	FAMILY NOT NAMED	coord: 2..79
None	No IPR available	PANTHER	PTHR35751:SF3	OS06G0530200 PROTEIN	coord: 2..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh021336.1.t1	MELO.jh021336.1.t1	mRNA